ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf103f22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001059375.1| Oryza sativa (japonica cultivar-group) Os04g0434300 (Os04g0434300) mRNA, partial cds Length = 1961 Score = 1475 bits (744), Expect = 0.0 Identities = 1271/1446 (87%), Gaps = 3/1446 (0%) Strand = Plus / Plus Query: 1 gacgtgctgggaccggccgggttttccggcggcggagcgcctcccgggctccgcctacct 60 ||||||||||| ||||||||| | |||||||||| ||| |||| |||||||| || || Sbjct: 7 gacgtgctggggccggccgggatcgccggcggcggggcggctccggggctccgtctcccg 66 Query: 61 ctctccactgtcgccgtcaagcccaagcgc---aggccgtccaggctcgtgcagacgcag 117 ||| || | |||||||| ||||||||||| || |||||||| ||| |||||| | | Sbjct: 67 ctcgccgccgtcgccgtgaagcccaagcgtccgagatcgtccagggtcgcgcagacccgg 126 Query: 118 ccccagccagatgcccggatcccaggcacgcagacgatatacgtcaagacattcgggtgc 177 || ||||| || ||||||||||| || |||||||||||||| || ||||| ||||||||| Sbjct: 127 ccgcagcccgaggcccggatccccgggacgcagacgatatatgtgaagacgttcgggtgc 186 Query: 178 tcacataaccagagtgacagtgagtacatgtcggggcagctctcggcgtttggatatgca 237 || ||||||||||||||||||||||||||||| |||||||| || |||||||||||||| Sbjct: 187 tcgcataaccagagtgacagtgagtacatgtcagggcagctgtcagcgtttggatatgcg 246 Query: 238 attactgaagagcctgaaggagctgatttgtggctaattaacacatgcactgtgaaaaat 297 || ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 247 atcactgaagagcccgaaggagcggatttgtggctaattaacacatgcactgtgaaaaac 306 Query: 298 ccaagtcaatctgccatgtcaactctcatatcaaaatgcaagacggcaaacaagccactg 357 |||||||| ||||||||| ||||||||||||| || ||||||| ||||||||||| || Sbjct: 307 ccaagtcagtctgccatgacaactctcatatcgaagtgcaagagtgcaaacaagcctttg 366 Query: 358 gttgtagctggctgtgtgccacaaggaagccgggatctgaaggagcttgaaggtattagt 417 ||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 367 gttgtggctggatgtgtaccacaaggaagccgggatctgaaagagcttgaaggtattagc 426 Query: 418 ataataggagtgcagcagatagatcgggttgttgaagtagttgaggaaactttaaaaggg 477 | || |||||||| ||||| || || ||||||||||| ||||| ||||| |||||||| Sbjct: 427 gttattggagtgcaacagattgaccgcgttgttgaagttgttgaagaaaccttaaaaggc 486 Query: 478 catgaggttcggttgttgagtcggaaaacactgccctcacttgatttacccaaggttcga 537 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 487 catgaggttcggttgttgagtcggaaaacactgccctcacttgatttacctaaggtaagg 546 Query: 538 aagaatagatttattgagattcttcccataaatgtcgggtgtctaggcgcttgcacttac 597 ||||| | |||||| ||||||||||| || ||||| |||||| | || |||||||| ||| Sbjct: 547 aagaacaaatttatcgagattcttcctattaatgttgggtgtttgggtgcttgcacatac 606 Query: 598 tgcaagacaaagcatgctcgtggtcatctgggaagctattctatagacagcttggtagat 657 ||||||||||||||||||||||||||||| ||||||||| ||||||| || ||||||||| Sbjct: 607 tgcaagacaaagcatgctcgtggtcatcttggaagctatactatagaaagtttggtagat 666 Query: 658 cgcgtgaaaattgttgtctcagaaggtgttcgtgagatatggttgagcagtgaagatact 717 || ||||||||||||||||| |||||||| || || ||||||||||| ||||| |||||| Sbjct: 667 cgtgtgaaaattgttgtctctgaaggtgtccgagaaatatggttgagtagtgaggatact 726 Query: 718 ggtgcttatggtagggatatcggtacaaatcttccaaatctcttaaatgcaattgttgct 777 ||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| |||| Sbjct: 727 ggtgcttatggcagggatatcggtacaaatcttccaaatctattaaatggaattgctgct 786 Query: 778 gagcttcctgcggacagaagcacaatgcttcgcatcgggatgacaaatcctcctttcata 837 ||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||||||| Sbjct: 787 gagcttcctgcggacagaagcacgatgcttcgcattggcatgaccaatcctcctttcata 846 Query: 838 ctggagcatttgaatgagatagctagtattttgcgccatccttgtgtttatactttcctt 897 ||||||||||||| ||||| |||||| ||||| ||||||| ||||||||| ||||||| Sbjct: 847 ttggagcatttgaaggagattgctagtgttttgtgccatccctgtgtttattctttcctc 906 Query: 898 catgttcccgtgcaatcgggaagtgatgctgttttacaggcaatgaatcgtgaatacact 957 || ||||| || ||||| ||||||||||| |||||| |||||||||||||||||||||| Sbjct: 907 cacgttcctgtacaatcaggaagtgatgcagttttaacggcaatgaatcgtgaatacact 966 Query: 958 gtcagtgaattcagaatggtagttgatactctctgtgagcttgtcccgggcatgcaaatt 1017 || ||||||||||| | ||||||||| ||||| |||||||||||||| || ||||||||| Sbjct: 967 gtgagtgaattcaggagggtagttgacactctttgtgagcttgtccctggaatgcaaatt 1026 Query: 1018 gccacggatattatttgtggctttcctggtgaaaccgatgaagattttgttgaaacggtt 1077 || || |||||||||||||| || || ||||| || ||||| ||||| | |||| ||| Sbjct: 1027 gctacagatattatttgtggattccccggtgagactgatgaggatttctctcaaactgtt 1086 Query: 1078 aaccttataaaagaatatcagttacctcaagttcacatatcacagttttatcccagacca 1137 |||||| ||||| |||||| || ||||| |||||||||||||| || || ||||||||| Sbjct: 1087 aaccttgtaaaacaatatctattccctcaggttcacatatcacaattctaccccagacca 1146 Query: 1138 ggaacacctgctgctaggatgaagaaagtgcctagcattgaagtgaaaaaacgaagtcgt 1197 ||||||||||||||||||||||| || || || ||| |||||||||| ||| | || ||| Sbjct: 1147 ggaacacctgctgctaggatgaaaaaggttccaagcgttgaagtgaagaaaaggagccgt 1206 Query: 1198 gaattgacgtcagtttttgaagctttttcaccatacgaaggactgaaaggcaaagtggag 1257 |||||||| |||||||| || | |||||||| ||| ||||| || |||||||||| ||| Sbjct: 1207 gaattgacctcagttttcgagtcattttcaccctaccaaggaatggaaggcaaagtagag 1266 Query: 1258 aggatatggatcactgaaatagctactgatggtgttcatctggttggacataccaaaggg 1317 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1267 aggatatggatcactgaaatagctactgatggtgttcatttggttggacataccaaagga 1326 Query: 1318 tatatccaggttcttgtcattgctccagatagtatgctaggaacatcagcagatgcgaag 1377 ||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||| |||| Sbjct: 1327 tatatccaggtgcttgtcattgctcctgatagcatgttaggaacatcagcagatgtgaag 1386 Query: 1378 atcacatctgtcggaagatggtctgtatttggtgaagtgatagaaggaaccattgcagta 1437 ||||||||||| || ||||||||||| ||||||||||||||||||||| || ||| || | Sbjct: 1387 atcacatctgttgggagatggtctgtgtttggtgaagtgatagaaggatccgttgtagca 1446 Query: 1438 aaggaa 1443 |||||| Sbjct: 1447 aaggaa 1452 Score = 46.1 bits (23), Expect = 0.49 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1786 tggggtggtttggccgtaagttttgccacaacagt 1820 ||||||||||||||||| || |||||||| ||||| Sbjct: 1780 tggggtggtttggccgtgagctttgccacgacagt 1814
>dbj|AK101879.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070J24, full insert sequence Length = 1961 Score = 1459 bits (736), Expect = 0.0 Identities = 1270/1446 (87%), Gaps = 4/1446 (0%) Strand = Plus / Plus Query: 1 gacgtgctgggaccggccgggttttccggcggcggagcgcctcccgggctccgcctacct 60 ||||||||||| ||||||||| | |||||||||| ||| |||| |||||||| || || Sbjct: 8 gacgtgctggggccggccgggatcgccggcggcggggcggctccggggctccgtctcccg 67 Query: 61 ctctccactgtcgccgtcaagcccaagcgc---aggccgtccaggctcgtgcagacgcag 117 ||| || | |||||||| ||||||||||| || || ||||| ||| |||||| | | Sbjct: 68 ctcgccgccgtcgccgtgaagcccaagcgtccgagatcg-ccagggtcgcgcagacccgg 126 Query: 118 ccccagccagatgcccggatcccaggcacgcagacgatatacgtcaagacattcgggtgc 177 || ||||| || ||||||||||| || |||||||||||||| || ||||| ||||||||| Sbjct: 127 ccgcagcccgaggcccggatccccgggacgcagacgatatatgtgaagacgttcgggtgc 186 Query: 178 tcacataaccagagtgacagtgagtacatgtcggggcagctctcggcgtttggatatgca 237 || ||||||||||||||||||||||||||||| |||||||| || |||||||||||||| Sbjct: 187 tcgcataaccagagtgacagtgagtacatgtcagggcagctgtcagcgtttggatatgcg 246 Query: 238 attactgaagagcctgaaggagctgatttgtggctaattaacacatgcactgtgaaaaat 297 || ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 247 atcactgaagagcccgaaggagcggatttgtggctaattaacacatgcactgtgaaaaac 306 Query: 298 ccaagtcaatctgccatgtcaactctcatatcaaaatgcaagacggcaaacaagccactg 357 |||||||| ||||||||| ||||||||||||| || ||||||| ||||||||||| || Sbjct: 307 ccaagtcagtctgccatgacaactctcatatcgaagtgcaagagtgcaaacaagcctttg 366 Query: 358 gttgtagctggctgtgtgccacaaggaagccgggatctgaaggagcttgaaggtattagt 417 ||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 367 gttgtggctggatgtgtaccacaaggaagccgggatctgaaagagcttgaaggtattagc 426 Query: 418 ataataggagtgcagcagatagatcgggttgttgaagtagttgaggaaactttaaaaggg 477 | || |||||||| ||||| || || ||||||||||| ||||| ||||| |||||||| Sbjct: 427 gttattggagtgcaacagattgaccgcgttgttgaagttgttgaagaaaccttaaaaggc 486 Query: 478 catgaggttcggttgttgagtcggaaaacactgccctcacttgatttacccaaggttcga 537 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 487 catgaggttcggttgttgagtcggaaaacactgccctcacttgatttacctaaggtaagg 546 Query: 538 aagaatagatttattgagattcttcccataaatgtcgggtgtctaggcgcttgcacttac 597 ||||| | |||||| ||||||||||| || ||||| |||||| | || |||||||| ||| Sbjct: 547 aagaacaaatttatcgagattcttcctattaatgttgggtgtttgggtgcttgcacatac 606 Query: 598 tgcaagacaaagcatgctcgtggtcatctgggaagctattctatagacagcttggtagat 657 ||||||||||||||||||||||||||||| ||||||||| ||||||| || ||||||||| Sbjct: 607 tgcaagacaaagcatgctcgtggtcatcttggaagctatactatagaaagtttggtagat 666 Query: 658 cgcgtgaaaattgttgtctcagaaggtgttcgtgagatatggttgagcagtgaagatact 717 || ||||||||||||||||| |||||||| || || ||||||||||| ||||| |||||| Sbjct: 667 cgtgtgaaaattgttgtctctgaaggtgtccgagaaatatggttgagtagtgaggatact 726 Query: 718 ggtgcttatggtagggatatcggtacaaatcttccaaatctcttaaatgcaattgttgct 777 ||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| |||| Sbjct: 727 ggtgcttatggcagggatatcggtacaaatcttccaaatctattaaatggaattgctgct 786 Query: 778 gagcttcctgcggacagaagcacaatgcttcgcatcgggatgacaaatcctcctttcata 837 ||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||||||| Sbjct: 787 gagcttcctgcggacagaagcacgatgcttcgcattggcatgaccaatcctcctttcata 846 Query: 838 ctggagcatttgaatgagatagctagtattttgcgccatccttgtgtttatactttcctt 897 ||||||||||||| ||||| |||||| ||||| ||||||| ||||||||| ||||||| Sbjct: 847 ttggagcatttgaaggagattgctagtgttttgtgccatccctgtgtttattctttcctc 906 Query: 898 catgttcccgtgcaatcgggaagtgatgctgttttacaggcaatgaatcgtgaatacact 957 || ||||| || ||||| ||||||||||| |||||| |||||||||||||||||||||| Sbjct: 907 cacgttcctgtacaatcaggaagtgatgcagttttaacggcaatgaatcgtgaatacact 966 Query: 958 gtcagtgaattcagaatggtagttgatactctctgtgagcttgtcccgggcatgcaaatt 1017 || ||||||||||| | ||||||||| ||||| |||||||||||||| || ||||||||| Sbjct: 967 gtgagtgaattcaggagggtagttgacactctttgtgagcttgtccctggaatgcaaatt 1026 Query: 1018 gccacggatattatttgtggctttcctggtgaaaccgatgaagattttgttgaaacggtt 1077 || || |||||||||||||| || || ||||| || ||||| ||||| | |||| ||| Sbjct: 1027 gctacagatattatttgtggattccccggtgagactgatgaggatttctctcaaactgtt 1086 Query: 1078 aaccttataaaagaatatcagttacctcaagttcacatatcacagttttatcccagacca 1137 |||||| ||||| |||||| || ||||| |||||||||||||| || || ||||||||| Sbjct: 1087 aaccttgtaaaacaatatctattccctcaggttcacatatcacaattctaccccagacca 1146 Query: 1138 ggaacacctgctgctaggatgaagaaagtgcctagcattgaagtgaaaaaacgaagtcgt 1197 ||||||||||||||||||||||| || || || ||| |||||||||| ||| | || ||| Sbjct: 1147 ggaacacctgctgctaggatgaaaaaggttccaagcgttgaagtgaagaaaaggagccgt 1206 Query: 1198 gaattgacgtcagtttttgaagctttttcaccatacgaaggactgaaaggcaaagtggag 1257 |||||||| |||||||| || | |||||||| ||| ||||| || |||||||||| ||| Sbjct: 1207 gaattgacctcagttttcgagtcattttcaccctaccaaggaatggaaggcaaagtagag 1266 Query: 1258 aggatatggatcactgaaatagctactgatggtgttcatctggttggacataccaaaggg 1317 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1267 aggatatggatcactgaaatagctactgatggtgttcatttggttggacataccaaagga 1326 Query: 1318 tatatccaggttcttgtcattgctccagatagtatgctaggaacatcagcagatgcgaag 1377 ||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||| |||| Sbjct: 1327 tatatccaggtgcttgtcattgctcctgatagcatgttaggaacatcagcagatgtgaag 1386 Query: 1378 atcacatctgtcggaagatggtctgtatttggtgaagtgatagaaggaaccattgcagta 1437 ||||||||||| || ||||||||||| ||||||||||||||||||||| || ||| || | Sbjct: 1387 atcacatctgttgggagatggtctgtgtttggtgaagtgatagaaggatccgttgtagca 1446 Query: 1438 aaggaa 1443 |||||| Sbjct: 1447 aaggaa 1452 Score = 46.1 bits (23), Expect = 0.49 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1786 tggggtggtttggccgtaagttttgccacaacagt 1820 ||||||||||||||||| || |||||||| ||||| Sbjct: 1780 tggggtggtttggccgtgagctttgccacgacagt 1814
>gb|AY105923.1| Zea mays PCO122658 mRNA sequence Length = 985 Score = 414 bits (209), Expect = e-112 Identities = 524/629 (83%) Strand = Plus / Plus Query: 797 gcacaatgcttcgcatcgggatgacaaatcctcctttcatactggagcatttgaatgaga 856 |||||||||| ||||| || ||||||||||||||||||||||| ||||||||||| |||| Sbjct: 1 gcacaatgctccgcataggcatgacaaatcctcctttcatactagagcatttgaaggaga 60 Query: 857 tagctagtattttgcgccatccttgtgtttatactttccttcatgttcccgtgcaatcgg 916 ||||| ||||| | ||||| |||||||| ||||||| ||||| || |||||||| | Sbjct: 61 tagctgccgttttgtgtcatccctgtgtttactctttcctccatgtccctgtgcaatctg 120 Query: 917 gaagtgatgctgttttacaggcaatgaatcgtgaatacactgtcagtgaattcagaatgg 976 |||| ||| |||||||| ||||||||||||||||||| ||||| | || ||||||| || Sbjct: 121 gaagcgattctgttttaaaggcaatgaatcgtgaatatactgttggcgagttcagaaagg 180 Query: 977 tagttgatactctctgtgagcttgtcccgggcatgcaaattgccacggatattatttgtg 1036 |||| || ||||| |||||||||||||| || ||||||||||| || |||||||| |||| Sbjct: 181 tagtcgacactctgtgtgagcttgtccctggaatgcaaattgctacagatattatctgtg 240 Query: 1037 gctttcctggtgaaaccgatgaagattttgttgaaacggttaaccttataaaagaatatc 1096 ||||||||||||| ||||| |||||||| ||| || |||||||| |||| ||||||| Sbjct: 241 gctttcctggtgagaccgacgaagatttctctgagactgttaacctcgtaaaggaatatc 300 Query: 1097 agttacctcaagttcacatatcacagttttatcccagaccaggaacacctgctgctagga 1156 | || |||||||| ||||| || ||||| || ||||||||||| || ||||||||||||| Sbjct: 301 aattccctcaagtccacatttcgcagttctaccccagaccagggacgcctgctgctagga 360 Query: 1157 tgaagaaagtgcctagcattgaagtgaaaaaacgaagtcgtgaattgacgtcagtttttg 1216 |||||||||| || |||| |||||||| || || || ||||||||||| ||||| || | Sbjct: 361 tgaagaaagtaccaagcaacgaagtgaagaagcggagccgtgaattgacttcagtcttcg 420 Query: 1217 aagctttttcaccatacgaaggactgaaaggcaaagtggagaggatatggatcactgaaa 1276 || | ||||| |||||| ||||| || |||||||||| |||| ||| |||||||| || | Sbjct: 421 aatcgttttcgccataccaaggaatggaaggcaaagtagagaagatctggatcaccgaga 480 Query: 1277 tagctactgatggtgttcatctggttggacataccaaagggtatatccaggttcttgtca 1336 | || | || |||||||| ||||| ||||||||||| || || |||||||| || || | Sbjct: 481 ttgcgtccgacggtgttcacctggtcggacataccaagggatacatccaggtgctggtaa 540 Query: 1337 ttgctccagatagtatgctaggaacatcagcagatgcgaagatcacatctgtcggaagat 1396 |||||| ||||| ||| | ||||| || || || ||||||||||| ||||||||| ||| Sbjct: 541 ctgctcctgatagcatgttgggaacgtccgcggacgcgaagatcacgtctgtcggacgat 600 Query: 1397 ggtctgtatttggtgaagtgatagaagga 1425 |||| || || |||| |||| |||||||| Sbjct: 601 ggtccgtcttcggtgtagtggtagaagga 629
>emb|CR855153.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0823A09, complete sequence Length = 85663 Score = 293 bits (148), Expect = 1e-75 Identities = 226/252 (89%) Strand = Plus / Minus Query: 282 atgcactgtgaaaaatccaagtcaatctgccatgtcaactctcatatcaaaatgcaagac 341 ||||||||||||||| |||||||| ||||||||| ||||||||||||| || ||||||| Sbjct: 67688 atgcactgtgaaaaacccaagtcagtctgccatgacaactctcatatcgaagtgcaagag 67629 Query: 342 ggcaaacaagccactggttgtagctggctgtgtgccacaaggaagccgggatctgaagga 401 ||||||||||| ||||||| ||||| ||||| ||||||||||||||||||||||| || Sbjct: 67628 tgcaaacaagcctttggttgtggctggatgtgtaccacaaggaagccgggatctgaaaga 67569 Query: 402 gcttgaaggtattagtataataggagtgcagcagatagatcgggttgttgaagtagttga 461 ||||||||||||||| | || |||||||| ||||| || || ||||||||||| ||||| Sbjct: 67568 gcttgaaggtattagcgttattggagtgcaacagattgaccgcgttgttgaagttgttga 67509 Query: 462 ggaaactttaaaagggcatgaggttcggttgttgagtcggaaaacactgccctcacttga 521 ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67508 agaaaccttaaaaggccatgaggttcggttgttgagtcggaaaacactgccctcacttga 67449 Query: 522 tttacccaaggt 533 |||||| ||||| Sbjct: 67448 tttacctaaggt 67437 Score = 254 bits (128), Expect = 1e-63 Identities = 185/204 (90%) Strand = Plus / Minus Query: 730 agggatatcggtacaaatcttccaaatctcttaaatgcaattgttgctgagcttcctgcg 789 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 66909 agggatatcggtacaaatcttccaaatctattaaatggaattgttgctgagcttcctgcg 66850 Query: 790 gacagaagcacaatgcttcgcatcgggatgacaaatcctcctttcatactggagcatttg 849 ||||||||||| ||||||||||| || ||||| ||||||||||||||| ||||||||||| Sbjct: 66849 gacagaagcacgatgcttcgcattggcatgaccaatcctcctttcatattggagcatttg 66790 Query: 850 aatgagatagctagtattttgcgccatccttgtgtttatactttccttcatgttcccgtg 909 || ||||| |||||| ||||| ||||||| ||||||||| ||||||| || ||||| || Sbjct: 66789 aaggagattgctagtgttttgtgccatccctgtgtttattctttcctccacgttcctgta 66730 Query: 910 caatcgggaagtgatgctgtttta 933 ||||| ||||||||||| |||||| Sbjct: 66729 caatcaggaagtgatgcagtttta 66706 Score = 184 bits (93), Expect = 8e-43 Identities = 132/145 (91%) Strand = Plus / Minus Query: 1299 ggttggacataccaaagggtatatccaggttcttgtcattgctccagatagtatgctagg 1358 |||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 65880 ggttggacataccaaaggatatatccaggtgcttgtcattgctcctgatagcatgttagg 65821 Query: 1359 aacatcagcagatgcgaagatcacatctgtcggaagatggtctgtatttggtgaagtgat 1418 |||||||||||||| ||||||||||||||| || ||||||||||| |||||||||||||| Sbjct: 65820 aacatcagcagatgtgaagatcacatctgttgggagatggtctgtgtttggtgaagtgat 65761 Query: 1419 agaaggaaccattgcagtaaaggaa 1443 ||||||| || ||| || ||||||| Sbjct: 65760 agaaggatccgttgtagcaaaggaa 65736 Score = 168 bits (85), Expect = 5e-38 Identities = 145/165 (87%) Strand = Plus / Minus Query: 1137 aggaacacctgctgctaggatgaagaaagtgcctagcattgaagtgaaaaaacgaagtcg 1196 |||||||||||||||||||||||| || || || ||| |||||||||| ||| | || || Sbjct: 66149 aggaacacctgctgctaggatgaaaaaggttccaagcgttgaagtgaagaaaaggagccg 66090 Query: 1197 tgaattgacgtcagtttttgaagctttttcaccatacgaaggactgaaaggcaaagtgga 1256 ||||||||| |||||||| || | |||||||| ||| ||||| || |||||||||| || Sbjct: 66089 tgaattgacctcagttttcgagtcattttcaccctaccaaggaatggaaggcaaagtaga 66030 Query: 1257 gaggatatggatcactgaaatagctactgatggtgttcatctggt 1301 |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 66029 gaggatatggatcactgaaatagctactgatggtgttcatttggt 65985 Score = 135 bits (68), Expect = 7e-28 Identities = 95/104 (91%) Strand = Plus / Minus Query: 934 caggcaatgaatcgtgaatacactgtcagtgaattcagaatggtagttgatactctctgt 993 |||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||| ||| Sbjct: 66581 caggcaatgaatcgtgaatacactgtgagtgaattcaggagggtagttgacactctttgt 66522 Query: 994 gagcttgtcccgggcatgcaaattgccacggatattatttgtgg 1037 ||||||||||| || ||||||||||| || |||||||||||||| Sbjct: 66521 gagcttgtccctggaatgcaaattgctacagatattatttgtgg 66478 Score = 133 bits (67), Expect = 3e-27 Identities = 88/95 (92%) Strand = Plus / Minus Query: 187 cagagtgacagtgagtacatgtcggggcagctctcggcgtttggatatgcaattactgaa 246 ||||||||||||||||||||||| |||||||| || |||||||||||||| || |||||| Sbjct: 68102 cagagtgacagtgagtacatgtcagggcagctgtcagcgtttggatatgcgatcactgaa 68043 Query: 247 gagcctgaaggagctgatttgtggctaattaacac 281 ||||| |||||||| |||||||||||||||||||| Sbjct: 68042 gagcccgaaggagcggatttgtggctaattaacac 68008 Score = 121 bits (61), Expect = 1e-23 Identities = 97/109 (88%) Strand = Plus / Minus Query: 546 atttattgagattcttcccataaatgtcgggtgtctaggcgcttgcacttactgcaagac 605 |||||| ||||||||||| || ||||| |||||| | || |||||||| ||||||||||| Sbjct: 67274 atttatcgagattcttcctattaatgttgggtgtttgggtgcttgcacatactgcaagac 67215 Query: 606 aaagcatgctcgtggtcatctgggaagctattctatagacagcttggta 654 ||||||||||||||||||||| ||||||||| ||||||| || |||||| Sbjct: 67214 aaagcatgctcgtggtcatcttggaagctatactatagaaagtttggta 67166 Score = 103 bits (52), Expect = 2e-18 Identities = 73/80 (91%) Strand = Plus / Minus Query: 651 ggtagatcgcgtgaaaattgttgtctcagaaggtgttcgtgagatatggttgagcagtga 710 ||||||||| ||||||||||||||||| |||||||| || || ||||||||||| ||||| Sbjct: 67084 ggtagatcgtgtgaaaattgttgtctctgaaggtgtccgagaaatatggttgagtagtga 67025 Query: 711 agatactggtgcttatggta 730 ||||||||||||||||||| Sbjct: 67024 ggatactggtgcttatggta 67005 Score = 69.9 bits (35), Expect = 3e-08 Identities = 124/153 (81%), Gaps = 3/153 (1%) Strand = Plus / Minus Query: 1 gacgtgctgggaccggccgggttttccggcggcggagcgcctcccgggctccgcctacct 60 ||||||||||| ||||||||| | |||||||||| ||| |||| |||||||| || || Sbjct: 68651 gacgtgctggggccggccgggatcgccggcggcggggcggctccggggctccgtctcccg 68592 Query: 61 ctctccactgtcgccgtcaagcccaagcg---caggccgtccaggctcgtgcagacgcag 117 ||| || | |||||||| ||||||||||| || |||||||| ||| |||||| | | Sbjct: 68591 ctcgccgccgtcgccgtgaagcccaagcgtccgagatcgtccagggtcgcgcagacccgg 68532 Query: 118 ccccagccagatgcccggatcccaggcacgcag 150 || ||||| || ||||||||||| || |||||| Sbjct: 68531 ccgcagcccgaggcccggatccccgggacgcag 68499 Score = 60.0 bits (30), Expect = 3e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 1070 aaacggttaaccttataaaagaatatcagttacctcaagttcacatatcacagttttatc 1129 |||| ||||||||| ||||| ||||||| || ||||| |||||||||||||| || || | Sbjct: 66308 aaactgttaaccttgtaaaacaatatcaattccctcaggttcacatatcacaattctacc 66249 Query: 1130 ccagaccagg 1139 | |||||||| Sbjct: 66248 ctagaccagg 66239 Score = 54.0 bits (27), Expect = 0.002 Identities = 39/43 (90%) Strand = Plus / Minus Query: 147 gcagacgatatacgtcaagacattcgggtgctcacataaccag 189 |||||||||||| || ||||| ||||||||||| ||||||||| Sbjct: 68410 gcagacgatatatgtgaagacgttcgggtgctcgcataaccag 68368 Score = 46.1 bits (23), Expect = 0.49 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1786 tggggtggtttggccgtaagttttgccacaacagt 1820 ||||||||||||||||| || |||||||| ||||| Sbjct: 65408 tggggtggtttggccgtgagctttgccacgacagt 65374
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 293 bits (148), Expect = 1e-75 Identities = 226/252 (89%) Strand = Plus / Minus Query: 282 atgcactgtgaaaaatccaagtcaatctgccatgtcaactctcatatcaaaatgcaagac 341 ||||||||||||||| |||||||| ||||||||| ||||||||||||| || ||||||| Sbjct: 21602597 atgcactgtgaaaaacccaagtcagtctgccatgacaactctcatatcgaagtgcaagag 21602538 Query: 342 ggcaaacaagccactggttgtagctggctgtgtgccacaaggaagccgggatctgaagga 401 ||||||||||| ||||||| ||||| ||||| ||||||||||||||||||||||| || Sbjct: 21602537 tgcaaacaagcctttggttgtggctggatgtgtaccacaaggaagccgggatctgaaaga 21602478 Query: 402 gcttgaaggtattagtataataggagtgcagcagatagatcgggttgttgaagtagttga 461 ||||||||||||||| | || |||||||| ||||| || || ||||||||||| ||||| Sbjct: 21602477 gcttgaaggtattagcgttattggagtgcaacagattgaccgcgttgttgaagttgttga 21602418 Query: 462 ggaaactttaaaagggcatgaggttcggttgttgagtcggaaaacactgccctcacttga 521 ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21602417 agaaaccttaaaaggccatgaggttcggttgttgagtcggaaaacactgccctcacttga 21602358 Query: 522 tttacccaaggt 533 |||||| ||||| Sbjct: 21602357 tttacctaaggt 21602346 Score = 246 bits (124), Expect = 3e-61 Identities = 184/204 (90%) Strand = Plus / Minus Query: 730 agggatatcggtacaaatcttccaaatctcttaaatgcaattgttgctgagcttcctgcg 789 ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 21601818 agggatatcggtacaaatcttccaaatctattaaatggaattgctgctgagcttcctgcg 21601759 Query: 790 gacagaagcacaatgcttcgcatcgggatgacaaatcctcctttcatactggagcatttg 849 ||||||||||| ||||||||||| || ||||| ||||||||||||||| ||||||||||| Sbjct: 21601758 gacagaagcacgatgcttcgcattggcatgaccaatcctcctttcatattggagcatttg 21601699 Query: 850 aatgagatagctagtattttgcgccatccttgtgtttatactttccttcatgttcccgtg 909 || ||||| |||||| ||||| ||||||| ||||||||| ||||||| || ||||| || Sbjct: 21601698 aaggagattgctagtgttttgtgccatccctgtgtttattctttcctccacgttcctgta 21601639 Query: 910 caatcgggaagtgatgctgtttta 933 ||||| ||||||||||| |||||| Sbjct: 21601638 caatcaggaagtgatgcagtttta 21601615 Score = 184 bits (93), Expect = 8e-43 Identities = 132/145 (91%) Strand = Plus / Minus Query: 1299 ggttggacataccaaagggtatatccaggttcttgtcattgctccagatagtatgctagg 1358 |||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 21600789 ggttggacataccaaaggatatatccaggtgcttgtcattgctcctgatagcatgttagg 21600730 Query: 1359 aacatcagcagatgcgaagatcacatctgtcggaagatggtctgtatttggtgaagtgat 1418 |||||||||||||| ||||||||||||||| || ||||||||||| |||||||||||||| Sbjct: 21600729 aacatcagcagatgtgaagatcacatctgttgggagatggtctgtgtttggtgaagtgat 21600670 Query: 1419 agaaggaaccattgcagtaaaggaa 1443 ||||||| || ||| || ||||||| Sbjct: 21600669 agaaggatccgttgtagcaaaggaa 21600645 Score = 168 bits (85), Expect = 5e-38 Identities = 145/165 (87%) Strand = Plus / Minus Query: 1137 aggaacacctgctgctaggatgaagaaagtgcctagcattgaagtgaaaaaacgaagtcg 1196 |||||||||||||||||||||||| || || || ||| |||||||||| ||| | || || Sbjct: 21601058 aggaacacctgctgctaggatgaaaaaggttccaagcgttgaagtgaagaaaaggagccg 21600999 Query: 1197 tgaattgacgtcagtttttgaagctttttcaccatacgaaggactgaaaggcaaagtgga 1256 ||||||||| |||||||| || | |||||||| ||| ||||| || |||||||||| || Sbjct: 21600998 tgaattgacctcagttttcgagtcattttcaccctaccaaggaatggaaggcaaagtaga 21600939 Query: 1257 gaggatatggatcactgaaatagctactgatggtgttcatctggt 1301 |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 21600938 gaggatatggatcactgaaatagctactgatggtgttcatttggt 21600894 Score = 135 bits (68), Expect = 7e-28 Identities = 95/104 (91%) Strand = Plus / Minus Query: 934 caggcaatgaatcgtgaatacactgtcagtgaattcagaatggtagttgatactctctgt 993 |||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||| ||| Sbjct: 21601490 caggcaatgaatcgtgaatacactgtgagtgaattcaggagggtagttgacactctttgt 21601431 Query: 994 gagcttgtcccgggcatgcaaattgccacggatattatttgtgg 1037 ||||||||||| || ||||||||||| || |||||||||||||| Sbjct: 21601430 gagcttgtccctggaatgcaaattgctacagatattatttgtgg 21601387 Score = 133 bits (67), Expect = 3e-27 Identities = 88/95 (92%) Strand = Plus / Minus Query: 187 cagagtgacagtgagtacatgtcggggcagctctcggcgtttggatatgcaattactgaa 246 ||||||||||||||||||||||| |||||||| || |||||||||||||| || |||||| Sbjct: 21603011 cagagtgacagtgagtacatgtcagggcagctgtcagcgtttggatatgcgatcactgaa 21602952 Query: 247 gagcctgaaggagctgatttgtggctaattaacac 281 ||||| |||||||| |||||||||||||||||||| Sbjct: 21602951 gagcccgaaggagcggatttgtggctaattaacac 21602917 Score = 121 bits (61), Expect = 1e-23 Identities = 97/109 (88%) Strand = Plus / Minus Query: 546 atttattgagattcttcccataaatgtcgggtgtctaggcgcttgcacttactgcaagac 605 |||||| ||||||||||| || ||||| |||||| | || |||||||| ||||||||||| Sbjct: 21602183 atttatcgagattcttcctattaatgttgggtgtttgggtgcttgcacatactgcaagac 21602124 Query: 606 aaagcatgctcgtggtcatctgggaagctattctatagacagcttggta 654 ||||||||||||||||||||| ||||||||| ||||||| || |||||| Sbjct: 21602123 aaagcatgctcgtggtcatcttggaagctatactatagaaagtttggta 21602075 Score = 103 bits (52), Expect = 2e-18 Identities = 73/80 (91%) Strand = Plus / Minus Query: 651 ggtagatcgcgtgaaaattgttgtctcagaaggtgttcgtgagatatggttgagcagtga 710 ||||||||| ||||||||||||||||| |||||||| || || ||||||||||| ||||| Sbjct: 21601993 ggtagatcgtgtgaaaattgttgtctctgaaggtgtccgagaaatatggttgagtagtga 21601934 Query: 711 agatactggtgcttatggta 730 ||||||||||||||||||| Sbjct: 21601933 ggatactggtgcttatggta 21601914 Score = 69.9 bits (35), Expect = 3e-08 Identities = 124/153 (81%), Gaps = 3/153 (1%) Strand = Plus / Minus Query: 1 gacgtgctgggaccggccgggttttccggcggcggagcgcctcccgggctccgcctacct 60 ||||||||||| ||||||||| | |||||||||| ||| |||| |||||||| || || Sbjct: 21603560 gacgtgctggggccggccgggatcgccggcggcggggcggctccggggctccgtctcccg 21603501 Query: 61 ctctccactgtcgccgtcaagcccaagcg---caggccgtccaggctcgtgcagacgcag 117 ||| || | |||||||| ||||||||||| || |||||||| ||| |||||| | | Sbjct: 21603500 ctcgccgccgtcgccgtgaagcccaagcgtccgagatcgtccagggtcgcgcagacccgg 21603441 Query: 118 ccccagccagatgcccggatcccaggcacgcag 150 || ||||| || ||||||||||| || |||||| Sbjct: 21603440 ccgcagcccgaggcccggatccccgggacgcag 21603408 Score = 60.0 bits (30), Expect = 3e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 1070 aaacggttaaccttataaaagaatatcagttacctcaagttcacatatcacagttttatc 1129 |||| ||||||||| ||||| |||||| || ||||| |||||||||||||| || || | Sbjct: 21601217 aaactgttaaccttgtaaaacaatatctattccctcaggttcacatatcacaattctacc 21601158 Query: 1130 ccagaccagg 1139 |||||||||| Sbjct: 21601157 ccagaccagg 21601148 Score = 54.0 bits (27), Expect = 0.002 Identities = 39/43 (90%) Strand = Plus / Minus Query: 147 gcagacgatatacgtcaagacattcgggtgctcacataaccag 189 |||||||||||| || ||||| ||||||||||| ||||||||| Sbjct: 21603319 gcagacgatatatgtgaagacgttcgggtgctcgcataaccag 21603277 Score = 46.1 bits (23), Expect = 0.49 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1786 tggggtggtttggccgtaagttttgccacaacagt 1820 ||||||||||||||||| || |||||||| ||||| Sbjct: 21600317 tggggtggtttggccgtgagctttgccacgacagt 21600283
>emb|AL606706.3|OSJN00063 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0086G13, complete sequence Length = 127952 Score = 293 bits (148), Expect = 1e-75 Identities = 226/252 (89%) Strand = Plus / Minus Query: 282 atgcactgtgaaaaatccaagtcaatctgccatgtcaactctcatatcaaaatgcaagac 341 ||||||||||||||| |||||||| ||||||||| ||||||||||||| || ||||||| Sbjct: 37139 atgcactgtgaaaaacccaagtcagtctgccatgacaactctcatatcgaagtgcaagag 37080 Query: 342 ggcaaacaagccactggttgtagctggctgtgtgccacaaggaagccgggatctgaagga 401 ||||||||||| ||||||| ||||| ||||| ||||||||||||||||||||||| || Sbjct: 37079 tgcaaacaagcctttggttgtggctggatgtgtaccacaaggaagccgggatctgaaaga 37020 Query: 402 gcttgaaggtattagtataataggagtgcagcagatagatcgggttgttgaagtagttga 461 ||||||||||||||| | || |||||||| ||||| || || ||||||||||| ||||| Sbjct: 37019 gcttgaaggtattagcgttattggagtgcaacagattgaccgcgttgttgaagttgttga 36960 Query: 462 ggaaactttaaaagggcatgaggttcggttgttgagtcggaaaacactgccctcacttga 521 ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36959 agaaaccttaaaaggccatgaggttcggttgttgagtcggaaaacactgccctcacttga 36900 Query: 522 tttacccaaggt 533 |||||| ||||| Sbjct: 36899 tttacctaaggt 36888 Score = 246 bits (124), Expect = 3e-61 Identities = 184/204 (90%) Strand = Plus / Minus Query: 730 agggatatcggtacaaatcttccaaatctcttaaatgcaattgttgctgagcttcctgcg 789 ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 36360 agggatatcggtacaaatcttccaaatctattaaatggaattgctgctgagcttcctgcg 36301 Query: 790 gacagaagcacaatgcttcgcatcgggatgacaaatcctcctttcatactggagcatttg 849 ||||||||||| ||||||||||| || ||||| ||||||||||||||| ||||||||||| Sbjct: 36300 gacagaagcacgatgcttcgcattggcatgaccaatcctcctttcatattggagcatttg 36241 Query: 850 aatgagatagctagtattttgcgccatccttgtgtttatactttccttcatgttcccgtg 909 || ||||| |||||| ||||| ||||||| ||||||||| ||||||| || ||||| || Sbjct: 36240 aaggagattgctagtgttttgtgccatccctgtgtttattctttcctccacgttcctgta 36181 Query: 910 caatcgggaagtgatgctgtttta 933 ||||| ||||||||||| |||||| Sbjct: 36180 caatcaggaagtgatgcagtttta 36157 Score = 184 bits (93), Expect = 8e-43 Identities = 132/145 (91%) Strand = Plus / Minus Query: 1299 ggttggacataccaaagggtatatccaggttcttgtcattgctccagatagtatgctagg 1358 |||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 35331 ggttggacataccaaaggatatatccaggtgcttgtcattgctcctgatagcatgttagg 35272 Query: 1359 aacatcagcagatgcgaagatcacatctgtcggaagatggtctgtatttggtgaagtgat 1418 |||||||||||||| ||||||||||||||| || ||||||||||| |||||||||||||| Sbjct: 35271 aacatcagcagatgtgaagatcacatctgttgggagatggtctgtgtttggtgaagtgat 35212 Query: 1419 agaaggaaccattgcagtaaaggaa 1443 ||||||| || ||| || ||||||| Sbjct: 35211 agaaggatccgttgtagcaaaggaa 35187 Score = 168 bits (85), Expect = 5e-38 Identities = 145/165 (87%) Strand = Plus / Minus Query: 1137 aggaacacctgctgctaggatgaagaaagtgcctagcattgaagtgaaaaaacgaagtcg 1196 |||||||||||||||||||||||| || || || ||| |||||||||| ||| | || || Sbjct: 35600 aggaacacctgctgctaggatgaaaaaggttccaagcgttgaagtgaagaaaaggagccg 35541 Query: 1197 tgaattgacgtcagtttttgaagctttttcaccatacgaaggactgaaaggcaaagtgga 1256 ||||||||| |||||||| || | |||||||| ||| ||||| || |||||||||| || Sbjct: 35540 tgaattgacctcagttttcgagtcattttcaccctaccaaggaatggaaggcaaagtaga 35481 Query: 1257 gaggatatggatcactgaaatagctactgatggtgttcatctggt 1301 |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 35480 gaggatatggatcactgaaatagctactgatggtgttcatttggt 35436 Score = 135 bits (68), Expect = 7e-28 Identities = 95/104 (91%) Strand = Plus / Minus Query: 934 caggcaatgaatcgtgaatacactgtcagtgaattcagaatggtagttgatactctctgt 993 |||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||| ||| Sbjct: 36032 caggcaatgaatcgtgaatacactgtgagtgaattcaggagggtagttgacactctttgt 35973 Query: 994 gagcttgtcccgggcatgcaaattgccacggatattatttgtgg 1037 ||||||||||| || ||||||||||| || |||||||||||||| Sbjct: 35972 gagcttgtccctggaatgcaaattgctacagatattatttgtgg 35929 Score = 133 bits (67), Expect = 3e-27 Identities = 88/95 (92%) Strand = Plus / Minus Query: 187 cagagtgacagtgagtacatgtcggggcagctctcggcgtttggatatgcaattactgaa 246 ||||||||||||||||||||||| |||||||| || |||||||||||||| || |||||| Sbjct: 37553 cagagtgacagtgagtacatgtcagggcagctgtcagcgtttggatatgcgatcactgaa 37494 Query: 247 gagcctgaaggagctgatttgtggctaattaacac 281 ||||| |||||||| |||||||||||||||||||| Sbjct: 37493 gagcccgaaggagcggatttgtggctaattaacac 37459 Score = 121 bits (61), Expect = 1e-23 Identities = 97/109 (88%) Strand = Plus / Minus Query: 546 atttattgagattcttcccataaatgtcgggtgtctaggcgcttgcacttactgcaagac 605 |||||| ||||||||||| || ||||| |||||| | || |||||||| ||||||||||| Sbjct: 36725 atttatcgagattcttcctattaatgttgggtgtttgggtgcttgcacatactgcaagac 36666 Query: 606 aaagcatgctcgtggtcatctgggaagctattctatagacagcttggta 654 ||||||||||||||||||||| ||||||||| ||||||| || |||||| Sbjct: 36665 aaagcatgctcgtggtcatcttggaagctatactatagaaagtttggta 36617 Score = 103 bits (52), Expect = 2e-18 Identities = 73/80 (91%) Strand = Plus / Minus Query: 651 ggtagatcgcgtgaaaattgttgtctcagaaggtgttcgtgagatatggttgagcagtga 710 ||||||||| ||||||||||||||||| |||||||| || || ||||||||||| ||||| Sbjct: 36535 ggtagatcgtgtgaaaattgttgtctctgaaggtgtccgagaaatatggttgagtagtga 36476 Query: 711 agatactggtgcttatggta 730 ||||||||||||||||||| Sbjct: 36475 ggatactggtgcttatggta 36456 Score = 69.9 bits (35), Expect = 3e-08 Identities = 124/153 (81%), Gaps = 3/153 (1%) Strand = Plus / Minus Query: 1 gacgtgctgggaccggccgggttttccggcggcggagcgcctcccgggctccgcctacct 60 ||||||||||| ||||||||| | |||||||||| ||| |||| |||||||| || || Sbjct: 38102 gacgtgctggggccggccgggatcgccggcggcggggcggctccggggctccgtctcccg 38043 Query: 61 ctctccactgtcgccgtcaagcccaagcg---caggccgtccaggctcgtgcagacgcag 117 ||| || | |||||||| ||||||||||| || |||||||| ||| |||||| | | Sbjct: 38042 ctcgccgccgtcgccgtgaagcccaagcgtccgagatcgtccagggtcgcgcagacccgg 37983 Query: 118 ccccagccagatgcccggatcccaggcacgcag 150 || ||||| || ||||||||||| || |||||| Sbjct: 37982 ccgcagcccgaggcccggatccccgggacgcag 37950 Score = 60.0 bits (30), Expect = 3e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 1070 aaacggttaaccttataaaagaatatcagttacctcaagttcacatatcacagttttatc 1129 |||| ||||||||| ||||| |||||| || ||||| |||||||||||||| || || | Sbjct: 35759 aaactgttaaccttgtaaaacaatatctattccctcaggttcacatatcacaattctacc 35700 Query: 1130 ccagaccagg 1139 |||||||||| Sbjct: 35699 ccagaccagg 35690 Score = 54.0 bits (27), Expect = 0.002 Identities = 39/43 (90%) Strand = Plus / Minus Query: 147 gcagacgatatacgtcaagacattcgggtgctcacataaccag 189 |||||||||||| || ||||| ||||||||||| ||||||||| Sbjct: 37861 gcagacgatatatgtgaagacgttcgggtgctcgcataaccag 37819 Score = 46.1 bits (23), Expect = 0.49 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1786 tggggtggtttggccgtaagttttgccacaacagt 1820 ||||||||||||||||| || |||||||| ||||| Sbjct: 34859 tggggtggtttggccgtgagctttgccacgacagt 34825
>emb|AL606626.3|OSJN00050 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088K19, complete sequence Length = 156002 Score = 293 bits (148), Expect = 1e-75 Identities = 226/252 (89%) Strand = Plus / Minus Query: 282 atgcactgtgaaaaatccaagtcaatctgccatgtcaactctcatatcaaaatgcaagac 341 ||||||||||||||| |||||||| ||||||||| ||||||||||||| || ||||||| Sbjct: 124686 atgcactgtgaaaaacccaagtcagtctgccatgacaactctcatatcgaagtgcaagag 124627 Query: 342 ggcaaacaagccactggttgtagctggctgtgtgccacaaggaagccgggatctgaagga 401 ||||||||||| ||||||| ||||| ||||| ||||||||||||||||||||||| || Sbjct: 124626 tgcaaacaagcctttggttgtggctggatgtgtaccacaaggaagccgggatctgaaaga 124567 Query: 402 gcttgaaggtattagtataataggagtgcagcagatagatcgggttgttgaagtagttga 461 ||||||||||||||| | || |||||||| ||||| || || ||||||||||| ||||| Sbjct: 124566 gcttgaaggtattagcgttattggagtgcaacagattgaccgcgttgttgaagttgttga 124507 Query: 462 ggaaactttaaaagggcatgaggttcggttgttgagtcggaaaacactgccctcacttga 521 ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124506 agaaaccttaaaaggccatgaggttcggttgttgagtcggaaaacactgccctcacttga 124447 Query: 522 tttacccaaggt 533 |||||| ||||| Sbjct: 124446 tttacctaaggt 124435 Score = 246 bits (124), Expect = 3e-61 Identities = 184/204 (90%) Strand = Plus / Minus Query: 730 agggatatcggtacaaatcttccaaatctcttaaatgcaattgttgctgagcttcctgcg 789 ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 123907 agggatatcggtacaaatcttccaaatctattaaatggaattgctgctgagcttcctgcg 123848 Query: 790 gacagaagcacaatgcttcgcatcgggatgacaaatcctcctttcatactggagcatttg 849 ||||||||||| ||||||||||| || ||||| ||||||||||||||| ||||||||||| Sbjct: 123847 gacagaagcacgatgcttcgcattggcatgaccaatcctcctttcatattggagcatttg 123788 Query: 850 aatgagatagctagtattttgcgccatccttgtgtttatactttccttcatgttcccgtg 909 || ||||| |||||| ||||| ||||||| ||||||||| ||||||| || ||||| || Sbjct: 123787 aaggagattgctagtgttttgtgccatccctgtgtttattctttcctccacgttcctgta 123728 Query: 910 caatcgggaagtgatgctgtttta 933 ||||| ||||||||||| |||||| Sbjct: 123727 caatcaggaagtgatgcagtttta 123704 Score = 184 bits (93), Expect = 8e-43 Identities = 132/145 (91%) Strand = Plus / Minus Query: 1299 ggttggacataccaaagggtatatccaggttcttgtcattgctccagatagtatgctagg 1358 |||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 122878 ggttggacataccaaaggatatatccaggtgcttgtcattgctcctgatagcatgttagg 122819 Query: 1359 aacatcagcagatgcgaagatcacatctgtcggaagatggtctgtatttggtgaagtgat 1418 |||||||||||||| ||||||||||||||| || ||||||||||| |||||||||||||| Sbjct: 122818 aacatcagcagatgtgaagatcacatctgttgggagatggtctgtgtttggtgaagtgat 122759 Query: 1419 agaaggaaccattgcagtaaaggaa 1443 ||||||| || ||| || ||||||| Sbjct: 122758 agaaggatccgttgtagcaaaggaa 122734 Score = 168 bits (85), Expect = 5e-38 Identities = 145/165 (87%) Strand = Plus / Minus Query: 1137 aggaacacctgctgctaggatgaagaaagtgcctagcattgaagtgaaaaaacgaagtcg 1196 |||||||||||||||||||||||| || || || ||| |||||||||| ||| | || || Sbjct: 123147 aggaacacctgctgctaggatgaaaaaggttccaagcgttgaagtgaagaaaaggagccg 123088 Query: 1197 tgaattgacgtcagtttttgaagctttttcaccatacgaaggactgaaaggcaaagtgga 1256 ||||||||| |||||||| || | |||||||| ||| ||||| || |||||||||| || Sbjct: 123087 tgaattgacctcagttttcgagtcattttcaccctaccaaggaatggaaggcaaagtaga 123028 Query: 1257 gaggatatggatcactgaaatagctactgatggtgttcatctggt 1301 |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 123027 gaggatatggatcactgaaatagctactgatggtgttcatttggt 122983 Score = 135 bits (68), Expect = 7e-28 Identities = 95/104 (91%) Strand = Plus / Minus Query: 934 caggcaatgaatcgtgaatacactgtcagtgaattcagaatggtagttgatactctctgt 993 |||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||| ||| Sbjct: 123579 caggcaatgaatcgtgaatacactgtgagtgaattcaggagggtagttgacactctttgt 123520 Query: 994 gagcttgtcccgggcatgcaaattgccacggatattatttgtgg 1037 ||||||||||| || ||||||||||| || |||||||||||||| Sbjct: 123519 gagcttgtccctggaatgcaaattgctacagatattatttgtgg 123476 Score = 133 bits (67), Expect = 3e-27 Identities = 88/95 (92%) Strand = Plus / Minus Query: 187 cagagtgacagtgagtacatgtcggggcagctctcggcgtttggatatgcaattactgaa 246 ||||||||||||||||||||||| |||||||| || |||||||||||||| || |||||| Sbjct: 125100 cagagtgacagtgagtacatgtcagggcagctgtcagcgtttggatatgcgatcactgaa 125041 Query: 247 gagcctgaaggagctgatttgtggctaattaacac 281 ||||| |||||||| |||||||||||||||||||| Sbjct: 125040 gagcccgaaggagcggatttgtggctaattaacac 125006 Score = 121 bits (61), Expect = 1e-23 Identities = 97/109 (88%) Strand = Plus / Minus Query: 546 atttattgagattcttcccataaatgtcgggtgtctaggcgcttgcacttactgcaagac 605 |||||| ||||||||||| || ||||| |||||| | || |||||||| ||||||||||| Sbjct: 124272 atttatcgagattcttcctattaatgttgggtgtttgggtgcttgcacatactgcaagac 124213 Query: 606 aaagcatgctcgtggtcatctgggaagctattctatagacagcttggta 654 ||||||||||||||||||||| ||||||||| ||||||| || |||||| Sbjct: 124212 aaagcatgctcgtggtcatcttggaagctatactatagaaagtttggta 124164 Score = 103 bits (52), Expect = 2e-18 Identities = 73/80 (91%) Strand = Plus / Minus Query: 651 ggtagatcgcgtgaaaattgttgtctcagaaggtgttcgtgagatatggttgagcagtga 710 ||||||||| ||||||||||||||||| |||||||| || || ||||||||||| ||||| Sbjct: 124082 ggtagatcgtgtgaaaattgttgtctctgaaggtgtccgagaaatatggttgagtagtga 124023 Query: 711 agatactggtgcttatggta 730 ||||||||||||||||||| Sbjct: 124022 ggatactggtgcttatggta 124003 Score = 69.9 bits (35), Expect = 3e-08 Identities = 124/153 (81%), Gaps = 3/153 (1%) Strand = Plus / Minus Query: 1 gacgtgctgggaccggccgggttttccggcggcggagcgcctcccgggctccgcctacct 60 ||||||||||| ||||||||| | |||||||||| ||| |||| |||||||| || || Sbjct: 125649 gacgtgctggggccggccgggatcgccggcggcggggcggctccggggctccgtctcccg 125590 Query: 61 ctctccactgtcgccgtcaagcccaagcg---caggccgtccaggctcgtgcagacgcag 117 ||| || | |||||||| ||||||||||| || |||||||| ||| |||||| | | Sbjct: 125589 ctcgccgccgtcgccgtgaagcccaagcgtccgagatcgtccagggtcgcgcagacccgg 125530 Query: 118 ccccagccagatgcccggatcccaggcacgcag 150 || ||||| || ||||||||||| || |||||| Sbjct: 125529 ccgcagcccgaggcccggatccccgggacgcag 125497 Score = 60.0 bits (30), Expect = 3e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 1070 aaacggttaaccttataaaagaatatcagttacctcaagttcacatatcacagttttatc 1129 |||| ||||||||| ||||| |||||| || ||||| |||||||||||||| || || | Sbjct: 123306 aaactgttaaccttgtaaaacaatatctattccctcaggttcacatatcacaattctacc 123247 Query: 1130 ccagaccagg 1139 |||||||||| Sbjct: 123246 ccagaccagg 123237 Score = 54.0 bits (27), Expect = 0.002 Identities = 39/43 (90%) Strand = Plus / Minus Query: 147 gcagacgatatacgtcaagacattcgggtgctcacataaccag 189 |||||||||||| || ||||| ||||||||||| ||||||||| Sbjct: 125408 gcagacgatatatgtgaagacgttcgggtgctcgcataaccag 125366 Score = 46.1 bits (23), Expect = 0.49 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1786 tggggtggtttggccgtaagttttgccacaacagt 1820 ||||||||||||||||| || |||||||| ||||| Sbjct: 122406 tggggtggtttggccgtgagctttgccacgacagt 122372
>gb|BT013138.1| Lycopersicon esculentum clone 114440F, mRNA sequence Length = 2084 Score = 123 bits (62), Expect = 3e-24 Identities = 227/282 (80%) Strand = Plus / Plus Query: 343 gcaaacaagccactggttgtagctggctgtgtgccacaaggaagccgggatctgaaggag 402 ||||| |||||| |||| ||||| || ||||| || ||||||||||| ||||||| ||| Sbjct: 407 gcaaaaaagccattggtagtagcaggttgtgttcctcaaggaagccgtaatctgaaagag 466 Query: 403 cttgaaggtattagtataataggagtgcagcagatagatcgggttgttgaagtagttgag 462 || ||||| |||||||| ||||||| |||||||| || || || ||||| || || || Sbjct: 467 ctggaaggagttagtatagtaggagttcagcagattgaccgtgtggttgaggttgtggaa 526 Query: 463 gaaactttaaaagggcatgaggttcggttgttgagtcggaaaacactgccctcacttgat 522 || ||||| ||||| ||||| |||||| | | | ||||| ||| | || |||||||| Sbjct: 527 gagactttgaaaggtcatgaagttcggctactaacccggaagacattaccagcacttgat 586 Query: 523 ttacccaaggttcgaaagaatagatttattgagattcttcccataaatgtcgggtgtcta 582 | || ||||| |||||||| | ||| ||||||||||||| |||||||| || ||| || Sbjct: 587 cttccaaaggtccgaaagaacaagtttgttgagattcttccaataaatgttggttgttta 646 Query: 583 ggcgcttgcacttactgcaagacaaagcatgctcgtggtcat 624 || ||||| ||||| |||||||| |||||||| ||||||||| Sbjct: 647 ggtgcttgtacttattgcaagactaagcatgcccgtggtcat 688 Score = 101 bits (51), Expect = 1e-17 Identities = 165/203 (81%) Strand = Plus / Plus Query: 1000 gtcccgggcatgcaaattgccacggatattatttgtggctttcctggtgaaaccgatgaa 1059 ||||| || ||||| ||||| || ||||| |||||||| |||||||||||||| |||||| Sbjct: 1064 gtccctgggatgcagattgcaacagatataatttgtggatttcctggtgaaactgatgaa 1123 Query: 1060 gattttgttgaaacggttaaccttataaaagaatatcagttacctcaagttcacatatca 1119 ||||||| | | || ||| ||||||| || || || || | |||||||||| |||||| Sbjct: 1124 gattttgctcagacagttgaccttattaaggactacaagcttgctcaagttcatatatca 1183 Query: 1120 cagttttatcccagaccaggaacacctgctgctaggatgaagaaagtgcctagcattgaa 1179 ||||| ||||| || || || || |||||||| ||||||||||| || ||||| | || Sbjct: 1184 cagttctatcctaggcctggcactcctgctgcaaggatgaagaaggttcctagtaatgtg 1243 Query: 1180 gtgaaaaaacgaagtcgtgaatt 1202 ||||| |||| ||||||||||| Sbjct: 1244 gtgaagcaacgtagtcgtgaatt 1266 Score = 56.0 bits (28), Expect = 5e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 1244 aaggcaaagtggagaggatatggatcactgaaatagctactgatggtgttcatctggttg 1303 |||| ||||| |||||||||||||| ||||| ||||| | ||||| |||||| |||||| Sbjct: 1308 aaggaaaagtagagaggatatggattactgacgtagcttcagatggggttcatttggttg 1367 Query: 1304 gaca 1307 |||| Sbjct: 1368 gaca 1371 Score = 42.1 bits (21), Expect = 7.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 142 ggcacgcagacgatatacgtcaagacattcgggtgctcacataaccagagtga 194 ||||| ||||| || ||| ||||||||||||| || || ||||| |||||||| Sbjct: 206 ggcactcagactatttacatcaagacattcggatgttctcataatcagagtga 258
>ref|NM_105867.2| Arabidopsis thaliana catalytic/ iron ion binding (AT1G72090) mRNA, complete cds Length = 1976 Score = 105 bits (53), Expect = 6e-19 Identities = 332/425 (78%) Strand = Plus / Plus Query: 994 gagcttgtcccgggcatgcaaattgccacggatattatttgtggctttcctggtgaaacc 1053 |||||||| || || ||||||||||| || ||||| || || || ||||||||||||||| Sbjct: 1078 gagcttgtgccaggaatgcaaattgctactgatataatatgcggttttcctggtgaaacc 1137 Query: 1054 gatgaagattttgttgaaacggttaaccttataaaagaatatcagttacctcaagttcac 1113 |||||||||||| | | || ||| | || || || || || |||| ||||||||||| Sbjct: 1138 gatgaagatttttctcagacagttgaactcatcaaggattacaagtttcctcaagttcat 1197 Query: 1114 atatcacagttttatcccagaccaggaacacctgctgctaggatgaagaaagtgcctagc 1173 || || |||||||| ||||||||||| || || || || | ||||||||| || | || Sbjct: 1198 atttctcagttttaccccagaccagggaccccagcagcaaagatgaagaaggtacaaagt 1257 Query: 1174 attgaagtgaaaaaacgaagtcgtgaattgacgtcagtttttgaagctttttcaccatac 1233 | |||||| ||||||| ||||||||||| || || ||||| |||||| | || ||| Sbjct: 1258 aaaatagtgaagcaacgaagccgtgaattgacttctgtctttgaggcttttgcgccttac 1317 Query: 1234 gaaggactgaaaggcaaagtggagaggatatggatcactgaaatagctactgatggtgtt 1293 ||| || | ||| || |||||||||||||| |||||| ||||||||||||| || Sbjct: 1318 accggaatggagtgcagagaagagaggatatggataactgaagtagctactgatggaatt 1377 Query: 1294 catctggttggacataccaaagggtatatccaggttcttgtcattgctccagatagtatg 1353 ||| ||||||||||||| || || ||| | ||||| | || | || ||||| |||||| Sbjct: 1378 catttggttggacatacgaagggatatgtacaggtcttagttactggaccagaaagtatg 1437 Query: 1354 ctaggaacatcagcagatgcgaagatcacatctgtcggaagatggtctgtatttggtgaa 1413 || || || ||||| |||| ||| |||||||| || |||||||| |||||||| ||| Sbjct: 1438 cttgggacttcagctatggcgaggataacatctgtggggagatggtcagtatttggggaa 1497 Query: 1414 gtgat 1418 ||||| Sbjct: 1498 gtgat 1502 Score = 61.9 bits (31), Expect = 8e-06 Identities = 124/155 (80%) Strand = Plus / Plus Query: 139 ccaggcacgcagacgatatacgtcaagacattcgggtgctcacataaccagagtgacagt 198 ||||| || |||||||||||| ||||||| || || || || ||||| |||||||| ||| Sbjct: 223 ccaggaactcagacgatatacatcaagacgtttggatgttctcataatcagagtgatagt 282 Query: 199 gagtacatgtcggggcagctctcggcgtttggatatgcaattactgaagagcctgaagga 258 ||||| ||| | || ||||| || || ||||| ||||| | || |||| || || | | Sbjct: 283 gagtatatggctggtcagctttctgcatttggctatgcgttgacagaagtcccggaggaa 342 Query: 259 gctgatttgtggctaattaacacatgcactgtgaa 293 |||||||| ||||| |||||||| || |||||||| Sbjct: 343 gctgatttatggctcattaacacctgtactgtgaa 377 Score = 52.0 bits (26), Expect = 0.008 Identities = 65/78 (83%) Strand = Plus / Plus Query: 547 tttattgagattcttcccataaatgtcgggtgtctaggcgcttgcacttactgcaagaca 606 ||||| || ||||| ||||| ||||| || ||| | || || || |||||||||||||| Sbjct: 631 tttatcgaaattctccccattaatgttggctgtttgggtgcctgtacttactgcaagacc 690 Query: 607 aagcatgctcgtggtcat 624 |||||||| ||||||||| Sbjct: 691 aagcatgcccgtggtcat 708
>gb|AF367274.1|AF367274 Arabidopsis thaliana At1g72090/F28P5_4 mRNA, complete cds Length = 1977 Score = 79.8 bits (40), Expect = 3e-11 Identities = 133/164 (81%) Strand = Plus / Plus Query: 1255 gagaggatatggatcactgaaatagctactgatggtgttcatctggttggacataccaaa 1314 |||||||||||||| |||||| ||||||||||||| ||||| ||||||||||||| || Sbjct: 1339 gagaggatatggataactgaagtagctactgatggaattcatttggttggacatacgaag 1398 Query: 1315 gggtatatccaggttcttgtcattgctccagatagtatgctaggaacatcagcagatgcg 1374 || ||| | ||||| | || | || ||||| |||||||| || || ||||| ||| Sbjct: 1399 ggatatgtacaggtcttagttactggaccagaaagtatgcttgggacttcagctatggcg 1458 Query: 1375 aagatcacatctgtcggaagatggtctgtatttggtgaagtgat 1418 | ||| |||||||| || |||||||| |||||||| |||||||| Sbjct: 1459 aggataacatctgtggggagatggtcagtatttggggaagtgat 1502 Score = 71.9 bits (36), Expect = 9e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 994 gagcttgtcccgggcatgcaaattgccacggatattatttgtggctttcctggtgaaacc 1053 |||||||| || || ||||||||||| || ||||| || || || ||||||||||||||| Sbjct: 1078 gagcttgtgccaggaatgcaaattgctactgatataatatgcggttttcctggtgaaacc 1137 Query: 1054 gatgaagatttt 1065 |||||||||||| Sbjct: 1138 gatgaagatttt 1149 Score = 61.9 bits (31), Expect = 8e-06 Identities = 124/155 (80%) Strand = Plus / Plus Query: 139 ccaggcacgcagacgatatacgtcaagacattcgggtgctcacataaccagagtgacagt 198 ||||| || |||||||||||| ||||||| || || || || ||||| |||||||| ||| Sbjct: 223 ccaggaactcagacgatatacatcaagacgtttggatgttctcataatcagagtgatagt 282 Query: 199 gagtacatgtcggggcagctctcggcgtttggatatgcaattactgaagagcctgaagga 258 ||||| ||| | || ||||| || || ||||| ||||| | || |||| || || | | Sbjct: 283 gagtatatggctggtcagctttctgcatttggctatgcgttgacagaagtcccggaggaa 342 Query: 259 gctgatttgtggctaattaacacatgcactgtgaa 293 |||||||| ||||| |||||||| || |||||||| Sbjct: 343 gctgatttatggctcattaacacctgtactgtgaa 377 Score = 52.0 bits (26), Expect = 0.008 Identities = 65/78 (83%) Strand = Plus / Plus Query: 547 tttattgagattcttcccataaatgtcgggtgtctaggcgcttgcacttactgcaagaca 606 ||||| || ||||| ||||| ||||| || ||| | || || || |||||||||||||| Sbjct: 631 tttatcgaaattctccccattaatgttggctgtttgggtgcctgtacttactgcaagacc 690 Query: 607 aagcatgctcgtggtcat 624 |||||||| ||||||||| Sbjct: 691 aagcatgcccgtggtcat 708
>gb|BT002712.1| Arabidopsis thaliana At1g72090/F28P5_4 gene, complete cds Length = 1806 Score = 79.8 bits (40), Expect = 3e-11 Identities = 133/164 (81%) Strand = Plus / Plus Query: 1255 gagaggatatggatcactgaaatagctactgatggtgttcatctggttggacataccaaa 1314 |||||||||||||| |||||| ||||||||||||| ||||| ||||||||||||| || Sbjct: 1297 gagaggatatggataactgaagtagctactgatggaattcatttggttggacatacgaag 1356 Query: 1315 gggtatatccaggttcttgtcattgctccagatagtatgctaggaacatcagcagatgcg 1374 || ||| | ||||| | || | || ||||| |||||||| || || ||||| ||| Sbjct: 1357 ggatatgtacaggtcttagttactggaccagaaagtatgcttgggacttcagctatggcg 1416 Query: 1375 aagatcacatctgtcggaagatggtctgtatttggtgaagtgat 1418 | ||| |||||||| || |||||||| |||||||| |||||||| Sbjct: 1417 aggataacatctgtggggagatggtcagtatttggggaagtgat 1460 Score = 71.9 bits (36), Expect = 9e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 994 gagcttgtcccgggcatgcaaattgccacggatattatttgtggctttcctggtgaaacc 1053 |||||||| || || ||||||||||| || ||||| || || || ||||||||||||||| Sbjct: 1036 gagcttgtgccaggaatgcaaattgctactgatataatatgcggttttcctggtgaaacc 1095 Query: 1054 gatgaagatttt 1065 |||||||||||| Sbjct: 1096 gatgaagatttt 1107 Score = 61.9 bits (31), Expect = 8e-06 Identities = 124/155 (80%) Strand = Plus / Plus Query: 139 ccaggcacgcagacgatatacgtcaagacattcgggtgctcacataaccagagtgacagt 198 ||||| || |||||||||||| ||||||| || || || || ||||| |||||||| ||| Sbjct: 181 ccaggaactcagacgatatacatcaagacgtttggatgttctcataatcagagtgatagt 240 Query: 199 gagtacatgtcggggcagctctcggcgtttggatatgcaattactgaagagcctgaagga 258 ||||| ||| | || ||||| || || ||||| ||||| | || |||| || || | | Sbjct: 241 gagtatatggctggtcagctttctgcatttggctatgcgttgacagaagtcccggaggaa 300 Query: 259 gctgatttgtggctaattaacacatgcactgtgaa 293 |||||||| ||||| |||||||| || |||||||| Sbjct: 301 gctgatttatggctcattaacacctgtactgtgaa 335 Score = 52.0 bits (26), Expect = 0.008 Identities = 65/78 (83%) Strand = Plus / Plus Query: 547 tttattgagattcttcccataaatgtcgggtgtctaggcgcttgcacttactgcaagaca 606 ||||| || ||||| ||||| ||||| || ||| | || || || |||||||||||||| Sbjct: 589 tttatcgaaattctccccattaatgttggctgtttgggtgcctgtacttactgcaagacc 648 Query: 607 aagcatgctcgtggtcat 624 |||||||| ||||||||| Sbjct: 649 aagcatgcccgtggtcat 666
>emb|CR855188.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0102D10, complete sequence Length = 78391 Score = 69.9 bits (35), Expect = 3e-08 Identities = 124/153 (81%), Gaps = 3/153 (1%) Strand = Plus / Minus Query: 1 gacgtgctgggaccggccgggttttccggcggcggagcgcctcccgggctccgcctacct 60 ||||||||||| ||||||||| | |||||||||| ||| |||| |||||||| || || Sbjct: 292 gacgtgctggggccggccgggatcgccggcggcggggcggctccggggctccgtctcccg 233 Query: 61 ctctccactgtcgccgtcaagcccaagcg---caggccgtccaggctcgtgcagacgcag 117 ||| || | |||||||| ||||||||||| || |||||||| ||| |||||| | | Sbjct: 232 ctcgccgccgtcgccgtgaagcccaagcgtccgagatcgtccagggtcgcgcagacccgg 173 Query: 118 ccccagccagatgcccggatcccaggcacgcag 150 || ||||| || ||||||||||| || |||||| Sbjct: 172 ccgcagcccgaggcccggatccccgggacgcag 140 Score = 54.0 bits (27), Expect = 0.002 Identities = 39/43 (90%) Strand = Plus / Minus Query: 147 gcagacgatatacgtcaagacattcgggtgctcacataaccag 189 |||||||||||| || ||||| ||||||||||| ||||||||| Sbjct: 51 gcagacgatatatgtgaagacgttcgggtgctcgcataaccag 9
>ref|XM_001098614.1| PREDICTED: Macaca mulatta similar to CDK5 regulatory subunit associated protein 1-like 1, transcript variant 1 (LOC706409), mRNA Length = 3065 Score = 61.9 bits (31), Expect = 8e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 682 ggtgttcgtgagatatggttgagcagtgaagatactggtgcttatggtagggatatcggt 741 |||||| ||||||||||||||| ||||||||| || || |||||||| || ||||| || Sbjct: 798 ggtgtttgtgagatatggttgaccagtgaagacacgggggcttatggcagagatattggc 857 Query: 742 acaaatcttcc 752 || |||||||| Sbjct: 858 accaatcttcc 868
>ref|XM_001098714.1| PREDICTED: Macaca mulatta similar to CDK5 regulatory subunit associated protein 1-like 1, transcript variant 2 (LOC706409), mRNA Length = 2950 Score = 61.9 bits (31), Expect = 8e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 682 ggtgttcgtgagatatggttgagcagtgaagatactggtgcttatggtagggatatcggt 741 |||||| ||||||||||||||| ||||||||| || || |||||||| || ||||| || Sbjct: 620 ggtgtttgtgagatatggttgaccagtgaagacacgggggcttatggcagagatattggc 679 Query: 742 acaaatcttcc 752 || |||||||| Sbjct: 680 accaatcttcc 690
>ref|XM_001098819.1| PREDICTED: Macaca mulatta similar to CDK5 regulatory subunit associated protein 1-like 1, transcript variant 3 (LOC706409), mRNA Length = 3218 Score = 61.9 bits (31), Expect = 8e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 682 ggtgttcgtgagatatggttgagcagtgaagatactggtgcttatggtagggatatcggt 741 |||||| ||||||||||||||| ||||||||| || || |||||||| || ||||| || Sbjct: 888 ggtgtttgtgagatatggttgaccagtgaagacacgggggcttatggcagagatattggc 947 Query: 742 acaaatcttcc 752 || |||||||| Sbjct: 948 accaatcttcc 958
>emb|AL513549.13| Human DNA sequence from clone RP11-424H23 on chromosome 6 Contains part of a novel gene (FLJ20342), complete sequence Length = 131374 Score = 58.0 bits (29), Expect = 1e-04 Identities = 53/61 (86%) Strand = Plus / Plus Query: 677 cagaaggtgttcgtgagatatggttgagcagtgaagatactggtgcttatggtagggata 736 |||| |||||| ||||||||||||||| ||||||||| || || |||||||| || |||| Sbjct: 112500 cagagggtgtttgtgagatatggttgaccagtgaagacacgggggcttatggcagagata 112559 Query: 737 t 737 | Sbjct: 112560 t 112560
>ref|XM_001171067.1| PREDICTED: Pan troglodytes CDK5 regulatory subunit associated protein 1-like 1, transcript variant 1 (CDKAL1), mRNA Length = 3111 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 682 ggtgttcgtgagatatggttgagcagtgaagatactggtgcttatggtagggatat 737 |||||| ||||||||||||||| ||||||||| || || |||||||| || ||||| Sbjct: 806 ggtgtttgtgagatatggttgaccagtgaagacacgggggcttatggcagagatat 861
>ref|XM_001171147.1| PREDICTED: Pan troglodytes CDK5 regulatory subunit associated protein 1-like 1, transcript variant 2 (CDKAL1), mRNA Length = 3174 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 682 ggtgttcgtgagatatggttgagcagtgaagatactggtgcttatggtagggatat 737 |||||| ||||||||||||||| ||||||||| || || |||||||| || ||||| Sbjct: 806 ggtgtttgtgagatatggttgaccagtgaagacacgggggcttatggcagagatat 861
>ref|XM_001171194.1| PREDICTED: Pan troglodytes CDK5 regulatory subunit associated protein 1-like 1, transcript variant 4 (CDKAL1), mRNA Length = 2068 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 682 ggtgttcgtgagatatggttgagcagtgaagatactggtgcttatggtagggatat 737 |||||| ||||||||||||||| ||||||||| || || |||||||| || ||||| Sbjct: 919 ggtgtttgtgagatatggttgaccagtgaagacacgggggcttatggcagagatat 974
>ref|XM_001171227.1| PREDICTED: Pan troglodytes CDK5 regulatory subunit associated protein 1-like 1, transcript variant 5 (CDKAL1), mRNA Length = 3287 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 682 ggtgttcgtgagatatggttgagcagtgaagatactggtgcttatggtagggatat 737 |||||| ||||||||||||||| ||||||||| || || |||||||| || ||||| Sbjct: 919 ggtgtttgtgagatatggttgaccagtgaagacacgggggcttatggcagagatat 974
>ref|XM_001171161.1| PREDICTED: Pan troglodytes CDK5 regulatory subunit associated protein 1-like 1, transcript variant 3 (CDKAL1), mRNA Length = 3673 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 682 ggtgttcgtgagatatggttgagcagtgaagatactggtgcttatggtagggatat 737 |||||| ||||||||||||||| ||||||||| || || |||||||| || ||||| Sbjct: 1305 ggtgtttgtgagatatggttgaccagtgaagacacgggggcttatggcagagatat 1360
>gb|BC121021.1| Homo sapiens CDK5 regulatory subunit associated protein 1-like 1, mRNA (cDNA clone MGC:149680 IMAGE:40117363), complete cds Length = 1960 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 682 ggtgttcgtgagatatggttgagcagtgaagatactggtgcttatggtagggatat 737 |||||| ||||||||||||||| ||||||||| || || |||||||| || ||||| Sbjct: 842 ggtgtttgtgagatatggttgaccagtgaagacacgggggcttatggcagagatat 897
>gb|BC121020.1| Homo sapiens CDK5 regulatory subunit associated protein 1-like 1, mRNA (cDNA clone MGC:149679 IMAGE:40117357), complete cds Length = 1960 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 682 ggtgttcgtgagatatggttgagcagtgaagatactggtgcttatggtagggatat 737 |||||| ||||||||||||||| ||||||||| || || |||||||| || ||||| Sbjct: 842 ggtgtttgtgagatatggttgaccagtgaagacacgggggcttatggcagagatat 897
>ref|NM_017774.2| Homo sapiens CDK5 regulatory subunit associated protein 1-like 1 (CDKAL1), mRNA Length = 2408 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 682 ggtgttcgtgagatatggttgagcagtgaagatactggtgcttatggtagggatat 737 |||||| ||||||||||||||| ||||||||| || || |||||||| || ||||| Sbjct: 919 ggtgtttgtgagatatggttgaccagtgaagacacgggggcttatggcagagatat 974
>gb|BC070521.1| Xenopus laevis hypothetical protein MGC78779, mRNA (cDNA clone MGC:78779 IMAGE:3400926), complete cds Length = 2639 Score = 56.0 bits (28), Expect = 5e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 1014 aattgccacggatattatttgtggctttcctggtgaaaccgatgaagatttt 1065 |||||| ||||| || |||||||||||||| || ||||| |||||||||||| Sbjct: 1186 aattgctacggacatcatttgtggctttccaggagaaacagatgaagatttt 1237
>dbj|AK128546.1| Homo sapiens cDNA FLJ46705 fis, clone TRACH3015346 Length = 3094 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 682 ggtgttcgtgagatatggttgagcagtgaagatactggtgcttatggtagggatat 737 |||||| ||||||||||||||| ||||||||| || || |||||||| || ||||| Sbjct: 799 ggtgtttgtgagatatggttgaccagtgaagacacgggggcttatggcagagatat 854
>dbj|AK000349.1| Homo sapiens cDNA FLJ20342 fis, clone HEP13572 Length = 2642 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 682 ggtgttcgtgagatatggttgagcagtgaagatactggtgcttatggtagggatat 737 |||||| ||||||||||||||| ||||||||| || || |||||||| || ||||| Sbjct: 850 ggtgtttgtgagatatggttgaccagtgaagacacgggggcttatggcagagatat 905
>ref|NM_144536.2| Mus musculus CDK5 regulatory subunit associated protein 1-like 1 (Cdkal1), mRNA Length = 2538 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 1015 attgccacggatattatttgtggctttcctggtgaaaccgatgaagatttt 1065 ||||| ||||||||||| ||||| |||||||| ||||||||| | |||||| Sbjct: 1139 attgctacggatattatctgtggttttcctggagaaaccgatcaggatttt 1189
>ref|XM_001061875.1| PREDICTED: Rattus norvegicus CDK5 regulatory subunit associated protein 1-like 1 (predicted) (Cdkal1_predicted), mRNA Length = 1960 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 1015 attgccacggatattatttgtggctttcctggtgaaaccgatgaagatttt 1065 ||||| ||||||||||| ||||| |||||||| ||||||||| | |||||| Sbjct: 1182 attgctacggatattatctgtggttttcctggagaaaccgatcaggatttt 1232
>ref|XM_341524.3| PREDICTED: Rattus norvegicus CDK5 regulatory subunit associated protein 1-like 1 (predicted) (Cdkal1_predicted), mRNA Length = 1960 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 1015 attgccacggatattatttgtggctttcctggtgaaaccgatgaagatttt 1065 ||||| ||||||||||| ||||| |||||||| ||||||||| | |||||| Sbjct: 1182 attgctacggatattatctgtggttttcctggagaaaccgatcaggatttt 1232
>gb|BC016073.1| Mus musculus CDK5 regulatory subunit associated protein 1-like 1, mRNA (cDNA clone MGC:27555 IMAGE:4482130), complete cds Length = 2551 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 1015 attgccacggatattatttgtggctttcctggtgaaaccgatgaagatttt 1065 ||||| ||||||||||| ||||| |||||||| ||||||||| | |||||| Sbjct: 1139 attgctacggatattatctgtggttttcctggagaaaccgatcaggatttt 1189
>ref|XM_545362.2| PREDICTED: Canis familiaris similar to CDK5 regulatory subunit associated protein 1-like 1, transcript variant 1 (LOC488240), mRNA Length = 2054 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 682 ggtgttcgtgagatatggttgagcagtgaagatactggtgcttatgg 728 |||||| ||||||||||||||| ||||||||| || || |||||||| Sbjct: 742 ggtgtttgtgagatatggttgaccagtgaagacacaggggcttatgg 788 Score = 50.1 bits (25), Expect = 0.031 Identities = 28/29 (96%) Strand = Plus / Plus Query: 1120 cagttttatcccagaccaggaacacctgc 1148 ||||||||||||||||||||||| ||||| Sbjct: 1174 cagttttatcccagaccaggaactcctgc 1202
>ref|XM_844340.1| PREDICTED: Canis familiaris similar to CDK5 regulatory subunit associated protein 1-like 1, transcript variant 3 (LOC488240), mRNA Length = 2117 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 682 ggtgttcgtgagatatggttgagcagtgaagatactggtgcttatgg 728 |||||| ||||||||||||||| ||||||||| || || |||||||| Sbjct: 742 ggtgtttgtgagatatggttgaccagtgaagacacaggggcttatgg 788 Score = 50.1 bits (25), Expect = 0.031 Identities = 28/29 (96%) Strand = Plus / Plus Query: 1120 cagttttatcccagaccaggaacacctgc 1148 ||||||||||||||||||||||| ||||| Sbjct: 1174 cagttttatcccagaccaggaactcctgc 1202
>dbj|AK158546.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K230010G22 product:CDK5 regulatory subunit associated protein 1-like 1, full insert sequence Length = 2013 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 1015 attgccacggatattatttgtggctttcctggtgaaaccgatgaagatttt 1065 ||||| ||||||||||| ||||| |||||||| ||||||||| | |||||| Sbjct: 1188 attgctacggatattatctgtggttttcctggagaaaccgatcaggatttt 1238
>dbj|AK018346.1| Mus musculus 12 days embryo female ovary cDNA, RIKEN full-length enriched library, clone:6620401C13 product:weakly similar to CG6550 PROTEIN (GH28477P) [Drosophila melanogaster], full insert sequence Length = 2021 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 1015 attgccacggatattatttgtggctttcctggtgaaaccgatgaagatttt 1065 ||||| ||||||||||| ||||| |||||||| ||||||||| | |||||| Sbjct: 1196 attgctacggatattatctgtggttttcctggagaaaccgatcaggatttt 1246
>dbj|AK004490.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1190005B03 product:CDK5 regulatory subunit associated protein 1-like 1, full insert sequence Length = 1417 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 1015 attgccacggatattatttgtggctttcctggtgaaaccgatgaagatttt 1065 ||||| ||||||||||| ||||| |||||||| ||||||||| | |||||| Sbjct: 25 attgctacggatattatctgtggttttcctggagaaaccgatcaggatttt 75
>dbj|AK082629.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230071H14 product:hypothetical Uncharacterized protein family UPF0004 containing protein, full insert sequence Length = 3372 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 1015 attgccacggatattatttgtggctttcctggtgaaaccgatgaagatttt 1065 ||||| ||||||||||| ||||| |||||||| ||||||||| | |||||| Sbjct: 1198 attgctacggatattatctgtggttttcctggagaaaccgatcaggatttt 1248
>emb|AL645587.9| Mouse DNA sequence from clone RP23-171O15 on chromosome 13 Contains part of a novel gene, complete sequence Length = 150986 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Minus Query: 1015 attgccacggatattatttgtggctttcctggtgaaaccgatgaagatttt 1065 ||||| ||||||||||| ||||| |||||||| ||||||||| | |||||| Sbjct: 24244 attgctacggatattatctgtggttttcctggagaaaccgatcaggatttt 24194
>gb|AC069273.4|AC069273 Arabidopsis thaliana chromosome 1 BAC F28P5 genomic sequence, complete sequence Length = 38629 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Minus Query: 1255 gagaggatatggatcactgaaatagctactgatgg 1289 |||||||||||||| |||||| ||||||||||||| Sbjct: 15251 gagaggatatggataactgaagtagctactgatgg 15217 Score = 52.0 bits (26), Expect = 0.008 Identities = 65/78 (83%) Strand = Plus / Minus Query: 547 tttattgagattcttcccataaatgtcgggtgtctaggcgcttgcacttactgcaagaca 606 ||||| || ||||| ||||| ||||| || ||| | || || || |||||||||||||| Sbjct: 16542 tttatcgaaattctccccattaatgttggctgtttgggtgcctgtacttactgcaagacc 16483 Query: 607 aagcatgctcgtggtcat 624 |||||||| ||||||||| Sbjct: 16482 aagcatgcccgtggtcat 16465 Score = 48.1 bits (24), Expect = 0.12 Identities = 81/100 (81%) Strand = Plus / Minus Query: 1040 ttcctggtgaaaccgatgaagattttgttgaaacggttaaccttataaaagaatatcagt 1099 |||| ||||||||||||||||||||| | | || ||| | || || || || || ||| Sbjct: 15560 ttccaggtgaaaccgatgaagatttttctcagacagttgaactcatcaaggattacaagt 15501 Query: 1100 tacctcaagttcacatatcacagttttatcccagaccagg 1139 | ||||||||||| || || |||||||| ||||||||||| Sbjct: 15500 ttcctcaagttcatatttctcagttttaccccagaccagg 15461
>dbj|AK173933.1| Ciona intestinalis cDNA, clone:ciad038o02, full insert sequence Length = 1811 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 691 gagatatggttgagcagtgaagatactggtgcttatggt 729 ||||||||||||| |||||||| ||||||||||||||| Sbjct: 793 gagatatggttgacaagtgaagacactggtgcttatggt 831
>ref|XM_001019710.1| Tetrahymena thermophila SB210 MiaB-like tRNA modifying enzyme, archaeal-type family protein (TTHERM_00136290) mRNA, complete cds Length = 1725 Score = 52.0 bits (26), Expect = 0.008 Identities = 29/30 (96%) Strand = Plus / Plus Query: 708 tgaagatactggtgcttatggtagggatat 737 |||||||||||||||||||||||| ||||| Sbjct: 741 tgaagatactggtgcttatggtagagatat 770
>ref|XM_765240.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_393_20381_21958) partial mRNA Length = 1578 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1024 gatattatttgtggctttcctggtgaaaccgatgaaga 1061 ||||| || |||||||||||||| |||||||||||||| Sbjct: 1105 gatataatatgtggctttcctggcgaaaccgatgaaga 1142
>gb|BC114871.1| Bos taurus cDNA clone IMAGE:8185602, partial cds Length = 1380 Score = 48.1 bits (24), Expect = 0.12 Identities = 30/32 (93%) Strand = Plus / Plus Query: 682 ggtgttcgtgagatatggttgagcagtgaaga 713 |||||| ||||||||||||||| ||||||||| Sbjct: 873 ggtgtttgtgagatatggttgaccagtgaaga 904
>emb|AJ965256.1| Dehalococcoides sp. CBDB1 complete genome Length = 1395502 Score = 48.1 bits (24), Expect = 0.12 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1039 tttcctggtgaaaccgatgaagattttg 1066 |||||||| ||||||||||||||||||| Sbjct: 752525 tttcctggagaaaccgatgaagattttg 752498
>ref|XM_418914.2| PREDICTED: Gallus gallus similar to CDK5 regulatory subunit associated protein 1-like 1 (LOC420823), mRNA Length = 2147 Score = 46.1 bits (23), Expect = 0.49 Identities = 41/47 (87%) Strand = Plus / Plus Query: 682 ggtgttcgtgagatatggttgagcagtgaagatactggtgcttatgg 728 |||||| ||||||||||| ||| ||||||||| || || |||||||| Sbjct: 787 ggtgtttgtgagatatggctgaccagtgaagacacaggggcttatgg 833 Score = 44.1 bits (22), Expect = 1.9 Identities = 46/54 (85%) Strand = Plus / Plus Query: 415 agtataataggagtgcagcagatagatcgggttgttgaagtagttgaggaaact 468 ||||| ||||| || |||||||||||||| || || ||||| || ||||||||| Sbjct: 496 agtattataggggttcagcagatagatcgtgtagtagaagttgtggaggaaact 549
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome Length = 2401520 Score = 46.1 bits (23), Expect = 0.49 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1036 ggctttcctggtgaaaccgatgaagattttg 1066 ||||||||||| |||||||| |||||||||| Sbjct: 1253637 ggctttcctggagaaaccgaagaagattttg 1253607
>ref|NM_001077631.1| Mus musculus RIKEN cDNA 2010321M09 gene (2010321M09Rik), transcript variant 2, mRNA Length = 2889 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 355 ctggttgtagctggctgtgtgc 376 |||||||||||||||||||||| Sbjct: 420 ctggttgtagctggctgtgtgc 441
>ref|NM_175153.3| Mus musculus RIKEN cDNA 2010321M09 gene (2010321M09Rik), transcript variant 1, mRNA Length = 3103 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 355 ctggttgtagctggctgtgtgc 376 |||||||||||||||||||||| Sbjct: 634 ctggttgtagctggctgtgtgc 655
>ref|NM_001075571.1| Bos taurus similar to Troponin C-akin-1 protein (MGC140053), mRNA gb|BC118322.1| Bos taurus similar to Troponin C-akin-1 protein, mRNA (cDNA clone MGC:140053 IMAGE:8287068), complete cds Length = 1346 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 201 gtacatgtcggggcagctctcg 222 |||||||||||||||||||||| Sbjct: 631 gtacatgtcggggcagctctcg 610
>ref|XM_396696.3| PREDICTED: Apis mellifera similar to CG6550-PA (LOC413250), mRNA Length = 1022 Score = 44.1 bits (22), Expect = 1.9 Identities = 52/62 (83%) Strand = Plus / Plus Query: 415 agtataataggagtgcagcagatagatcgggttgttgaagtagttgaggaaactttaaaa 474 ||||| ||||| ||||| || || ||||| || ||||||||||| || |||||| ||||| Sbjct: 672 agtatgataggcgtgcaacaaatcgatcgtgtggttgaagtagtcgaagaaactctaaaa 731 Query: 475 gg 476 || Sbjct: 732 gg 733
>gb|BC024913.1| Mus musculus RIKEN cDNA 2010321M09 gene, mRNA (cDNA clone MGC:28004 IMAGE:3602181), complete cds Length = 2814 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 355 ctggttgtagctggctgtgtgc 376 |||||||||||||||||||||| Sbjct: 325 ctggttgtagctggctgtgtgc 346
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1055 atgaagattttgttgaaacggt 1076 |||||||||||||||||||||| Sbjct: 1398523 atgaagattttgttgaaacggt 1398544
>dbj|AK169772.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430021H13 product:Similar to hypothetical protein DKFZp564O1664 (Hypothetical integrin A), full insert sequence Length = 2515 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 355 ctggttgtagctggctgtgtgc 376 |||||||||||||||||||||| Sbjct: 380 ctggttgtagctggctgtgtgc 401
>dbj|AK168222.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730069E04 product:Similar to hypothetical protein DKFZp564O1664 (Hypothetical integrin A), full insert sequence Length = 2467 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 355 ctggttgtagctggctgtgtgc 376 |||||||||||||||||||||| Sbjct: 323 ctggttgtagctggctgtgtgc 344
>dbj|AK221306.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL25-02-C21 Length = 506 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1879 ttgtaactgtaattttttgttt 1900 |||||||||||||||||||||| Sbjct: 435 ttgtaactgtaattttttgttt 456
>dbj|AK035654.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530081M07 product:hypothetical Integrin A (or I) domain structure containing protein, full insert sequence Length = 2562 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 355 ctggttgtagctggctgtgtgc 376 |||||||||||||||||||||| Sbjct: 348 ctggttgtagctggctgtgtgc 369
>dbj|AK032095.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330583L10 product:hypothetical Integrin A (or I) domain structure containing protein, full insert sequence Length = 2839 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 355 ctggttgtagctggctgtgtgc 376 |||||||||||||||||||||| Sbjct: 635 ctggttgtagctggctgtgtgc 656
>dbj|AK086850.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030004K23 product:hypothetical protein, full insert sequence Length = 1561 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 355 ctggttgtagctggctgtgtgc 376 |||||||||||||||||||||| Sbjct: 333 ctggttgtagctggctgtgtgc 354
>dbj|AK050654.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:C920029N22 product:hypothetical protein, full insert sequence Length = 1800 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 355 ctggttgtagctggctgtgtgc 376 |||||||||||||||||||||| Sbjct: 627 ctggttgtagctggctgtgtgc 648
>dbj|AK041578.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630022D24 product:Hypothetical integrin A homolog [Mus musculus], full insert sequence Length = 1266 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 355 ctggttgtagctggctgtgtgc 376 |||||||||||||||||||||| Sbjct: 336 ctggttgtagctggctgtgtgc 357
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 55 ctacctctctccactgtcgccg 76 |||||||||||||||||||||| Sbjct: 6304800 ctacctctctccactgtcgccg 6304821
>gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5I8 sequence, complete sequence Length = 96183 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1879 ttgtaactgtaattttttgttt 1900 |||||||||||||||||||||| Sbjct: 15909 ttgtaactgtaattttttgttt 15930
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1055 atgaagattttgttgaaacggt 1076 |||||||||||||||||||||| Sbjct: 1322194 atgaagattttgttgaaacggt 1322215
>gb|AC009243.3|AC009243 Genomic sequence for Arabidopsis thaliana BAC F28K19 from chromosome I, complete sequence Length = 110565 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1879 ttgtaactgtaattttttgttt 1900 |||||||||||||||||||||| Sbjct: 85754 ttgtaactgtaattttttgttt 85733
>gb|AC135587.3| Homo sapiens 3 BAC RP11-309B5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 71577 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1306 cataccaaagggtatatccagg 1327 |||||||||||||||||||||| Sbjct: 12392 cataccaaagggtatatccagg 12371
>gb|AC104474.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024O21, complete sequence Length = 155651 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 55 ctacctctctccactgtcgccg 76 |||||||||||||||||||||| Sbjct: 118795 ctacctctctccactgtcgccg 118816
>gb|AC122463.4| Mus musculus BAC clone RP24-296C19 from 9, complete sequence Length = 162528 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 355 ctggttgtagctggctgtgtgc 376 |||||||||||||||||||||| Sbjct: 19416 ctggttgtagctggctgtgtgc 19437
>gb|CP000447.1| Shewanella frigidimarina NCIMB 400, complete genome Length = 4845257 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1622 attatggtgatgccactcgtc 1642 ||||||||||||||||||||| Sbjct: 2693023 attatggtgatgccactcgtc 2693003
>gb|AC188386.3| Callithrix jacchus BAC clone CH259-9H12 from chromosome unknown, complete sequence Length = 185762 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 aatagatttattgagattctt 561 ||||||||||||||||||||| Sbjct: 184558 aatagatttattgagattctt 184578
>gb|AC148818.15| Medicago truncatula clone mth2-39c7, complete sequence Length = 141746 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 529 aaggttcgaaagaatagattt 549 ||||||||||||||||||||| Sbjct: 134424 aaggttcgaaagaatagattt 134404
>gb|AC146720.23| Medicago truncatula clone mth2-17n5, complete sequence Length = 126477 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 456 agttgaggaaactttaaaagg 476 ||||||||||||||||||||| Sbjct: 54828 agttgaggaaactttaaaagg 54848
>ref|XM_419622.1| PREDICTED: Gallus gallus similar to organic cation transporter 2 (LOC421584), mRNA Length = 1735 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1792 ggtttggccgtaagttttgcc 1812 ||||||||||||||||||||| Sbjct: 515 ggtttggccgtaagttttgcc 535
>gb|AC009695.7| Homo sapiens chromosome 8, clone RP11-130C12, complete sequence Length = 144328 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 457 gttgaggaaactttaaaaggg 477 ||||||||||||||||||||| Sbjct: 2738 gttgaggaaactttaaaaggg 2758
>gb|AC022716.13| Homo sapiens chromosome 8, clone RP11-135I5, complete sequence Length = 163495 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 457 gttgaggaaactttaaaaggg 477 ||||||||||||||||||||| Sbjct: 18393 gttgaggaaactttaaaaggg 18373
>emb|BX072559.10| Zebrafish DNA sequence from clone CH211-272F15 in linkage group 20, complete sequence Length = 156196 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 aacacatgcactgtgaaaaat 297 ||||||||||||||||||||| Sbjct: 39696 aacacatgcactgtgaaaaat 39676
>gb|AC139882.29| Medicago truncatula clone mth2-32f21, complete sequence Length = 115770 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 529 aaggttcgaaagaatagattt 549 ||||||||||||||||||||| Sbjct: 25368 aaggttcgaaagaatagattt 25348 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 365,491,109 Number of extensions: 18893098 Number of successful extensions: 98585 Number of sequences better than 10.0: 76 Number of HSP's gapped: 98583 Number of HSP's successfully gapped: 146 Length of query: 1994 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1971 Effective length of database: 18,503,978,556 Effective search space: 36471341733876 Effective search space used: 36471341733876 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
