ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf88n03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|CP000454.1| Arthrobacter sp. FB24, complete genome 44 0.57
2gb|AE011957.1| Xanthomonas axonopodis pv. citri str. 306, secti... 44 0.57
3emb|AL137779.6|CNS01DWM Human chromosome 14 DNA sequence BAC C-2... 44 0.57
4emb|AL355032.6|CNS05TC3 Human chromosome 14 DNA sequence BAC R-7... 44 0.57
5gb|AC115954.11| Mus musculus chromosome 16, clone RP24-62P21, co... 42 2.3
6emb|AL590559.3| Human DNA sequence from clone RP11-393N21 on chr... 42 2.3
7gb|AC026355.13| Homo sapiens 3 BAC RP11-114M1 (Roswell Park Canc... 42 2.3
8gb|AC154348.1| Mus musculus BAC clone RP24-531G19 from 16, compl... 42 2.3
9gb|AC187127.3| Pan troglodytes BAC clone CH251-121F11 from chrom... 40 9.0
10gb|BC125469.1| Mus musculus LIM homeobox transcription factor 1 ... 40 9.0
11ref|XM_001141606.1| PREDICTED: Pan troglodytes hypothetical prot... 40 9.0
12gb|BC119169.1| Mus musculus LIM homeobox transcription factor 1 ... 40 9.0
13gb|BC113491.1| Homo sapiens LIM homeobox transcription factor 1,... 40 9.0
14ref|XM_001097412.1| PREDICTED: Macaca mulatta LIM homeobox trans... 40 9.0
15ref|XM_001097306.1| PREDICTED: Macaca mulatta LIM homeobox trans... 40 9.0
16gb|DQ213461.1| Taeniopygia guttata clone 0058P0021B05 activin be... 40 9.0
17gb|DQ213460.1| Taeniopygia guttata clone 0058P0005H10 activin be... 40 9.0
18ref|XM_609798.2| PREDICTED: Bos taurus similar to LIM homeobox t... 40 9.0
19gb|BC069588.1| Homo sapiens LIM homeobox transcription factor 1,... 40 9.0
20gb|DQ002406.1| Zea mays copia retrotransposon ji and helitron Mo... 40 9.0
21ref|XM_537841.2| PREDICTED: Canis familiaris LMX1B protein (LMX1... 40 9.0
22gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 9.0
23gb|AC092994.4| Homo sapiens 3 BAC RP11-656A15 (Roswell Park Canc... 40 9.0
24dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
25dbj|AB221651.1| Mus musculus cDNA pooled tissues:(tissue_type=br... 40 9.0
26emb|AL161731.20| Human DNA sequence from clone RP11-489N22 on ch... 40 9.0
27gb|AC024589.5| Homo sapiens chromosome 5 clone RP11-42L13, compl... 40 9.0
28ref|NM_205206.1| Gallus gallus activin beta B (LOC396126), mRNA ... 40 9.0
29gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 9.0
30dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
31gb|AC148592.10| Gasterosteus aculeatus clone uogacrs-1d8-1, comp... 40 9.0
32gb|AY215073.1| Canis familiaris LMX1B (LMX1B) mRNA, partial cds 40 9.0
33emb|BX545915.7| Zebrafish DNA sequence from clone DKEY-41B16 in ... 40 9.0
34gb|BC112120.1| Homo sapiens LIM homeobox transcription factor 1,... 40 9.0
35gb|AC004098.1|AC004098 Homo sapiens chromosome 17, clone HCIT305... 40 9.0
36emb|BX005327.9| Zebrafish DNA sequence from clone DKEY-65B16 in ... 40 9.0
37emb|BX004790.9| Zebrafish DNA sequence from clone CH211-215J7 in... 40 9.0
38gb|AC148877.2| Chlamydomonas reinhardtii clone cr-11B1, complete... 40 9.0
39gb|BC069601.1| Homo sapiens LIM homeobox transcription factor 1,... 40 9.0
40ref|NM_002316.1| Homo sapiens LIM homeobox transcription factor ... 40 9.0
41emb|AL929212.8| Mouse DNA sequence from clone RP23-65G6 on chrom... 40 9.0
42ref|NM_010725.1| Mus musculus LIM homeobox transcription factor ... 40 9.0
43gb|AF059574.1|HSLMX1B3 Homo sapiens LIM homeodomain protein (LMX... 40 9.0
44gb|AF055478.1|AF055478 Gallus gallus inhibin/activin beta B subu... 40 9.0
45gb|U61141.1|MAU61141 Mesocricetus auratus LIM-homeodomain protei... 40 9.0
46gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 9.0

>gb|CP000454.1| Arthrobacter sp. FB24, complete genome
          Length = 4698945
 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 296     ctgcagtcgccactggcgccgc 317
               ||||||||||||||||||||||
Sbjct: 4520389 ctgcagtcgccactggcgccgc 4520410



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>gb|AE011957.1| Xanthomonas axonopodis pv. citri str. 306,  section 335 of 469 of the
            complete genome
          Length = 10393

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 212  cagctccgcgtgctcggggagc 233
            ||||||||||||||||||||||
Sbjct: 9693 cagctccgcgtgctcggggagc 9714



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>emb|AL137779.6|CNS01DWM Human chromosome 14 DNA sequence BAC C-2017C7 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 189116

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 196    ggagcagcagaactcccagctc 217
              ||||||||||||||||||||||
Sbjct: 159202 ggagcagcagaactcccagctc 159181



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>emb|AL355032.6|CNS05TC3 Human chromosome 14 DNA sequence BAC R-796G6 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 203108

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 196   ggagcagcagaactcccagctc 217
             ||||||||||||||||||||||
Sbjct: 17503 ggagcagcagaactcccagctc 17482



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>gb|AC115954.11| Mus musculus chromosome 16, clone RP24-62P21, complete sequence
          Length = 205819

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 448    gtgtttgtgtggtactggtagtgtg 472
              |||||||||||||||||| ||||||
Sbjct: 174299 gtgtttgtgtggtactggaagtgtg 174275



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>emb|AL590559.3| Human DNA sequence from clone RP11-393N21 on chromosome 1 Contains the 5'
              end of the gene for PAI-1 mRNA-binding protein (PAI-RBP1),
              a poly(A) binding protein, cytoplasmic 4 (PABPC4)
              pseudogene, a novel gene and a CpG island, complete
              sequence
          Length = 150651

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 422    ttatcatattgtgtgtaatgtaatgcgtgtttgtgtg 458
              |||||||| |||||||||||| ||| |||| ||||||
Sbjct: 133963 ttatcataatgtgtgtaatgtgatgtgtgtgtgtgtg 133927



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>gb|AC026355.13| Homo sapiens 3 BAC RP11-114M1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 157439

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 413   gggagcatattatcatattgt 433
             |||||||||||||||||||||
Sbjct: 37379 gggagcatattatcatattgt 37399



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>gb|AC154348.1| Mus musculus BAC clone RP24-531G19 from 16, complete sequence
          Length = 139363

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 448    gtgtttgtgtggtactggtagtgtg 472
              |||||||||||||||||| ||||||
Sbjct: 136717 gtgtttgtgtggtactggaagtgtg 136741



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>gb|AC187127.3| Pan troglodytes BAC clone CH251-121F11 from chromosome unknown,
             complete sequence
          Length = 189226

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   cctggtccagcagcagaacc 155
             ||||||||||||||||||||
Sbjct: 23100 cctggtccagcagcagaacc 23119



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>gb|BC125469.1| Mus musculus LIM homeobox transcription factor 1 beta, mRNA (cDNA
           clone MGC:159172 IMAGE:40129984), complete cds
          Length = 1298

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 ggagcagcagaactcccagc 215
           ||||||||||||||||||||
Sbjct: 865 ggagcagcagaactcccagc 884



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>ref|XM_001141606.1| PREDICTED: Pan troglodytes hypothetical protein LOC739919
            (LOC739919), mRNA
          Length = 1872

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 196  ggagcagcagaactcccagc 215
            ||||||||||||||||||||
Sbjct: 1518 ggagcagcagaactcccagc 1537



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>gb|BC119169.1| Mus musculus LIM homeobox transcription factor 1 beta, mRNA (cDNA
           clone MGC:155485 IMAGE:8733918), complete cds
          Length = 1297

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 ggagcagcagaactcccagc 215
           ||||||||||||||||||||
Sbjct: 865 ggagcagcagaactcccagc 884



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>gb|BC113491.1| Homo sapiens LIM homeobox transcription factor 1, beta, mRNA (cDNA
           clone MGC:142051 IMAGE:8322543), complete cds
          Length = 1267

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 ggagcagcagaactcccagc 215
           ||||||||||||||||||||
Sbjct: 836 ggagcagcagaactcccagc 855



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>ref|XM_001097412.1| PREDICTED: Macaca mulatta LIM homeobox transcription factor 1,
           beta, transcript variant 2 (LMX1B), mRNA
          Length = 1243

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 ggagcagcagaactcccagc 215
           ||||||||||||||||||||
Sbjct: 836 ggagcagcagaactcccagc 855



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>ref|XM_001097306.1| PREDICTED: Macaca mulatta LIM homeobox transcription factor 1,
           beta, transcript variant 1 (LMX1B), mRNA
          Length = 1209

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 ggagcagcagaactcccagc 215
           ||||||||||||||||||||
Sbjct: 855 ggagcagcagaactcccagc 874



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>gb|DQ213461.1| Taeniopygia guttata clone 0058P0021B05 activin beta B-like mRNA,
           complete sequence
          Length = 1315

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 caggaaatccccgtccacct 276
           ||||||||||||||||||||
Sbjct: 162 caggaaatccccgtccacct 143



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>gb|DQ213460.1| Taeniopygia guttata clone 0058P0005H10 activin beta B-like mRNA,
           complete sequence
          Length = 1314

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 caggaaatccccgtccacct 276
           ||||||||||||||||||||
Sbjct: 162 caggaaatccccgtccacct 143



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>ref|XM_609798.2| PREDICTED: Bos taurus similar to LIM homeobox transcription factor
           1 beta (LIM/homeobox protein LMX1B) (LIM-homeobox
           protein 1.2) (LMX-1.2) (LOC531306), mRNA
          Length = 948

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 ggagcagcagaactcccagc 215
           ||||||||||||||||||||
Sbjct: 594 ggagcagcagaactcccagc 613



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>gb|BC069588.1| Homo sapiens LIM homeobox transcription factor 1, beta, mRNA (cDNA
           clone IMAGE:7262466), partial cds
          Length = 1135

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 ggagcagcagaactcccagc 215
           ||||||||||||||||||||
Sbjct: 781 ggagcagcagaactcccagc 800



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>gb|DQ002406.1| Zea mays copia retrotransposon ji and helitron Mo17_14577, complete
             sequence
          Length = 92777

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 205   gaactcccagctccgcgtgctcgg 228
             |||||||||||||||| |||||||
Sbjct: 83206 gaactcccagctccgcctgctcgg 83183



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>ref|XM_537841.2| PREDICTED: Canis familiaris LMX1B protein (LMX1B), mRNA
          Length = 1464

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 196  ggagcagcagaactcccagc 215
            ||||||||||||||||||||
Sbjct: 1110 ggagcagcagaactcccagc 1129



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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 90      acgaggccatgcgcgtcacc 109
               ||||||||||||||||||||
Sbjct: 2489705 acgaggccatgcgcgtcacc 2489686



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>gb|AC092994.4| Homo sapiens 3 BAC RP11-656A15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 159445

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 115    cctcatgcagcagcaatgcagcct 138
              |||||||| |||||||||||||||
Sbjct: 123220 cctcatgctgcagcaatgcagcct 123243



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 121      gcagcagcaatgcagcctgg 140
                ||||||||||||||||||||
Sbjct: 29287869 gcagcagcaatgcagcctgg 29287850



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>dbj|AB221651.1| Mus musculus cDNA pooled tissues:(tissue_type=brain,dev_stage=8-12
           days
           neonate,strain=BALB/c),(tissue_type=testis,
           dev_stage=adult, strain=C57BL/6J), clone:V01Y040G13
          Length = 1119

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 ggagcagcagaactcccagc 215
           ||||||||||||||||||||
Sbjct: 786 ggagcagcagaactcccagc 805



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>emb|AL161731.20| Human DNA sequence from clone RP11-489N22 on chromosome 9 Contains the
             3' end of the LMX1B gene for LIM homeobox transcription
             factor 1, beta (NPS1, LMX1.2), the ZNF297B gene for zinc
             finger protein 297B (ZNF-X, FLJ22470, KIAA0414) and three
             CpG islands, complete sequence
          Length = 182452

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 196   ggagcagcagaactcccagc 215
             ||||||||||||||||||||
Sbjct: 37674 ggagcagcagaactcccagc 37693



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>gb|AC024589.5| Homo sapiens chromosome 5 clone RP11-42L13, complete sequence
          Length = 170272

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 425    tcatattgtgtgtaatgtaa 444
              ||||||||||||||||||||
Sbjct: 121065 tcatattgtgtgtaatgtaa 121046



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>ref|NM_205206.1| Gallus gallus activin beta B (LOC396126), mRNA
 emb|Z71594.1|GGACTBTAB G.gallus mRNA for activin beta B
          Length = 2274

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 caggaaatccccgtccacct 276
           ||||||||||||||||||||
Sbjct: 704 caggaaatccccgtccacct 685



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 346    gctgctccagccggaccagc 365
              ||||||||||||||||||||
Sbjct: 902364 gctgctccagccggaccagc 902345



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>dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0692C11
          Length = 169562

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   gcagcagcaatgcagcctgg 140
             ||||||||||||||||||||
Sbjct: 66732 gcagcagcaatgcagcctgg 66713



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>gb|AC148592.10| Gasterosteus aculeatus clone uogacrs-1d8-1, complete sequence
          Length = 40753

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 427   atattgtgtgtaatgtaatg 446
             ||||||||||||||||||||
Sbjct: 39997 atattgtgtgtaatgtaatg 40016



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>gb|AY215073.1| Canis familiaris LMX1B (LMX1B) mRNA, partial cds
          Length = 928

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 ggagcagcagaactcccagc 215
           ||||||||||||||||||||
Sbjct: 610 ggagcagcagaactcccagc 629



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>emb|BX545915.7| Zebrafish DNA sequence from clone DKEY-41B16 in linkage group 3, complete
              sequence
          Length = 192468

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 333    cggagattcagatgctgctc 352
              ||||||||||||||||||||
Sbjct: 187722 cggagattcagatgctgctc 187703



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>gb|BC112120.1| Homo sapiens LIM homeobox transcription factor 1, beta, mRNA (cDNA
           clone MGC:138325 IMAGE:8327588), complete cds
          Length = 1256

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 ggagcagcagaactcccagc 215
           ||||||||||||||||||||
Sbjct: 836 ggagcagcagaactcccagc 855



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>gb|AC004098.1|AC004098 Homo sapiens chromosome 17, clone HCIT305D20, complete sequence
          Length = 166978

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    cctggtccagcagcagaacc 155
              ||||||||||||||||||||
Sbjct: 147715 cctggtccagcagcagaacc 147734



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>emb|BX005327.9| Zebrafish DNA sequence from clone DKEY-65B16 in linkage group 7, complete
              sequence
          Length = 237129

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 435    tgtaatgtaatgcgtgtttgtgtg 458
              |||||||||||| |||||||||||
Sbjct: 187147 tgtaatgtaatgagtgtttgtgtg 187124



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>emb|BX004790.9| Zebrafish DNA sequence from clone CH211-215J7 in linkage group 7,
              complete sequence
          Length = 209666

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 435    tgtaatgtaatgcgtgtttgtgtg 458
              |||||||||||| |||||||||||
Sbjct: 142408 tgtaatgtaatgagtgtttgtgtg 142385



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>gb|AC148877.2| Chlamydomonas reinhardtii clone cr-11B1, complete sequence
          Length = 52591

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 431  tgtgtgtaatgtaatgcgtgtttgtgtg 458
            ||||||| ||||||||||||| ||||||
Sbjct: 9584 tgtgtgtcatgtaatgcgtgtgtgtgtg 9611



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>gb|BC069601.1| Homo sapiens LIM homeobox transcription factor 1, beta, mRNA (cDNA
           clone MGC:97142 IMAGE:7262383), complete cds
          Length = 1119

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 ggagcagcagaactcccagc 215
           ||||||||||||||||||||
Sbjct: 786 ggagcagcagaactcccagc 805



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>ref|NM_002316.1| Homo sapiens LIM homeobox transcription factor 1, beta (LMX1B),
           mRNA
 gb|AF057135.1|AF057135 Homo sapiens LIM homeodomain protein LMX1B mRNA, complete cds
          Length = 1119

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 ggagcagcagaactcccagc 215
           ||||||||||||||||||||
Sbjct: 786 ggagcagcagaactcccagc 805



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>emb|AL929212.8| Mouse DNA sequence from clone RP23-65G6 on chromosome 2, complete
              sequence
          Length = 255261

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 196    ggagcagcagaactcccagc 215
              ||||||||||||||||||||
Sbjct: 122769 ggagcagcagaactcccagc 122750



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>ref|NM_010725.1| Mus musculus LIM homeobox transcription factor 1 beta (Lmx1b), mRNA
 gb|AF078166.1|AF078166 Mus musculus LIM homeodomain protein (Lmx1b) mRNA, complete cds
          Length = 1119

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 ggagcagcagaactcccagc 215
           ||||||||||||||||||||
Sbjct: 786 ggagcagcagaactcccagc 805



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>gb|AF059574.1|HSLMX1B3 Homo sapiens LIM homeodomain protein (LMX1B) gene, exons 4, 5, and
           6
          Length = 1081

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 ggagcagcagaactcccagc 215
           ||||||||||||||||||||
Sbjct: 892 ggagcagcagaactcccagc 911



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>gb|AF055478.1|AF055478 Gallus gallus inhibin/activin beta B subunit precursor, mRNA,
           complete cds
          Length = 1995

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 caggaaatccccgtccacct 276
           ||||||||||||||||||||
Sbjct: 445 caggaaatccccgtccacct 426



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>gb|U61141.1|MAU61141 Mesocricetus auratus LIM-homeodomain protein mRNA, partial cds
          Length = 1421

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 ggagcagcagaactcccagc 215
           ||||||||||||||||||||
Sbjct: 756 ggagcagcagaactcccagc 775



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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 175     tcgctacctgtacagccttc 194
               ||||||||||||||||||||
Sbjct: 5489085 tcgctacctgtacagccttc 5489104


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 92,952,681
Number of extensions: 4978945
Number of successful extensions: 97161
Number of sequences better than 10.0: 46
Number of HSP's gapped: 97161
Number of HSP's successfully gapped: 46
Length of query: 609
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 587
Effective length of database: 18,508,616,841
Effective search space: 10864558085667
Effective search space used: 10864558085667
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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