ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf88n03 |
|---|---|
| Clone Library Name | barley_pub |
>AK109929:Os03g0306700 | Length = 173 Score = 89.0 bits (219), Expect = 2e-18 Identities = 48/98 (48%), Positives = 63/98 (64%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMRVTTALMXXXXXXXXXXNRVLSADARY 181 +RLSA+RSR+K+QQ L A QL +N+AMR + NRVL+A AR Sbjct: 33 NRLSAQRSRIKKQQYVDGLAVEAEQLRRENDAMRAGAGAVLQRCRLVEQENRVLAAHARE 92 Query: 182 LYSLLEQQNSQLRVLGELAGVPMDVQEIPVHLTQLYGG 295 L S L+ + SQLR+LGE+AGVP+DV ++ HL QLYGG Sbjct: 93 LCSALQLRASQLRLLGEVAGVPLDVPDVADHLVQLYGG 130
>X57325:Os05g0129300 | Length = 148 Score = 48.9 bits (115), Expect = 3e-06 Identities = 32/89 (35%), Positives = 45/89 (50%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMRVTTALMXXXXXXXXXXNRVLSADARY 181 +R SARRSR ++QQR L A AA+L+ +N + N VL A Sbjct: 33 NRESARRSRARKQQRLEELIAEAARLQAENARVEAQIGAYAGELSKVDGENAVLRARHGE 92 Query: 182 LYSLLEQQNSQLRVLGELAGVPMDVQEIP 268 L L+ S L +L ++AG P+D+ EIP Sbjct: 93 LAGRLQALGSVLEIL-QVAGAPVDIPEIP 120
>AK105138:Os05g0129300 | Length = 148 Score = 48.9 bits (115), Expect = 3e-06 Identities = 32/89 (35%), Positives = 45/89 (50%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMRVTTALMXXXXXXXXXXNRVLSADARY 181 +R SARRSR ++QQR L A AA+L+ +N + N VL A Sbjct: 33 NRESARRSRARKQQRLEELIAEAARLQAENARVEAQIGAYAGELSKVDGENAVLRARHGE 92 Query: 182 LYSLLEQQNSQLRVLGELAGVPMDVQEIP 268 L L+ S L +L ++AG P+D+ EIP Sbjct: 93 LAGRLQALGSVLEIL-QVAGAPVDIPEIP 120
>AK104844:Os05g0129300 | Length = 148 Score = 48.9 bits (115), Expect = 3e-06 Identities = 32/89 (35%), Positives = 45/89 (50%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMRVTTALMXXXXXXXXXXNRVLSADARY 181 +R SARRSR ++QQR L A AA+L+ +N + N VL A Sbjct: 33 NRESARRSRARKQQRLEELIAEAARLQAENARVEAQIGAYAGELSKVDGENAVLRARHGE 92 Query: 182 LYSLLEQQNSQLRVLGELAGVPMDVQEIP 268 L L+ S L +L ++AG P+D+ EIP Sbjct: 93 LAGRLQALGSVLEIL-QVAGAPVDIPEIP 120
>AK065180:Os05g0129300 | Length = 148 Score = 48.9 bits (115), Expect = 3e-06 Identities = 32/89 (35%), Positives = 45/89 (50%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMRVTTALMXXXXXXXXXXNRVLSADARY 181 +R SARRSR ++QQR L A AA+L+ +N + N VL A Sbjct: 33 NRESARRSRARKQQRLEELIAEAARLQAENARVEAQIGAYAGELSKVDGENAVLRARHGE 92 Query: 182 LYSLLEQQNSQLRVLGELAGVPMDVQEIP 268 L L+ S L +L ++AG P+D+ EIP Sbjct: 93 LAGRLQALGSVLEIL-QVAGAPVDIPEIP 120
>AY072929:Os03g0796900 | Length = 239 Score = 35.0 bits (79), Expect = 0.039 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMRVTTALMXXXXXXXXXXNRVLSADARY 181 +R SARRSR ++ L A+ +QL ++N ++ A + NRVL AD Sbjct: 56 NRESARRSRSRKAAHLNELEAQVSQLRVENSSLLRRLADVNQKYNDAAVDNRVLKADVET 115 Query: 182 LYSLLEQ-QNSQLRVLGELAGVP 247 L + ++ ++S RV G A P Sbjct: 116 LRAKVKMAEDSVKRVTGMNALFP 138
>D78609:Os03g0796900 | Length = 425 Score = 35.0 bits (79), Expect = 0.039 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMRVTTALMXXXXXXXXXXNRVLSADARY 181 +R SARRSR ++ L A+ +QL ++N ++ A + NRVL AD Sbjct: 242 NRESARRSRSRKAAHLNELEAQVSQLRVENSSLLRRLADVNQKYNDAAVDNRVLKADVET 301 Query: 182 LYSLLEQ-QNSQLRVLGELAGVP 247 L + ++ ++S RV G A P Sbjct: 302 LRAKVKMAEDSVKRVTGMNALFP 324
>AK068589:Os03g0796900 | Length = 425 Score = 35.0 bits (79), Expect = 0.039 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMRVTTALMXXXXXXXXXXNRVLSADARY 181 +R SARRSR ++ L A+ +QL ++N ++ A + NRVL AD Sbjct: 242 NRESARRSRSRKAAHLNELEAQVSQLRVENSSLLRRLADVNQKYNDAAVDNRVLKADVET 301 Query: 182 LYSLLEQ-QNSQLRVLGELAGVP 247 L + ++ ++S RV G A P Sbjct: 302 LRAKVKMAEDSVKRVTGMNALFP 324
>AK098869:Os09g0306400 | Length = 153 Score = 34.3 bits (77), Expect = 0.066 Identities = 23/82 (28%), Positives = 36/82 (43%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMRVTTALMXXXXXXXXXXNRVLSADARY 181 +R SARRSR+++QQ LT++ QL+ N+ + + +L N VL Sbjct: 39 NRESARRSRMRKQQHLDELTSQVNQLKNQNQQLSMALSLTTQNLVAVQAQNSVLQTQELE 98 Query: 182 LYSLLEQQNSQLRVLGELAGVP 247 L S L L + + P Sbjct: 99 LQSRLCALTDILMCMNNTSATP 120
>AK072360:Os09g0306400 | Length = 153 Score = 34.3 bits (77), Expect = 0.066 Identities = 23/82 (28%), Positives = 36/82 (43%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMRVTTALMXXXXXXXXXXNRVLSADARY 181 +R SARRSR+++QQ LT++ QL+ N+ + + +L N VL Sbjct: 39 NRESARRSRMRKQQHLDELTSQVNQLKNQNQQLSMALSLTTQNLVAVQAQNSVLQTQELE 98 Query: 182 LYSLLEQQNSQLRVLGELAGVP 247 L S L L + + P Sbjct: 99 LQSRLCALTDILMCMNNTSATP 120
>AK064903:Os09g0306400 | Length = 153 Score = 34.3 bits (77), Expect = 0.066 Identities = 23/82 (28%), Positives = 36/82 (43%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMRVTTALMXXXXXXXXXXNRVLSADARY 181 +R SARRSR+++QQ LT++ QL+ N+ + + +L N VL Sbjct: 39 NRESARRSRMRKQQHLDELTSQVNQLKNQNQQLSMALSLTTQNLVAVQAQNSVLQTQELE 98 Query: 182 LYSLLEQQNSQLRVLGELAGVP 247 L S L L + + P Sbjct: 99 LQSRLCALTDILMCMNNTSATP 120
>AK070887:Os02g0132500 | Length = 163 Score = 33.5 bits (75), Expect = 0.11 Identities = 23/72 (31%), Positives = 32/72 (44%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMRVTTALMXXXXXXXXXXNRVLSADARY 181 +R SARRSR+++Q+ LTA+ A L +N + L N VL A Sbjct: 45 NRESARRSRMRKQRHLDDLTAQVAHLRRENAHVATALGLTTQGLLAVDAENAVLRTQAAE 104 Query: 182 LYSLLEQQNSQL 217 L + L N L Sbjct: 105 LAARLASLNDIL 116
>Os03g0770000:Os03g0770000 | Length = 151 Score = 32.7 bits (73), Expect = 0.19 Identities = 20/61 (32%), Positives = 29/61 (47%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMRVTTALMXXXXXXXXXXNRVLSADARY 181 +RLSARRSR ++QQR L +A+L +N + + N L A+A Sbjct: 63 NRLSARRSRARKQQRLEELRGESARLRAENRELAARLHAVARHGLAARCQNARLRAEAAA 122 Query: 182 L 184 L Sbjct: 123 L 123
>Os02g0191600:Os02g0191600 | Length = 170 Score = 32.0 bits (71), Expect = 0.33 Identities = 23/73 (31%), Positives = 39/73 (53%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMRVTTALMXXXXXXXXXXNRVLSADARY 181 +R SARRSRV++Q+R L+++ ++L N+ + V N ++S AR Sbjct: 82 NRESARRSRVRKQRRLDELSSQVSELRDTNQRLLV-------------ELNHMISKHAR- 127 Query: 182 LYSLLEQQNSQLR 220 + ++NSQLR Sbjct: 128 ----IVRENSQLR 136
>AB118012:Os07g0209800 | Length = 205 Score = 32.0 bits (71), Expect = 0.33 Identities = 15/34 (44%), Positives = 23/34 (67%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMR 103 +R SARRSR+++QQ L + A+L +N A+R Sbjct: 94 NRESARRSRLRKQQECEELARKVAELTTENSALR 127
>AK109253: | Length = 196 Score = 30.8 bits (68), Expect = 0.73 Identities = 25/83 (30%), Positives = 34/83 (40%) Frame = -1 Query: 285 SCVRWTGISCTSIGTPASSPSTRSWEFCCSRRLYR*RASAESTRFCCWTRLHCCCMRAVV 106 SC+ C + T AS TRS CS R R R ++ STR WT A Sbjct: 90 SCLSSHAPGCLTRSTAASIAPTRS-SAPCSSRSRRLRCASPSTRPIPWTARRANARCAAC 148 Query: 105 TRMASLSISSWAARAVRLPSRCC 37 +R S ++ + A+R C Sbjct: 149 SRSRSRCATARCSAAIRRSRPSC 171
>AK111466:Os01g0578800 | Length = 205 Score = 30.4 bits (67), Expect = 0.96 Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 4/90 (4%) Frame = -1 Query: 294 PPYSCVRWTGISCTSIGTPAS--SPSTRSWEFCCSRRLYR*RASAESTRFCCWTRLHCCC 121 PP+S WT +PAS +P T SW C + A ++ C R CC Sbjct: 91 PPWS---WT--------SPASCLAPPTGSWPTCSAPAPPIRTPPAGASSSCTRRRRPACC 139 Query: 120 M--RAVVTRMASLSISSWAARAVRLPSRCC 37 A+ TR + S + W A A PSR C Sbjct: 140 CAAEAMSTRCITTSATRWLAGA--WPSRSC 167
>AK112009:Os02g0128200 | Length = 347 Score = 29.3 bits (64), Expect = 2.1 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMR 103 +R SARRSR+++Q L+ RA L +N ++R Sbjct: 256 NRESARRSRLRKQAECEELSVRADNLRAENSSLR 289
>AK111901:Os02g0128200 | Length = 347 Score = 29.3 bits (64), Expect = 2.1 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMR 103 +R SARRSR+++Q L+ RA L +N ++R Sbjct: 256 NRESARRSRLRKQAECEELSVRADNLRAENSSLR 289
>AK110526:Os01g0542700 | Length = 182 Score = 29.3 bits (64), Expect = 2.1 Identities = 21/79 (26%), Positives = 35/79 (44%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMRVTTALMXXXXXXXXXXNRVLSADARY 181 +RLSA+RSR ++QQ+ L + A L N A+ + N +L A + Sbjct: 50 NRLSAQRSRARKQQQLDELAGQVAALRARNGALGLAAREAARRCAAVRAENELLRARSVE 109 Query: 182 LYSLLEQQNSQLRVLGELA 238 L + L+ + L + A Sbjct: 110 LAARLDSLTDLAQCLHDAA 128
>AK119828: | Length = 699 Score = 28.9 bits (63), Expect = 2.8 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 7/48 (14%) Frame = +3 Query: 171 TLATCTAFWSSRTP-------SSACSGSSPAFRWTCRKSPSTSRSCTA 293 T AT S+R P + A + SP W C +S +TSR+C + Sbjct: 622 TTATSATSPSARRPLRRASPAARASTSPSPPSAWPCSRSAATSRTCAS 669
>AB053472:Os07g0182000 | Length = 436 Score = 28.9 bits (63), Expect = 2.8 Identities = 19/75 (25%), Positives = 34/75 (45%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMRVTTALMXXXXXXXXXXNRVLSADARY 181 +R SARRSR ++ R L + + L ++N ++ A NRVL AD Sbjct: 246 NRESARRSRSRKAARLKDLEEQVSLLRVENSSLLRRLADANQKYSAAAIDNRVLMADIEA 305 Query: 182 LYSLLEQQNSQLRVL 226 L + + ++++ Sbjct: 306 LRAKVRMAEESVKMV 320
>Os02g0702000:Os02g0702000 | Length = 820 Score = 28.5 bits (62), Expect = 3.6 Identities = 19/56 (33%), Positives = 26/56 (46%) Frame = -1 Query: 204 CCSRRLYR*RASAESTRFCCWTRLHCCCMRAVVTRMASLSISSWAARAVRLPSRCC 37 C SR ++ + + S C LHCC M A + +SS + R R SRCC Sbjct: 729 CSSRSIHACSSISLSRSSACIDCLHCCSMAA----RSCACLSSASCR--RTSSRCC 778
>AK120207:Os03g0411000 | Length = 771 Score = 28.1 bits (61), Expect = 4.8 Identities = 10/34 (29%), Positives = 20/34 (58%) Frame = -1 Query: 513 HSSSKTKVAIAHVITLPVPHKHALHYTQYDNMLP 412 H+++ ++++ PVP + +H +QY N LP Sbjct: 507 HAANFNQLSVTAATQHPVPQMYHMHVSQYPNCLP 540
>AK072079:Os03g0411000 | Length = 771 Score = 28.1 bits (61), Expect = 4.8 Identities = 10/34 (29%), Positives = 20/34 (58%) Frame = -1 Query: 513 HSSSKTKVAIAHVITLPVPHKHALHYTQYDNMLP 412 H+++ ++++ PVP + +H +QY N LP Sbjct: 507 HAANFNQLSVTAATQHPVPQMYHMHVSQYPNCLP 540
>AK065941:Os06g0662200 | Length = 295 Score = 27.7 bits (60), Expect = 6.2 Identities = 17/61 (27%), Positives = 29/61 (47%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMRVTTALMXXXXXXXXXXNRVLSADARY 181 +R SARRSR ++Q + L ++ QL+ +N ++ NR+L +D Sbjct: 144 NRESARRSRRRKQAQLSELESQVEQLKGENSSLFKQLTESSQQFNTAVTDNRILKSDVEA 203 Query: 182 L 184 L Sbjct: 204 L 204
>AB053474:Os06g0662200 | Length = 295 Score = 27.7 bits (60), Expect = 6.2 Identities = 17/61 (27%), Positives = 29/61 (47%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMRVTTALMXXXXXXXXXXNRVLSADARY 181 +R SARRSR ++Q + L ++ QL+ +N ++ NR+L +D Sbjct: 144 NRESARRSRRRKQAQLSELESQVEQLKGENSSLFKQLTESSQQFNTAVTDNRILKSDVEA 203 Query: 182 L 184 L Sbjct: 204 L 204
>U04297:Os12g0156200 | Length = 209 Score = 27.3 bits (59), Expect = 8.0 Identities = 17/64 (26%), Positives = 29/64 (45%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMRVTTALMXXXXXXXXXXNRVLSADARY 181 +R SAR++ ++RQ L + A L NE+M+ + N+ L A++ Sbjct: 143 NRESARQTILRRQAIRDELARKVADLSTQNESMKKERETVMQEYLSLKETNKQLKEQAQH 202 Query: 182 LYSL 193 SL Sbjct: 203 HLSL 206
>U04295:Os12g0233800 | Length = 390 Score = 27.3 bits (59), Expect = 8.0 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMR 103 +R SARRSR+++Q L RA L+ +N ++R Sbjct: 305 NRESARRSRLRKQAECEELAQRAEVLKQENTSLR 338
>AK121360:Os12g0233800 | Length = 390 Score = 27.3 bits (59), Expect = 8.0 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMR 103 +R SARRSR+++Q L RA L+ +N ++R Sbjct: 305 NRESARRSRLRKQAECEELAQRAEVLKQENTSLR 338
>AK068766:Os12g0233800 | Length = 390 Score = 27.3 bits (59), Expect = 8.0 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMR 103 +R SARRSR+++Q L RA L+ +N ++R Sbjct: 305 NRESARRSRLRKQAECEELAQRAEVLKQENTSLR 338
>AK065767:Os12g0233800 | Length = 390 Score = 27.3 bits (59), Expect = 8.0 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 Query: 2 DRLSARRSRVKRQQREGSLTARAAQLEIDNEAMR 103 +R SARRSR+++Q L RA L+ +N ++R Sbjct: 305 NRESARRSRLRKQAECEELAQRAEVLKQENTSLR 338
>AK070283:Os04g0672600 | Length = 720 Score = 27.3 bits (59), Expect = 8.1 Identities = 20/51 (39%), Positives = 22/51 (43%) Frame = -1 Query: 285 SCVRWTGISCTSIGTPASSPSTRSWEFCCSRRLYR*RASAESTRFCCWTRL 133 SC WTGISC S RS SR +R A A+ R C RL Sbjct: 58 SCCSWTGISCDLGRVVELDLSNRS----LSRNSFRGVAVAQLGRLPCLRRL 104 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 14,388,583 Number of extensions: 276648 Number of successful extensions: 988 Number of sequences better than 10.0: 33 Number of HSP's gapped: 983 Number of HSP's successfully gapped: 33 Length of query: 203 Length of database: 15,399,855 Length adjustment: 96 Effective length of query: 107 Effective length of database: 11,555,919 Effective search space: 1236483333 Effective search space used: 1236483333 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
