| Clone Name | FLbaf86d19 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os03g55776:12003.t005745:unspliced-genomic expressed protein| Length = 849 Score = 44.6 bits (91), Expect = 7e-04 Identities = 18/22 (81%), Positives = 19/22 (86%) Frame = -2 / -2 Query: 350 SGRGEAVHEHAHRVLGVGEDAA 285 SGRGEAVHEHAH LGVGE+ A Sbjct: 446 SGRGEAVHEHAHGGLGVGEEDA 381 Score = 38.2 bits (77), Expect(2) = 0.005 Identities = 13/16 (81%), Positives = 13/16 (81%) Frame = +1 / +1 Query: 304 PRTRCACSWTASPRPD 351 PR CACSWTASP PD Sbjct: 400 PRPPCACSWTASPLPD 447 Score = 23.5 bits (45), Expect(2) = 0.005 Identities = 7/15 (46%), Positives = 11/15 (73%) Frame = +3 / +3 Query: 126 AMAGVVGVWFAKLGR 170 +MAG+VGVW + + Sbjct: 207 SMAGLVGVWLGEFAK 251 Score = 40.5 bits (82), Expect = 0.012 Identities = 17/19 (89%), Positives = 18/19 (94%) Frame = -3 / -3 Query: 349 QAGAKRSMSMHTVSSELER 293 QAGAKRSMSMHTV+SE ER Sbjct: 445 QAGAKRSMSMHTVASESER 389 Score = 34.1 bits (68), Expect = 1.0 Identities = 14/15 (93%), Positives = 14/15 (93%) Frame = +3 / +3 Query: 306 EDTVCMLMDRFAPA* 350 E TVCMLMDRFAPA* Sbjct: 402 EATVCMLMDRFAPA* 446
>LOC_Os05g32544:12005.t02850:unspliced-genomic glycosyltransferase, putative, expressed| Length = 9155 Score = 35.4 bits (71), Expect(2) = 0.083 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = +2 / +1 Query: 626 CICFEWIVWLSRKKK 670 C+C EW+VWL KKK Sbjct: 2233 CVCGEWVVWLGEKKK 2277 Score = 25.4 bits (49), Expect(2) = 0.083 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +3 / +2 Query: 363 NRCSFRRMGAYTLCCDSAGSSCT 431 +RCS RR G+ C S+ S+ T Sbjct: 1331 SRCSSRRSGSPARWCSSSSSTTT 1399
>LOC_Os05g34830:12005.t03076:unspliced-genomic NAC domain-containing protein 48, putative, expressed| Length = 2336 Score = 27.2 bits (53), Expect(3) = 0.099 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -2 / +2 Query: 206 ADDLGLCRRRRLPAQLGEPNAD 141 ADD+G+ RRRR A EP D Sbjct: 1655 ADDVGVVRRRRRAAGGAEPAQD 1720 Score = 24.9 bits (48), Expect(3) = 0.099 Identities = 9/17 (52%), Positives = 10/17 (58%) Frame = -3 / +3 Query: 268 SWICTVFAASASSRPSP 218 SW CT A A + PSP Sbjct: 180 SW*CTTSAGGAPASPSP 230 Score = 24.9 bits (48), Expect(3) = 0.099 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -1 / +2 Query: 156 RTKRRQPRPSLGPHTLG 106 R +RR+P P PH LG Sbjct: 1817 RRRRRRPAPPGHPHVLG 1867
>LOC_Os03g59350:12003.t05182:unspliced-genomic cytokinin-O-glucosyltransferase 3, putative, expressed| Length = 1652 Score = 34.1 bits (68), Expect = 1.0 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +1 / -1 Query: 7 PLIQAVTEREEANRARQPSFPSSVCVADRRAREAKSVWTERWPGL 141 P + +T R A PS S VCV ++ A+ K +T W GL Sbjct: 977 PESERITHRNGWFEASSPSASSRVCVTEKWAQLPKQTYTTDWLGL 843
>LOC_Os06g06280:12006.t00514:unspliced-genomic beta-1,3-galactosyltransferase 6, putative, expressed| Length = 5022 Score = 25.8 bits (50), Expect(2) = 1.4 Identities = 9/23 (39%), Positives = 15/23 (65%) Frame = +2 / -2 Query: 545 ILFCNSCRGFS*LY*YETKE*YV 613 ++ CN+C G *LY*+ + Y+ Sbjct: 4385 LVLCNTCAG*C*LY*FSASQTYM 4317 Score = 24.9 bits (48), Expect(2) = 1.4 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = +3 / -2 Query: 504 LCG*MNQLYHIHITYFF 554 LC NQL H HI +F+ Sbjct: 4463 LCKFQNQLLHKHIPHFY 4413
>LOC_Os07g46240:12007.t04260:unspliced-genomic expressed protein| Length = 3750 Score = 33.6 bits (67), Expect = 1.4 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = +1 / +1 Query: 310 TRCACSWTASPRP 348 +RCACSW+ SPRP Sbjct: 1576 SRCACSWSTSPRP 1614
>LOC_Os06g18920:12006.t01715:unspliced-genomic hypothetical protein| Length = 1119 Score = 33.6 bits (67), Expect = 1.4 Identities = 13/25 (52%), Positives = 13/25 (52%) Frame = -3 / +1 Query: 238 ASSRPSPWFRWPTTXXXXXXXXSRP 164 ASS P PW RWPTT RP Sbjct: 361 ASSPPPPWRRWPTTPSSSLASPHRP 435
>LOC_Os06g46540:12006.t04340:unspliced-genomic cell division cycle protein 23, putative, expressed| Length = 3817 Score = 27.2 bits (53), Expect(2) = 2.0 Identities = 14/55 (25%), Positives = 23/55 (41%) Frame = +1 / +1 Query: 322 CSWTASPRPDIRR*TGVHSGAWEPIPCAVIPLVPLVHKLFFHR*SSDSSSCLPFE 486 C W+ S ++ G+H + + A+ + P VH L + *S FE Sbjct: 739 CQWSNSSGILLKETIGIHQNYCKNVKVALFGMFPFVHGLSANL*SPRGGDASIFE 903 Score = 23.1 bits (44), Expect(2) = 2.0 Identities = 11/38 (28%), Positives = 20/38 (52%) Frame = +3 / +1 Query: 525 LYHIHITYFFVILVVVLVNYTDTKQKSSMYIYMTVYAL 638 L H + F L + LVN + +++ + +Y+T Y L Sbjct: 919 LSHNDVLLIFGTLNLNLVNVSTSEKMLNPLLYITAYLL 1032
>LOC_Os11g37200:12011.t03262:unspliced-genomic transmembrane BAX inhibitor motif-containing protein 4, putative,| expressed Length = 4095 Score = 32.2 bits (64), Expect = 3.7 Identities = 14/23 (60%), Positives = 16/23 (69%) Frame = -1 / -1 Query: 156 RTKRRQPRPSLGPHTLGFSSSSV 88 R +RR+PRPS LGFSSS V Sbjct: 114 RRRRRRPRPSTFRRRLGFSSSRV 46
>LOC_Os10g33440:12010.t02644:unspliced-genomic NB-ARC domain containing protein, expressed| Length = 6345 Score = 32.2 bits (64), Expect = 3.7 Identities = 15/43 (34%), Positives = 19/43 (44%) Frame = +1 / +3 Query: 7 PLIQAVTEREEANRARQPSFPSSVCVADRRAREAKSVWTERWP 135 P + + T E +R+ S PS A RRA W E WP Sbjct: 804 PGVASRTASERPRCSRRSSRPSLTAAAPRRAPRPSPSWRECWP 932
>LOC_Os04g38810:12004.t03451:unspliced-genomic actin binding protein, putative, expressed| Length = 3122 Score = 32.2 bits (64), Expect = 3.7 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = -1 / -1 Query: 159 WRTKRRQPRPSLGPHTLGFSSSSVCYAHTRWKRR 58 WR +RR+ R G T +CY RW+RR Sbjct: 1304 WRRRRRRWRWGNGRSTACLDILLLCYCRRRWRRR 1203
>LOC_Os04g28910:12004.t02586:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3428 Score = 32.2 bits (64), Expect = 3.7 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -3 / +3 Query: 265 WICTVFAASASSRPSPWFRWPT 200 ++ TV A S S P+PW RW T Sbjct: 2340 FLSTVVAQSTFSSPAPWMRWET 2405
>LOC_Os04g22120:12004.t01943:unspliced-genomic protein kinase, putative, expressed| Length = 5504 Score = 32.2 bits (64), Expect = 3.7 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = -3 / -2 Query: 676 FFFFFAR*PDNPFKAYTVIYIYILLFCFVSV 584 +FFF R P+ Y IYIYI ++ ++ + Sbjct: 2167 YFFFIVRKFTFPYSIYIYIYIYIYIYIYIYI 2075
>LOC_Os01g69030:12001.t06257:unspliced-genomic sucrose-phosphate synthase, putative, expressed| Length = 5783 Score = 31.8 bits (63), Expect = 5.1 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -1 / -3 Query: 156 RTKRRQPRPSLGPHTLGFSSSSVCYAHTRW 67 R R QP+P LG T S S+C+ RW Sbjct: 2799 RKSRNQPQPRLGAVTSARQSQSLCHHLHRW 2710
>LOC_Os11g43760:12011.t03906:unspliced-genomic triacylglycerol lipase, putative| Length = 5654 Score = 31.8 bits (63), Expect = 5.1 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = -2 / +1 Query: 362 HRRISGRGEAVHEHAHRVLGVG 297 H R SGRGE +H+ + R+LG G Sbjct: 3838 HHRNSGRGETLHQLSLRILGNG 3903
>LOC_Os03g39050:12003.t03347:unspliced-genomic no apical meristem protein| Length = 1442 Score = 28.6 bits (56), Expect(2) = 6.1 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = -2 / -2 Query: 188 CRRRRLPAQLGEPNADNP 135 CRRRRL +LG P A +P Sbjct: 340 CRRRRLHRRLGRPAARHP 287 Score = 23.1 bits (44), Expect(2) = 6.1 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = -1 / -3 Query: 414 RNHSTRYRLPCAGMNTG 364 R+H R+RLP + TG Sbjct: 1251 RHHHHRHRLPLSATRTG 1201
>LOC_Os11g17690:12011.t01546:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5152 Score = 31.3 bits (62), Expect = 7.0 Identities = 17/42 (40%), Positives = 20/42 (47%) Frame = +1 / +3 Query: 322 CSWTASPRPDIRR*TGVHSGAWEPIPCAVIPLVPLVHKLFFH 447 C +ASP +RR T S A P PL+PL LF H Sbjct: 879 CRRSASPPQGVRRPTSKQSSAAGPQEGLKRPLLPLPRTLFAH 1004
>LOC_Os07g33410:12007.t03020:unspliced-genomic ATPase, AAA family protein| Length = 3646 Score = 31.3 bits (62), Expect = 7.0 Identities = 15/33 (45%), Positives = 16/33 (48%) Frame = -2 / -3 Query: 386 HAPE*TPVHRRISGRGEAVHEHAHRVLGVGEDA 288 HAP+ RR G A H H HR LG G A Sbjct: 2915 HAPDPPSGGRRGGGSASARHHHPHRPLGNGLSA 2817
>LOC_Os02g42990:12002.t03884:unspliced-genomic OsSAUR11 - Auxin-responsive SAUR gene family member, expressed| Length = 980 Score = 31.3 bits (62), Expect = 7.0 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -3 / +2 Query: 265 WICTVFAASASSRPSPWFRWPTT 197 W CT AAS SR W RW T+ Sbjct: 437 WRCTWAAASPGSR*GTWCRWSTS 505
>LOC_Os01g04840:12001.t00371:unspliced-genomic vacuolar sorting protein 4b, putative| Length = 3527 Score = 31.3 bits (62), Expect = 7.0 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = +3 / +1 Query: 498 NKLCG*MNQLYHIHITYFFVILVVVLVNY 584 NK G +YH++ ++F ++L++VLV Y Sbjct: 1270 NKYLGMERVVYHMYFSFFSLLLLLVLVQY 1356
>LOC_Os11g24510:12011.t02072:unspliced-genomic serine carboxypeptidase 1 precursor, putative, expressed| Length = 7992 Score = 29.0 bits (57), Expect(2) = 8.3 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = +3 / -1 Query: 537 HITYFFVILVVVLVNYTDTKQKSSMYIYMTVYA 635 H ++ V++++ L NYT T + IY+T+ A Sbjct: 3012 HSSFSLVLVLMALFNYTSTIRVHEQIIYITLTA 2914 Score = 24.4 bits (47), Expect(2) = 8.3 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +2 / -3 Query: 416 WFLLYISSFFIANRVIVAHAFRLKR 490 WF YI +FFI N + + L+R Sbjct: 4978 WFGRYIDAFFIQNMCL*NFSHELQR 4904
>LOC_Os10g13550:12010.t01084:unspliced-genomic calcium ion binding protein, putative, expressed| Length = 4060 Score = 28.6 bits (56), Expect(2) = 8.4 Identities = 15/50 (30%), Positives = 22/50 (44%) Frame = -1 / -1 Query: 465 TITRLAMKKELMYKRNQRNHSTRYRLPCAGMNTGSPAYIRPGRSGP*ACT 316 T R +K K+ + N+S +N+GS Y+ S P* CT Sbjct: 3967 TYNRQQLKANE*TKKRKENYSVALCYSILYLNSGSAVYLTISESIP*CCT 3818 Score = 24.0 bits (46), Expect(2) = 8.4 Identities = 6/12 (50%), Positives = 10/12 (83%) Frame = -2 / -3 Query: 332 VHEHAHRVLGVG 297 +H H HR++G+G Sbjct: 2033 LHTHPHRMIGIG 1998
>LOC_Os11g06990:12011.t00591:unspliced-genomic expressed protein| Length = 4568 Score = 25.4 bits (49), Expect(2) = 8.4 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -1 / -2 Query: 408 HSTRYRLPCAGMNTGS 361 H+TR RLPC TG+ Sbjct: 508 HATRIRLPCHVRRTGT 461 Score = 22.6 bits (43), Expect(2) = 8.4 Identities = 8/17 (47%), Positives = 10/17 (58%) Frame = -3 / -3 Query: 265 WICTVFAASASSRPSPW 215 W C + A SAS P P+ Sbjct: 423 WPCILQATSASQDPCPY 373
>LOC_Os05g11320:12005.t00964:unspliced-genomic metallothionein-like protein type 3, putative, expressed| Length = 2214 Score = 27.6 bits (54), Expect(2) = 9.0 Identities = 12/37 (32%), Positives = 16/37 (43%) Frame = +1 / +3 Query: 28 EREEANRARQPSFPSSVCVADRRAREAKSVWTERWPG 138 ER + + R PS P CV +RR + W G Sbjct: 639 ERGTSLKGRMPS*PLEACVVERRGETHARARSLAWQG 749 Score = 24.0 bits (46), Expect(2) = 9.0 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +3 / +2 Query: 372 SFRRMGAYTLCCDSAGSSCT*ALFS 446 SFR +G ++CC SC A F+ Sbjct: 1316 SFRHLGTCSICCAYLICSCYSA*FT 1390
>LOC_Os12g06810:12012.t00566:unspliced-genomic WD-repeat protein 48, putative, expressed| Length = 11289 Score = 30.9 bits (61), Expect = 9.7 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = -1 / -1 Query: 450 AMKKELMYKRNQRNHSTRYRLPCAGMNT 367 ++K ++ K+NQ+ HS YR+P G T Sbjct: 6105 SIKYQIHSKKNQKTHSMNYRVPEIGTET 6022
>LOC_Os08g38930:12008.t03627:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2113 Score = 30.9 bits (61), Expect = 9.7 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = -1 / +3 Query: 147 RRQPRPSLGPHTLGFSSSSVCYAHTRWKRR 58 RR+PR + PH+ +++SVC A R +RR Sbjct: 1011 RRRPRAVVPPHSCHRATASVCRAVRRRRRR 1100
>LOC_Os08g10300:12008.t00915:unspliced-genomic SHR5-receptor-like kinase, putative, expressed| Length = 7200 Score = 30.9 bits (61), Expect = 9.7 Identities = 13/44 (29%), Positives = 21/44 (47%) Frame = +1 / +1 Query: 319 ACSWTASPRPDIRR*TGVHSGAWEPIPCAVIPLVPLVHKLFFHR 450 ACSW A R ++ G + E + + L+ +H+L HR Sbjct: 307 ACSWVAVARAQAQKPAGATTDPVEGMYICIYQLITCIHRLQRHR 438
>LOC_Os01g71250:12001.t06421:unspliced-genomic expressed protein| Length = 3106 Score = 30.9 bits (61), Expect = 9.7 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -1 / -1 Query: 159 WRTKRRQPRPSLGPHTLGFSSSS 91 WR +R +PRP+ LG SSSS Sbjct: 79 WRWRRTEPRPAGAQAALGISSSS 11
>LOC_Os08g45000:12008.t04222:unspliced-genomic inorganic phosphate transporter 1-7, putative, expressed| Length = 1827 Score = 30.9 bits (61), Expect = 9.7 Identities = 15/49 (30%), Positives = 21/49 (42%) Frame = -3 / +1 Query: 343 GAKRSMSMHTVSSELERTXXXXXXLSWICTVFAASASSRPSPWFRWPTT 197 GA+RS S+ R+ W C+ ++ S R S W R P T Sbjct: 1441 GARRSTGTLRASASATRSSCSPPATCWACSSPSSCRSPRGSRWRRCPAT 1587
>LOC_Os12g30824:12012.t02788:unspliced-genomic ent-kaurene synthase B, chloroplast precursor, putative, expressed| Length = 18858 Score = 24.4 bits (47), Expect(2) = 9.9 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = +2 / +3 Query: 608 YVYIYDCICFEWIVWL 655 Y+YIY CIC V++ Sbjct: 16911 YMYIYICICIYIYVYI 16958 Score = 23.1 bits (44), Expect(2) = 9.9 Identities = 10/33 (30%), Positives = 15/33 (45%) Frame = +2 / +1 Query: 533 YSYHILFCNSCRGFS*LY*YETKE*YVYIYDCI 631 Y + + C ++ Y Y Y+YIY CI Sbjct: 16822 YQQELKYFERCSRYALRYSYIYIYMYIYIYICI 16920 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 237,016,266 Number of extensions: 3509198 Number of successful extensions: 19137 Number of sequences better than 10.0: 30 Length of query: 226 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 177 Effective length of database: 52,856,264 Effective search space: 9355558728 Effective search space used: 9355558728 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)