ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf86g07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q2KHV9:K2013_BOVIN Uncharacterized protein KIAA2013 homolog prec... 35 0.58
2Q8WXI7:MUC16_HUMAN Mucin-16 - Homo sapiens (Human) 33 1.3
3Q9Z0Y8:CAC1I_RAT Voltage-dependent T-type calcium channel subuni... 32 4.9
4P39132:YHBE_BACSU Uncharacterized protein yhbE - Bacillus subtilis 31 8.3
5Q8IYS2:K2013_HUMAN Uncharacterized protein KIAA2013 precursor - ... 31 8.3

>Q2KHV9:K2013_BOVIN Uncharacterized protein KIAA2013 homolog precursor - Bos taurus|
           (Bovine)
          Length = 634
 Score = 34.7 bits (78), Expect = 0.58
 Identities = 27/79 (34%), Positives = 32/79 (40%)
 Frame = -2

Query: 516 STPGSSRVHPSPAEEPPLCTGVGRKRSSLKPKAVATTGTPEVHGNTELGDFLNGQTEFVS 337
           S PG +   P PA    L TG GR    L+   +A  G P V+        LN  TE V+
Sbjct: 160 SGPGPAAAGPGPASASGLLTGSGRDCVLLQEDFLAHRGRPHVYLQRIQ---LNNPTERVA 216

Query: 336 GCNTSSPEQ*PPPAHAKST 280
              T  P   P P    ST
Sbjct: 217 ALQTVGPTAGPAPRAFTST 235



to top

>Q8WXI7:MUC16_HUMAN Mucin-16 - Homo sapiens (Human)|
          Length = 22152

 Score = 33.5 bits (75), Expect = 1.3
 Identities = 21/57 (36%), Positives = 29/57 (50%)
 Frame = -2

Query: 465   LCTGVGRKRSSLKPKAVATTGTPEVHGNTELGDFLNGQTEFVSGCNTSSPEQ*PPPA 295
             L +G  +   SL   +V  T TP   G+T L    + +T+F S   TSSP+   PPA
Sbjct: 10167 LTSGFRKTNMSLDTSSVTPTNTPSSPGSTHL--LQSSKTDFTSSAKTSSPDW--PPA 10219



to top

>Q9Z0Y8:CAC1I_RAT Voltage-dependent T-type calcium channel subunit alpha-1I - Rattus|
            norvegicus (Rat)
          Length = 2201

 Score = 31.6 bits (70), Expect = 4.9
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 357  GQTEFVSGCNTSSPEQ*PPPAHAKSTATRRK 265
            GQ + VSG  +S+P   PPP  +   A++RK
Sbjct: 2170 GQAQLVSGLGSSAPGPQPPPGESTDAASKRK 2200



to top

>P39132:YHBE_BACSU Uncharacterized protein yhbE - Bacillus subtilis|
          Length = 237

 Score = 30.8 bits (68), Expect = 8.3
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -2

Query: 456 GVGRKRSSLKPKAVATTGTPEVHGNTELGDFLNGQTEFVSG 334
           G G+   S+K KAV  +G+ ++HG+ E        T F+ G
Sbjct: 44  GNGKADGSVKAKAVTISGSGKIHGDVEAESIRMNGTGFIQG 84



to top

>Q8IYS2:K2013_HUMAN Uncharacterized protein KIAA2013 precursor - Homo sapiens (Human)|
          Length = 634

 Score = 30.8 bits (68), Expect = 8.3
 Identities = 25/77 (32%), Positives = 29/77 (37%)
 Frame = -2

Query: 510 PGSSRVHPSPAEEPPLCTGVGRKRSSLKPKAVATTGTPEVHGNTELGDFLNGQTEFVSGC 331
           PG     P PA    L  G GR    L+   +A  G P V+        LN  TE V+  
Sbjct: 162 PGPVAAGPGPASVSGLAAGSGRDCVLLQEDFLAHRGRPHVYLQRIQ---LNNPTERVAAL 218

Query: 330 NTSSPEQ*PPPAHAKST 280
            T  P   P P    ST
Sbjct: 219 QTVGPTAGPAPKAFTST 235


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 157,083,111
Number of extensions: 3372338
Number of successful extensions: 10472
Number of sequences better than 10.0: 5
Number of HSP's gapped: 10453
Number of HSP's successfully gapped: 5
Length of query: 314
Length of database: 100,686,439
Length adjustment: 113
Effective length of query: 201
Effective length of database: 69,691,104
Effective search space: 14007911904
Effective search space used: 14007911904
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top