ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf86d19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001057919.1| Oryza sativa (japonica cultivar-group) Os03g0766800 (Os03g0766800) mRNA, complete cds Length = 558 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 292 tcctctccaactccgaggacacggtgtgcatgctcatggaccgcttcgccccggcctga 350 |||||||| ||||||||| ||| ||||||||||||||||||||||||||||| |||||| Sbjct: 305 tcctctccgactccgaggccaccgtgtgcatgctcatggaccgcttcgcccctgcctga 363
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence Length = 159091 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 292 tcctctccaactccgaggacacggtgtgcatgctcatggaccgcttcgccccggcctga 350 |||||||| ||||||||| ||| ||||||||||||||||||||||||||||| |||||| Sbjct: 41377 tcctctccgactccgaggccaccgtgtgcatgctcatggaccgcttcgcccctgcctga 41319
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 292 tcctctccaactccgaggacacggtgtgcatgctcatggaccgcttcgccccggcctga 350 |||||||| ||||||||| ||| ||||||||||||||||||||||||||||| |||||| Sbjct: 31544939 tcctctccgactccgaggccaccgtgtgcatgctcatggaccgcttcgcccctgcctga 31544997
>dbj|AK120228.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042P21, full insert sequence Length = 561 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 292 tcctctccaactccgaggacacggtgtgcatgctcatggaccgcttcgccccggcctga 350 |||||||| ||||||||| ||| ||||||||||||||||||||||||||||| |||||| Sbjct: 308 tcctctccgactccgaggccaccgtgtgcatgctcatggaccgcttcgcccctgcctga 366
>emb|CT828015.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI023B06, full insert sequence Length = 957 Score = 71.9 bits (36), Expect = 3e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 303 tccgaggacacggtgtgcatgctcatggaccgcttcgccccggcctga 350 ||||||| ||| ||||||||||||||||||||||||||||| |||||| Sbjct: 706 tccgaggccaccgtgtgcatgctcatggaccgcttcgcccctgcctga 753
>emb|CR936479.7| Zebrafish DNA sequence from clone CH211-133H24 in linkage group 21, complete sequence Length = 39736 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 465 tagctcatgccttccgtttgaaaagaaaa 493 |||||||||||||| |||||||||||||| Sbjct: 773 tagctcatgccttcagtttgaaaagaaaa 745
>emb|BX005227.12| Zebrafish DNA sequence from clone CH211-286C23 in linkage group 21, complete sequence Length = 187709 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 465 tagctcatgccttccgtttgaaaagaaaa 493 |||||||||||||| |||||||||||||| Sbjct: 186483 tagctcatgccttcagtttgaaaagaaaa 186455
>emb|AL807247.10| Mouse DNA sequence from clone RP23-178D3 on chromosome 4, complete sequence Length = 184686 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 266 ggagaggaggaggaggaacagcagc 290 ||||||||||||||||||||||||| Sbjct: 72553 ggagaggaggaggaggaacagcagc 72529
>emb|AM180263.1| Hordeum vulgare mybS3 gene for transcription factor MybS3, exons 1-3 Length = 3147 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 556 taattcttgtcgtggttttagtt 578 ||||||||||||||||||||||| Sbjct: 1144 taattcttgtcgtggttttagtt 1122
>gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940141D9, complete sequence Length = 117679 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 174 gcggcgccggcggcagaggccga 196 ||||||||||||||||||||||| Sbjct: 27916 gcggcgccggcggcagaggccga 27894
>gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940130D9, complete sequence Length = 117683 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 174 gcggcgccggcggcagaggccga 196 ||||||||||||||||||||||| Sbjct: 89767 gcggcgccggcggcagaggccga 89789
>gb|AC120144.11| Mus musculus chromosome 8, clone RP24-427K8, complete sequence Length = 210003 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 607 gtatgtatatatatatgactgtatatg 633 |||||| |||||||||||||||||||| Sbjct: 22376 gtatgtgtatatatatgactgtatatg 22350
>gb|AC126283.3| Homo sapiens BAC clone RP11-602N24 from 4, complete sequence Length = 118642 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 268 agaggaggaggaggaacagcagc 290 ||||||||||||||||||||||| Sbjct: 24655 agaggaggaggaggaacagcagc 24677
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 166 gccgggaggcggcgccggcggca 188 ||||||||||||||||||||||| Sbjct: 14812471 gccgggaggcggcgccggcggca 14812493
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 166 gccgggaggcggcgccggcggca 188 ||||||||||||||||||||||| Sbjct: 17686592 gccgggaggcggcgccggcggca 17686570
>gb|AC079899.16| Homo sapiens 4 BAC RP11-399C9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166679 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 628 tatatgctttgaatggattgtct 650 ||||||||||||||||||||||| Sbjct: 113909 tatatgctttgaatggattgtct 113887
>emb|AL354735.14| Human DNA sequence from clone RP11-738I14 on chromosome 9 Contains the 3' end of the DDX31 gene for DEAD/H box polypeptide 31, the BARHL1 gene for BarH-like 1 (Drosophila) protein, two novel genes and three CpG islands, complete sequence Length = 189821 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 607 gtatgtatatatatatgactgtatatg 633 ||||||||||||||||| ||||||||| Sbjct: 32829 gtatgtatatatatatgcctgtatatg 32855
>gb|AC136636.6| Mus musculus BAC clone RP24-183E22 from chromosome 1, complete sequence Length = 182542 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 268 agaggaggaggaggaacagcagc 290 ||||||||||||||||||||||| Sbjct: 107808 agaggaggaggaggaacagcagc 107786
>dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0094H06 Length = 147245 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 166 gccgggaggcggcgccggcggca 188 ||||||||||||||||||||||| Sbjct: 68127 gccgggaggcggcgccggcggca 68105
>dbj|AP005928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0031F23 Length = 128090 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 166 gccgggaggcggcgccggcggca 188 ||||||||||||||||||||||| Sbjct: 27744 gccgggaggcggcgccggcggca 27766
>dbj|AP004802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0640D01 Length = 164996 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 166 gccgggaggcggcgccggcggca 188 ||||||||||||||||||||||| Sbjct: 123555 gccgggaggcggcgccggcggca 123577
>gb|AC122193.5| Mus musculus BAC clone RP23-45G16 from 6, complete sequence Length = 211512 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 268 agaggaggaggaggaacagcagc 290 ||||||||||||||||||||||| Sbjct: 197060 agaggaggaggaggaacagcagc 197082
>gb|AC007370.7|AC007370 Homo sapiens, clone 22_A_3, complete sequence Length = 176426 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 628 tatatgctttgaatggattgtct 650 ||||||||||||||||||||||| Sbjct: 48010 tatatgctttgaatggattgtct 47988
>gb|AC140287.3| Mus musculus BAC clone RP23-346L16 from 6, complete sequence Length = 213473 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 268 agaggaggaggaggaacagcagc 290 ||||||||||||||||||||||| Sbjct: 138035 agaggaggaggaggaacagcagc 138013
>gb|AC126450.4| Mus musculus BAC clone RP23-379J7 from 3, complete sequence Length = 159914 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 268 agaggaggaggaggaacagcagc 290 ||||||||||||||||||||||| Sbjct: 142636 agaggaggaggaggaacagcagc 142614 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 268 agaggaggaggaggaacagcagc 290 ||||||||||||||||||||||| Sbjct: 142774 agaggaggaggaggaacagcagc 142752 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 268 agaggaggaggaggaacagcagc 290 ||||||||||||||||||||||| Sbjct: 143004 agaggaggaggaggaacagcagc 142982 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 268 agaggaggaggaggaacagcagc 290 ||||||||||||||||||||||| Sbjct: 143310 agaggaggaggaggaacagcagc 143288 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 gaggaggaggaggaacagcagc 290 |||||||||||||||||||||| Sbjct: 143382 gaggaggaggaggaacagcagc 143361 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 aggaggaggaggaacagcagc 290 ||||||||||||||||||||| Sbjct: 143533 aggaggaggaggaacagcagc 143513
>gb|AC163442.16| Mus musculus chromosome 8, clone RP23-441L19, complete sequence Length = 214994 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 607 gtatgtatatatatatgactgtatatg 633 |||||| |||||||||||||||||||| Sbjct: 202736 gtatgtgtatatatatgactgtatatg 202710
>emb|CR855214.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0315A08, complete sequence Length = 86072 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 173 ggcggcgccggcggcagaggccgagg 198 ||||||||||||||| |||||||||| Sbjct: 30114 ggcggcgccggcggcggaggccgagg 30139
>emb|CR855082.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0139J17, complete sequence Length = 114561 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 167 ccgggaggcggcgccggcggca 188 |||||||||||||||||||||| Sbjct: 25676 ccgggaggcggcgccggcggca 25697
>gb|AC186874.3| Gallus gallus BAC clone TAM31-31H9 from chromosome z, complete sequence Length = 185763 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 607 gtatgtatatatatatgactgtatat 632 |||||||||||||||||| ||||||| Sbjct: 36882 gtatgtatatatatatgaatgtatat 36857
>ref|NM_001059392.1| Oryza sativa (japonica cultivar-group) Os04g0437300 (Os04g0437300) mRNA, complete cds Length = 1799 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 173 ggcggcgccggcggcagaggccgagg 198 ||||||||||||||| |||||||||| Sbjct: 651 ggcggcgccggcggcggaggccgagg 676
>gb|AC189119.2| Gallus gallus BAC clone CH261-26L3 from chromosome z, complete sequence Length = 222052 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 607 gtatgtatatatatatgactgtatat 632 |||||||||||||||||| ||||||| Sbjct: 162462 gtatgtatatatatatgaatgtatat 162437
>gb|DQ483969.1| Gymnogyps californianus contig 135G genomic sequence Length = 511 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 gaggaggaggaggaacagcagc 290 |||||||||||||||||||||| Sbjct: 440 gaggaggaggaggaacagcagc 419
>gb|AC102081.15| Mus musculus chromosome 18, clone RP23-43H5, complete sequence Length = 245125 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 gaggaggaggaggaacagcagc 290 |||||||||||||||||||||| Sbjct: 214584 gaggaggaggaggaacagcagc 214563
>gb|AC159201.2| Mus musculus BAC clone RP23-340E6 from chromosome 13, complete sequence Length = 187967 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 265 aggagaggaggaggaggaacagcagc 290 ||||||||||||||||||| |||||| Sbjct: 165647 aggagaggaggaggaggaaaagcagc 165672
>gb|AC120308.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0070D17 map G44, complete sequence Length = 135627 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 265 aggagaggaggaggaggaacag 286 |||||||||||||||||||||| Sbjct: 96639 aggagaggaggaggaggaacag 96660
>gb|AC136004.10| Mus musculus chromosome 7, clone RP23-235M8, complete sequence Length = 185174 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 gaggaggaggaggaacagcagc 290 |||||||||||||||||||||| Sbjct: 112985 gaggaggaggaggaacagcagc 112964
>gb|AC138654.4| Mus musculus BAC clone RP23-344O11 from chromosome 5, complete sequence Length = 198036 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 269 gaggaggaggaggaacagcagc 290 |||||||||||||||||||||| Sbjct: 142430 gaggaggaggaggaacagcagc 142451
>gb|AC097354.12| Mus musculus strain 129/Sv clone ct7-297f7 map X, complete sequence Length = 242318 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 gaggaggaggaggaacagcagc 290 |||||||||||||||||||||| Sbjct: 100480 gaggaggaggaggaacagcagc 100459
>gb|AC159149.10| Mus musculus 10 BAC RP23-56F17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219585 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 269 gaggaggaggaggaacagcagc 290 |||||||||||||||||||||| Sbjct: 123438 gaggaggaggaggaacagcagc 123459
>gb|AC162361.7| Mus musculus chromosome 7, clone RP23-177P20, complete sequence Length = 230870 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 gaggaggaggaggaacagcagc 290 |||||||||||||||||||||| Sbjct: 197424 gaggaggaggaggaacagcagc 197403
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 175 cggcgccggcggcagaggccgaggtc 200 |||||||||||||| ||||||||||| Sbjct: 2162771 cggcgccggcggcaaaggccgaggtc 2162796
>dbj|AB040292.1| Mus musculus Mtch1 gene for mitochondiral carrier homolog 1 isoform a and b, complete cds Length = 21984 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 269 gaggaggaggaggaacagcagc 290 |||||||||||||||||||||| Sbjct: 19662 gaggaggaggaggaacagcagc 19683
>gb|AC163635.5| Mus musculus BAC clone RP23-183F13 from chromosome 17, complete sequence Length = 185844 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 gaggaggaggaggaacagcagc 290 |||||||||||||||||||||| Sbjct: 73584 gaggaggaggaggaacagcagc 73563
>gb|AC165262.2| Mus musculus BAC clone RP23-89H5 from chromosome 14, complete sequence Length = 201412 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 gaggaggaggaggaacagcagc 290 |||||||||||||||||||||| Sbjct: 171092 gaggaggaggaggaacagcagc 171071
>gb|AC111017.23| Mus musculus chromosome 13, clone RP23-62F4, complete sequence Length = 239344 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 265 aggagaggaggaggaggaacagcagc 290 ||||||||||||||||||| |||||| Sbjct: 17413 aggagaggaggaggaggaaaagcagc 17438
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 265 aggagaggaggaggaggaacag 286 |||||||||||||||||||||| Sbjct: 9828280 aggagaggaggaggaggaacag 9828301
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 265 aggagaggaggaggaggaacagcagc 290 |||||||||||||||||| ||||||| Sbjct: 13585798 aggagaggaggaggaggagcagcagc 13585773
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 167 ccgggaggcggcgccggcggca 188 |||||||||||||||||||||| Sbjct: 14254753 ccgggaggcggcgccggcggca 14254774 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 173 ggcggcgccggcggcagaggccgagg 198 ||||||||||||||| |||||||||| Sbjct: 21754753 ggcggcgccggcggcggaggccgagg 21754778
>emb|AL353700.14| Human DNA sequence from clone RP3-350J21 on chromosome 6 Contains part of the DNAH8 gene for dynein axonemal heavy polypeptide 8 and the 5' part of a novel gene, complete sequence Length = 56509 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 269 gaggaggaggaggaacagcagc 290 |||||||||||||||||||||| Sbjct: 28667 gaggaggaggaggaacagcagc 28688
>gb|AC162182.2| Mus musculus BAC clone RP23-73B23 from chromosome 17, complete sequence Length = 205221 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 269 gaggaggaggaggaacagcagc 290 |||||||||||||||||||||| Sbjct: 66744 gaggaggaggaggaacagcagc 66765
>gb|AC060788.11| Homo sapiens chromosome 8, clone CTD-2008O4, complete sequence Length = 177717 Score = 44.1 bits (22), Expect = 0.64 Identities = 28/30 (93%) Strand = Plus / Plus Query: 6 cccactcatccaagcagtgactgaaagaga 35 |||||||||||||||||||| |||||||| Sbjct: 111624 cccactcatccaagcagtgatggaaagaga 111653
>emb|AL663007.2|OSJN00206 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0054B09, complete sequence Length = 146506 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 167 ccgggaggcggcgccggcggca 188 |||||||||||||||||||||| Sbjct: 92518 ccgggaggcggcgccggcggca 92539
>gb|BC029723.1| Mus musculus mitochondrial carrier homolog 1 (C. elegans), mRNA (cDNA clone IMAGE:5035572), with apparent retained intron Length = 2298 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 269 gaggaggaggaggaacagcagc 290 |||||||||||||||||||||| Sbjct: 894 gaggaggaggaggaacagcagc 915
>gb|AC156949.9| Mus musculus 10 BAC RP24-347J14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 149183 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 269 gaggaggaggaggaacagcagc 290 |||||||||||||||||||||| Sbjct: 8467 gaggaggaggaggaacagcagc 8488
>gb|AC098858.3| Homo sapiens BAC clone RP11-149A7 from 4, complete sequence Length = 172419 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 265 aggagaggaggaggaggaacag 286 |||||||||||||||||||||| Sbjct: 13301 aggagaggaggaggaggaacag 13280
>gb|AC155938.6| Mus musculus 10 BAC RP24-421D7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 157047 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 gaggaggaggaggaacagcagc 290 |||||||||||||||||||||| Sbjct: 138011 gaggaggaggaggaacagcagc 137990
>dbj|AP006453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1339H09 Length = 131136 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 265 aggagaggaggaggaggaacagcagc 290 |||||||||||||||||| ||||||| Sbjct: 23214 aggagaggaggaggaggagcagcagc 23189
>dbj|AP007149.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, fosmid clone:OSJNOa018M17 Length = 36758 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 265 aggagaggaggaggaggaacagcagc 290 |||||||||||||||||| ||||||| Sbjct: 33784 aggagaggaggaggaggagcagcagc 33759
>dbj|AK121647.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058N21, full insert sequence Length = 1800 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 173 ggcggcgccggcggcagaggccgagg 198 ||||||||||||||| |||||||||| Sbjct: 652 ggcggcgccggcggcggaggccgagg 677
>gb|AC154206.2| Mus musculus BAC clone RP24-104P20 from 14, complete sequence Length = 167116 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 269 gaggaggaggaggaacagcagc 290 |||||||||||||||||||||| Sbjct: 61926 gaggaggaggaggaacagcagc 61947
>gb|AC153824.9| Mus musculus 10 BAC RP23-53D13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 233119 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 269 gaggaggaggaggaacagcagc 290 |||||||||||||||||||||| Sbjct: 124814 gaggaggaggaggaacagcagc 124835
>gb|AC140416.2| Mus musculus BAC clone RP24-347A16 from 6, complete sequence Length = 188390 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 269 gaggaggaggaggaacagcagc 290 |||||||||||||||||||||| Sbjct: 152921 gaggaggaggaggaacagcagc 152942
>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20, complete sequence Length = 141915 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 173 ggcggcgccggcggcagaggccgagg 198 ||||||||||||||| |||||||||| Sbjct: 66370 ggcggcgccggcggcggaggccgagg 66395
>gb|AC130535.4| Mus musculus BAC clone RP23-326O2 from 5, complete sequence Length = 193752 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 gaggaggaggaggaacagcagc 290 |||||||||||||||||||||| Sbjct: 98852 gaggaggaggaggaacagcagc 98831
>emb|AL731893.11| Mouse DNA sequence from clone RP23-134C8 on chromosome X, complete sequence Length = 139552 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 gaggaggaggaggaacagcagc 290 |||||||||||||||||||||| Sbjct: 130926 gaggaggaggaggaacagcagc 130905
>emb|AL671854.14| Mouse DNA sequence from clone RP23-89M15 on chromosome 3, complete sequence Length = 207265 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 gaggaggaggaggaacagcagc 290 |||||||||||||||||||||| Sbjct: 10642 gaggaggaggaggaacagcagc 10621
>emb|AL773523.4| Mouse DNA sequence from clone RP23-186B18 on chromosome 2, complete sequence Length = 198403 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 612 tatatatatatgactgtatatg 633 |||||||||||||||||||||| Sbjct: 57014 tatatatatatgactgtatatg 56993
>ref|XM_001027451.1| Tetrahymena thermophila SB210 cyclic nucleotide-binding domain containing protein (TTHERM_00647420) mRNA, complete cds Length = 9276 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 572 tttagttaattatactgatac 592 ||||||||||||||||||||| Sbjct: 7731 tttagttaattatactgatac 7751
>gb|AC187357.2| Pongo pygmaeus abelii BAC clone CH276-66H12 from chromosome unknown, complete sequence Length = 126290 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 612 tatatatatatgactgtatatgctt 636 |||||||||||| |||||||||||| Sbjct: 93397 tatatatatatgtctgtatatgctt 93373
>ref|XM_416218.2| PREDICTED: Gallus gallus similar to transcription factor 20 (LOC417980), mRNA Length = 7219 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 agaggaggaggaggaacagca 288 ||||||||||||||||||||| Sbjct: 5417 agaggaggaggaggaacagca 5437
>gb|AC188161.3| Canis Familiaris chromosome 26, clone XX-320A4, complete sequence Length = 195501 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/32 (93%), Gaps = 2/32 (6%) Strand = Plus / Minus Query: 607 gtatgtatatatatatgactgtatatgctttg 638 ||||||||||||||||| ||||||||||||| Sbjct: 87507 gtatgtatatatatatg--tgtatatgctttg 87478
>gb|DQ414252.1| Zea mays anthocyanin regulatory LC protein (lc1) gene, complete cds Length = 9539 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 605 tagtatgtatatatatatgac 625 ||||||||||||||||||||| Sbjct: 5583 tagtatgtatatatatatgac 5603
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 269 gaggaggaggaggaacagcag 289 ||||||||||||||||||||| Sbjct: 10453706 gaggaggaggaggaacagcag 10453686
>gb|AC189728.3| Canis Familiaris, clone XX-424C17, complete sequence Length = 40803 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 599 aaagagtagtatgtatatatatatg 623 ||||| ||||||||||||||||||| Sbjct: 30654 aaagattagtatgtatatatatatg 30630
>tpg|BK000383.1| TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene, alternatively spliced, complete cds Length = 1421559 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 610 tgtatatatatatgactgtat 630 ||||||||||||||||||||| Sbjct: 1211046 tgtatatatatatgactgtat 1211026
>ref|XM_001059159.1| PREDICTED: Rattus norvegicus cartilage acidic protein 1, transcript variant 2 (Crtac1), mRNA Length = 2611 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 ggcggcgccggcggcagaggc 193 ||||||||||||||||||||| Sbjct: 78 ggcggcgccggcggcagaggc 98
>ref|XM_001059110.1| PREDICTED: Rattus norvegicus cartilage acidic protein 1, transcript variant 1 (Crtac1), mRNA Length = 2020 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 ggcggcgccggcggcagaggc 193 ||||||||||||||||||||| Sbjct: 78 ggcggcgccggcggcagaggc 98
>ref|XM_001064183.1| PREDICTED: Rattus norvegicus cartilage acidic protein 1, transcript variant 1 (Crtac1), mRNA Length = 2611 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 ggcggcgccggcggcagaggc 193 ||||||||||||||||||||| Sbjct: 78 ggcggcgccggcggcagaggc 98
>ref|XM_574670.2| PREDICTED: Rattus norvegicus cartilage acidic protein 1, transcript variant 2 (Crtac1), mRNA Length = 2020 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 ggcggcgccggcggcagaggc 193 ||||||||||||||||||||| Sbjct: 78 ggcggcgccggcggcagaggc 98
>ref|XR_011453.1| PREDICTED: Macaca mulatta similar to purine rich element binding protein B (LOC705519), mRNA Length = 8761 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 ccgggaggcggcgccggcggc 187 ||||||||||||||||||||| Sbjct: 289 ccgggaggcggcgccggcggc 309
>emb|CT010584.19| Mouse DNA sequence from clone RP23-383B20 on chromosome 16, complete sequence Length = 199010 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 169 gggaggcggcgccggcggcagaggc 193 ||||||||||| ||||||||||||| Sbjct: 146664 gggaggcggcggcggcggcagaggc 146688
>gb|DQ483989.1| Gymnogyps californianus contig 155G genomic sequence Length = 593 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 269 gaggaggaggaggaacagcag 289 ||||||||||||||||||||| Sbjct: 42 gaggaggaggaggaacagcag 22
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 cggcgccggcggcagaggccg 195 ||||||||||||||||||||| Sbjct: 2849117 cggcgccggcggcagaggccg 2849097
>gb|AC153728.1| Mus musculus BAC RP23-83N17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226417 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 604 gtagtatgtatatatatatga 624 ||||||||||||||||||||| Sbjct: 218456 gtagtatgtatatatatatga 218436
>gb|AC113538.14| Mus musculus chromosome 8, clone RP23-118F24, complete sequence Length = 206380 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 606 agtatgtatatatatatgact 626 ||||||||||||||||||||| Sbjct: 86158 agtatgtatatatatatgact 86138
>gb|AC102525.8| Mus musculus chromosome 8, clone RP24-133K20, complete sequence Length = 162463 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 606 agtatgtatatatatatgact 626 ||||||||||||||||||||| Sbjct: 130131 agtatgtatatatatatgact 130111
>gb|AC097117.12| Rattus norvegicus 1 BAC CH230-36C10 (Children's Hospital Oakland Research Institute) complete sequence Length = 197926 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 ggcggcgccggcggcagaggc 193 ||||||||||||||||||||| Sbjct: 109559 ggcggcgccggcggcagaggc 109539
>ref|NM_018058.4| Homo sapiens cartilage acidic protein 1 (CRTAC1), mRNA Length = 2889 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 ggcggcgccggcggcagaggc 193 ||||||||||||||||||||| Sbjct: 282 ggcggcgccggcggcagaggc 302
>gb|AE009242.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 12 of 187 of the complete sequence Length = 10556 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 ggaggcggcgccggcggcaga 190 ||||||||||||||||||||| Sbjct: 3238 ggaggcggcgccggcggcaga 3258
>gb|AE008371.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 175 of 187 of the complete sequence Length = 11967 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 ggaggcggcgccggcggcaga 190 ||||||||||||||||||||| Sbjct: 8730 ggaggcggcgccggcggcaga 8710
>gb|AC123751.6| Mus musculus chromosome 8, clone RP24-187F1, complete sequence Length = 159523 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 266 ggagaggaggaggaggaacagcagc 290 ||||||||||||||||| ||||||| Sbjct: 107656 ggagaggaggaggaggagcagcagc 107680
>gb|AC113201.15| Mus musculus chromosome 6, clone RP23-271G7, complete sequence Length = 205816 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 604 gtagtatgtatatatatatga 624 ||||||||||||||||||||| Sbjct: 3177 gtagtatgtatatatatatga 3157
>gb|BC002209.1| Mus musculus cDNA clone IMAGE:3490279 Length = 395 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 ccgggaggcggcgccggcggc 187 ||||||||||||||||||||| Sbjct: 212 ccgggaggcggcgccggcggc 192
>gb|AC102902.6| Mus musculus chromosome 16, clone RP24-313G10, complete sequence Length = 122431 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 agaagccaagagtgtgtggac 122 ||||||||||||||||||||| Sbjct: 118654 agaagccaagagtgtgtggac 118674
>gb|AC124738.5| Mus musculus BAC clone RP23-344C15 from chromosome 14, complete sequence Length = 204590 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 613 atatatatatgactgtatatg 633 ||||||||||||||||||||| Sbjct: 165048 atatatatatgactgtatatg 165028
>gb|AC132244.3| Mus musculus BAC clone RP24-419I10 from chromosome 14, complete sequence Length = 185581 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 613 atatatatatgactgtatatg 633 ||||||||||||||||||||| Sbjct: 152046 atatatatatgactgtatatg 152066
>gb|AC112792.4| Mus musculus BAC clone RP23-192J17 from 18, complete sequence Length = 219784 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 caagcagtgactgaaagagaa 36 ||||||||||||||||||||| Sbjct: 75023 caagcagtgactgaaagagaa 75003
>ref|NM_142121.1| Drosophila melanogaster CG7886-RA (CG7886), mRNA Length = 3439 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 gaggaggaggaggaacagcag 289 ||||||||||||||||||||| Sbjct: 2206 gaggaggaggaggaacagcag 2226
>ref|NM_001017503.1| Rattus norvegicus transcription factor Pur-beta (pur-beta), mRNA dbj|AB182574.1| Rattus norvegicus pur-beta mRNA for transcription factor Pur-beta, complete cds Length = 2473 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 ccgggaggcggcgccggcggc 187 ||||||||||||||||||||| Sbjct: 646 ccgggaggcggcgccggcggc 666
>dbj|AK057190.1| Homo sapiens cDNA FLJ32628 fis, clone SYNOV1000118, highly similar to Homo sapiens mRNA for ASPIC (acidic secreted protein in cartilage) (ASPIC1 gene) Length = 2889 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 ggcggcgccggcggcagaggc 193 ||||||||||||||||||||| Sbjct: 282 ggcggcgccggcggcagaggc 302
>gb|AC139034.7| Mus musculus chromosome 6, clone RP23-350J11, complete sequence Length = 247394 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 604 gtagtatgtatatatatatga 624 ||||||||||||||||||||| Sbjct: 169383 gtagtatgtatatatatatga 169363
>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced Length = 1285452 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 610 tgtatatatatatgactgtat 630 ||||||||||||||||||||| Sbjct: 1211046 tgtatatatatatgactgtat 1211026
>gb|AC096070.7| Rattus norvegicus 4 BAC CH230-20J7 (Children's Hospital Oakland Research Institute) complete sequence Length = 231332 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 604 gtagtatgtatatatatatga 624 ||||||||||||||||||||| Sbjct: 190327 gtagtatgtatatatatatga 190307
>gb|AE014178.1| Mus musculus piebald deletion region section 6 of 11 of the complete sequence Length = 400029 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 613 atatatatatgactgtatatg 633 ||||||||||||||||||||| Sbjct: 363045 atatatatatgactgtatatg 363065
>dbj|AK081654.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130061G05 product:unclassifiable, full insert sequence Length = 2828 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 604 gtagtatgtatatatatatga 624 ||||||||||||||||||||| Sbjct: 2735 gtagtatgtatatatatatga 2755
>gb|AC009785.8| Homo sapiens chromosome 7 clone RP11-198E23, complete sequence Length = 179145 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 265 aggagaggaggaggaggaacagcag 289 |||||||||||||||||| |||||| Sbjct: 116972 aggagaggaggaggaggagcagcag 116948
>gb|AY113304.1| Drosophila melanogaster AT27185 full insert cDNA Length = 3416 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 gaggaggaggaggaacagcag 289 ||||||||||||||||||||| Sbjct: 2196 gaggaggaggaggaacagcag 2216
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 169 gggaggcggcgccggcggcagaggc 193 ||||||||||||||||||| ||||| Sbjct: 710627 gggaggcggcgccggcggcggaggc 710651
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 tgcagatccaggagaggaggaggag 280 |||||||||||||||| |||||||| Sbjct: 447766 tgcagatccaggagagaaggaggag 447742
>emb|CR974569.7| Pig DNA sequence from clone CH242-255C19 on chromosome 17, complete sequence Length = 104107 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 612 tatatatatatgactgtatat 632 ||||||||||||||||||||| Sbjct: 90683 tatatatatatgactgtatat 90663
>gb|AC083977.5| Homo sapiens chromosome 8, clone RP11-317J8, complete sequence Length = 212555 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 610 tgtatatatatatgactgtat 630 ||||||||||||||||||||| Sbjct: 139326 tgtatatatatatgactgtat 139306
>ref|XM_682349.1| PREDICTED: Danio rerio similar to coagulation factor VIII precursor (LOC559047), partial mRNA Length = 2110 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 ggagaggaggaggaggaacag 286 ||||||||||||||||||||| Sbjct: 33 ggagaggaggaggaggaacag 13
>emb|AL442203.12| Human DNA sequence from clone RP11-12I24 on chromosome 13 Contains the 5' end of a novel gene (contains KIAA0564 and FLJ21779) possible ortholog of RIKEN cDNA 1300010F03 gene, a lysyl-tRNA synthetase (KARS) pseudogene, a ribosomal protein S28 (RPS28) pseudogene and 2 CpG islands, complete sequence Length = 163511 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 aggaggaggaggaacagcagc 290 ||||||||||||||||||||| Sbjct: 32190 aggaggaggaggaacagcagc 32170
>gb|AC013561.9| Homo sapiens chromosome 8, clone RP11-301H15, complete sequence Length = 185249 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 610 tgtatatatatatgactgtat 630 ||||||||||||||||||||| Sbjct: 132151 tgtatatatatatgactgtat 132171
>emb|AL139239.18| Human DNA sequence from clone RP11-19C6 on chromosome 10 Contains the 5' end of the CRTAC1 gene for cartilage acidic protein 1 and two CpG islands, complete sequence Length = 161235 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 ggcggcgccggcggcagaggc 193 ||||||||||||||||||||| Sbjct: 159999 ggcggcgccggcggcagaggc 159979
>emb|AL136232.10| Human DNA sequence from clone RP11-200E24 on chromosome 10, complete sequence Length = 10920 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 606 agtatgtatatatatatgact 626 ||||||||||||||||||||| Sbjct: 6731 agtatgtatatatatatgact 6711
>gb|AC026720.6| Homo sapiens chromosome 5 clone CTD-2193G21, complete sequence Length = 151090 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 aaaagaaaagatgaataaatt 505 ||||||||||||||||||||| Sbjct: 101832 aaaagaaaagatgaataaatt 101852
>gb|AC008693.9| Homo sapiens chromosome 5 clone CTB-69A13, complete sequence Length = 203568 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 aaaagaaaagatgaataaatt 505 ||||||||||||||||||||| Sbjct: 75245 aaaagaaaagatgaataaatt 75265
>gb|AC016564.6| Homo sapiens chromosome 5 clone CTC-538E9, complete sequence Length = 132573 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 612 tatatatatatgactgtatat 632 ||||||||||||||||||||| Sbjct: 104955 tatatatatatgactgtatat 104935
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 233 cgaggcggaggccgcgaagacggtg 257 ||||||||||||||||||| ||||| Sbjct: 113362 cgaggcggaggccgcgaaggcggtg 113338
>emb|AL646020.15| Mouse DNA sequence from clone RP23-74L9 on chromosome 11 Contains the gene for a novel histone H2A family member, a ribosomal protein L36a (Rpl36a) pseudogene, a SMT3 (supressor of mif two, 3) homolog (S. cerevisiae) (Smt3h) pseudogene, a ribosomal protein S15A (Rps15a) pseudogene, the Purb gene for purine rich element binding protein B, a novel gene and two CpG islands, complete sequence Length = 73838 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 ccgggaggcggcgccggcggc 187 ||||||||||||||||||||| Sbjct: 52048 ccgggaggcggcgccggcggc 52028
>gb|AC012301.5|AC012301 Homo sapiens chromosome 18, clone RP11-383D22, complete sequence Length = 211466 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 485 aaaagaaaagatgaataaatt 505 ||||||||||||||||||||| Sbjct: 17392 aaaagaaaagatgaataaatt 17372
>emb|AJ276171.1|HSA276171 Homo sapiens mRNA for ASPIC (acidic secreted protein in cartilage) (ASPIC1 gene) Length = 2681 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 ggcggcgccggcggcagaggc 193 ||||||||||||||||||||| Sbjct: 75 ggcggcgccggcggcagaggc 95
>emb|AJ007044.1|OCU7044 Oryctolagus Cuniculus sod gene Length = 8778 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 169 gggaggcggcgccggcggcagaggc 193 ||||||||||| ||||||||||||| Sbjct: 1700 gggaggcggcggcggcggcagaggc 1724
>gb|AC119939.14| Mus musculus chromosome 5, clone RP24-267A23, complete sequence Length = 180700 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 269 gaggaggaggaggaacagcag 289 ||||||||||||||||||||| Sbjct: 155543 gaggaggaggaggaacagcag 155523
>gb|AC007809.8|AC007809 Drosophila melanogaster, chromosome 3R, region 88C-88C, BAC clone BACR45M03, complete sequence Length = 183439 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 269 gaggaggaggaggaacagcag 289 ||||||||||||||||||||| Sbjct: 107541 gaggaggaggaggaacagcag 107521
>gb|AC153556.5| Mus musculus 10 BAC RP23-395M5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184751 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 gaggaggaggaggaacagcag 289 ||||||||||||||||||||| Sbjct: 63171 gaggaggaggaggaacagcag 63191
>gb|AC008403.8| Homo sapiens chromosome 19 clone CTC-273B12, complete sequence Length = 190076 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 caggagaggaggaggaggaac 284 ||||||||||||||||||||| Sbjct: 85700 caggagaggaggaggaggaac 85680
>gb|BC043393.1| Homo sapiens YEATS domain containing 2, mRNA (cDNA clone IMAGE:5498791) Length = 3918 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 gaggaggaggaggaacagcag 289 ||||||||||||||||||||| Sbjct: 617 gaggaggaggaggaacagcag 637
>gb|AC068769.19| Homo sapiens 3 BAC RP11-14I2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191246 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 269 gaggaggaggaggaacagcag 289 ||||||||||||||||||||| Sbjct: 17635 gaggaggaggaggaacagcag 17615
>gb|AC011739.7| Homo sapiens BAC clone RP11-68H19 from 2, complete sequence Length = 171811 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 543 acatacttttttgtaattctt 563 ||||||||||||||||||||| Sbjct: 56328 acatacttttttgtaattctt 56308
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 atcacatacttttttgtaatt 560 ||||||||||||||||||||| Sbjct: 3017137 atcacatacttttttgtaatt 3017157
>gb|AC119917.10| Mus musculus chromosome 8, clone RP24-247M18, complete sequence Length = 174845 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 607 gtatgtatatatatatgactg 627 ||||||||||||||||||||| Sbjct: 83544 gtatgtatatatatatgactg 83524
>gb|AC099722.7| Mus musculus chromosome 3, clone RP23-282E13, complete sequence Length = 233425 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 612 tatatatatatgactgtatat 632 ||||||||||||||||||||| Sbjct: 81385 tatatatatatgactgtatat 81405
>ref|XM_312230.2| Anopheles gambiae str. PEST ENSANGP00000010757 (ENSANGG00000008268), partial mRNA Length = 6909 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 agaggaggaggaggaacagca 288 ||||||||||||||||||||| Sbjct: 4275 agaggaggaggaggaacagca 4295
>gb|AC155931.2| Mus musculus BAC clone RP23-289D4 from 9, complete sequence Length = 189845 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 ggagaggaggaggaggaacag 286 ||||||||||||||||||||| Sbjct: 945 ggagaggaggaggaggaacag 925
>dbj|AP003558.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-693A6, complete sequence Length = 182976 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 612 tatatatatatgactgtatat 632 ||||||||||||||||||||| Sbjct: 182439 tatatatatatgactgtatat 182459
>dbj|AP002378.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-351D3, complete sequence Length = 177432 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 612 tatatatatatgactgtatat 632 ||||||||||||||||||||| Sbjct: 41105 tatatatatatgactgtatat 41125
>gb|AC133197.3| Mus musculus BAC clone RP23-228E15 from 8, complete sequence Length = 197899 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 266 ggagaggaggaggaggaacagcagc 290 ||||||||||||||||| ||||||| Sbjct: 69052 ggagaggaggaggaggagcagcagc 69076
>gb|AC122433.5| Mus musculus BAC clone RP24-194G3 from chromosome 1, complete sequence Length = 170341 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 agaggaggaggaggaacagca 288 ||||||||||||||||||||| Sbjct: 35210 agaggaggaggaggaacagca 35190
>ref|NM_011221.1| Mus musculus purine rich element binding protein B (Purb), mRNA gb|AF017630.1|AF017630 Mus musculus vascular actin single-stranded DNA-binding factor 2 p44 component (PurB beta) mRNA, complete cds Length = 1151 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 ccgggaggcggcgccggcggc 187 ||||||||||||||||||||| Sbjct: 680 ccgggaggcggcgccggcggc 700
>gb|AF098788.1|AF098788 Gallus gallus nuclear calmodulin-binding protein (URP) mRNA, partial cds Length = 2404 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 ggaggcggcgccggcggcaga 190 ||||||||||||||||||||| Sbjct: 480 ggaggcggcgccggcggcaga 500
>emb|CT030730.7| Mouse DNA sequence from clone RP24-252L17 on chromosome 9, complete sequence Length = 151456 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 ggagaggaggaggaggaacag 286 ||||||||||||||||||||| Sbjct: 94251 ggagaggaggaggaggaacag 94231
>gb|AC132480.5| Mus musculus BAC clone RP23-11I14 from 6, complete sequence Length = 230313 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 604 gtagtatgtatatatatatga 624 ||||||||||||||||||||| Sbjct: 68423 gtagtatgtatatatatatga 68443
>emb|AJ132597.1|DME132597 Drosophila melanogaster H4r gene,3'-flanking region, 20000 BP Length = 20000 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 269 gaggaggaggaggaacagcag 289 ||||||||||||||||||||| Sbjct: 3874 gaggaggaggaggaacagcag 3854
>ref|NM_018023.3| Homo sapiens YEATS domain containing 2 (YEATS2), mRNA dbj|AB033023.1| Homo sapiens mRNA for KIAA1197 protein, partial cds Length = 6501 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 gaggaggaggaggaacagcag 289 ||||||||||||||||||||| Sbjct: 2666 gaggaggaggaggaacagcag 2686 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 137,905,388 Number of extensions: 18560716 Number of successful extensions: 717497 Number of sequences better than 10.0: 146 Number of HSP's gapped: 717497 Number of HSP's successfully gapped: 152 Length of query: 678 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 656 Effective length of database: 18,508,616,841 Effective search space: 12141652647696 Effective search space used: 12141652647696 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
