| Clone Name | FLbaf102p13 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT830621.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA035F10, full insert sequence Length = 900 Score = 454 bits (229), Expect = e-124 Identities = 451/525 (85%) Strand = Plus / Plus Query: 88 gcgggtcgtcgctgacgtctgtcgcgccggagtccagtcccgcaccggcagcgcctcctg 147 ||||||||||||||||||| || | |||||| | | || || ||||| ||||| || | Sbjct: 122 gcgggtcgtcgctgacgtcggtggtgccggacgcgaccccggccccggcggcgccgccgg 181 Query: 148 ggactggaacgggctccaacgcccaggtgatctacgtcttcaaccgcaacggcgtgtgcc 207 | || || |||||| ||||||| |||||| ||||||||||||||||| |||||| |||| Sbjct: 182 gcaccgggacgggcgccaacgcgcaggtgctctacgtcttcaaccgcggcggcgtctgcc 241 Query: 208 tgctgtaccgcgagtggcaccggccactccgcacgctcgctcgcaaccaggaccagaagc 267 ||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||| Sbjct: 242 tgctgtaccgcgagtggcaccggccgctccgcacgctcgaccccacccaggaccagaagc 301 Query: 268 ttatgttcggactcctcttctccctgcgctcatttaccgccaagatcgaccccacctcaa 327 | |||||||| |||||||||||||| ||||| || |||||||||||||| |||||| || Sbjct: 302 tcatgttcggcctcctcttctccctccgctccttcaccgccaagatcgatcccaccacag 361 Query: 328 cagaacacgccaatcttggggcgccactactgccaggtcagggatgctcatttcatagct 387 ||||| | | |||||||||| |||||||||||| || ||||| ||||||||| | |||| Sbjct: 362 cagaaaaggggaatcttggggtgccactactgccgggccagggttgctcattttacagct 421 Query: 388 tcaagacaaacacgtataaattgaactacatggagagcccatctggtataaagcttattc 447 ||||||||||||| || |||||||||| | | |||||||| |||||||| |||||||||| Sbjct: 422 tcaagacaaacacatacaaattgaacttcctagagagcccttctggtatcaagcttattc 481 Query: 448 tccttacccatccaagaactggtgatcaacgagatgcgctgaagcatatctacagcctat 507 | |||| |||||||| |||||||||||||| || |||||||||||||||||| ||||| Sbjct: 482 taattacacatccaaggactggtgatcaacgtgacacgctgaagcatatctacaacctat 541 Query: 508 atgtggagtatgttgtaaaaaatcctctgtatgctcccggcagcccaatcaagtgtgacc 567 ||||||| |||||||||||||||||| |||| ||||| |||| ||||||||||| || | Sbjct: 542 atgtggaatatgttgtaaaaaatcctttgtacgctcctggcacaccaatcaagtgcgagc 601 Query: 568 ttttcaataaacatctcgatcagtatgtgaaaacattgatttgat 612 |||||||||| || || ||||| ||||| ||||||||||| |||| Sbjct: 602 ttttcaataagcaccttgatcaatatgtcaaaacattgatatgat 646
>dbj|AK058445.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-G05, full insert sequence Length = 850 Score = 454 bits (229), Expect = e-124 Identities = 451/525 (85%) Strand = Plus / Plus Query: 88 gcgggtcgtcgctgacgtctgtcgcgccggagtccagtcccgcaccggcagcgcctcctg 147 ||||||||||||||||||| || | |||||| | | || || ||||| ||||| || | Sbjct: 115 gcgggtcgtcgctgacgtcggtggtgccggacgcgaccccggccccggcggcgccgccgg 174 Query: 148 ggactggaacgggctccaacgcccaggtgatctacgtcttcaaccgcaacggcgtgtgcc 207 | || || |||||| ||||||| |||||| ||||||||||||||||| |||||| |||| Sbjct: 175 gcaccgggacgggcgccaacgcgcaggtgctctacgtcttcaaccgcggcggcgtctgcc 234 Query: 208 tgctgtaccgcgagtggcaccggccactccgcacgctcgctcgcaaccaggaccagaagc 267 ||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||| Sbjct: 235 tgctgtaccgcgagtggcaccggccgctccgcacgctcgaccccacccaggaccagaagc 294 Query: 268 ttatgttcggactcctcttctccctgcgctcatttaccgccaagatcgaccccacctcaa 327 | |||||||| |||||||||||||| ||||| || |||||||||||||| |||||| || Sbjct: 295 tcatgttcggcctcctcttctccctccgctccttcaccgccaagatcgatcccaccacag 354 Query: 328 cagaacacgccaatcttggggcgccactactgccaggtcagggatgctcatttcatagct 387 ||||| | | |||||||||| |||||||||||| || ||||| ||||||||| | |||| Sbjct: 355 cagaaaaggggaatcttggggtgccactactgccgggccagggttgctcattttacagct 414 Query: 388 tcaagacaaacacgtataaattgaactacatggagagcccatctggtataaagcttattc 447 ||||||||||||| || |||||||||| | | |||||||| |||||||| |||||||||| Sbjct: 415 tcaagacaaacacatacaaattgaacttcctagagagcccttctggtatcaagcttattc 474 Query: 448 tccttacccatccaagaactggtgatcaacgagatgcgctgaagcatatctacagcctat 507 | |||| |||||||| |||||||||||||| || |||||||||||||||||| ||||| Sbjct: 475 taattacacatccaaggactggtgatcaacgtgacacgctgaagcatatctacaacctat 534 Query: 508 atgtggagtatgttgtaaaaaatcctctgtatgctcccggcagcccaatcaagtgtgacc 567 ||||||| |||||||||||||||||| |||| ||||| |||| ||||||||||| || | Sbjct: 535 atgtggaatatgttgtaaaaaatcctttgtacgctcctggcacaccaatcaagtgcgagc 594 Query: 568 ttttcaataaacatctcgatcagtatgtgaaaacattgatttgat 612 |||||||||| || || ||||| ||||| ||||||||||| |||| Sbjct: 595 ttttcaataagcaccttgatcaatatgtcaaaacattgatatgat 639
>ref|NM_001049719.1| Oryza sativa (japonica cultivar-group) Os01g0513700 (Os01g0513700) mRNA, complete cds Length = 869 Score = 432 bits (218), Expect = e-118 Identities = 451/528 (85%), Gaps = 3/528 (0%) Strand = Plus / Plus Query: 88 gcgggtcgtcgctgacgtctgtcgcgccggagtccagtcccgcaccggcagcgcctcctg 147 ||||||||||||||||||| || | |||||| | | || || ||||| ||||| || | Sbjct: 77 gcgggtcgtcgctgacgtcggtggtgccggacgcgaccccggccccggcggcgccgccgg 136 Query: 148 ggactggaacgggctccaacgcccaggtgatctacgtcttcaaccgcaacggcgtgtgcc 207 | || || |||||| ||||||| |||||| ||||||||||||||||| |||||| |||| Sbjct: 137 gcaccgggacgggcgccaacgcgcaggtgctctacgtcttcaaccgcggcggcgtctgcc 196 Query: 208 tgctgtaccgcgagtggcaccggccactccgcacgctcgctcgcaaccaggaccagaagc 267 ||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||| Sbjct: 197 tgctgtaccgcgagtggcaccggccgctccgcacgctcgaccccacccaggaccagaagc 256 Query: 268 ttatgttcggactcctcttctccctgcgctcatttaccgccaagatcgaccccacctcaa 327 | |||||||| |||||||||||||| ||||| || |||||||||||||| |||||| || Sbjct: 257 tcatgttcggcctcctcttctccctccgctccttcaccgccaagatcgatcccaccacag 316 Query: 328 cagaacacgccaatcttggggcgccactactgccaggtcagggatgctcatttcatagct 387 ||||| | | |||||||||| |||||||||||| || ||||| ||||||||| | |||| Sbjct: 317 cagaaaaggggaatcttggggtgccactactgccgggccagggttgctcattttacagct 376 Query: 388 tcaagacaaacacgtataaattgaactacatggagagcccatctggtataaagcttattc 447 ||||||||||||| || |||||||||| | | |||||||| |||||||| |||||||||| Sbjct: 377 tcaagacaaacacatacaaattgaacttcctagagagcccttctggtatcaagcttattc 436 Query: 448 tccttacccatccaagaactggtgatcaacgagatgcgctgaagcatatctacagcctat 507 | |||| |||||||| |||||||||||||| || |||||||||||||||||| ||||| Sbjct: 437 taattacacatccaaggactggtgatcaacgtgacacgctgaagcatatctacaacctat 496 Query: 508 atgtggagtatgttgtaaaaaatcctctgtatgctcccggcagcccaatcaa---gtgtg 564 ||||||| |||||||||||||||||| |||| ||||| |||| |||||||| ||| | Sbjct: 497 atgtggaatatgttgtaaaaaatcctttgtacgctcctggcacaccaatcaacaggtgcg 556 Query: 565 accttttcaataaacatctcgatcagtatgtgaaaacattgatttgat 612 | ||||||||||| || || ||||| ||||| ||||||||||| |||| Sbjct: 557 agcttttcaataagcaccttgatcaatatgtcaaaacattgatatgat 604
>dbj|AK068877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001F01, full insert sequence Length = 869 Score = 432 bits (218), Expect = e-118 Identities = 451/528 (85%), Gaps = 3/528 (0%) Strand = Plus / Plus Query: 88 gcgggtcgtcgctgacgtctgtcgcgccggagtccagtcccgcaccggcagcgcctcctg 147 ||||||||||||||||||| || | |||||| | | || || ||||| ||||| || | Sbjct: 77 gcgggtcgtcgctgacgtcggtggtgccggacgcgaccccggccccggcggcgccgccgg 136 Query: 148 ggactggaacgggctccaacgcccaggtgatctacgtcttcaaccgcaacggcgtgtgcc 207 | || || |||||| ||||||| |||||| ||||||||||||||||| |||||| |||| Sbjct: 137 gcaccgggacgggcgccaacgcgcaggtgctctacgtcttcaaccgcggcggcgtctgcc 196 Query: 208 tgctgtaccgcgagtggcaccggccactccgcacgctcgctcgcaaccaggaccagaagc 267 ||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||| Sbjct: 197 tgctgtaccgcgagtggcaccggccgctccgcacgctcgaccccacccaggaccagaagc 256 Query: 268 ttatgttcggactcctcttctccctgcgctcatttaccgccaagatcgaccccacctcaa 327 | |||||||| |||||||||||||| ||||| || |||||||||||||| |||||| || Sbjct: 257 tcatgttcggcctcctcttctccctccgctccttcaccgccaagatcgatcccaccacag 316 Query: 328 cagaacacgccaatcttggggcgccactactgccaggtcagggatgctcatttcatagct 387 ||||| | | |||||||||| |||||||||||| || ||||| ||||||||| | |||| Sbjct: 317 cagaaaaggggaatcttggggtgccactactgccgggccagggttgctcattttacagct 376 Query: 388 tcaagacaaacacgtataaattgaactacatggagagcccatctggtataaagcttattc 447 ||||||||||||| || |||||||||| | | |||||||| |||||||| |||||||||| Sbjct: 377 tcaagacaaacacatacaaattgaacttcctagagagcccttctggtatcaagcttattc 436 Query: 448 tccttacccatccaagaactggtgatcaacgagatgcgctgaagcatatctacagcctat 507 | |||| |||||||| |||||||||||||| || |||||||||||||||||| ||||| Sbjct: 437 taattacacatccaaggactggtgatcaacgtgacacgctgaagcatatctacaacctat 496 Query: 508 atgtggagtatgttgtaaaaaatcctctgtatgctcccggcagcccaatcaa---gtgtg 564 ||||||| |||||||||||||||||| |||| ||||| |||| |||||||| ||| | Sbjct: 497 atgtggaatatgttgtaaaaaatcctttgtacgctcctggcacaccaatcaacaggtgcg 556 Query: 565 accttttcaataaacatctcgatcagtatgtgaaaacattgatttgat 612 | ||||||||||| || || ||||| ||||| ||||||||||| |||| Sbjct: 557 agcttttcaataagcaccttgatcaatatgtcaaaacattgatatgat 604
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 206 bits (104), Expect = 9e-50 Identities = 203/236 (86%) Strand = Plus / Minus Query: 88 gcgggtcgtcgctgacgtctgtcgcgccggagtccagtcccgcaccggcagcgcctcctg 147 ||||||||||||||||||| || | |||||| | | || || ||||| ||||| || | Sbjct: 18134309 gcgggtcgtcgctgacgtcggtggtgccggacgcgaccccggccccggcggcgccgccgg 18134250 Query: 148 ggactggaacgggctccaacgcccaggtgatctacgtcttcaaccgcaacggcgtgtgcc 207 | || || |||||| ||||||| |||||| ||||||||||||||||| |||||| |||| Sbjct: 18134249 gcaccgggacgggcgccaacgcgcaggtgctctacgtcttcaaccgcggcggcgtctgcc 18134190 Query: 208 tgctgtaccgcgagtggcaccggccactccgcacgctcgctcgcaaccaggaccagaagc 267 ||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||| Sbjct: 18134189 tgctgtaccgcgagtggcaccggccgctccgcacgctcgaccccacccaggaccagaagc 18134130 Query: 268 ttatgttcggactcctcttctccctgcgctcatttaccgccaagatcgaccccacc 323 | |||||||| |||||||||||||| ||||| || |||||||||||||| |||||| Sbjct: 18134129 tcatgttcggcctcctcttctccctccgctccttcaccgccaagatcgatcccacc 18134074 Score = 133 bits (67), Expect = 1e-27 Identities = 109/123 (88%) Strand = Plus / Minus Query: 439 agcttattctccttacccatccaagaactggtgatcaacgagatgcgctgaagcatatct 498 |||||||||| |||| |||||||| |||||||||||||| || ||||||||||||||| Sbjct: 18133048 agcttattctaattacacatccaaggactggtgatcaacgtgacacgctgaagcatatct 18132989 Query: 499 acagcctatatgtggagtatgttgtaaaaaatcctctgtatgctcccggcagcccaatca 558 ||| |||||||||||| |||||||||||||||||| |||| ||||| |||| ||||||| Sbjct: 18132988 acaacctatatgtggaatatgttgtaaaaaatcctttgtacgctcctggcacaccaatca 18132929 Query: 559 agt 561 ||| Sbjct: 18132928 agt 18132926 Score = 99.6 bits (50), Expect = 2e-17 Identities = 86/98 (87%) Strand = Plus / Minus Query: 339 aatcttggggcgccactactgccaggtcagggatgctcatttcatagcttcaagacaaac 398 |||||||||| |||||||||||| || ||||| ||||||||| | ||||||||||||||| Sbjct: 18133287 aatcttggggtgccactactgccgggccagggttgctcattttacagcttcaagacaaac 18133228 Query: 399 acgtataaattgaactacatggagagcccatctggtat 436 || || |||||||||| | | |||||||| |||||||| Sbjct: 18133227 acatacaaattgaacttcctagagagcccttctggtat 18133190 Score = 44.1 bits (22), Expect = 0.81 Identities = 40/46 (86%) Strand = Plus / Minus Query: 567 cttttcaataaacatctcgatcagtatgtgaaaacattgatttgat 612 ||||||||||| || || ||||| ||||| ||||||||||| |||| Sbjct: 18132198 cttttcaataagcaccttgatcaatatgtcaaaacattgatatgat 18132153
>dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504D03 Length = 139201 Score = 206 bits (104), Expect = 9e-50 Identities = 203/236 (86%) Strand = Plus / Minus Query: 88 gcgggtcgtcgctgacgtctgtcgcgccggagtccagtcccgcaccggcagcgcctcctg 147 ||||||||||||||||||| || | |||||| | | || || ||||| ||||| || | Sbjct: 110750 gcgggtcgtcgctgacgtcggtggtgccggacgcgaccccggccccggcggcgccgccgg 110691 Query: 148 ggactggaacgggctccaacgcccaggtgatctacgtcttcaaccgcaacggcgtgtgcc 207 | || || |||||| ||||||| |||||| ||||||||||||||||| |||||| |||| Sbjct: 110690 gcaccgggacgggcgccaacgcgcaggtgctctacgtcttcaaccgcggcggcgtctgcc 110631 Query: 208 tgctgtaccgcgagtggcaccggccactccgcacgctcgctcgcaaccaggaccagaagc 267 ||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||| Sbjct: 110630 tgctgtaccgcgagtggcaccggccgctccgcacgctcgaccccacccaggaccagaagc 110571 Query: 268 ttatgttcggactcctcttctccctgcgctcatttaccgccaagatcgaccccacc 323 | |||||||| |||||||||||||| ||||| || |||||||||||||| |||||| Sbjct: 110570 tcatgttcggcctcctcttctccctccgctccttcaccgccaagatcgatcccacc 110515 Score = 133 bits (67), Expect = 1e-27 Identities = 109/123 (88%) Strand = Plus / Minus Query: 439 agcttattctccttacccatccaagaactggtgatcaacgagatgcgctgaagcatatct 498 |||||||||| |||| |||||||| |||||||||||||| || ||||||||||||||| Sbjct: 109489 agcttattctaattacacatccaaggactggtgatcaacgtgacacgctgaagcatatct 109430 Query: 499 acagcctatatgtggagtatgttgtaaaaaatcctctgtatgctcccggcagcccaatca 558 ||| |||||||||||| |||||||||||||||||| |||| ||||| |||| ||||||| Sbjct: 109429 acaacctatatgtggaatatgttgtaaaaaatcctttgtacgctcctggcacaccaatca 109370 Query: 559 agt 561 ||| Sbjct: 109369 agt 109367 Score = 99.6 bits (50), Expect = 2e-17 Identities = 86/98 (87%) Strand = Plus / Minus Query: 339 aatcttggggcgccactactgccaggtcagggatgctcatttcatagcttcaagacaaac 398 |||||||||| |||||||||||| || ||||| ||||||||| | ||||||||||||||| Sbjct: 109728 aatcttggggtgccactactgccgggccagggttgctcattttacagcttcaagacaaac 109669 Query: 399 acgtataaattgaactacatggagagcccatctggtat 436 || || |||||||||| | | |||||||| |||||||| Sbjct: 109668 acatacaaattgaacttcctagagagcccttctggtat 109631 Score = 44.1 bits (22), Expect = 0.81 Identities = 40/46 (86%) Strand = Plus / Minus Query: 567 cttttcaataaacatctcgatcagtatgtgaaaacattgatttgat 612 ||||||||||| || || ||||| ||||| ||||||||||| |||| Sbjct: 108639 cttttcaataagcaccttgatcaatatgtcaaaacattgatatgat 108594
>gb|DQ019456.1| Lilium longiflorum clone LP60 unknown mRNA Length = 728 Score = 115 bits (58), Expect = 3e-22 Identities = 124/146 (84%) Strand = Plus / Plus Query: 178 tctacgtcttcaaccgcaacggcgtgtgcctgctgtaccgcgagtggcaccggccactcc 237 ||||||||||||||||| |||||| ||||| || ||||||||||||||||| || |||| Sbjct: 119 tctacgtcttcaaccgcggcggcgtctgcctcctctaccgcgagtggcaccgccccctcc 178 Query: 238 gcacgctcgctcgcaaccaggaccagaagcttatgttcggactcctcttctccctgcgct 297 ||| || | |||||||||||||||||| |||||||| ||||||||||| || || | Sbjct: 179 acaccctagacgccaaccaggaccagaagctcatgttcggcctcctcttctctctacgat 238 Query: 298 catttaccgccaagatcgaccccacc 323 | || ||||||||||| ||||||||| Sbjct: 239 ccttcaccgccaagatggaccccacc 264 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 489 aagcatatctacagcctatatgtggagtatgttgtaaaaaatcc 532 |||||||| |||||||| ||||||||||||||||| || ||||| Sbjct: 430 aagcatatatacagcctgtatgtggagtatgttgtcaagaatcc 473
>emb|CT984182.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 776 Score = 67.9 bits (34), Expect = 6e-08 Identities = 103/126 (81%) Strand = Plus / Plus Query: 451 ttacccatccaagaactggtgatcaacgagatgcgctgaagcatatctacagcctatatg 510 |||| ||||| || |||||||||| |||||| || |||||| |||| ||||| ||||||| Sbjct: 365 ttacgcatcccaggactggtgatctacgagaagctctgaagtatatatacagtctatatg 424 Query: 511 tggagtatgttgtaaaaaatcctctgtatgctcccggcagcccaatcaagtgtgaccttt 570 | || ||||| | ||||| ||||| |||| ||| || | || |||| ||||||||||| Sbjct: 425 ttgaatatgtggctaaaaaccctctctatgatccaggaactcctatcaggtgtgaccttt 484 Query: 571 tcaata 576 |||||| Sbjct: 485 tcaata 490
>ref|XM_426685.2| PREDICTED: Gallus gallus hypothetical LOC429129 (LOC429129), mRNA Length = 2014 Score = 44.1 bits (22), Expect = 0.81 Identities = 22/22 (100%) Strand = Plus / Plus Query: 592 atgtgaaaacattgatttgatc 613 |||||||||||||||||||||| Sbjct: 995 atgtgaaaacattgatttgatc 1016
>emb|CT980663.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 707 Score = 44.1 bits (22), Expect = 0.81 Identities = 100/126 (79%) Strand = Plus / Plus Query: 451 ttacccatccaagaactggtgatcaacgagatgcgctgaagcatatctacagcctatatg 510 |||| ||||| || |||||||||| ||| || || ||||| |||| ||||| ||||||| Sbjct: 74 ttacgcatcctaggactggtgatctacgggaagctttgaagtatatatacagtctatatg 133 Query: 511 tggagtatgttgtaaaaaatcctctgtatgctcccggcagcccaatcaagtgtgaccttt 570 | || ||||| | ||||| ||||| || | ||| || | || |||| ||||||||||| Sbjct: 134 ttgaatatgtggctaaaaaccctctctacgatccaggaactcctatcaggtgtgaccttt 193 Query: 571 tcaata 576 |||||| Sbjct: 194 tcaata 199
>gb|AC153001.7| Medicago truncatula clone mth2-95k24, complete sequence Length = 100724 Score = 44.1 bits (22), Expect = 0.81 Identities = 22/22 (100%) Strand = Plus / Plus Query: 719 ctatgttatttggtttgataat 740 |||||||||||||||||||||| Sbjct: 19437 ctatgttatttggtttgataat 19458
>gb|AC129091.19| Medicago truncatula clone mth2-15j7, complete sequence Length = 106540 Score = 44.1 bits (22), Expect = 0.81 Identities = 22/22 (100%) Strand = Plus / Minus Query: 719 ctatgttatttggtttgataat 740 |||||||||||||||||||||| Sbjct: 74449 ctatgttatttggtttgataat 74428
>gb|AC008267.6| Homo sapiens BAC clone GS1-124K5 from 7, complete sequence Length = 196954 Score = 44.1 bits (22), Expect = 0.81 Identities = 22/22 (100%) Strand = Plus / Minus Query: 588 cagtatgtgaaaacattgattt 609 |||||||||||||||||||||| Sbjct: 34677 cagtatgtgaaaacattgattt 34656
>gb|AC124961.19| Medicago truncatula clone mth2-18l7, complete sequence Length = 106560 Score = 44.1 bits (22), Expect = 0.81 Identities = 22/22 (100%) Strand = Plus / Minus Query: 719 ctatgttatttggtttgataat 740 |||||||||||||||||||||| Sbjct: 83038 ctatgttatttggtttgataat 83017
>gb|AC149135.2| Medicago truncatula chromosome 2 BAC clone mth2-31g23, complete sequence Length = 113812 Score = 44.1 bits (22), Expect = 0.81 Identities = 22/22 (100%) Strand = Plus / Plus Query: 719 ctatgttatttggtttgataat 740 |||||||||||||||||||||| Sbjct: 112924 ctatgttatttggtttgataat 112945
>emb|AL353700.14| Human DNA sequence from clone RP3-350J21 on chromosome 6 Contains part of the DNAH8 gene for dynein axonemal heavy polypeptide 8 and the 5' part of a novel gene, complete sequence Length = 56509 Score = 44.1 bits (22), Expect = 0.81 Identities = 34/37 (91%), Gaps = 2/37 (5%) Strand = Plus / Minus Query: 726 atttggtttgataatactatttgttgagaaatttgtt 762 ||||||||||||||||| ||||||||||| |||||| Sbjct: 20178 atttggtttgataatac--tttgttgagaattttgtt 20144
>gb|AC153352.19| Medicago truncatula clone mth2-103l4, complete sequence Length = 130178 Score = 44.1 bits (22), Expect = 0.81 Identities = 22/22 (100%) Strand = Plus / Minus Query: 719 ctatgttatttggtttgataat 740 |||||||||||||||||||||| Sbjct: 2613 ctatgttatttggtttgataat 2592
>gb|AC092764.3| Pan troglodytes clone RP43-37J6, complete sequence Length = 172761 Score = 44.1 bits (22), Expect = 0.81 Identities = 22/22 (100%) Strand = Plus / Plus Query: 588 cagtatgtgaaaacattgattt 609 |||||||||||||||||||||| Sbjct: 103152 cagtatgtgaaaacattgattt 103173
>emb|AL732514.10| Mouse DNA sequence from clone RP23-219G21 on chromosome 4, complete sequence Length = 220219 Score = 44.1 bits (22), Expect = 0.81 Identities = 22/22 (100%) Strand = Plus / Plus Query: 720 tatgttatttggtttgataata 741 |||||||||||||||||||||| Sbjct: 50398 tatgttatttggtttgataata 50419
>gb|CP000471.1| Magnetococcus sp. MC-1, complete genome Length = 4719581 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 ccgcaccggcagcgcctcctg 147 ||||||||||||||||||||| Sbjct: 1592857 ccgcaccggcagcgcctcctg 1592877 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 ccgcaccggcagcgcctcctg 147 ||||||||||||||||||||| Sbjct: 3355272 ccgcaccggcagcgcctcctg 3355252
>gb|AC121807.3| Mus musculus BAC clone RP23-448N11 from chromosome 16, complete sequence Length = 178155 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 375 tcatttcatagcttcaagacaaaca 399 |||||||||||||| |||||||||| Sbjct: 92158 tcatttcatagcttaaagacaaaca 92182
>ref|XM_748265.1| Aspergillus fumigatus Af293 MFS quinate transporter (Afu5g12950) partial mRNA Length = 1647 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 cgcccgcctcggcagctgcta 75 ||||||||||||||||||||| Sbjct: 498 cgcccgcctcggcagctgcta 518
>gb|AC087045.7| Homo sapiens chromosome 8, clone CTD-2342N23, complete sequence Length = 121280 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 140 gcctcctgggactggaacgggctcc 164 |||||||||||||||| |||||||| Sbjct: 72865 gcctcctgggactggagcgggctcc 72889
>gb|AC021723.11| Homo sapiens chromosome 11, clone RP11-313M3, complete sequence Length = 166447 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 atttcatagcttcaagacaaa 397 ||||||||||||||||||||| Sbjct: 139047 atttcatagcttcaagacaaa 139027
>gb|AC009866.6| Homo sapiens chromosome 11, clone RP11-61E7, complete sequence Length = 177564 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 atttcatagcttcaagacaaa 397 ||||||||||||||||||||| Sbjct: 5608 atttcatagcttcaagacaaa 5588
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 ggaacgggctccaacgcccag 173 ||||||||||||||||||||| Sbjct: 71029 ggaacgggctccaacgcccag 71049
>gb|AF289203.1|AF289203S1 Homo sapiens odorant receptor HOR3'beta1, odorant receptor HOR3'beta2, and odorant receptor HOR3'beta3 genes, complete cds Length = 36446 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 tccgcccgcctcggcagctgctatg 77 ||||||||||||||||||| ||||| Sbjct: 5913 tccgcccgcctcggcagctactatg 5889
>gb|AC104389.8| Homo sapiens chromosome 11, clone CTD-2643I7, complete sequence Length = 207343 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 53 tccgcccgcctcggcagctgctatg 77 ||||||||||||||||||| ||||| Sbjct: 545 tccgcccgcctcggcagctactatg 569
>gb|AC129505.8| Homo sapiens chromosome 11, clone RP11-1205H24, complete sequence Length = 117817 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 53 tccgcccgcctcggcagctgctatg 77 ||||||||||||||||||| ||||| Sbjct: 71802 tccgcccgcctcggcagctactatg 71826
>gb|AC150034.2| Mus musculus BAC clone RP23-428H16 from 16, complete sequence Length = 187989 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 375 tcatttcatagcttcaagacaaaca 399 |||||||||||||| |||||||||| Sbjct: 186600 tcatttcatagcttaaagacaaaca 186624 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 135,323,642 Number of extensions: 6946965 Number of successful extensions: 188708 Number of sequences better than 10.0: 30 Number of HSP's gapped: 188698 Number of HSP's successfully gapped: 38 Length of query: 851 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 829 Effective length of database: 18,508,616,841 Effective search space: 15343643361189 Effective search space used: 15343643361189 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)