ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf86g07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC092319.2| Homo sapiens chromosome 5 clone RP11-103L11, comp... 44 0.90
2ref|XR_026897.1| PREDICTED: Gallus gallus similar to MLL5 (LOC41... 42 3.6
3emb|CR855193.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 3.6
4gb|AC160058.2| Pan troglodytes BAC clone CH251-439J22 from chrom... 42 3.6
5gb|DQ075691.1| Helianthus annuus duplicated FAD2-1 gene locus, c... 42 3.6
6gb|AC149332.2| Phakopsora pachyrhizi clone JGIAFNA-25D10, comple... 42 3.6
7gb|AF107257.1| Homo sapiens chromosome 21q22.1 PAC L12209, compl... 42 3.6
8gb|BC081207.1| Xenopus laevis hypothetical protein LOC446942, mR... 42 3.6
9gb|AC118414.9| Rattus norvegicus 3 BAC CH230-223K21 (Children's ... 42 3.6
10gb|AC073363.10| Homo sapiens 3 BAC RP11-293N1 (Roswell Park Canc... 42 3.6
11gb|DQ143939.1| Helianthus annuus cultivar RHA801 oleoyl-PC desat... 42 3.6
12gb|DQ143938.1| Helianthus annuus cultivar RHA345 oleoyl-PC desat... 42 3.6
13gb|DQ143937.1| Helianthus annuus cultivar RHA274 oleoyl-PC desat... 42 3.6
14gb|DQ143936.1| Helianthus annuus cultivar HA349 oleoyl-PC desatu... 42 3.6
15gb|DQ143935.1| Helianthus annuus cultivar HA341 oleoyl-PC desatu... 42 3.6
16gb|DQ143934.1| Helianthus annuus cultivar HA89 oleoyl-PC desatur... 42 3.6
17gb|DQ143933.1| Helianthus annuus cultivar PHD oleoyl-PC desatura... 42 3.6
18gb|DQ143932.1| Helianthus annuus cultivar PHC oleoyl-PC desatura... 42 3.6
19dbj|AK023775.1| Homo sapiens cDNA FLJ13713 fis, clone PLACE20003... 42 3.6
20gb|AC104010.21| Homo sapiens chromosome 11, clone RP11-244C20, c... 42 3.6
21gb|AC034236.5| Homo sapiens chromosome 5 clone CTD-2287O16, comp... 42 3.6
22gb|AC076972.16| Homo sapiens 12 BAC RP11-624G19 (Roswell Park Ca... 42 3.6
23gb|AC092815.2| Homo sapiens chromosome 1 clone RP5-1029K14, comp... 42 3.6
24dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.6
25emb|Z82212.3|HS481A17 Human DNA sequence from clone RP3-481A17 o... 42 3.6
26gb|AY817417.1| Helianthus annuus genotype Pervenets delta-12 ole... 42 3.6
27gb|AY817416.1| Helianthus annuus genotype PHC delta-12 oleate de... 42 3.6
28emb|AL139331.19| Human DNA sequence from clone RP11-328M4 on chr... 42 3.6
29emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4,... 42 3.6
30gb|AC113009.8| Homo sapiens chromosome 8, clone RP11-7F12, compl... 42 3.6
31gb|AF263825.1|AF263825 Leishmania donovani 3'A2rel-related prote... 42 3.6
32dbj|BS000176.1| Pan troglodytes chromosome 22 clone:RP43-006O21,... 42 3.6
33gb|AC138200.10| Mus musculus chromosome 3, clone RP23-438J19, co... 42 3.6
34dbj|AP001706.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 3.6
35dbj|AP000236.2| Homo sapiens genomic DNA, chromosome 21q, clone:... 42 3.6
36emb|AL772231.8| Mouse DNA sequence from clone RP23-398O7 on chro... 42 3.6
37dbj|AP000844.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 3.6
38dbj|AP000195.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 42 3.6
39dbj|AP000091.1| Homo sapiens genomic DNA of 21q22.1, GART and AM... 42 3.6 
>gb|AC092319.2| Homo sapiens chromosome 5 clone RP11-103L11, complete sequence
          Length = 132319
 Score = 44.1 bits (22), Expect = 0.90
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 618   cctctgctgggggaggggtggc 639
             ||||||||||||||||||||||
Sbjct: 56789 cctctgctgggggaggggtggc 56768
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>ref|XR_026897.1| PREDICTED: Gallus gallus similar to MLL5 (LOC417712), mRNA
          Length = 6716

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 59   gcgtctgctgctcctcctccg 79
            |||||||||||||||||||||
Sbjct: 5247 gcgtctgctgctcctcctccg 5267
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>emb|CR855193.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0130B08,
             complete sequence
          Length = 93476

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 63    ctgctgctcctcctccggcga 83
             |||||||||||||||||||||
Sbjct: 38189 ctgctgctcctcctccggcga 38209
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>gb|AC160058.2| Pan troglodytes BAC clone CH251-439J22 from chromosome 6, complete
             sequence
          Length = 177658

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 618   cctctgctgggggaggggtgg 638
             |||||||||||||||||||||
Sbjct: 90400 cctctgctgggggaggggtgg 90420
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>gb|DQ075691.1| Helianthus annuus duplicated FAD2-1 gene locus, complete sequence
          Length = 8286

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 69   ctcctcctccggcgatcgccttctcctcc 97
            ||||||||||||||| | |||||||||||
Sbjct: 5252 ctcctcctccggcgacctccttctcctcc 5224
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>gb|AC149332.2| Phakopsora pachyrhizi clone JGIAFNA-25D10, complete sequence
          Length = 36002

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 898   gaatttatttcttaaataaat 918
             |||||||||||||||||||||
Sbjct: 28106 gaatttatttcttaaataaat 28126
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>gb|AF107257.1| Homo sapiens chromosome 21q22.1 PAC L12209, complete sequence
          Length = 139851

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 901   tttatttcttaaataaatgccaaac 925
             |||||||||| ||||||||||||||
Sbjct: 70777 tttatttcttcaataaatgccaaac 70801
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>gb|BC081207.1| Xenopus laevis hypothetical protein LOC446942, mRNA (cDNA clone
           IMAGE:6949029), partial cds
          Length = 1471

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 634 ggtggctgtggctgctgccgg 654
           |||||||||||||||||||||
Sbjct: 170 ggtggctgtggctgctgccgg 150
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>gb|AC118414.9| Rattus norvegicus 3 BAC CH230-223K21 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 217330

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 628   gggaggggtggctgtggctgc 648
             |||||||||||||||||||||
Sbjct: 63157 gggaggggtggctgtggctgc 63177
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>gb|AC073363.10| Homo sapiens 3 BAC RP11-293N1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 184092

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 892   aatctggaatttatttcttaa 912
             |||||||||||||||||||||
Sbjct: 67605 aatctggaatttatttcttaa 67625
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>gb|DQ143939.1| Helianthus annuus cultivar RHA801 oleoyl-PC desaturase (FAD2-1) gene,
            partial cds
          Length = 2889

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 69   ctcctcctccggcgatcgccttctcctcc 97
            ||||||||||||||| | |||||||||||
Sbjct: 2365 ctcctcctccggcgacctccttctcctcc 2337
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>gb|DQ143938.1| Helianthus annuus cultivar RHA345 oleoyl-PC desaturase (FAD2-1) gene,
            partial cds
          Length = 2889

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 69   ctcctcctccggcgatcgccttctcctcc 97
            ||||||||||||||| | |||||||||||
Sbjct: 2365 ctcctcctccggcgacctccttctcctcc 2337
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>gb|DQ143937.1| Helianthus annuus cultivar RHA274 oleoyl-PC desaturase (FAD2-1) gene,
            partial cds
          Length = 2889

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 69   ctcctcctccggcgatcgccttctcctcc 97
            ||||||||||||||| | |||||||||||
Sbjct: 2365 ctcctcctccggcgacctccttctcctcc 2337
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>gb|DQ143936.1| Helianthus annuus cultivar HA349 oleoyl-PC desaturase (FAD2-1) gene,
            partial cds
          Length = 2889

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 69   ctcctcctccggcgatcgccttctcctcc 97
            ||||||||||||||| | |||||||||||
Sbjct: 2365 ctcctcctccggcgacctccttctcctcc 2337
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>gb|DQ143935.1| Helianthus annuus cultivar HA341 oleoyl-PC desaturase (FAD2-1) gene,
            partial cds
          Length = 2889

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 69   ctcctcctccggcgatcgccttctcctcc 97
            ||||||||||||||| | |||||||||||
Sbjct: 2365 ctcctcctccggcgacctccttctcctcc 2337
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>gb|DQ143934.1| Helianthus annuus cultivar HA89 oleoyl-PC desaturase (FAD2-1) gene,
            partial cds
          Length = 2889

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 69   ctcctcctccggcgatcgccttctcctcc 97
            ||||||||||||||| | |||||||||||
Sbjct: 2365 ctcctcctccggcgacctccttctcctcc 2337
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>gb|DQ143933.1| Helianthus annuus cultivar PHD oleoyl-PC desaturase (FAD2-1) gene,
            partial cds
          Length = 2889

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 69   ctcctcctccggcgatcgccttctcctcc 97
            ||||||||||||||| | |||||||||||
Sbjct: 2365 ctcctcctccggcgacctccttctcctcc 2337
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>gb|DQ143932.1| Helianthus annuus cultivar PHC oleoyl-PC desaturase (FAD2-1) gene,
            partial cds
          Length = 2889

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 69   ctcctcctccggcgatcgccttctcctcc 97
            ||||||||||||||| | |||||||||||
Sbjct: 2365 ctcctcctccggcgacctccttctcctcc 2337
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>dbj|AK023775.1| Homo sapiens cDNA FLJ13713 fis, clone PLACE2000398, moderately
            similar to LAR PROTEIN PRECURSOR (LEUKOCYTE ANTIGEN
            RELATED) (EC 3.1.3.48)
          Length = 3778

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 627  ggggaggggtggctgtggctg 647
            |||||||||||||||||||||
Sbjct: 1886 ggggaggggtggctgtggctg 1866
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>gb|AC104010.21| Homo sapiens chromosome 11, clone RP11-244C20, complete sequence
          Length = 63480

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 628   gggaggggtggctgtggctgc 648
             |||||||||||||||||||||
Sbjct: 32697 gggaggggtggctgtggctgc 32717
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>gb|AC034236.5| Homo sapiens chromosome 5 clone CTD-2287O16, complete sequence
          Length = 162384

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 624   ctgggggaggggtggctgtgg 644
             |||||||||||||||||||||
Sbjct: 99339 ctgggggaggggtggctgtgg 99319
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>gb|AC076972.16| Homo sapiens 12 BAC RP11-624G19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 161540

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 893   atctggaatttatttcttaaataaa 917
             |||||||||| ||||||||||||||
Sbjct: 12579 atctggaattgatttcttaaataaa 12603
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>gb|AC092815.2| Homo sapiens chromosome 1 clone RP5-1029K14, complete sequence
          Length = 126651

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 627   ggggaggggtggctgtggctg 647
             |||||||||||||||||||||
Sbjct: 96693 ggggaggggtggctgtggctg 96713
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 63       ctgctgctcctcctccggcga 83
                |||||||||||||||||||||
Sbjct: 24528556 ctgctgctcctcctccggcga 24528576
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>emb|Z82212.3|HS481A17 Human DNA sequence from clone RP3-481A17 on chromosome X Contains an
             ADP-ribosylation factor-like 5 (ARL5) pseudogene, complete
             sequence
          Length = 107427

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 624   ctgggggaggggtggctgtgg 644
             |||||||||||||||||||||
Sbjct: 60322 ctgggggaggggtggctgtgg 60302
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>gb|AY817417.1| Helianthus annuus genotype Pervenets delta-12 oleate desaturase
            (FAD2-1) genes, partial cds
          Length = 3262

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 69   ctcctcctccggcgatcgccttctcctcc 97
            ||||||||||||||| | |||||||||||
Sbjct: 2365 ctcctcctccggcgacctccttctcctcc 2337
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>gb|AY817416.1| Helianthus annuus genotype PHC delta-12 oleate desaturase (FAD2-1)
            genes, partial cds
          Length = 3262

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 69   ctcctcctccggcgatcgccttctcctcc 97
            ||||||||||||||| | |||||||||||
Sbjct: 2365 ctcctcctccggcgacctccttctcctcc 2337
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>emb|AL139331.19| Human DNA sequence from clone RP11-328M4 on chromosome 6 Contains a novel
              gene,  the FOXP4 gene for forkhead box P4 and five CpG
              islands, complete sequence
          Length = 180547

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 618    cctctgctgggggaggggtgg 638
              |||||||||||||||||||||
Sbjct: 150421 cctctgctgggggaggggtgg 150401
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>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16,
             complete sequence
          Length = 146313

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 63    ctgctgctcctcctccggcga 83
             |||||||||||||||||||||
Sbjct: 88187 ctgctgctcctcctccggcga 88207
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>gb|AC113009.8| Homo sapiens chromosome 8, clone RP11-7F12, complete sequence
          Length = 159520

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     gagctgggcctgagctgcagg 21
             |||||||||||||||||||||
Sbjct: 26059 gagctgggcctgagctgcagg 26039
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>gb|AF263825.1|AF263825 Leishmania donovani 3'A2rel-related protein gene, complete cds
          Length = 6086

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 633  gggtggctgtggctgctgccg 653
            |||||||||||||||||||||
Sbjct: 1620 gggtggctgtggctgctgccg 1640
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>dbj|BS000176.1| Pan troglodytes chromosome 22 clone:RP43-006O21, map 22, complete
             sequences
          Length = 146754

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 901   tttatttcttaaataaatgccaaac 925
             |||||||||| ||||||||||||||
Sbjct: 53293 tttatttcttcaataaatgccaaac 53317
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>gb|AC138200.10| Mus musculus chromosome 3, clone RP23-438J19, complete sequence
          Length = 183803

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 900    atttatttcttaaataaatgc 920
              |||||||||||||||||||||
Sbjct: 135809 atttatttcttaaataaatgc 135789
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>dbj|AP001706.1| Homo sapiens genomic DNA, chromosome 21q, section 50/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 901    tttatttcttaaataaatgccaaac 925
              |||||||||| ||||||||||||||
Sbjct: 260330 tttatttcttcaataaatgccaaac 260354
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>dbj|AP000236.2| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-355D16, complete
             sequence
          Length = 159121

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 901   tttatttcttaaataaatgccaaac 925
             |||||||||| ||||||||||||||
Sbjct: 80311 tttatttcttcaataaatgccaaac 80335
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>emb|AL772231.8| Mouse DNA sequence from clone RP23-398O7 on chromosome 4, complete
              sequence
          Length = 153653

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 898    gaatttatttcttaaataaat 918
              |||||||||||||||||||||
Sbjct: 137525 gaatttatttcttaaataaat 137505
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>dbj|AP000844.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-697E14, complete
             sequences
          Length = 199079

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1     gagctgggcctgagctgcagg 21
             |||||||||||||||||||||
Sbjct: 78325 gagctgggcctgagctgcagg 78345
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>dbj|AP000195.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             B355D16-T1073, segment 1/8, complete sequence
          Length = 100000

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 901   tttatttcttaaataaatgccaaac 925
             |||||||||| ||||||||||||||
Sbjct: 78811 tttatttcttcaataaatgccaaac 78787
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>dbj|AP000091.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             B335D16-P10G11 region, segment 1/7
          Length = 100000

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 901   tttatttcttaaataaatgccaaac 925
             |||||||||| ||||||||||||||
Sbjct: 78811 tttatttcttcaataaatgccaaac 78787


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 162,770,368
Number of extensions: 9129643
Number of successful extensions: 202136
Number of sequences better than 10.0: 39
Number of HSP's gapped: 202136
Number of HSP's successfully gapped: 39
Length of query: 943
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 920
Effective length of database: 18,503,978,556
Effective search space: 17023660271520
Effective search space used: 17023660271520
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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