ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf86g19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK066913:Os02g0131300 | 327 | 8e-90 | 2 | Os03g0302000:Os03g0302000 | 33 | 0.50 | 3 | Os10g0363700:Os10g0363700 | 31 | 1.5 | 4 | AK073544:Os01g0895300 | 31 | 1.5 | 5 | AK105980:Os02g0639800 | 30 | 3.3 | 6 | AK071904:Os02g0639800 | 30 | 3.3 | 7 | AK067733:Os03g0247100 | 30 | 3.3 | 8 | AK119736: | 30 | 4.3 | 9 | AK099711:Os10g0183900 | 30 | 4.3 | 10 | AK072957:Os10g0183900 | 30 | 4.3 | 11 | AK070579:Os10g0209700 | 29 | 5.6 | 12 | AK110457: | 29 | 7.3 | 13 | AK105441:Os01g0911700 | 29 | 7.3 | 14 | Os12g0422700:Os12g0422700 | 29 | 7.3 | 15 | Os03g0700400:Os03g0700400 | 29 | 7.3 | 16 | AK110541: | 28 | 9.5 | 17 | AK105305:Os02g0795900 | 28 | 9.5 | 18 | AK068028:Os05g0551000 | 28 | 9.5 |
|---|
>AK066913:Os02g0131300 | Length = 240 Score = 327 bits (839), Expect = 8e-90 Identities = 172/228 (75%), Positives = 190/228 (83%), Gaps = 2/228 (0%) Frame = +2 Query: 155 QLYSVQAALANGGVTQVRSFAKEA--APVSGDDLLKGIFFEVKKKFETALGVLKKEKITI 328 QLYS QAALANGG TQVR +AKEA PV+GDDLLKGIFFEVKKKFETALGVLKKEKITI Sbjct: 13 QLYSAQAALANGGATQVRLYAKEADRTPVNGDDLLKGIFFEVKKKFETALGVLKKEKITI 72 Query: 329 DPDDPTAVANYAQVMRTVREKADLLSDSQRIKYTIETFTKGIPDARTYLDTLQQLRKKNG 508 DPDDP AV+ YAQVM+TVR+KADLLSDS+RIKYTI+TFTKGIPDARTYL+TLQ++R K+G Sbjct: 73 DPDDPAAVSRYAQVMKTVRQKADLLSDSERIKYTIDTFTKGIPDARTYLNTLQEIRIKSG 132 Query: 509 LXXXXXXXXXXXXXXXXXXXXXXXXXXRNDRKNMGLLLAEFDKINKKLGFRKEDLPKIEE 688 L R+D+KNMGLLLAEF+KINKKLG RKEDLPKIEE Sbjct: 133 LIDDMGAEAMMMEALEKVEKEIKKPLLRSDKKNMGLLLAEFEKINKKLGIRKEDLPKIEE 192 Query: 689 ELEMQIAKAELTELKKEVVEAMEGQLKREEFKDEEMPDVRKLDIRNFL 832 ELE++IAK+ELTELKKE VEAME QLKREEFKDEEMPDV+KLDIRNFL Sbjct: 193 ELELEIAKSELTELKKECVEAMEVQLKREEFKDEEMPDVKKLDIRNFL 240
>Os03g0302000:Os03g0302000 | Length = 242 Score = 32.7 bits (73), Expect = 0.50 Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Frame = +3 Query: 48 LSRPRDRIGE--EEGGPSSAAPHPQPWRSPLASYPAPASYILSKLLWPMEVSLKSAH-LP 218 LSR R+G+ + A PHP P + LA Y L + +W + L AH LP Sbjct: 76 LSRKAFRLGKFVQNVNALRAHPHPPPAVALLAYGGEGVYYFLEQFVWLAKAGLLPAHLLP 135 Query: 219 RRQLLSA 239 R Q LSA Sbjct: 136 RLQRLSA 142
>Os10g0363700:Os10g0363700 | Length = 1960 Score = 31.2 bits (69), Expect = 1.5 Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 17/91 (18%) Frame = +2 Query: 590 RNDRKNMGLL------LAEFDKINKKLGFRKEDLPKIEEELEMQIAKAELT---ELKKEV 742 R D+ + LL +FD + +KL F +E + K+E+EL+ K +++ + K + Sbjct: 1069 RQDKSELELLDMKQKYQLDFDAMKEKLNFSEEHMEKLEKELQDMTHKFKISSEAQEKYSI 1128 Query: 743 VEA--------MEGQLKREEFKDEEMPDVRK 811 + A MEGQL+ ++E + + K Sbjct: 1129 INADLTSRLAEMEGQLQHITSENEALVEKLK 1159
>AK073544:Os01g0895300 | Length = 376 Score = 31.2 bits (69), Expect = 1.5 Identities = 18/47 (38%), Positives = 25/47 (53%) Frame = +1 Query: 46 RSRGREIESEKKKEALAPPPRTRSHGARRSPRIPLPPVIFCPSCFGQ 186 R RGR +++++++ PP R H AR PR LPP P GQ Sbjct: 258 RRRGRRVQAKRRRARRRHPPGDRDHRAR--PR--LPPGARVPGAAGQ 300
>AK105980:Os02g0639800 | Length = 286 Score = 30.0 bits (66), Expect = 3.3 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 9/55 (16%) Frame = +3 Query: 48 LSRPRDRIGEEEGG-----PSSAAPHPQPW----RSPLASYPAPASYILSKLLWP 185 + R DR+G+++GG S+ P PW + AS PAPA L +++P Sbjct: 144 VERQSDRLGDDDGGHRHGSTGSSPPVRSPWHANHHAAAASTPAPAPARLFDVVYP 198
>AK071904:Os02g0639800 | Length = 286 Score = 30.0 bits (66), Expect = 3.3 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 9/55 (16%) Frame = +3 Query: 48 LSRPRDRIGEEEGG-----PSSAAPHPQPW----RSPLASYPAPASYILSKLLWP 185 + R DR+G+++GG S+ P PW + AS PAPA L +++P Sbjct: 144 VERQSDRLGDDDGGHRHGSTGSSPPVRSPWHANHHAAAASTPAPAPARLFDVVYP 198
>AK067733:Os03g0247100 | Length = 648 Score = 30.0 bits (66), Expect = 3.3 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Frame = -2 Query: 354 ATAVGSSGSIVIFSFLRTPSAVSNFF-FTSKNMPFNRSSPLTGAASLANERT*VTPPLAK 178 ++ SS S+V+ P S F+ FT+++ L G + A+E TPP Sbjct: 64 SSGAASSSSVVLPPIDPAPHISSQFYTFTAESHALMLRCVLAGRPAAADEVRSATPPSVL 123 Query: 177 AAWTEYNWRERD 142 A+W W++R+ Sbjct: 124 ASWRAV-WKDRN 134
>AK119736: | Length = 1179 Score = 29.6 bits (65), Expect = 4.3 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +1 Query: 49 SRGREIESEKKKEALAPPPRTRSHGARRSPRIPLPPVI 162 S+ + S + LA PP T A P IP PPVI Sbjct: 101 SKPEKASSADRPTPLAAPPSTSGRAATPPPPIPSPPVI 138
>AK099711:Os10g0183900 | Length = 364 Score = 29.6 bits (65), Expect = 4.3 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +1 Query: 97 PPPRTRSHGARRSPRIPLPPVIF 165 PPP+ S R PR PLPPV F Sbjct: 203 PPPKVDSSVVRIEPRKPLPPVSF 225
>AK072957:Os10g0183900 | Length = 364 Score = 29.6 bits (65), Expect = 4.3 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +1 Query: 97 PPPRTRSHGARRSPRIPLPPVIF 165 PPP+ S R PR PLPPV F Sbjct: 203 PPPKVDSSVVRIEPRKPLPPVSF 225
>AK070579:Os10g0209700 | Length = 265 Score = 29.3 bits (64), Expect = 5.6 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +1 Query: 67 ESEKKKEALAPPPRTRSHGARRSPRIPLPPVIFCPSC 177 E EKK+EA APPP + ++ + L + C +C Sbjct: 103 EEEKKEEAPAPPPEEKKEEPPKTITVILKVQMHCDAC 139
>AK110457: | Length = 746 Score = 28.9 bits (63), Expect = 7.3 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +3 Query: 87 GPSSAAPHPQPWRSPLASYPAPAS 158 G S AAP PQP R P+A+ A A+ Sbjct: 81 GQSMAAPQPQPEREPVAAVAAAAA 104
>AK105441:Os01g0911700 | Length = 727 Score = 28.9 bits (63), Expect = 7.3 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = -3 Query: 170 GQNITGGSGIRGERRAPWLRVRGGGARASFFFSD 69 G+ GG G G +AP +RG AR FF+D Sbjct: 17 GKQGGGGGGGGGRGKAPAAEIRGEAARDDVFFAD 50
>Os12g0422700:Os12g0422700 | Length = 1914 Score = 28.9 bits (63), Expect = 7.3 Identities = 17/55 (30%), Positives = 24/55 (43%) Frame = +2 Query: 299 GVLKKEKITIDPDDPTAVANYAQVMRTVREKADLLSDSQRIKYTIETFTKGIPDA 463 G K +KI +DP DPT ++ D++ IK + FTK DA Sbjct: 1687 GDAKTKKIPLDPSDPTKTV-------VIQHSLHAKEDAKPIKQLLRRFTKDRKDA 1734
>Os03g0700400:Os03g0700400 | Length = 866 Score = 28.9 bits (63), Expect = 7.3 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = +2 Query: 311 KEKITIDPDDPTAVANYAQVMRTVREKADLLSDSQRIKYTIETFTKGI-PDARTYLDT 481 ++ T DPD + ++ Q+ E+ L + + Y+I+ +GI P RTY+DT Sbjct: 237 RKPTTTDPDSESRLSLVEQIYVPRDERFGHLKMADFLGYSIKAIAEGIVPAIRTYVDT 294
>AK110541: | Length = 232 Score = 28.5 bits (62), Expect = 9.5 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 7/53 (13%) Frame = +3 Query: 90 PSSAAPHPQPWRSPLASYPA-PASYIL------SKLLWPMEVSLKSAHLPRRQ 227 PSS PH +P SPL S PA P S +L +L PM + S L R++ Sbjct: 22 PSSLPPHVEPSPSPLPSPPAYPPSLLLPLRLHTHQLRRPMPLHPTSLQLARKR 74
>AK105305:Os02g0795900 | Length = 521 Score = 28.5 bits (62), Expect = 9.5 Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 1/21 (4%) Frame = +3 Query: 75 EEEGGPSSAAPHPQPW-RSPL 134 EEEGGPSS PH PW R+P+ Sbjct: 9 EEEGGPSSRVPH-LPWMRNPV 28
>AK068028:Os05g0551000 | Length = 811 Score = 28.5 bits (62), Expect = 9.5 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = -3 Query: 1037 HVASLRKKQNSQRQKPNSTVVFSVQFYYKEQEHPLGVA*STGCH 906 H +L KQ + K ST++F + + + +HPLG A + G + Sbjct: 295 HSYTLDHKQEEELFKDISTILFELSQLHADLKHPLGGADAVGAN 338 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 29,654,680 Number of extensions: 642717 Number of successful extensions: 2956 Number of sequences better than 10.0: 18 Number of HSP's gapped: 2933 Number of HSP's successfully gapped: 18 Length of query: 390 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 287 Effective length of database: 11,275,632 Effective search space: 3236106384 Effective search space used: 3236106384 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
