ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf100k19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001057904.1| Oryza sativa (japonica cultivar-group) Os03g0764600 (Os03g0764600) mRNA, complete cds Length = 1496 Score = 212 bits (107), Expect = 2e-51 Identities = 170/191 (89%) Strand = Plus / Plus Query: 763 cagcagcagcaagcgaggaaggcgcggcggtgctggtcgccggagctgcaccgccagttc 822 ||||||||||| ||||||||| || |||||||||||||||||||||| ||||| |||||| Sbjct: 792 cagcagcagcaggcgaggaagtcgaggcggtgctggtcgccggagcttcaccggcagttc 851 Query: 823 gtcactgccctgcaccaactcggtgggccccaagttgctactccaaagcaaatcagggag 882 ||| | ||| |||| || |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 852 gtcgccgccttgcagcagctcggtggcccccaagttgctactccaaagcaaatcagggag 911 Query: 883 ttgatgaaggtggatggcctgaccaatgatgaagtgaagagccatctccagaaataccgt 942 |||||||||| ||||| || ||||| || |||||||| |||||||||||||| || || Sbjct: 912 gtgatgaaggttgatgggctcaccaacgacgaagtgaaaagccatctccagaagtatcgg 971 Query: 943 ctgcacaaccg 953 ||||||||||| Sbjct: 972 ctgcacaaccg 982 Score = 81.8 bits (41), Expect = 6e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 233 gcaagatcgaggtgttccggcgcgagctccccctctgcgcacgcctcctcgctgacgtga 292 ||||||||||| ||||| ||||||||||||| |||||||| ||||||||||| ||||||| Sbjct: 295 gcaagatcgagatgttcaggcgcgagctcccgctctgcgcccgcctcctcgccgacgtga 354 Query: 293 t 293 | Sbjct: 355 t 355 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 370 ggcgacaagagcaactggatgagcaccgcgcagctctgg 408 |||||||||| || |||||||||||||||||||||||| Sbjct: 426 ggcgacaagacgaaatggatgagcaccgcgcagctctgg 464 Score = 48.1 bits (24), Expect = 0.084 Identities = 30/32 (93%) Strand = Plus / Plus Query: 124 gatttgagcctggatttgaagatgttcgcggc 155 |||||||||||||| |||||||||||||||| Sbjct: 177 gatttgagcctggacctgaagatgttcgcggc 208
>dbj|AK105625.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C11, full insert sequence Length = 1496 Score = 212 bits (107), Expect = 2e-51 Identities = 170/191 (89%) Strand = Plus / Plus Query: 763 cagcagcagcaagcgaggaaggcgcggcggtgctggtcgccggagctgcaccgccagttc 822 ||||||||||| ||||||||| || |||||||||||||||||||||| ||||| |||||| Sbjct: 792 cagcagcagcaggcgaggaagtcgaggcggtgctggtcgccggagcttcaccggcagttc 851 Query: 823 gtcactgccctgcaccaactcggtgggccccaagttgctactccaaagcaaatcagggag 882 ||| | ||| |||| || |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 852 gtcgccgccttgcagcagctcggtggcccccaagttgctactccaaagcaaatcagggag 911 Query: 883 ttgatgaaggtggatggcctgaccaatgatgaagtgaagagccatctccagaaataccgt 942 |||||||||| ||||| || ||||| || |||||||| |||||||||||||| || || Sbjct: 912 gtgatgaaggttgatgggctcaccaacgacgaagtgaaaagccatctccagaagtatcgg 971 Query: 943 ctgcacaaccg 953 ||||||||||| Sbjct: 972 ctgcacaaccg 982 Score = 81.8 bits (41), Expect = 6e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 233 gcaagatcgaggtgttccggcgcgagctccccctctgcgcacgcctcctcgctgacgtga 292 ||||||||||| ||||| ||||||||||||| |||||||| ||||||||||| ||||||| Sbjct: 295 gcaagatcgagatgttcaggcgcgagctcccgctctgcgcccgcctcctcgccgacgtga 354 Query: 293 t 293 | Sbjct: 355 t 355 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 370 ggcgacaagagcaactggatgagcaccgcgcagctctgg 408 |||||||||| || |||||||||||||||||||||||| Sbjct: 426 ggcgacaagacgaaatggatgagcaccgcgcagctctgg 464 Score = 48.1 bits (24), Expect = 0.084 Identities = 30/32 (93%) Strand = Plus / Plus Query: 124 gatttgagcctggatttgaagatgttcgcggc 155 |||||||||||||| |||||||||||||||| Sbjct: 177 gatttgagcctggacctgaagatgttcgcggc 208
>ref|NM_001065305.1| Oryza sativa (japonica cultivar-group) Os07g0119300 (Os07g0119300) mRNA, complete cds Length = 1469 Score = 196 bits (99), Expect = 1e-46 Identities = 168/191 (87%) Strand = Plus / Plus Query: 763 cagcagcagcaagcgaggaaggcgcggcggtgctggtcgccggagctgcaccgccagttc 822 ||||||||||| ||||||||| || ||||||||||||||||||| || |||||| ||||| Sbjct: 773 cagcagcagcaggcgaggaagacgaggcggtgctggtcgccggacctccaccgcaagttc 832 Query: 823 gtcactgccctgcaccaactcggtgggccccaagttgctactccaaagcaaatcagggag 882 ||| | ||| |||| ||||||||||| || |||||||| ||||||||||||||||||||| Sbjct: 833 gtcgccgccttgcagcaactcggtggccctcaagttgccactccaaagcaaatcagggag 892 Query: 883 ttgatgaaggtggatggcctgaccaatgatgaagtgaagagccatctccagaaataccgt 942 |||||||||||||||| ||||| ||||| || || || |||||||| ||||| ||||| Sbjct: 893 ctgatgaaggtggatggactgacaaatgacgaggtcaaaagccatcttcagaagtaccgc 952 Query: 943 ctgcacaaccg 953 ||||||||||| Sbjct: 953 ctgcacaaccg 963 Score = 135 bits (68), Expect = 5e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 191 ccgccatggacgactgtatccggaggctggaggaggagaagagcaagatcgaggtgttcc 250 ||||||||| ||||| ||||||||||| |||||||||| | ||||||||||||| |||| Sbjct: 222 ccgccatgggtgactgcatccggaggctcgaggaggagatgggcaagatcgaggtcttcc 281 Query: 251 ggcgcgagctccccctctgcgcacgcctcctcgctgacgtgattgatgtgat 302 | ||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 282 gccgcgagctccccctctgcgtccgcctcctcgccgacgtgattgatgtgat 333 Score = 81.8 bits (41), Expect = 6e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 370 ggcgacaagagcaactggatgagcaccgcgcagctctggac 410 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 ggcgacaagagcaactggatgagcaccgcgcagctctggac 432 Score = 73.8 bits (37), Expect = 1e-09 Identities = 52/57 (91%) Strand = Plus / Plus Query: 1101 gacggtcagcggcgaggaagaagatggcagatccgagagctatggctggaaatgatc 1157 |||||||||| ||||||| || |||||||| || ||||||||||||||||||||||| Sbjct: 1123 gacggtcagctgcgaggaggaggatggcaggtctgagagctatggctggaaatgatc 1179 Score = 48.1 bits (24), Expect = 0.084 Identities = 40/44 (90%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 1256 ttgtatgcagggagatcaagccttgagtgctttgagatgaaact 1299 |||||| ||| |||||| |||||||||||| ||||||||||||| Sbjct: 1305 ttgtatacagtgagatcgagccttgagtgc-ttgagatgaaact 1347 Score = 46.1 bits (23), Expect = 0.33 Identities = 32/35 (91%) Strand = Plus / Plus Query: 128 tgagcctggatttgaagatgttcgcggccaagagc 162 ||||||||||| | ||||||||||| ||||||||| Sbjct: 153 tgagcctggatctcaagatgttcgccgccaagagc 187 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1016 ctcaggagcaaagcagctcccagtc 1040 |||| |||||||||||||||||||| Sbjct: 1032 ctcaagagcaaagcagctcccagtc 1056
>dbj|AK070421.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048M12, full insert sequence Length = 1473 Score = 196 bits (99), Expect = 1e-46 Identities = 168/191 (87%) Strand = Plus / Plus Query: 763 cagcagcagcaagcgaggaaggcgcggcggtgctggtcgccggagctgcaccgccagttc 822 ||||||||||| ||||||||| || ||||||||||||||||||| || |||||| ||||| Sbjct: 777 cagcagcagcaggcgaggaagacgaggcggtgctggtcgccggacctccaccgcaagttc 836 Query: 823 gtcactgccctgcaccaactcggtgggccccaagttgctactccaaagcaaatcagggag 882 ||| | ||| |||| ||||||||||| || |||||||| ||||||||||||||||||||| Sbjct: 837 gtcgccgccttgcagcaactcggtggccctcaagttgccactccaaagcaaatcagggag 896 Query: 883 ttgatgaaggtggatggcctgaccaatgatgaagtgaagagccatctccagaaataccgt 942 |||||||||||||||| ||||| ||||| || || || |||||||| ||||| ||||| Sbjct: 897 ctgatgaaggtggatggactgacaaatgacgaggtcaaaagccatcttcagaagtaccgc 956 Query: 943 ctgcacaaccg 953 ||||||||||| Sbjct: 957 ctgcacaaccg 967 Score = 135 bits (68), Expect = 5e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 191 ccgccatggacgactgtatccggaggctggaggaggagaagagcaagatcgaggtgttcc 250 ||||||||| ||||| ||||||||||| |||||||||| | ||||||||||||| |||| Sbjct: 226 ccgccatgggtgactgcatccggaggctcgaggaggagatgggcaagatcgaggtcttcc 285 Query: 251 ggcgcgagctccccctctgcgcacgcctcctcgctgacgtgattgatgtgat 302 | ||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 286 gccgcgagctccccctctgcgtccgcctcctcgccgacgtgattgatgtgat 337 Score = 81.8 bits (41), Expect = 6e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 370 ggcgacaagagcaactggatgagcaccgcgcagctctggac 410 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 ggcgacaagagcaactggatgagcaccgcgcagctctggac 436 Score = 73.8 bits (37), Expect = 1e-09 Identities = 52/57 (91%) Strand = Plus / Plus Query: 1101 gacggtcagcggcgaggaagaagatggcagatccgagagctatggctggaaatgatc 1157 |||||||||| ||||||| || |||||||| || ||||||||||||||||||||||| Sbjct: 1127 gacggtcagctgcgaggaggaggatggcaggtctgagagctatggctggaaatgatc 1183 Score = 48.1 bits (24), Expect = 0.084 Identities = 40/44 (90%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 1256 ttgtatgcagggagatcaagccttgagtgctttgagatgaaact 1299 |||||| ||| |||||| |||||||||||| ||||||||||||| Sbjct: 1309 ttgtatacagtgagatcgagccttgagtgc-ttgagatgaaact 1351 Score = 46.1 bits (23), Expect = 0.33 Identities = 32/35 (91%) Strand = Plus / Plus Query: 128 tgagcctggatttgaagatgttcgcggccaagagc 162 ||||||||||| | ||||||||||| ||||||||| Sbjct: 157 tgagcctggatctcaagatgttcgccgccaagagc 191 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1016 ctcaggagcaaagcagctcccagtc 1040 |||| |||||||||||||||||||| Sbjct: 1036 ctcaagagcaaagcagctcccagtc 1060
>gb|BT016414.1| Zea mays clone Contig247 mRNA sequence Length = 1385 Score = 184 bits (93), Expect = 6e-43 Identities = 228/273 (83%) Strand = Plus / Plus Query: 768 gcagcaagcgaggaaggcgcggcggtgctggtcgccggagctgcaccgccagttcgtcac 827 |||||| |||||||| || ||||| |||||||| |||||||||| |||||||||||| | Sbjct: 718 gcagcaggcgaggaaagctcggcgttgctggtccacggagctgcatcgccagttcgtcgc 777 Query: 828 tgccctgcaccaactcggtgggccccaagttgctactccaaagcaaatcagggagttgat 887 ||| || |||| |||||||| ||||||||||| || |||||||| ||||||||| |||| Sbjct: 778 cgccttgaaccagctcggtggcccccaagttgccaccccaaagcagatcagggagctgat 837 Query: 888 gaaggtggatggcctgaccaatgatgaagtgaagagccatctccagaaataccgtctgca 947 ||||||||| ||||| || || || |||||||| ||||| || ||||||||||| ||||| Sbjct: 838 gaaggtggacggcctcacaaacgacgaagtgaaaagccaccttcagaaataccggctgca 897 Query: 948 caaccgaagggcgccaggatctccggtagccaaccggccgatcgtgctcatgggagggct 1007 |||||| ||||||||||| || || | | || ||| |||||||| |||||||||| Sbjct: 898 caaccggagggcgccagggtccggcgtggtgagccagcccatcgtgctggtgggagggct 957 Query: 1008 ctggataactcaggagcaaagcagctcccagtc 1040 ||||| | ||||||||||||||||| ||||| Sbjct: 958 gtggattccgcaggagcaaagcagctcgcagtc 990 Score = 75.8 bits (38), Expect = 4e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 181 gcgccggcggccgccatggacgactgtatccggaggctggaggaggagaagagcaagatc 240 ||||||||| | | |||||||| ||| ||||| | || ||||||||| | |||||||| Sbjct: 170 gcgccggcgccggacatggacgcctgcatccgccgcctcgaggaggagcggggcaagatc 229 Query: 241 gaggtgttccggcgcgagctccccctctgcgcacgcctcctcgctgacgtgattgatgtg 300 ||| ||||| ||| ||||| || |||||||| ||||||||||| |||||||| |||||| Sbjct: 230 gagatgttcaagcgggagctgccgctctgcgcgcgcctcctcgcagacgtgatcgatgtg 289 Query: 301 at 302 || Sbjct: 290 at 291 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 373 gacaagagcaactggatgagcaccgcgcagctctggaccggcgatt 418 ||||||||||| |||||||||| ||||||||||||||||| |||| Sbjct: 341 gacaagagcaaggggatgagcacggcgcagctctggaccggagatt 386 Score = 60.0 bits (30), Expect = 2e-05 Identities = 71/84 (84%), Gaps = 3/84 (3%) Strand = Plus / Plus Query: 489 cggcgctgtcttgccgttcaaggc---cgtgggctccggtgccccggcgttcgcgccgcc 545 ||||||| |||||||| ||||||| |||||||||||| || |||||||||||||||| Sbjct: 463 cggcgctttcttgccgctcaaggctgccgtgggctccggcgcgccggcgttcgcgccgct 522 Query: 546 gagtttgaggaaggacgacaaggc 569 | ||||| | |||||||||||| Sbjct: 523 cggcttgagaatggacgacaaggc 546 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 1105 gtcagcggcgaggaagaagatggcagatccgagagctatggctggaaatgat 1156 |||||| ||||||| ||||| || | ||||||||||||||||||||||||| Sbjct: 1055 gtcagctgcgaggaggaagacggacggtccgagagctatggctggaaatgat 1106 Score = 50.1 bits (25), Expect = 0.021 Identities = 31/33 (93%) Strand = Plus / Plus Query: 106 gagatcggcatgggcgcagatttgagcctggat 138 |||||||| |||||||| ||||||||||||||| Sbjct: 86 gagatcgggatgggcgccgatttgagcctggat 118
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 109 bits (55), Expect = 3e-20 Identities = 88/99 (88%) Strand = Plus / Plus Query: 191 ccgccatggacgactgtatccggaggctggaggaggagaagagcaagatcgaggtgttcc 250 ||||||||| ||||| ||||||||||| |||||||||| | ||||||||||||| |||| Sbjct: 1045267 ccgccatgggtgactgcatccggaggctcgaggaggagatgggcaagatcgaggtcttcc 1045326 Query: 251 ggcgcgagctccccctctgcgcacgcctcctcgctgacg 289 | ||||||||||||||||||| ||||||||||| |||| Sbjct: 1045327 gccgcgagctccccctctgcgtccgcctcctcgccgacg 1045365 Score = 91.7 bits (46), Expect = 6e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 763 cagcagcagcaagcgaggaaggcgcggcggtgctggtcgccggagctgcaccgccagttc 822 ||||||||||| ||||||||| || ||||||||||||||||||| || |||||| ||||| Sbjct: 1045999 cagcagcagcaggcgaggaagacgaggcggtgctggtcgccggacctccaccgcaagttc 1046058 Query: 823 gtcactgccctgcaccaactcggtgg 848 ||| | ||| |||| ||||||||||| Sbjct: 1046059 gtcgccgccttgcagcaactcggtgg 1046084 Score = 85.7 bits (43), Expect = 4e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 855 agttgctactccaaagcaaatcagggagttgatgaaggtggatggcctgaccaatgatga 914 |||||| ||||||||||||||||||||| |||||||||||||||| ||||| ||||| || Sbjct: 1046236 agttgccactccaaagcaaatcagggagctgatgaaggtggatggactgacaaatgacga 1046295 Query: 915 agtgaagagccatct 929 || || |||||||| Sbjct: 1046296 ggtcaaaagccatct 1046310 Score = 81.8 bits (41), Expect = 6e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 370 ggcgacaagagcaactggatgagcaccgcgcagctctggac 410 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1045528 ggcgacaagagcaactggatgagcaccgcgcagctctggac 1045568 Score = 73.8 bits (37), Expect = 1e-09 Identities = 52/57 (91%) Strand = Plus / Plus Query: 1101 gacggtcagcggcgaggaagaagatggcagatccgagagctatggctggaaatgatc 1157 |||||||||| ||||||| || |||||||| || ||||||||||||||||||||||| Sbjct: 1046626 gacggtcagctgcgaggaggaggatggcaggtctgagagctatggctggaaatgatc 1046682 Score = 48.1 bits (24), Expect = 0.084 Identities = 40/44 (90%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 1256 ttgtatgcagggagatcaagccttgagtgctttgagatgaaact 1299 |||||| ||| |||||| |||||||||||| ||||||||||||| Sbjct: 1046808 ttgtatacagtgagatcgagccttgagtgc-ttgagatgaaact 1046850 Score = 46.1 bits (23), Expect = 0.33 Identities = 32/35 (91%) Strand = Plus / Plus Query: 128 tgagcctggatttgaagatgttcgcggccaagagc 162 ||||||||||| | ||||||||||| ||||||||| Sbjct: 1045198 tgagcctggatctcaagatgttcgccgccaagagc 1045232 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 755 cagcacaacagcagcagcaagc 776 |||||||||||||||||||||| Sbjct: 5647307 cagcacaacagcagcagcaagc 5647286 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 755 cagcacaacagcagcagcaagc 776 |||||||||||||||||||||| Sbjct: 21943492 cagcacaacagcagcagcaagc 21943513 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1016 ctcaggagcaaagcagctcccagtc 1040 |||| |||||||||||||||||||| Sbjct: 1046535 ctcaagagcaaagcagctcccagtc 1046559
>dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022B05 Length = 151317 Score = 109 bits (55), Expect = 3e-20 Identities = 88/99 (88%) Strand = Plus / Plus Query: 191 ccgccatggacgactgtatccggaggctggaggaggagaagagcaagatcgaggtgttcc 250 ||||||||| ||||| ||||||||||| |||||||||| | ||||||||||||| |||| Sbjct: 42855 ccgccatgggtgactgcatccggaggctcgaggaggagatgggcaagatcgaggtcttcc 42914 Query: 251 ggcgcgagctccccctctgcgcacgcctcctcgctgacg 289 | ||||||||||||||||||| ||||||||||| |||| Sbjct: 42915 gccgcgagctccccctctgcgtccgcctcctcgccgacg 42953 Score = 91.7 bits (46), Expect = 6e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 763 cagcagcagcaagcgaggaaggcgcggcggtgctggtcgccggagctgcaccgccagttc 822 ||||||||||| ||||||||| || ||||||||||||||||||| || |||||| ||||| Sbjct: 43587 cagcagcagcaggcgaggaagacgaggcggtgctggtcgccggacctccaccgcaagttc 43646 Query: 823 gtcactgccctgcaccaactcggtgg 848 ||| | ||| |||| ||||||||||| Sbjct: 43647 gtcgccgccttgcagcaactcggtgg 43672 Score = 85.7 bits (43), Expect = 4e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 855 agttgctactccaaagcaaatcagggagttgatgaaggtggatggcctgaccaatgatga 914 |||||| ||||||||||||||||||||| |||||||||||||||| ||||| ||||| || Sbjct: 43824 agttgccactccaaagcaaatcagggagctgatgaaggtggatggactgacaaatgacga 43883 Query: 915 agtgaagagccatct 929 || || |||||||| Sbjct: 43884 ggtcaaaagccatct 43898 Score = 81.8 bits (41), Expect = 6e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 370 ggcgacaagagcaactggatgagcaccgcgcagctctggac 410 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 43116 ggcgacaagagcaactggatgagcaccgcgcagctctggac 43156 Score = 73.8 bits (37), Expect = 1e-09 Identities = 52/57 (91%) Strand = Plus / Plus Query: 1101 gacggtcagcggcgaggaagaagatggcagatccgagagctatggctggaaatgatc 1157 |||||||||| ||||||| || |||||||| || ||||||||||||||||||||||| Sbjct: 44214 gacggtcagctgcgaggaggaggatggcaggtctgagagctatggctggaaatgatc 44270 Score = 48.1 bits (24), Expect = 0.084 Identities = 40/44 (90%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 1256 ttgtatgcagggagatcaagccttgagtgctttgagatgaaact 1299 |||||| ||| |||||| |||||||||||| ||||||||||||| Sbjct: 44396 ttgtatacagtgagatcgagccttgagtgc-ttgagatgaaact 44438 Score = 46.1 bits (23), Expect = 0.33 Identities = 32/35 (91%) Strand = Plus / Plus Query: 128 tgagcctggatttgaagatgttcgcggccaagagc 162 ||||||||||| | ||||||||||| ||||||||| Sbjct: 42786 tgagcctggatctcaagatgttcgccgccaagagc 42820 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1016 ctcaggagcaaagcagctcccagtc 1040 |||| |||||||||||||||||||| Sbjct: 44123 ctcaagagcaaagcagctcccagtc 44147
>ref|NM_001073688.1| Oryza sativa (japonica cultivar-group) Os12g0586300 (Os12g0586300) mRNA, complete cds Length = 1188 Score = 103 bits (52), Expect = 2e-18 Identities = 133/160 (83%) Strand = Plus / Plus Query: 790 cggtgctggtcgccggagctgcaccgccagttcgtcactgccctgcaccaactcggtggg 849 ||||||||||| |||||||| ||||||| ||||||| | || || || | |||||||| Sbjct: 748 cggtgctggtctccggagctccaccgccggttcgtcgccgcgctccagcgcctcggtggc 807 Query: 850 ccccaagttgctactccaaagcaaatcagggagttgatgaaggtggatggcctgaccaat 909 || |||| ||| ||||| ||||| || |||||| |||||||||| |||||||| || ||| Sbjct: 808 ccacaagctgcaactcccaagcagattagggagctgatgaaggttgatggcctcactaat 867 Query: 910 gatgaagtgaagagccatctccagaaataccgtctgcaca 949 |||||||| || ||||| || ||||| ||||| ||||||| Sbjct: 868 gatgaagtcaaaagccacctgcagaagtaccggctgcaca 907 Score = 52.0 bits (26), Expect = 0.005 Identities = 71/86 (82%) Strand = Plus / Plus Query: 208 atccggaggctggaggaggagaagagcaagatcgaggtgttccggcgcgagctccccctc 267 |||||||| || |||| |||||| |||||| ||||||||||| |||||||||||| || Sbjct: 181 atccggagcctcgaggccgagaaggccaagatggaggtgttccgccgcgagctccccatc 240 Query: 268 tgcgcacgcctcctcgctgacgtgat 293 ||| | |||| |||| |||||||| Sbjct: 241 agcgtccacctcatcgccgacgtgat 266
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence Length = 159091 Score = 101 bits (51), Expect = 7e-18 Identities = 72/79 (91%) Strand = Plus / Minus Query: 855 agttgctactccaaagcaaatcagggagttgatgaaggtggatggcctgaccaatgatga 914 |||||||||||||||||||||||||||| |||||||||| ||||| || ||||| || || Sbjct: 154611 agttgctactccaaagcaaatcagggaggtgatgaaggttgatgggctcaccaacgacga 154552 Query: 915 agtgaagagccatctccag 933 |||||| |||||||||||| Sbjct: 154551 agtgaaaagccatctccag 154533 Score = 99.6 bits (50), Expect = 3e-17 Identities = 83/94 (88%) Strand = Plus / Minus Query: 763 cagcagcagcaagcgaggaaggcgcggcggtgctggtcgccggagctgcaccgccagttc 822 ||||||||||| ||||||||| || |||||||||||||||||||||| ||||| |||||| Sbjct: 154795 cagcagcagcaggcgaggaagtcgaggcggtgctggtcgccggagcttcaccggcagttc 154736 Query: 823 gtcactgccctgcaccaactcggtgggccccaag 856 ||| | ||| |||| || |||||||| ||||||| Sbjct: 154735 gtcgccgccttgcagcagctcggtggcccccaag 154702 Score = 73.8 bits (37), Expect = 1e-09 Identities = 52/57 (91%) Strand = Plus / Minus Query: 233 gcaagatcgaggtgttccggcgcgagctccccctctgcgcacgcctcctcgctgacg 289 ||||||||||| ||||| ||||||||||||| |||||||| ||||||||||| |||| Sbjct: 155520 gcaagatcgagatgttcaggcgcgagctcccgctctgcgcccgcctcctcgccgacg 155464 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Minus Query: 370 ggcgacaagagcaactggatgagcaccgcgcagctctgg 408 |||||||||| || |||||||||||||||||||||||| Sbjct: 155288 ggcgacaagacgaaatggatgagcaccgcgcagctctgg 155250 Score = 48.1 bits (24), Expect = 0.084 Identities = 30/32 (93%) Strand = Plus / Minus Query: 124 gatttgagcctggatttgaagatgttcgcggc 155 |||||||||||||| |||||||||||||||| Sbjct: 155638 gatttgagcctggacctgaagatgttcgcggc 155607
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 101 bits (51), Expect = 7e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 855 agttgctactccaaagcaaatcagggagttgatgaaggtggatggcctgaccaatgatga 914 |||||||||||||||||||||||||||| |||||||||| ||||| || ||||| || || Sbjct: 31431705 agttgctactccaaagcaaatcagggaggtgatgaaggttgatgggctcaccaacgacga 31431764 Query: 915 agtgaagagccatctccag 933 |||||| |||||||||||| Sbjct: 31431765 agtgaaaagccatctccag 31431783 Score = 99.6 bits (50), Expect = 3e-17 Identities = 83/94 (88%) Strand = Plus / Plus Query: 763 cagcagcagcaagcgaggaaggcgcggcggtgctggtcgccggagctgcaccgccagttc 822 ||||||||||| ||||||||| || |||||||||||||||||||||| ||||| |||||| Sbjct: 31431521 cagcagcagcaggcgaggaagtcgaggcggtgctggtcgccggagcttcaccggcagttc 31431580 Query: 823 gtcactgccctgcaccaactcggtgggccccaag 856 ||| | ||| |||| || |||||||| ||||||| Sbjct: 31431581 gtcgccgccttgcagcagctcggtggcccccaag 31431614 Score = 73.8 bits (37), Expect = 1e-09 Identities = 52/57 (91%) Strand = Plus / Plus Query: 233 gcaagatcgaggtgttccggcgcgagctccccctctgcgcacgcctcctcgctgacg 289 ||||||||||| ||||| ||||||||||||| |||||||| ||||||||||| |||| Sbjct: 31430796 gcaagatcgagatgttcaggcgcgagctcccgctctgcgcccgcctcctcgccgacg 31430852 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Minus Query: 779 ggaaggcgcggcggtgctggtcgccggagctgcaccgccagttcgtc 825 ||||||| |||| ||||||||||||||||| ||||||| ||||||| Sbjct: 7436049 ggaaggccaggcgatgctggtcgccggagctccaccgccggttcgtc 7436003 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 370 ggcgacaagagcaactggatgagcaccgcgcagctctgg 408 |||||||||| || |||||||||||||||||||||||| Sbjct: 31431028 ggcgacaagacgaaatggatgagcaccgcgcagctctgg 31431066 Score = 48.1 bits (24), Expect = 0.084 Identities = 30/32 (93%) Strand = Plus / Plus Query: 124 gatttgagcctggatttgaagatgttcgcggc 155 |||||||||||||| |||||||||||||||| Sbjct: 31430678 gatttgagcctggacctgaagatgttcgcggc 31430709
>ref|NM_001048718.1| Oryza sativa (japonica cultivar-group) Os01g0176700 (Os01g0176700) mRNA, partial cds Length = 1947 Score = 89.7 bits (45), Expect = 2e-14 Identities = 129/157 (82%) Strand = Plus / Plus Query: 779 ggaaggcgcggcggtgctggtcgccggagctgcaccgccagttcgtcactgccctgcacc 838 |||||||||| || ||||||||||||||||||||||||| ||||||| ||| || || Sbjct: 706 ggaaggcgcgccgttgctggtcgccggagctgcaccgccgcttcgtcaatgctcttcaga 765 Query: 839 aactcggtgggccccaagttgctactccaaagcaaatcagggagttgatgaaggtggatg 898 ||||| || ||||||| || || || ||||| || | ||| |||||||||| |||| Sbjct: 766 tcctcggcggcgcccaagtggcgaccccgaagcagattcgcgagctgatgaaggttgatg 825 Query: 899 gcctgaccaatgatgaagtgaagagccatctccagaa 935 | ||||||||||||| ||||| |||||||||||||| Sbjct: 826 gattgaccaatgatgaggtgaaaagccatctccagaa 862
>dbj|AK109808.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-G07, full insert sequence Length = 1947 Score = 89.7 bits (45), Expect = 2e-14 Identities = 129/157 (82%) Strand = Plus / Plus Query: 779 ggaaggcgcggcggtgctggtcgccggagctgcaccgccagttcgtcactgccctgcacc 838 |||||||||| || ||||||||||||||||||||||||| ||||||| ||| || || Sbjct: 706 ggaaggcgcgccgttgctggtcgccggagctgcaccgccgcttcgtcaatgctcttcaga 765 Query: 839 aactcggtgggccccaagttgctactccaaagcaaatcagggagttgatgaaggtggatg 898 ||||| || ||||||| || || || ||||| || | ||| |||||||||| |||| Sbjct: 766 tcctcggcggcgcccaagtggcgaccccgaagcagattcgcgagctgatgaaggttgatg 825 Query: 899 gcctgaccaatgatgaagtgaagagccatctccagaa 935 | ||||||||||||| ||||| |||||||||||||| Sbjct: 826 gattgaccaatgatgaggtgaaaagccatctccagaa 862
>ref|NM_101201.1| Arabidopsis thaliana DNA binding / transcription factor (AT1G13300) mRNA, complete cds Length = 1237 Score = 79.8 bits (40), Expect = 2e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 859 gctactccaaagcaaatcagggagttgatgaaggtggatggcctgaccaatgatgaagtg 918 ||||| |||||||||||||||||||| |||||||| ||||| | |||||||||||||| Sbjct: 704 gctacgccaaagcaaatcagggagtttatgaaggttgatgggttaaccaatgatgaagtt 763 Query: 919 aagagccatctccagaaata 938 || |||||| | |||||||| Sbjct: 764 aaaagccatttacagaaata 783
>gb|AY124865.1| Arabidopsis thaliana At1g13300/T6J4_6 mRNA, complete cds Length = 1035 Score = 79.8 bits (40), Expect = 2e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 859 gctactccaaagcaaatcagggagttgatgaaggtggatggcctgaccaatgatgaagtg 918 ||||| |||||||||||||||||||| |||||||| ||||| | |||||||||||||| Sbjct: 619 gctacgccaaagcaaatcagggagtttatgaaggttgatgggttaaccaatgatgaagtt 678 Query: 919 aagagccatctccagaaata 938 || |||||| | |||||||| Sbjct: 679 aaaagccatttacagaaata 698
>gb|AF367336.1| Arabidopsis thaliana At1g13300/T6J4_6 mRNA, complete cds Length = 1239 Score = 79.8 bits (40), Expect = 2e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 859 gctactccaaagcaaatcagggagttgatgaaggtggatggcctgaccaatgatgaagtg 918 ||||| |||||||||||||||||||| |||||||| ||||| | |||||||||||||| Sbjct: 706 gctacgccaaagcaaatcagggagtttatgaaggttgatgggttaaccaatgatgaagtt 765 Query: 919 aagagccatctccagaaata 938 || |||||| | |||||||| Sbjct: 766 aaaagccatttacagaaata 785
>gb|AC186748.1| Musa acuminata clone MA4_8L21, complete sequence Length = 113519 Score = 77.8 bits (39), Expect = 9e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 859 gctactccaaagcaaatcagggagttgatgaaggtggatggcctgaccaatgatgaagtg 918 |||||||||||||| ||||| || |||||||||||||||| || |||||||||||||| Sbjct: 67934 gctactccaaagcagatcagagaactgatgaaggtggatggtcttaccaatgatgaagtc 67875 Query: 919 aagagccatct 929 || |||||||| Sbjct: 67874 aaaagccatct 67864 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Minus Query: 776 cgaggaaggcgcggcggtgctggtcgccggagctgcaccgcc 817 ||||||| ||| || ||||||||||||| ||||||||||||| Sbjct: 68321 cgaggaaagcgaggaggtgctggtcgccagagctgcaccgcc 68280 Score = 42.1 bits (21), Expect = 5.2 Identities = 45/53 (84%) Strand = Plus / Minus Query: 218 tggaggaggagaagagcaagatcgaggtgttccggcgcgagctccccctctgc 270 |||||||||||| ||| |||||||| | ||| |||||||||||| |||||| Sbjct: 69110 tggaggaggagaggagaaagatcgatgctttcaagcgcgagctccctctctgc 69058
>gb|AC011810.8|AC011810 Arabidopsis thaliana chromosome I BAC T6J4 genomic sequence, complete sequence Length = 103157 Score = 73.8 bits (37), Expect = 1e-09 Identities = 61/69 (88%) Strand = Plus / Plus Query: 859 gctactccaaagcaaatcagggagttgatgaaggtggatggcctgaccaatgatgaagtg 918 ||||| |||||||||||||||||||| |||||||| ||||| | |||||||||||||| Sbjct: 36180 gctacgccaaagcaaatcagggagtttatgaaggttgatgggttaaccaatgatgaagtt 36239 Query: 919 aagagccat 927 || |||||| Sbjct: 36240 aaaagccat 36248
>gb|BT028985.1| Arabidopsis thaliana At4g37180 mRNA, complete cds Length = 1071 Score = 65.9 bits (33), Expect = 4e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 847 gggccccaagttgctactccaaagcaaatcagggagttgatgaaggtggatggcctgacc 906 ||||| ||||||||||| |||||||| || || || |||||||| || ||||| | ||| Sbjct: 694 gggccacaagttgctacaccaaagcagattagagatttgatgaaagttgatggtttaacc 753 Query: 907 aatgatgaagtgaagagccat 927 ||||||||||| ||||||||| Sbjct: 754 aatgatgaagtcaagagccat 774
>ref|NM_119881.2| Arabidopsis thaliana DNA binding / transcription factor (AT4G37180) mRNA, complete cds Length = 1415 Score = 65.9 bits (33), Expect = 4e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 847 gggccccaagttgctactccaaagcaaatcagggagttgatgaaggtggatggcctgacc 906 ||||| ||||||||||| |||||||| || || || |||||||| || ||||| | ||| Sbjct: 778 gggccacaagttgctacaccaaagcagattagagatttgatgaaagttgatggtttaacc 837 Query: 907 aatgatgaagtgaagagccat 927 ||||||||||| ||||||||| Sbjct: 838 aatgatgaagtcaagagccat 858
>ref|NM_179182.1| Arabidopsis thaliana transcription factor (AT4G37180) mRNA, complete cds Length = 1436 Score = 65.9 bits (33), Expect = 4e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 847 gggccccaagttgctactccaaagcaaatcagggagttgatgaaggtggatggcctgacc 906 ||||| ||||||||||| |||||||| || || || |||||||| || ||||| | ||| Sbjct: 799 gggccacaagttgctacaccaaagcagattagagatttgatgaaagttgatggtttaacc 858 Query: 907 aatgatgaagtgaagagccat 927 ||||||||||| ||||||||| Sbjct: 859 aatgatgaagtcaagagccat 879
>gb|AY039841.1| Arabidopsis thaliana AT4g37180/C7A10_180 mRNA, partial cds Length = 1067 Score = 65.9 bits (33), Expect = 4e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 847 gggccccaagttgctactccaaagcaaatcagggagttgatgaaggtggatggcctgacc 906 ||||| ||||||||||| |||||||| || || || |||||||| || ||||| | ||| Sbjct: 731 gggccacaagttgctacaccaaagcagattagagatttgatgaaagttgatggtttaacc 790 Query: 907 aatgatgaagtgaagagccat 927 ||||||||||| ||||||||| Sbjct: 791 aatgatgaagtcaagagccat 811
>emb|BX827391.1|CNS0A2DD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS4ZD10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1377 Score = 65.9 bits (33), Expect = 4e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 847 gggccccaagttgctactccaaagcaaatcagggagttgatgaaggtggatggcctgacc 906 ||||| ||||||||||| |||||||| || || || |||||||| || ||||| | ||| Sbjct: 771 gggccacaagttgctacaccaaagcagattagagatttgatgaaagttgatggtttaacc 830 Query: 907 aatgatgaagtgaagagccat 927 ||||||||||| ||||||||| Sbjct: 831 aatgatgaagtcaagagccat 851
>gb|U62741.1|ATU62741 Arabidopsis thaliana putative cytoskeletal protein mRNA, complete cds Length = 1404 Score = 65.9 bits (33), Expect = 4e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 847 gggccccaagttgctactccaaagcaaatcagggagttgatgaaggtggatggcctgacc 906 ||||| ||||||||||| |||||||| || || || |||||||| || ||||| | ||| Sbjct: 705 gggccacaagttgctacaccaaagcagattagagatttgatgaaagttgatggtttaacc 764 Query: 907 aatgatgaagtgaagagccat 927 ||||||||||| ||||||||| Sbjct: 765 aatgatgaagtcaagagccat 785
>gb|AY661658.1| Sorghum bicolor clone BAC 796all, complete sequence Length = 103167 Score = 63.9 bits (32), Expect = 1e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 777 gaggaaggcgcggcggtgctggtcgccggagctgcaccgccagttcgtcactgccctgca 836 ||||||||| || ||||||||||||| ||||||||||||| ||||||| | |||||||| Sbjct: 61453 gaggaaggccaggaggtgctggtcgcccgagctgcaccgccggttcgtcgccgccctgca 61512 Score = 56.0 bits (28), Expect = 3e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 855 agttgctactccaaagcaaatcagggagttgatgaaggtggatggcctgaccaatgatga 914 |||||| || |||||||| ||||||||| ||||||||||||| || || ||||| || || Sbjct: 61654 agttgcgacgccaaagcagatcagggagctgatgaaggtggacgggctcaccaacgacga 61713 Query: 915 agtgaagagcca 926 || |||||||| Sbjct: 61714 ggtcaagagcca 61725 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 384 ctggatgagcaccgcgcagctctgga 409 |||||||||| ||||||||||||||| Sbjct: 60469 ctggatgagctccgcgcagctctgga 60494
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 63.9 bits (32), Expect = 1e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 779 ggaaggcgcggcggtgctggtcgccggagctgcaccgccagttcgtca 826 |||||||||| || ||||||||||||||||||||||||| ||||||| Sbjct: 3952907 ggaaggcgcgccgttgctggtcgccggagctgcaccgccgcttcgtca 3952954 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 884 tgatgaaggtggatggcctgaccaatgatgaagtgaagagccatctccag 933 |||||||||| ||||| ||||||||||||| ||||| |||||||||||| Sbjct: 3953142 tgatgaaggttgatggattgaccaatgatgaggtgaaaagccatctccag 3953191
>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013F10 Length = 163095 Score = 63.9 bits (32), Expect = 1e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 779 ggaaggcgcggcggtgctggtcgccggagctgcaccgccagttcgtca 826 |||||||||| || ||||||||||||||||||||||||| ||||||| Sbjct: 74811 ggaaggcgcgccgttgctggtcgccggagctgcaccgccgcttcgtca 74858 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 884 tgatgaaggtggatggcctgaccaatgatgaagtgaagagccatctccag 933 |||||||||| ||||| ||||||||||||| ||||| |||||||||||| Sbjct: 75046 tgatgaaggttgatggattgaccaatgatgaggtgaaaagccatctccag 75095
>emb|CT831013.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA128H23, full insert sequence Length = 1603 Score = 60.0 bits (30), Expect = 2e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 868 aagcaaatcagggagttgatgaaggtggatggcctgaccaatgatgaagtgaagagccat 927 ||||| ||| ||||| ||||||||||||||||||| ||||| || || || ||||||||| Sbjct: 967 aagcagatccgggagctgatgaaggtggatggcctcaccaacgacgaggtcaagagccat 1026 Query: 928 ctccagaaataccgtctgcaca 949 | ||||| || ||||| |||| Sbjct: 1027 ttgcagaagtatcgtctacaca 1048
>ref|NM_001053237.1| Oryza sativa (japonica cultivar-group) Os02g0325600 (Os02g0325600) mRNA, complete cds Length = 1691 Score = 60.0 bits (30), Expect = 2e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 868 aagcaaatcagggagttgatgaaggtggatggcctgaccaatgatgaagtgaagagccat 927 ||||| ||| ||||| ||||||||||||||||||| ||||| || || || ||||||||| Sbjct: 1055 aagcagatccgggagctgatgaaggtggatggcctcaccaacgacgaggtcaagagccat 1114 Query: 928 ctccagaaataccgtctgcaca 949 | ||||| || ||||| |||| Sbjct: 1115 ttgcagaagtatcgtctacaca 1136
>dbj|AK101809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066M05, full insert sequence Length = 1694 Score = 60.0 bits (30), Expect = 2e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 868 aagcaaatcagggagttgatgaaggtggatggcctgaccaatgatgaagtgaagagccat 927 ||||| ||| ||||| ||||||||||||||||||| ||||| || || || ||||||||| Sbjct: 1058 aagcagatccgggagctgatgaaggtggatggcctcaccaacgacgaggtcaagagccat 1117 Query: 928 ctccagaaataccgtctgcaca 949 | ||||| || ||||| |||| Sbjct: 1118 ttgcagaagtatcgtctacaca 1139
>dbj|AK064355.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-B01, full insert sequence Length = 1572 Score = 60.0 bits (30), Expect = 2e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 868 aagcaaatcagggagttgatgaaggtggatggcctgaccaatgatgaagtgaagagccat 927 ||||| ||| ||||| ||||||||||||||||||| ||||| || || || ||||||||| Sbjct: 936 aagcagatccgggagctgatgaaggtggatggcctcaccaacgacgaggtcaagagccat 995 Query: 928 ctccagaaataccgtctgcaca 949 | ||||| || ||||| |||| Sbjct: 996 ttgcagaagtatcgtctacaca 1017
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 58.0 bits (29), Expect = 9e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 862 actccaaagcaaatcagggagttgatgaaggtggatggcctgaccaatgatgaagtgaag 921 ||||| ||||| || |||||| |||||||||| |||||||| || ||||||||||| || Sbjct: 24510636 actcccaagcagattagggagctgatgaaggttgatggcctcactaatgatgaagtcaaa 24510695 Query: 922 agcca 926 ||||| Sbjct: 24510696 agcca 24510700 Score = 50.1 bits (25), Expect = 0.021 Identities = 49/57 (85%) Strand = Plus / Plus Query: 208 atccggaggctggaggaggagaagagcaagatcgaggtgttccggcgcgagctcccc 264 |||||||| || |||| |||||| |||||| ||||||||||| |||||||||||| Sbjct: 24508908 atccggagcctcgaggccgagaaggccaagatggaggtgttccgccgcgagctcccc 24508964 Score = 48.1 bits (24), Expect = 0.084 Identities = 33/36 (91%) Strand = Plus / Plus Query: 790 cggtgctggtcgccggagctgcaccgccagttcgtc 825 ||||||||||| |||||||| ||||||| ||||||| Sbjct: 24510330 cggtgctggtctccggagctccaccgccggttcgtc 24510365
>emb|Z99707.1|ATAP21 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 1 Length = 206420 Score = 58.0 bits (29), Expect = 9e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 855 agttgctactccaaagcaaatcagggagttgatgaaggtggatggcctgaccaatgatga 914 ||||||||| |||||||| || || || |||||||| || ||||| | ||||||||||| Sbjct: 62039 agttgctacaccaaagcagattagagatttgatgaaagttgatggtttaaccaatgatga 61980 Query: 915 agtgaagagccat 927 ||| ||||||||| Sbjct: 61979 agtcaagagccat 61967
>emb|AL161590.2|ATCHRIV86 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 86 Length = 198780 Score = 58.0 bits (29), Expect = 9e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 855 agttgctactccaaagcaaatcagggagttgatgaaggtggatggcctgaccaatgatga 914 ||||||||| |||||||| || || || |||||||| || ||||| | ||||||||||| Sbjct: 193195 agttgctacaccaaagcagattagagatttgatgaaagttgatggtttaaccaatgatga 193254 Query: 915 agtgaagagccat 927 ||| ||||||||| Sbjct: 193255 agtcaagagccat 193267
>emb|AL844880.3|CNS08CB3 Oryza sativa chromosome 12, . BAC OSJNBb0049H14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120071 Score = 58.0 bits (29), Expect = 9e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 862 actccaaagcaaatcagggagttgatgaaggtggatggcctgaccaatgatgaagtgaag 921 ||||| ||||| || |||||| |||||||||| |||||||| || ||||||||||| || Sbjct: 81667 actcccaagcagattagggagctgatgaaggttgatggcctcactaatgatgaagtcaaa 81726 Query: 922 agcca 926 ||||| Sbjct: 81727 agcca 81731 Score = 50.1 bits (25), Expect = 0.021 Identities = 49/57 (85%) Strand = Plus / Plus Query: 208 atccggaggctggaggaggagaagagcaagatcgaggtgttccggcgcgagctcccc 264 |||||||| || |||| |||||| |||||| ||||||||||| |||||||||||| Sbjct: 79939 atccggagcctcgaggccgagaaggccaagatggaggtgttccgccgcgagctcccc 79995 Score = 48.1 bits (24), Expect = 0.084 Identities = 33/36 (91%) Strand = Plus / Plus Query: 790 cggtgctggtcgccggagctgcaccgccagttcgtc 825 ||||||||||| |||||||| ||||||| ||||||| Sbjct: 81361 cggtgctggtctccggagctccaccgccggttcgtc 81396
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 56.0 bits (28), Expect = 3e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 868 aagcaaatcagggagttgatgaaggtggatggcctgaccaatgatgaagtgaagagccat 927 ||||| ||| ||||| ||||||||||||||||||| ||||| || || || ||||||||| Sbjct: 13096567 aagcagatccgggagctgatgaaggtggatggcctcaccaacgacgaggtcaagagccat 13096626 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 ggaggctggaggaggagaagag 233 |||||||||||||||||||||| Sbjct: 23599359 ggaggctggaggaggagaagag 23599338
>dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476C12 Length = 157570 Score = 56.0 bits (28), Expect = 3e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 868 aagcaaatcagggagttgatgaaggtggatggcctgaccaatgatgaagtgaagagccat 927 ||||| ||| ||||| ||||||||||||||||||| ||||| || || || ||||||||| Sbjct: 73144 aagcagatccgggagctgatgaaggtggatggcctcaccaacgacgaggtcaagagccat 73203
>ref|NM_126400.2| Arabidopsis thaliana DNA binding / transcription factor (AT2G03500) mRNA, complete cds Length = 1666 Score = 54.0 bits (27), Expect = 0.001 Identities = 69/83 (83%) Strand = Plus / Plus Query: 853 caagttgctactccaaagcaaatcagggagttgatgaaggtggatggcctgaccaatgat 912 ||||| ||||| || || ||||| ||||| | ||||| || ||||| ||||||||||| Sbjct: 985 caagtggctacacctaaacaaataagggaactcatgaaagttgatggtttgaccaatgat 1044 Query: 913 gaagtgaagagccatctccagaa 935 ||||| || |||||||||||||| Sbjct: 1045 gaagtcaaaagccatctccagaa 1067
>gb|AC140027.11| Medicago truncatula clone mth2-5m21, complete sequence Length = 131365 Score = 54.0 bits (27), Expect = 0.001 Identities = 54/63 (85%) Strand = Plus / Plus Query: 865 ccaaagcaaatcagggagttgatgaaggtggatggcctgaccaatgatgaagtgaagagc 924 |||||||||||||| ||| | ||||| || |||||||| || ||||||||||| || ||| Sbjct: 786 ccaaagcaaatcagagaggtaatgaatgttgatggcctcacaaatgatgaagtcaaaagc 845 Query: 925 cat 927 ||| Sbjct: 846 cat 848
>gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0071C04, from chromosome 3, complete sequence Length = 126078 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Minus Query: 779 ggaaggcgcggcggtgctggtcgccggagctgcaccgccagttcgtc 825 ||||||| |||| ||||||||||||||||| ||||||| ||||||| Sbjct: 76769 ggaaggccaggcgatgctggtcgccggagctccaccgccggttcgtc 76723
>gb|AY133630.1| Arabidopsis thaliana At2g03500/T4M8.7 mRNA, complete cds Length = 1299 Score = 54.0 bits (27), Expect = 0.001 Identities = 69/83 (83%) Strand = Plus / Plus Query: 853 caagttgctactccaaagcaaatcagggagttgatgaaggtggatggcctgaccaatgat 912 ||||| ||||| || || ||||| ||||| | ||||| || ||||| ||||||||||| Sbjct: 769 caagtggctacacctaaacaaataagggaactcatgaaagttgatggtttgaccaatgat 828 Query: 913 gaagtgaagagccatctccagaa 935 ||||| || |||||||||||||| Sbjct: 829 gaagtcaaaagccatctccagaa 851
>dbj|AK221662.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL09-70-E23 Length = 1647 Score = 54.0 bits (27), Expect = 0.001 Identities = 69/83 (83%) Strand = Plus / Plus Query: 853 caagttgctactccaaagcaaatcagggagttgatgaaggtggatggcctgaccaatgat 912 ||||| ||||| || || ||||| ||||| | ||||| || ||||| ||||||||||| Sbjct: 956 caagtggctacacctaaacaaataagggaactcatgaaagttgatggtttgaccaatgat 1015 Query: 913 gaagtgaagagccatctccagaa 935 ||||| || |||||||||||||| Sbjct: 1016 gaagtcaaaagccatctccagaa 1038
>gb|AY060559.1| Arabidopsis thaliana At2g03500/T4M8.7 mRNA, complete cds Length = 1636 Score = 54.0 bits (27), Expect = 0.001 Identities = 69/83 (83%) Strand = Plus / Plus Query: 853 caagttgctactccaaagcaaatcagggagttgatgaaggtggatggcctgaccaatgat 912 ||||| ||||| || || ||||| ||||| | ||||| || ||||| ||||||||||| Sbjct: 956 caagtggctacacctaaacaaataagggaactcatgaaagttgatggtttgaccaatgat 1015 Query: 913 gaagtgaagagccatctccagaa 935 ||||| || |||||||||||||| Sbjct: 1016 gaagtcaaaagccatctccagaa 1038
>emb|BX819077.1|CNS0A8Y5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB43ZG06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1285 Score = 54.0 bits (27), Expect = 0.001 Identities = 69/83 (83%) Strand = Plus / Plus Query: 853 caagttgctactccaaagcaaatcagggagttgatgaaggtggatggcctgaccaatgat 912 ||||| ||||| || || ||||| ||||| | ||||| || ||||| ||||||||||| Sbjct: 985 caagtggctacacctaaacaaataagggaactcatgaaagttgatggtttgaccaatgat 1044 Query: 913 gaagtgaagagccatctccagaa 935 ||||| || |||||||||||||| Sbjct: 1045 gaagtcaaaagccatctccagaa 1067
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 50.1 bits (25), Expect = 0.021 Identities = 25/25 (100%) Strand = Plus / Minus Query: 752 agacagcacaacagcagcagcaagc 776 ||||||||||||||||||||||||| Sbjct: 453603 agacagcacaacagcagcagcaagc 453579
>gb|AY023290.1| Oryza sativa microsatellite MRG5615 containing (GGC)X9, closest to marker G148, genomic sequence Length = 227 Score = 50.1 bits (25), Expect = 0.021 Identities = 49/57 (85%) Strand = Plus / Plus Query: 208 atccggaggctggaggaggagaagagcaagatcgaggtgttccggcgcgagctcccc 264 |||||||| || |||| |||||| |||||| ||||||||||| |||||||||||| Sbjct: 144 atccggagcctcgaggccgagaaggccaagatggaggtgttccgccgcgagctcccc 200
>gb|AC006284.4| Arabidopsis thaliana chromosome 2 clone T4M8 map CIC11A04, complete sequence Length = 89137 Score = 48.1 bits (24), Expect = 0.084 Identities = 30/32 (93%) Strand = Plus / Minus Query: 902 tgaccaatgatgaagtgaagagccatctccag 933 |||||||||||||||| || |||||||||||| Sbjct: 18064 tgaccaatgatgaagtcaaaagccatctccag 18033
>dbj|AK229762.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL21-61-G12 Length = 639 Score = 46.1 bits (23), Expect = 0.33 Identities = 26/27 (96%) Strand = Plus / Minus Query: 855 agttgctactccaaagcaaatcaggga 881 ||||||||| ||||||||||||||||| Sbjct: 591 agttgctacaccaaagcaaatcaggga 565
>gb|AC008075.2|F24J5 Arabidopsis thaliana chromosome 1 BAC F24J5 sequence, complete sequence Length = 98942 Score = 46.1 bits (23), Expect = 0.33 Identities = 26/27 (96%) Strand = Plus / Minus Query: 855 agttgctactccaaagcaaatcaggga 881 ||||||||| ||||||||||||||||| Sbjct: 45802 agttgctacaccaaagcaaatcaggga 45776
>emb|CR855061.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0114M03, complete sequence Length = 111118 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1110 cggcgaggaagaagatggcaga 1131 |||||||||||||||||||||| Sbjct: 66274 cggcgaggaagaagatggcaga 66295
>ref|NM_001053893.1| Oryza sativa (japonica cultivar-group) Os02g0602500 (Os02g0602500) mRNA, partial cds Length = 1134 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 212 ggaggctggaggaggagaagag 233 |||||||||||||||||||||| Sbjct: 529 ggaggctggaggaggagaagag 550
>ref|NM_105539.2| Arabidopsis thaliana DNA binding / transcription factor (AT1G68670) mRNA, complete cds Length = 1528 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 856 gttgctactccaaagcaaatcaggga 881 |||||||| ||||||||||||||||| Sbjct: 980 gttgctacaccaaagcaaatcaggga 1005
>gb|AC133609.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0002C14, complete sequence Length = 154029 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 755 cagcacaacagcagcagcaagc 776 |||||||||||||||||||||| Sbjct: 145099 cagcacaacagcagcagcaagc 145120
>gb|AC129189.3| Mus musculus BAC clone RP24-67O22 from chromosome 15, complete sequence Length = 152947 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1212 tcttgagagattcctgagacag 1233 |||||||||||||||||||||| Sbjct: 127761 tcttgagagattcctgagacag 127740
>gb|AC134924.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0076M06, complete sequence Length = 133581 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 755 cagcacaacagcagcagcaagc 776 |||||||||||||||||||||| Sbjct: 42859 cagcacaacagcagcagcaagc 42880
>gb|AY091241.1| Arabidopsis thaliana unknown protein (At1g68670) mRNA, complete cds Length = 1096 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 856 gttgctactccaaagcaaatcaggga 881 |||||||| ||||||||||||||||| Sbjct: 718 gttgctacaccaaagcaaatcaggga 743
>gb|AY063886.1| Arabidopsis thaliana unknown protein (At1g68670) mRNA, complete cds Length = 1462 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 856 gttgctactccaaagcaaatcaggga 881 |||||||| ||||||||||||||||| Sbjct: 980 gttgctacaccaaagcaaatcaggga 1005
>gb|AC101771.11| Mus musculus chromosome 15, clone RP24-104H19, complete sequence Length = 153992 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1212 tcttgagagattcctgagacag 1233 |||||||||||||||||||||| Sbjct: 87412 tcttgagagattcctgagacag 87391
>emb|BX664703.21| Zebrafish DNA sequence from clone DKEYP-74A8 in linkage group 6, complete sequence Length = 193958 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1153 tgatcaacaagttatattagtttttgttca 1182 ||||||||||| ||||||||||||||||| Sbjct: 46586 tgatcaacaagccatattagtttttgttca 46557
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 755 cagcacaacagcagcagcaagc 776 |||||||||||||||||||||| Sbjct: 26241210 cagcacaacagcagcagcaagc 26241231
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1110 cggcgaggaagaagatggcaga 1131 |||||||||||||||||||||| Sbjct: 7429708 cggcgaggaagaagatggcaga 7429729 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 755 cagcacaacagcagcagcaagc 776 |||||||||||||||||||||| Sbjct: 28633675 cagcacaacagcagcagcaagc 28633696
>gb|AY087993.1| Arabidopsis thaliana clone 40196 mRNA, complete sequence Length = 1495 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 856 gttgctactccaaagcaaatcaggga 881 |||||||| ||||||||||||||||| Sbjct: 947 gttgctacaccaaagcaaatcaggga 972
>emb|AL662982.3|OSJN00184 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083I11, complete sequence Length = 149085 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1110 cggcgaggaagaagatggcaga 1131 |||||||||||||||||||||| Sbjct: 76061 cggcgaggaagaagatggcaga 76082
>emb|AL663003.2|OSJN00203 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032E06, complete sequence Length = 125196 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 755 cagcacaacagcagcagcaagc 776 |||||||||||||||||||||| Sbjct: 124465 cagcacaacagcagcagcaagc 124486
>emb|AL607001.4|OSJN00128 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088I22, complete sequence Length = 164572 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 755 cagcacaacagcagcagcaagc 776 |||||||||||||||||||||| Sbjct: 157283 cagcacaacagcagcagcaagc 157262
>dbj|AP004261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0013G11 Length = 151405 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 755 cagcacaacagcagcagcaagc 776 |||||||||||||||||||||| Sbjct: 35536 cagcacaacagcagcagcaagc 35557
>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1791_B03 Length = 166214 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 ggaggctggaggaggagaagag 233 |||||||||||||||||||||| Sbjct: 165042 ggaggctggaggaggagaagag 165021
>dbj|AP004124.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1669_F01 Length = 140019 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 ggaggctggaggaggagaagag 233 |||||||||||||||||||||| Sbjct: 40459 ggaggctggaggaggagaagag 40438
>dbj|AK073602.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052I23, full insert sequence Length = 1136 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 212 ggaggctggaggaggagaagag 233 |||||||||||||||||||||| Sbjct: 530 ggaggctggaggaggagaagag 551
>emb|BX816644.1|CNS0ABMH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH5ZH08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1402 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 856 gttgctactccaaagcaaatcaggga 881 |||||||| ||||||||||||||||| Sbjct: 931 gttgctacaccaaagcaaatcaggga 956
>dbj|AK064340.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-H03, full insert sequence Length = 1467 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 212 ggaggctggaggaggagaagag 233 |||||||||||||||||||||| Sbjct: 859 ggaggctggaggaggagaagag 880
>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0431A02 Length = 165038 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 755 cagcacaacagcagcagcaagc 776 |||||||||||||||||||||| Sbjct: 108999 cagcacaacagcagcagcaagc 108978
>emb|AL391833.10| Human DNA sequence from clone RP11-307K1 on chromosome 6, complete sequence Length = 201512 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 24 tttctcttgcaacaagtcagta 45 |||||||||||||||||||||| Sbjct: 89845 tttctcttgcaacaagtcagta 89824
>ref|XM_001183631.1| PREDICTED: Strongylocentrotus purpuratus similar to TIA1 cytotoxic granule-associated RNA binding protein-like 1 (LOC577629), mRNA Length = 4545 Score = 42.1 bits (21), Expect = 5.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 747 gcaacagacagcacaacagcagcagcaag 775 |||||||||| ||||||||||||| |||| Sbjct: 1542 gcaacagacaccacaacagcagcaacaag 1570
>ref|XM_777843.2| PREDICTED: Strongylocentrotus purpuratus similar to TIA1 cytotoxic granule-associated RNA binding protein-like 1 (LOC577629), mRNA Length = 4545 Score = 42.1 bits (21), Expect = 5.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 747 gcaacagacagcacaacagcagcagcaag 775 |||||||||| ||||||||||||| |||| Sbjct: 1542 gcaacagacaccacaacagcagcaacaag 1570
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 753 gacagcacaacagcagcagca 773 ||||||||||||||||||||| Sbjct: 6823450 gacagcacaacagcagcagca 6823430
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 753 gacagcacaacagcagcagca 773 ||||||||||||||||||||| Sbjct: 4506805 gacagcacaacagcagcagca 4506785
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 627 tgctgctaccggcggcgctgaagaa 651 ||||||| ||||||||||||||||| Sbjct: 2438242 tgctgctgccggcggcgctgaagaa 2438266
>gb|AC161235.6| Mus musculus chromosome 3, clone RP24-86C19, complete sequence Length = 206729 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1239 tagtgtagtcttttttgttgt 1259 ||||||||||||||||||||| Sbjct: 127574 tagtgtagtcttttttgttgt 127594
>gb|AC093549.1| Drosophila melanogaster 3L BAC RP98-14L10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 180633 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 753 gacagcacaacagcagcagca 773 ||||||||||||||||||||| Sbjct: 31531 gacagcacaacagcagcagca 31511
>tpg|BK001974.1| TPA_inf: Drosophila melanogaster HDC08815 (HDC08815) gene, partial cds Length = 1028 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 753 gacagcacaacagcagcagca 773 ||||||||||||||||||||| Sbjct: 820 gacagcacaacagcagcagca 800
>gb|AY070496.1| Drosophila melanogaster GH07331 full length cDNA Length = 923 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 753 gacagcacaacagcagcagca 773 ||||||||||||||||||||| Sbjct: 26 gacagcacaacagcagcagca 6
>emb|AL359512.15| Human DNA sequence from clone RP11-163B6 on chromosome 9 Contains the PDCL gene for phosducin-like, a keratin 18 (KRT18) pseudogene, the 3' end of the gene for membrane-associated nucleic acid binding protein (MNAB) (FLJ23389 FLJ20301 FLJ20713) the gene for a novel olfactory (seven transmembrane helix) receptor and two CpG islands, complete sequence Length = 58884 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 826 actgccctgcaccaactcggtgggc 850 |||||||||||||| |||||||||| Sbjct: 42358 actgccctgcaccacctcggtgggc 42334
>emb|BX055061.1|CNS09END Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC33CA11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 913 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 757 gcacaacagcagcagcaagcg 777 ||||||||||||||||||||| Sbjct: 192 gcacaacagcagcagcaagcg 212
>emb|AL670543.1|NCB7K22 Neurospora crassa DNA linkage group II BAC clone B7K22 Length = 88306 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 771 gcaagcgaggaaggcgcggcg 791 ||||||||||||||||||||| Sbjct: 40736 gcaagcgaggaaggcgcggcg 40716
>gb|AC025168.7|AC025168 Homo sapiens chromosome 15 clone RP11-43D14 map 15q14, complete sequence Length = 173336 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 863 ctccaaagcaaatcagggagt 883 ||||||||||||||||||||| Sbjct: 18323 ctccaaagcaaatcagggagt 18343
>gb|AC012377.5|AC012377 Homo sapiens chromosome 15 clone RP11-325N19 map 15q14, complete sequence Length = 197782 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 863 ctccaaagcaaatcagggagt 883 ||||||||||||||||||||| Sbjct: 124488 ctccaaagcaaatcagggagt 124508
>gb|AC007085.7|AC007085 Drosophila melanogaster, chromosome 2R, region 44D2-44E1, BAC clone BACR21H10, complete sequence Length = 166867 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 753 gacagcacaacagcagcagca 773 ||||||||||||||||||||| Sbjct: 61548 gacagcacaacagcagcagca 61528
>gb|AC068196.4| Homo sapiens BAC clone RP11-685J19 from 2, complete sequence Length = 162566 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 754 acagcacaacagcagcagcaa 774 ||||||||||||||||||||| Sbjct: 46003 acagcacaacagcagcagcaa 46023
>gb|AF241171.1|AF241171 Pseudomonas aeruginosa pathogenicity island PAGI-1 gene, complete sequence Length = 51300 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 627 tgctgctaccggcggcgctgaagaa 651 ||||||| ||||||||||||||||| Sbjct: 815 tgctgctgccggcggcgctgaagaa 839
>gb|AC104076.5| Homo sapiens BAC clone RP11-397C2 from 2, complete sequence Length = 174622 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 754 acagcacaacagcagcagcaa 774 ||||||||||||||||||||| Sbjct: 151948 acagcacaacagcagcagcaa 151968
>ref|XM_957949.1| Neurospora crassa OR74A hypothetical protein (NCU05744.1) partial mRNA Length = 246 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 771 gcaagcgaggaaggcgcggcg 791 ||||||||||||||||||||| Sbjct: 140 gcaagcgaggaaggcgcggcg 120
>ref|XM_954323.1| Neurospora crassa OR74A hypothetical protein (NCU04968.1) partial mRNA Length = 195 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 771 gcaagcgaggaaggcgcggcg 791 ||||||||||||||||||||| Sbjct: 118 gcaagcgaggaaggcgcggcg 98
>gb|AC104908.10| Mus musculus chromosome 3, clone RP23-325M18, complete sequence Length = 231792 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1239 tagtgtagtcttttttgttgt 1259 ||||||||||||||||||||| Sbjct: 212699 tagtgtagtcttttttgttgt 212679
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 780 gaaggcgcggcggtgctggtc 800 ||||||||||||||||||||| Sbjct: 994582 gaaggcgcggcggtgctggtc 994562
>gb|AC004715.1|AC004715 Drosophila melanogaster DNA sequence (P1 DS00374 (D264)), complete sequence Length = 72732 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 753 gacagcacaacagcagcagca 773 ||||||||||||||||||||| Sbjct: 27335 gacagcacaacagcagcagca 27315
>gb|L40609.1|PFAVAR23A Plasmodium falciparum (strain FCR3) variant-specific surface protein (var-2, var-3) genes, complete cds's Length = 22243 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1150 aaatgatcaacaagttatattagtt 1174 ||||||||||||| ||||||||||| Sbjct: 17463 aaatgatcaacaaattatattagtt 17487
>dbj|AB017043.1| Rattus norvegicus gene for hepatocyte nuclear factor 3 gamma, partial cds Length = 3914 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 gagcctggggcgggccaggga 179 ||||||||||||||||||||| Sbjct: 2734 gagcctggggcgggccaggga 2754
>gb|AC154098.6| Mus musculus chromosome 3, clone RP23-196L9, complete sequence Length = 201332 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1239 tagtgtagtcttttttgttgt 1259 ||||||||||||||||||||| Sbjct: 18940 tagtgtagtcttttttgttgt 18920 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 210,798,139 Number of extensions: 11608012 Number of successful extensions: 275300 Number of sequences better than 10.0: 98 Number of HSP's gapped: 275299 Number of HSP's successfully gapped: 162 Length of query: 1371 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1348 Effective length of database: 18,503,978,556 Effective search space: 24943363093488 Effective search space used: 24943363093488 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
