ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf102n23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q8NA29:MFSD2_HUMAN Major facilitator superfamily domain-containi... 36 0.20
2Q62924:AKA11_RAT A-kinase anchor protein 11 - Rattus norvegicus ... 32 2.9
3Q0UUE2:CFT1_PHANO Protein CFT1 - Phaeosphaeria nodorum (Septoria... 31 6.5
4Q8BTI8:SRRM2_MOUSE Serine/arginine repetitive matrix protein 2 -... 31 8.5
5Q8FMD0:DEF2_COREF Peptide deformylase 2 - Corynebacterium efficiens 31 8.5

>Q8NA29:MFSD2_HUMAN Major facilitator superfamily domain-containing protein 2 - Homo|
           sapiens (Human)
          Length = 543
 Score = 36.2 bits (82), Expect = 0.20
 Identities = 23/52 (44%), Positives = 29/52 (55%)
 Frame = +3

Query: 408 RGSAAASRCFSDSVGTVNPEALVGQIVGHADQEVFKTITSSYYLLAGSSWNH 563
           R SA A R   + +GTV   A+ GQIVG AD   F+ + SS   +A  S NH
Sbjct: 192 RDSATAYRMTVEVLGTVLGTAIQGQIVGQADTPCFQDLNSS--TVASQSANH 241



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>Q62924:AKA11_RAT A-kinase anchor protein 11 - Rattus norvegicus (Rat)|
          Length = 1129

 Score = 32.3 bits (72), Expect = 2.9
 Identities = 19/66 (28%), Positives = 30/66 (45%)
 Frame = -1

Query: 515 LEHFLIGVSHYLSNQGLGVDCADRIGEASGRRRTPPYQGHRCRYVACNQTQHFSPHGQCA 336
           L+ F +  SH  +N+ L     +   E   +R+   Y  H C+Y  C++TQ    +    
Sbjct: 651 LKLFPMHTSHVKTNKELLFSSKEHHQEVDKKRQRKKYGSHPCKYQTCDRTQDPCRNELSE 710

Query: 335 RLRFSA 318
             RFSA
Sbjct: 711 LYRFSA 716



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>Q0UUE2:CFT1_PHANO Protein CFT1 - Phaeosphaeria nodorum (Septoria nodorum)|
          Length = 1375

 Score = 31.2 bits (69), Expect = 6.5
 Identities = 23/64 (35%), Positives = 25/64 (39%), Gaps = 10/64 (15%)
 Frame = -2

Query: 922  THLHMPTLSSFRISVIHKSPWH------NRA*QILILPSSEKEYPRLSSFVVLQKQ---- 773
            + LHMPT S F  S     P H            LI P SE  Y RLS      +Q    
Sbjct: 1263 SRLHMPTASEFTTSTTSSLPLHQILCTSQSGTLALITPLSESSYRRLSGLATHLQQFLDS 1322

Query: 772  PCDL 761
            PC L
Sbjct: 1323 PCGL 1326



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>Q8BTI8:SRRM2_MOUSE Serine/arginine repetitive matrix protein 2 - Mus musculus (Mouse)|
          Length = 2703

 Score = 30.8 bits (68), Expect = 8.5
 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
 Frame = -1

Query: 326  FSAIRPEEPELSTISSRTPNR-RCSSSTP*TR---PEEGRGIERDGSSQSLRVMLSSPLR 159
            FS+ +   P L T+  RTP+R R SS++P  +   P       R GSS  LR    +P R
Sbjct: 1353 FSSQKVSSPVLETVQQRTPSRERSSSASPELKDGLPRTPSRRSRSGSSPGLRDGSGTPSR 1412



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>Q8FMD0:DEF2_COREF Peptide deformylase 2 - Corynebacterium efficiens|
          Length = 193

 Score = 30.8 bits (68), Expect = 8.5
 Identities = 19/78 (24%), Positives = 34/78 (43%)
 Frame = +3

Query: 324 EAKPSALSMWTKMLGLVAGNISAAMALIRGSAAASRCFSDSVGTVNPEALVGQIVGHADQ 503
           E  P+  + W K+ GL   N       + G+   +RCF   VG ++       ++G   +
Sbjct: 106 EGFPTGRADWAKVTGL---NEDGEEWSMEGTGFLARCFQHEVGHLDGVVYTDTLIGRWKR 162

Query: 504 EVFKTITSSYYLLAGSSW 557
              KTI ++ +   G +W
Sbjct: 163 LAKKTIKANGWTEPGLTW 180


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 161,753,521
Number of extensions: 3465559
Number of successful extensions: 9619
Number of sequences better than 10.0: 5
Number of HSP's gapped: 9616
Number of HSP's successfully gapped: 5
Length of query: 318
Length of database: 100,686,439
Length adjustment: 113
Effective length of query: 205
Effective length of database: 69,691,104
Effective search space: 14286676320
Effective search space used: 14286676320
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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