ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf86d19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK120228:Os03g0766800 44 8e-05
2AK120574:Os10g0565000 27 9.7

>AK120228:Os03g0766800 |
          Length = 78
 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 33/79 (41%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
 Frame = +3

Query: 129 MAGVVGVW---FAKLGRXXXXXXXXXVVGQRNQGDGLLEAEAAKTVQIQEXXXXXXXXXX 299
           MAG+VGVW   FAK+GR         V GQR Q +G           +QE          
Sbjct: 1   MAGLVGVWLGEFAKMGRGAAPAADAGV-GQRAQSEGESCKSKVGDGVVQEITTRTRDSSI 59

Query: 300 XXED---TVCMLMDRFAPA 347
              D   TVCMLMDRFAPA
Sbjct: 60  LLSDSEATVCMLMDRFAPA 78



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>AK120574:Os10g0565000 |
          Length = 467

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 14/54 (25%), Positives = 25/54 (46%)
 Frame = -3

Query: 475 GMSYYHSISDEKRAYVQEEPAESQHKV*APMRRNEHRFTGVYQAGAKRSMSMHT 314
           G+ +YH  + +   Y  E  A+  H        N HR+ G +  G ++ + M+T
Sbjct: 317 GLGHYHFRNGD--TYAGEYFADRMHGFGVYSFANGHRYEGAWHEGRRQGLGMYT 368


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 15,982,562
Number of extensions: 306470
Number of successful extensions: 732
Number of sequences better than 10.0: 2
Number of HSP's gapped: 731
Number of HSP's successfully gapped: 2
Length of query: 226
Length of database: 15,399,855
Length adjustment: 97
Effective length of query: 129
Effective length of database: 11,515,878
Effective search space: 1485548262
Effective search space used: 1485548262
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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