ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf100j08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK119848: 34 0.092
2AK110192: 32 0.35
3Os11g0587300:Os11g0587300 31 0.59
4Os11g0128000:Os11g0128000 31 0.59
5AK071024:Os12g0124400 30 1.0
6Os06g0571000:Os06g0571000 30 1.3
7AK103359:Os06g0112000 29 2.3
8Os09g0480800:Os09g0480800 28 3.8
9Os11g0515000:Os11g0515000 28 6.6
10Os08g0467600:Os08g0467600 27 8.6
11Os04g0450300:Os04g0450300 27 8.6
12Os01g0816600:Os01g0816600 27 8.6

>AK119848: |
          Length = 555
 Score = 33.9 bits (76), Expect = 0.092
 Identities = 25/81 (30%), Positives = 34/81 (41%)
 Frame = -2

Query: 269 GGTKLSTLQRRKVAQRRLGSGAWSPLRHRSRLGTLGLRIRTHRAQRNLEATAXXXXXXRE 90
           G +  ++  R    +RR  S + SP R  SR      R R+ R  R+   +         
Sbjct: 108 GRSPSASPSRSPAKRRRAASASRSPSRSPSRPRRGKSRSRSRRRDRSRSRSRRRDRSRSR 167

Query: 89  GQHSRVRCRLPARRHLWGAPR 27
           G+HSR R R   RRH    PR
Sbjct: 168 GRHSRSRSRGRGRRHNSPPPR 188



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>AK110192: |
          Length = 849

 Score = 32.0 bits (71), Expect = 0.35
 Identities = 20/53 (37%), Positives = 26/53 (49%)
 Frame = -3

Query: 184 GVALERLAFAFAPTEPSATWRPPLDGAADDGRDNTAGFAAGFRPAVIFGARPE 26
           GV+    A A APT  S+T  P   G A D R + A  ++  RPA    AR +
Sbjct: 211 GVSPSTSATAAAPTAASSTAAPASSGPASDARSSAAPASSAARPAGSQDARSD 263



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>Os11g0587300:Os11g0587300 |
          Length = 738

 Score = 31.2 bits (69), Expect = 0.59
 Identities = 28/94 (29%), Positives = 41/94 (43%)
 Frame = -3

Query: 301 PGIAEISRFLSAGQS*ALSREERSPSAASDLALGARCDTGVALERLAFAFAPTEPSATWR 122
           P  A IS FLS+ +S A+ +  R     +D  L  RC  G  L  +    A  +   +  
Sbjct: 454 PMAATISEFLSSNESFAMQQRARPDELRTDRGLLERC--GKLLSSIQAFTAGDDQQPSPV 511

Query: 121 PPLDGAADDGRDNTAGFAAGFRPAVIFGARPEPP 20
             LD AA    D  +  ++G + A+ FGA    P
Sbjct: 512 SVLDAAAFLA-DEDSPSSSGSKRAIFFGAAAPAP 544



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>Os11g0128000:Os11g0128000 |
          Length = 538

 Score = 31.2 bits (69), Expect = 0.59
 Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
 Frame = -3

Query: 235 RSPSAASDLALGARCDTGVALERLAFAFAPTE---PSATWRPPLDGAAD 98
           R    AS  A  ARCD   A  R+     P E       W PP DGAAD
Sbjct: 74  RPDDPASSSAAAARCDPSHAAVRVFMYDLPPEFHFGLLGWSPPTDGAAD 122



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>AK071024:Os12g0124400 |
          Length = 475

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
 Frame = -3

Query: 235 RSPSAASDLALGARCDTGVALERLAFAFAPTE---PSATWRPPLDGAAD 98
           R    AS  A  ARCD   A  R+     P E       W PP DGAAD
Sbjct: 74  RPDDPASSSAAAARCDPTHAAVRVFMYDLPPEFHFGILGWSPPTDGAAD 122



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>Os06g0571000:Os06g0571000 |
          Length = 436

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 18/60 (30%), Positives = 22/60 (36%)
 Frame = -3

Query: 202 GARCDTGVALERLAFAFAPTEPSATWRPPLDGAADDGRDNTAGFAAGFRPAVIFGARPEP 23
           G+  D  +A   LA    P  P   WRPP   A        A     +  A+   ARP P
Sbjct: 100 GSDDDAAMAQAMLAVISTPAPPPPLWRPPRRRARSSSSPRRATAFKAYNAALSPRARPRP 159



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>AK103359:Os06g0112000 |
          Length = 734

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -3

Query: 205 LGARCDTG-VALERLAFAFAPTEPSATWRPPLDGAADDGRDNTA 77
           L A C  G +   R+ F + PT+ S +W   +DG A +G    A
Sbjct: 203 LDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREA 246



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>Os09g0480800:Os09g0480800 |
          Length = 180

 Score = 28.5 bits (62), Expect = 3.8
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -3

Query: 244 REERSPSAASDLALGARCDTGVALERLAFAFAPTEPSATWRPP 116
           RE   P+AA+D  +    D GVA      + AP+  +A+ RPP
Sbjct: 76  REGGQPAAAADAGVAMAADAGVAAAPAPISSAPSS-AASSRPP 117



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>Os11g0515000:Os11g0515000 |
          Length = 475

 Score = 27.7 bits (60), Expect = 6.6
 Identities = 15/57 (26%), Positives = 27/57 (47%)
 Frame = +3

Query: 126 QVALGSVGANAKAKRSKATPVSQRAPSARSEAALGDLSSLESAQLCPADKNLEISAI 296
           ++ LGS  + A A  +    V    PSA + A     + L+S ++ PA +   +S +
Sbjct: 139 RLRLGSAASRAAALDALVDSVGSLPPSAAAVAVSAVAAMLDSGEILPASREKAVSVL 195



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>Os08g0467600:Os08g0467600 |
          Length = 670

 Score = 27.3 bits (59), Expect = 8.6
 Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
 Frame = +2

Query: 185 GVAAGSKRQIRGGAGRPFFSGECSTL-----SRRQEPGDLSNSWDMVNLKGKGLKLT*TF 349
           G  AGS     GG GR + + E         SR     D+ + WD  + + + LK     
Sbjct: 369 GAGAGSGGGGGGGGGRVYENAEVVQSDEEQGSRDDSDEDMESGWDDRDHRNRRLKAIVVA 428

Query: 350 NPTSLAVTGPYG-HGEYDG 403
           N    AVTG    HG   G
Sbjct: 429 NGNGNAVTGGRSVHGNGSG 447



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>Os04g0450300:Os04g0450300 |
          Length = 387

 Score = 27.3 bits (59), Expect = 8.6
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +3

Query: 129 VALGSVGANAKAKRSKATPVSQRAPSARSEAALG 230
           V + +VGA A++  +   P + +AP+ R +   G
Sbjct: 13  VVMAAVGAGAQSSSASPAPATSQAPTVRQQTPFG 46



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>Os01g0816600:Os01g0816600 |
          Length = 961

 Score = 27.3 bits (59), Expect = 8.6
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 321 PLRFTISQELLRSPGSCRRDKVEHSP 244
           PL FT+ Q L  +PGS     VE SP
Sbjct: 464 PLEFTLVQNLSLAPGSVAISNVEFSP 489


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 17,425,859
Number of extensions: 402288
Number of successful extensions: 1366
Number of sequences better than 10.0: 12
Number of HSP's gapped: 1365
Number of HSP's successfully gapped: 12
Length of query: 210
Length of database: 15,399,855
Length adjustment: 96
Effective length of query: 114
Effective length of database: 11,555,919
Effective search space: 1317374766
Effective search space used: 1317374766
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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