| Clone Name | FLbaf102p13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK058445:Os01g0513700 | 278 | 4e-75 | 2 | AK068877:Os01g0513700 | 272 | 2e-73 | 3 | AK058258:Os07g0454700 | 55 | 6e-08 | 4 | AK060244:Os09g0541500 | 31 | 0.96 | 5 | Os03g0102300:Os03g0102300 | 30 | 1.6 | 6 | Os01g0649400:Os01g0649400 | 29 | 4.7 | 7 | AK107036:Os02g0714300 | 29 | 4.7 | 8 | Os04g0354200:Os04g0354200 | 28 | 8.1 | 9 | AK110124: | 28 | 8.1 |
|---|
>AK058445:Os01g0513700 | Length = 179 Score = 278 bits (710), Expect = 4e-75 Identities = 130/148 (87%), Positives = 139/148 (93%) Frame = +3 Query: 165 NAQVIYVFNRNGVCLLYREWHRPLRTLARNQDQKLMFGLLFSLRSFTAKIDPTSTEHANL 344 NAQV+YVFNR GVCLLYREWHRPLRTL QDQKLMFGLLFSLRSFTAKIDPT+ E NL Sbjct: 32 NAQVLYVFNRGGVCLLYREWHRPLRTLDPTQDQKLMFGLLFSLRSFTAKIDPTTAEKGNL 91 Query: 345 GAPLLPGQGCSFHSFKTNTYKLNYMESPSGIKLILLTHPRTGDQRDALKHIYSLYVEYVV 524 G PLLPGQGCSF+SFKTNTYKLN++ESPSGIKLIL+THPRTGDQRD LKHIY+LYVEYVV Sbjct: 92 GVPLLPGQGCSFYSFKTNTYKLNFLESPSGIKLILITHPRTGDQRDTLKHIYNLYVEYVV 151 Query: 525 KNPLYAPGSPIKCDLFNKHLDQYVKTLI 608 KNPLYAPG+PIKC+LFNKHLDQYVKTLI Sbjct: 152 KNPLYAPGTPIKCELFNKHLDQYVKTLI 179
>AK068877:Os01g0513700 | Length = 180 Score = 272 bits (695), Expect = 2e-73 Identities = 129/149 (86%), Positives = 139/149 (93%), Gaps = 1/149 (0%) Frame = +3 Query: 165 NAQVIYVFNRNGVCLLYREWHRPLRTLARNQDQKLMFGLLFSLRSFTAKIDPTSTEHANL 344 NAQV+YVFNR GVCLLYREWHRPLRTL QDQKLMFGLLFSLRSFTAKIDPT+ E NL Sbjct: 32 NAQVLYVFNRGGVCLLYREWHRPLRTLDPTQDQKLMFGLLFSLRSFTAKIDPTTAEKGNL 91 Query: 345 GAPLLPGQGCSFHSFKTNTYKLNYMESPSGIKLILLTHPRTGDQRDALKHIYSLYVEYVV 524 G PLLPGQGCSF+SFKTNTYKLN++ESPSGIKLIL+THPRTGDQRD LKHIY+LYVEYVV Sbjct: 92 GVPLLPGQGCSFYSFKTNTYKLNFLESPSGIKLILITHPRTGDQRDTLKHIYNLYVEYVV 151 Query: 525 KNPLYAPGSPI-KCDLFNKHLDQYVKTLI 608 KNPLYAPG+PI +C+LFNKHLDQYVKTLI Sbjct: 152 KNPLYAPGTPINRCELFNKHLDQYVKTLI 180
>AK058258:Os07g0454700 | Length = 143 Score = 55.1 bits (131), Expect = 6e-08 Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 1/142 (0%) Frame = +3 Query: 177 IYVFNRNGVCLLYREWHRPLRTLARNQDQKLMFGLLFSLRSFTAKIDPTSTEHANLGAPL 356 +++ N++G + Y+++ RT D + L S+ + + ++ PT Sbjct: 9 LFIINKSGGLIYYKDYGSAGRT--DTNDSLRLASLWHSMHAISQQLSPTP---------- 56 Query: 357 LPGQGCS-FHSFKTNTYKLNYMESPSGIKLILLTHPRTGDQRDALKHIYSLYVEYVVKNP 533 GC + + + L+ +S +G K + + LK IY LY ++V+KNP Sbjct: 57 ----GCEGIDLLQAHNFDLHCFQSLTGTKFFAVCETGAQNIETLLKVIYELYTDFVLKNP 112 Query: 534 LYAPGSPIKCDLFNKHLDQYVK 599 Y PI+C+LF+ +L Q ++ Sbjct: 113 FYEMEMPIRCELFDLNLAQVIQ 134
>AK060244:Os09g0541500 | Length = 187 Score = 31.2 bits (69), Expect = 0.96 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 3/75 (4%) Frame = +3 Query: 387 FKTNTYKLNYMESPSGIKLILLTHP---RTGDQRDALKHIYSLYVEYVVKNPLYAPGSPI 557 + T YK+ + + +K I++T + D R+ + ++ YV+ V NP + PG I Sbjct: 107 YPTENYKVYGYLTNTKVKFIMVTTDLDVKDADARNFFRKFHAAYVD-AVSNPFHVPGKKI 165 Query: 558 KCDLFNKHLDQYVKT 602 F + VK+ Sbjct: 166 ASRSFGARVSTIVKS 180
>Os03g0102300:Os03g0102300 | Length = 1759 Score = 30.4 bits (67), Expect = 1.6 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Frame = +3 Query: 408 LNYMESPSGIKL---ILLTHPRTGDQR--DALKHIYSLYVEYVVKNPLYAPGSPIKCDLF 572 LN ++SPS ++ ++ H G + D I SL+ + P +AP KCD+ Sbjct: 176 LNLLQSPSNDQIHDIVIFLHQTDGLSKHMDTFNTIISLFK--TKETPFFAPTPFNKCDIQ 233 Query: 573 NKHLD 587 ++HLD Sbjct: 234 SRHLD 238
>Os01g0649400:Os01g0649400 | Length = 205 Score = 28.9 bits (63), Expect = 4.7 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 5/47 (10%) Frame = +3 Query: 267 LMFGL-LFSLRSFT----AKIDPTSTEHANLGAPLLPGQGCSFHSFK 392 LM G+ + +RSFT AKI T TE LGA L GC + +K Sbjct: 96 LMSGVPIEKIRSFTPSVIAKISSTITELIGLGAKTLVVPGCGYGEYK 142
>AK107036:Os02g0714300 | Length = 486 Score = 28.9 bits (63), Expect = 4.7 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Frame = -1 Query: 320 GVDLGGK*AQGEEESEHKLLVLVASERAEW------PVPLAVQQAHAVAVEDVDHLGVGA 159 G + G+ + EEE E + V VA ERA W P P A A +D + + A Sbjct: 25 GEEAAGRAVEVEEEEEEEEAVPVAEERAAWGGGGTPPTPEPKSDADAEGAGSLDRVELNA 84
>Os04g0354200:Os04g0354200 | Length = 885 Score = 28.1 bits (61), Expect = 8.1 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +1 Query: 277 DSSSPCAHLPPRSTPPQQNTPILGRHYCQVRDAH 378 D+ A +PP PQ TP+LG+ + RDA+ Sbjct: 104 DNVDSSAVIPPEYADPQILTPMLGQRFKTERDAY 137
>AK110124: | Length = 831 Score = 28.1 bits (61), Expect = 8.1 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Frame = +1 Query: 235 SARSLATRTRSLCSDSSSPCAHLPPRSTPPQQNTPILGRH--YCQVRDA 375 S+R CS + P + PP STP +++ GR C+VR+A Sbjct: 84 SSRCARAPPSQRCSSPTLPSSTAPPPSTPASRHSRSSGRQTAVCRVRNA 132 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 25,122,384 Number of extensions: 573205 Number of successful extensions: 1681 Number of sequences better than 10.0: 9 Number of HSP's gapped: 1680 Number of HSP's successfully gapped: 9 Length of query: 283 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 184 Effective length of database: 11,435,796 Effective search space: 2104186464 Effective search space used: 2104186464 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)