ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf102p13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK058445:Os01g0513700 278 4e-75
2AK068877:Os01g0513700 272 2e-73
3AK058258:Os07g0454700 55 6e-08
4AK060244:Os09g0541500 31 0.96
5Os03g0102300:Os03g0102300 30 1.6
6Os01g0649400:Os01g0649400 29 4.7
7AK107036:Os02g0714300 29 4.7
8Os04g0354200:Os04g0354200 28 8.1
9AK110124: 28 8.1

>AK058445:Os01g0513700 |
          Length = 179
 Score =  278 bits (710), Expect = 4e-75
 Identities = 130/148 (87%), Positives = 139/148 (93%)
 Frame = +3

Query: 165 NAQVIYVFNRNGVCLLYREWHRPLRTLARNQDQKLMFGLLFSLRSFTAKIDPTSTEHANL 344
           NAQV+YVFNR GVCLLYREWHRPLRTL   QDQKLMFGLLFSLRSFTAKIDPT+ E  NL
Sbjct: 32  NAQVLYVFNRGGVCLLYREWHRPLRTLDPTQDQKLMFGLLFSLRSFTAKIDPTTAEKGNL 91

Query: 345 GAPLLPGQGCSFHSFKTNTYKLNYMESPSGIKLILLTHPRTGDQRDALKHIYSLYVEYVV 524
           G PLLPGQGCSF+SFKTNTYKLN++ESPSGIKLIL+THPRTGDQRD LKHIY+LYVEYVV
Sbjct: 92  GVPLLPGQGCSFYSFKTNTYKLNFLESPSGIKLILITHPRTGDQRDTLKHIYNLYVEYVV 151

Query: 525 KNPLYAPGSPIKCDLFNKHLDQYVKTLI 608
           KNPLYAPG+PIKC+LFNKHLDQYVKTLI
Sbjct: 152 KNPLYAPGTPIKCELFNKHLDQYVKTLI 179



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>AK068877:Os01g0513700 |
          Length = 180

 Score =  272 bits (695), Expect = 2e-73
 Identities = 129/149 (86%), Positives = 139/149 (93%), Gaps = 1/149 (0%)
 Frame = +3

Query: 165 NAQVIYVFNRNGVCLLYREWHRPLRTLARNQDQKLMFGLLFSLRSFTAKIDPTSTEHANL 344
           NAQV+YVFNR GVCLLYREWHRPLRTL   QDQKLMFGLLFSLRSFTAKIDPT+ E  NL
Sbjct: 32  NAQVLYVFNRGGVCLLYREWHRPLRTLDPTQDQKLMFGLLFSLRSFTAKIDPTTAEKGNL 91

Query: 345 GAPLLPGQGCSFHSFKTNTYKLNYMESPSGIKLILLTHPRTGDQRDALKHIYSLYVEYVV 524
           G PLLPGQGCSF+SFKTNTYKLN++ESPSGIKLIL+THPRTGDQRD LKHIY+LYVEYVV
Sbjct: 92  GVPLLPGQGCSFYSFKTNTYKLNFLESPSGIKLILITHPRTGDQRDTLKHIYNLYVEYVV 151

Query: 525 KNPLYAPGSPI-KCDLFNKHLDQYVKTLI 608
           KNPLYAPG+PI +C+LFNKHLDQYVKTLI
Sbjct: 152 KNPLYAPGTPINRCELFNKHLDQYVKTLI 180



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>AK058258:Os07g0454700 |
          Length = 143

 Score = 55.1 bits (131), Expect = 6e-08
 Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
 Frame = +3

Query: 177 IYVFNRNGVCLLYREWHRPLRTLARNQDQKLMFGLLFSLRSFTAKIDPTSTEHANLGAPL 356
           +++ N++G  + Y+++    RT     D   +  L  S+ + + ++ PT           
Sbjct: 9   LFIINKSGGLIYYKDYGSAGRT--DTNDSLRLASLWHSMHAISQQLSPTP---------- 56

Query: 357 LPGQGCS-FHSFKTNTYKLNYMESPSGIKLILLTHPRTGDQRDALKHIYSLYVEYVVKNP 533
               GC      + + + L+  +S +G K   +      +    LK IY LY ++V+KNP
Sbjct: 57  ----GCEGIDLLQAHNFDLHCFQSLTGTKFFAVCETGAQNIETLLKVIYELYTDFVLKNP 112

Query: 534 LYAPGSPIKCDLFNKHLDQYVK 599
            Y    PI+C+LF+ +L Q ++
Sbjct: 113 FYEMEMPIRCELFDLNLAQVIQ 134



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>AK060244:Os09g0541500 |
          Length = 187

 Score = 31.2 bits (69), Expect = 0.96
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
 Frame = +3

Query: 387 FKTNTYKLNYMESPSGIKLILLTHP---RTGDQRDALKHIYSLYVEYVVKNPLYAPGSPI 557
           + T  YK+    + + +K I++T     +  D R+  +  ++ YV+  V NP + PG  I
Sbjct: 107 YPTENYKVYGYLTNTKVKFIMVTTDLDVKDADARNFFRKFHAAYVD-AVSNPFHVPGKKI 165

Query: 558 KCDLFNKHLDQYVKT 602
               F   +   VK+
Sbjct: 166 ASRSFGARVSTIVKS 180



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>Os03g0102300:Os03g0102300 |
          Length = 1759

 Score = 30.4 bits (67), Expect = 1.6
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
 Frame = +3

Query: 408 LNYMESPSGIKL---ILLTHPRTGDQR--DALKHIYSLYVEYVVKNPLYAPGSPIKCDLF 572
           LN ++SPS  ++   ++  H   G  +  D    I SL+     + P +AP    KCD+ 
Sbjct: 176 LNLLQSPSNDQIHDIVIFLHQTDGLSKHMDTFNTIISLFK--TKETPFFAPTPFNKCDIQ 233

Query: 573 NKHLD 587
           ++HLD
Sbjct: 234 SRHLD 238



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>Os01g0649400:Os01g0649400 |
          Length = 205

 Score = 28.9 bits (63), Expect = 4.7
 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
 Frame = +3

Query: 267 LMFGL-LFSLRSFT----AKIDPTSTEHANLGAPLLPGQGCSFHSFK 392
           LM G+ +  +RSFT    AKI  T TE   LGA  L   GC +  +K
Sbjct: 96  LMSGVPIEKIRSFTPSVIAKISSTITELIGLGAKTLVVPGCGYGEYK 142



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>AK107036:Os02g0714300 |
          Length = 486

 Score = 28.9 bits (63), Expect = 4.7
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
 Frame = -1

Query: 320 GVDLGGK*AQGEEESEHKLLVLVASERAEW------PVPLAVQQAHAVAVEDVDHLGVGA 159
           G +  G+  + EEE E +  V VA ERA W      P P     A A     +D + + A
Sbjct: 25  GEEAAGRAVEVEEEEEEEEAVPVAEERAAWGGGGTPPTPEPKSDADAEGAGSLDRVELNA 84



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>Os04g0354200:Os04g0354200 |
          Length = 885

 Score = 28.1 bits (61), Expect = 8.1
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 277 DSSSPCAHLPPRSTPPQQNTPILGRHYCQVRDAH 378
           D+    A +PP    PQ  TP+LG+ +   RDA+
Sbjct: 104 DNVDSSAVIPPEYADPQILTPMLGQRFKTERDAY 137



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>AK110124: |
          Length = 831

 Score = 28.1 bits (61), Expect = 8.1
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +1

Query: 235 SARSLATRTRSLCSDSSSPCAHLPPRSTPPQQNTPILGRH--YCQVRDA 375
           S+R         CS  + P +  PP STP  +++   GR    C+VR+A
Sbjct: 84  SSRCARAPPSQRCSSPTLPSSTAPPPSTPASRHSRSSGRQTAVCRVRNA 132


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 25,122,384
Number of extensions: 573205
Number of successful extensions: 1681
Number of sequences better than 10.0: 9
Number of HSP's gapped: 1680
Number of HSP's successfully gapped: 9
Length of query: 283
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 184
Effective length of database: 11,435,796
Effective search space: 2104186464
Effective search space used: 2104186464
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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