ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf88g16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK073296:Os07g0442900 149 3e-36
2AK060356:Os01g0363300 47 2e-05
3AK059622:Os01g0363300 47 2e-05
4AK073789:Os12g0610800 43 3e-04
5AK104184:Os06g0656300 33 0.28
6AK060127:Os06g0656300 33 0.28
7AK060123:Os06g0656300 33 0.28
8Os04g0460400:Os04g0460400 33 0.36
9Os04g0376400:Os04g0376400 30 2.3
10AK109803:Os04g0433000 30 2.3
11AK071505:Os09g0108400 30 2.3
12Os01g0162800:Os01g0162800 30 3.0
13Os01g0170300:Os01g0170300 29 4.0
14AY644643:Os07g0655800 29 5.2
15AK119941:Os02g0177700 29 5.2
16AK106901:Os12g0136300 29 5.2
17AK063534:Os09g0521900 29 5.2
18Os12g0590900:Os12g0590900 28 8.9
19Os05g0388400:Os05g0388400 28 8.9
20Os03g0351300:Os03g0351300 28 8.9
21Os02g0536000:Os02g0536000 28 8.9
22AK069537:Os01g0201200 28 8.9
23AK062426:Os01g0237000 28 8.9

>AK073296:Os07g0442900 |
          Length = 207
 Score =  149 bits (375), Expect = 3e-36
 Identities = 82/156 (52%), Positives = 92/156 (58%), Gaps = 1/156 (0%)
 Frame = +1

Query: 121 GNTAPSSPAKLRGVDLALRVLLFAVSLSGLVVMVTAKQTEIVPLVLTPP-FRFGPVPAQF 297
           G     +PAK  G +LALR LLFAVSLS LVV+VTAKQT +VP V+ PP F   PVPA++
Sbjct: 26  GRYGGPAPAKCSGANLALRALLFAVSLSALVVLVTAKQTVMVPFVIRPPQFILAPVPAKY 85

Query: 298 KDSPALIYLLVALCMXXXXXXXXXXXXXXXXXXXXXXXKGLFILILFDVVYAGIMXXXXX 477
             SPALIYLL ALC                        K LF LIL DV YA +M     
Sbjct: 86  THSPALIYLLAALCATCFYSLITAISSVRLLSSSACSAKTLFYLILLDVFYAAVMASATG 145

Query: 478 XXXXXXXXXLKGNSHTRWNKICNIYDKFCRHIGSAT 585
                    LKGNSHTRWNKICN+Y KFCRHIGS+T
Sbjct: 146 TAGAVAWVGLKGNSHTRWNKICNVYGKFCRHIGSST 181



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>AK060356:Os01g0363300 |
          Length = 215

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 4/143 (2%)
 Frame = +1

Query: 166 LALRVLLFAVSLSGLVVMVTAKQTEIVPLV----LTPPFRFGPVPAQFKDSPALIYLLVA 333
           + LRV +   +L+  VVM   +Q+  V +     L PP R  PV A++  S A +Y +VA
Sbjct: 53  VVLRVFVLLGTLASAVVMAADRQSTTVQIAAGEELAPPLRV-PVTAKWTYSSAFVYFVVA 111

Query: 334 LCMXXXXXXXXXXXXXXXXXXXXXXXKGLFILILFDVVYAGIMXXXXXXXXXXXXXXLKG 513
             M                         +  +++ D+V   ++               +G
Sbjct: 112 NAMVFAFSAAALAAVRRR--------SAVVPVMVGDLVAMALLFSAVGAAAQFGLLGERG 163

Query: 514 NSHTRWNKICNIYDKFCRHIGSA 582
           N+H RW K+C++Y  FC    +A
Sbjct: 164 NAHVRWAKVCDVYGPFCERAMAA 186



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>AK059622:Os01g0363300 |
          Length = 215

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 4/143 (2%)
 Frame = +1

Query: 166 LALRVLLFAVSLSGLVVMVTAKQTEIVPLV----LTPPFRFGPVPAQFKDSPALIYLLVA 333
           + LRV +   +L+  VVM   +Q+  V +     L PP R  PV A++  S A +Y +VA
Sbjct: 53  VVLRVFVLLGTLASAVVMAADRQSTTVQIAAGEELAPPLRV-PVTAKWTYSSAFVYFVVA 111

Query: 334 LCMXXXXXXXXXXXXXXXXXXXXXXXKGLFILILFDVVYAGIMXXXXXXXXXXXXXXLKG 513
             M                         +  +++ D+V   ++               +G
Sbjct: 112 NAMVFAFSAAALAAVRRR--------SAVVPVMVGDLVAMALLFSAVGAAAQFGLLGERG 163

Query: 514 NSHTRWNKICNIYDKFCRHIGSA 582
           N+H RW K+C++Y  FC    +A
Sbjct: 164 NAHVRWAKVCDVYGPFCERAMAA 186



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>AK073789:Os12g0610800 |
          Length = 195

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 36/147 (24%), Positives = 56/147 (38%), Gaps = 2/147 (1%)
 Frame = +1

Query: 148 KLRGVDLALRVLLFAVSLSGLVVMVTAKQ--TEIVPLVLTPPFRFGPVPAQFKDSPALIY 321
           KL  +   +R  +F  +    V+M   KQ  T +V +V T P       A+FKD+PA ++
Sbjct: 24  KLITLQPVVRACVFLATAVAAVIMGLNKQSYTTVVAIVGTRPVT-QTFTAKFKDTPAFVF 82

Query: 322 LLVALCMXXXXXXXXXXXXXXXXXXXXXXXKGLFILILFDVVYAGIMXXXXXXXXXXXXX 501
            ++A  +                            + L D+V   ++             
Sbjct: 83  FVIANAIASGYNLMVLVTRRILQRRAQSLS-----VHLLDMVILTLLATGSATAASMAQL 137

Query: 502 XLKGNSHTRWNKICNIYDKFCRHIGSA 582
              GN H RWN IC+ +  FC H G A
Sbjct: 138 GKNGNLHARWNPICDKFGSFCNHGGIA 164



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>AK104184:Os06g0656300 |
          Length = 194

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 505 LKGNSHTRWNKICNIYDKFCRHI-GSATC 588
           L G    +W K+CNIY +FC  + GS  C
Sbjct: 130 LYGTHALQWTKLCNIYTRFCEQVAGSLVC 158



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>AK060127:Os06g0656300 |
          Length = 194

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 505 LKGNSHTRWNKICNIYDKFCRHI-GSATC 588
           L G    +W K+CNIY +FC  + GS  C
Sbjct: 130 LYGTHALQWTKLCNIYTRFCEQVAGSLVC 158



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>AK060123:Os06g0656300 |
          Length = 194

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 505 LKGNSHTRWNKICNIYDKFCRHI-GSATC 588
           L G    +W K+CNIY +FC  + GS  C
Sbjct: 130 LYGTHALQWTKLCNIYTRFCEQVAGSLVC 158



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>Os04g0460400:Os04g0460400 |
          Length = 193

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 29/143 (20%), Positives = 46/143 (32%), Gaps = 2/143 (1%)
 Frame = +1

Query: 160 VDLALRVLLFAVSLSGLVVMVTAKQTEIVPLVLTPPF--RFGPVPAQFKDSPALIYLLVA 333
           VD  LR +    ++   + M T  +T         PF  +F    A++ D P+  + + A
Sbjct: 34  VDTFLRFIAIIGTIGSAIAMGTTNETL--------PFFTQFIQFEAKYSDLPSFTFFVAA 85

Query: 334 LCMXXXXXXXXXXXXXXXXXXXXXXXKGLFILILFDVVYAGIMXXXXXXXXXXXXXXLKG 513
             +                         LF L+ FD     ++               KG
Sbjct: 86  NAVVCTYLVLSIPLSIVHILRPRARYSRLF-LVFFDTAMLALLTAGASAAAAIVYLAHKG 144

Query: 514 NSHTRWNKICNIYDKFCRHIGSA 582
           N    W  IC  +D FC  I  +
Sbjct: 145 NVRANWFSICQQFDSFCERISGS 167



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>Os04g0376400:Os04g0376400 |
          Length = 479

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +2

Query: 365 RPPARSSPCQARHPVPRGSSSSFFLMSFTRVSWR 466
           RPPA  SP     P+   S++S    SF+R+SWR
Sbjct: 428 RPPALQSPAPTTAPMSSSSTTS----SFSRLSWR 457



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>AK109803:Os04g0433000 |
          Length = 344

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 34/131 (25%), Positives = 43/131 (32%), Gaps = 5/131 (3%)
 Frame = -3

Query: 504 PHPGHGPRRAGCRRHDTR-----VNDIKKNEDEEPLGTGCRA*HGLDRAGGREKAIQARH 340
           P P   PR  G RR D R     V   +        G  CRA      AG  ++    R 
Sbjct: 175 PAPRRPPRHRGGRRRDVRGQREDVRGTQAGARGPVSGVPCRAFWAKQGAGCHDR----RR 230

Query: 339 AQSHKKINERRRVFELGGDRPESERRRQDQGHDLRLLGGDHHDEP*QRDGEQQHPQGQVD 160
             SH+  + R     L G  P    R      D     G   D P    G +Q   G+ +
Sbjct: 231 GGSHRHTHRRHGGAGLRGSAPLHVHRLAAGARDDERRRGRGGDAPGPGRGGEQVQDGEAE 290

Query: 159 AAELRRRGRCR 127
           A    +  R R
Sbjct: 291 AGVRAQTVRVR 301



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>AK071505:Os09g0108400 |
          Length = 345

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 19/83 (22%), Positives = 34/83 (40%)
 Frame = +1

Query: 4   RRSIHQLRAKTQKPHTPPAIAYRQARAPTEGMAGTVDDSGNTAPSSPAKLRGVDLALRVL 183
           RRSIH LR +   PH    + +  A +     A  +  + +++    A  R + L     
Sbjct: 53  RRSIHDLRLRVPPPHVAQRLPHLHAHSLASSAALALQLNAHSSTKEQALQREITLQEENA 112

Query: 184 LFAVSLSGLVVMVTAKQTEIVPL 252
            +  ++S     +  KQ E+  L
Sbjct: 113 AYEKAISNCRQKIQEKQMEVTLL 135



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>Os01g0162800:Os01g0162800 |
          Length = 1252

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 16/67 (23%), Positives = 29/67 (43%)
 Frame = -1

Query: 278  PNLNGGVRTRGTISVCLAVTITTSPDSETANSNTRRARSTPRSFAGEDGAVLPLSSTVPA 99
            P+ + G+R     ++  ++    S D E  +  ++  R   R   G    +LP S+T P 
Sbjct: 1049 PSTSSGMRLEACSAMARSLAAAASSDRERRHGASQEQRERRRGRRGGPPLLLPASTTAPL 1108

Query: 98   MPSVGAR 78
              S+  R
Sbjct: 1109 SSSLSRR 1115



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>Os01g0170300:Os01g0170300 |
          Length = 1117

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
 Frame = +1

Query: 124 NTAPSSPAKLRGVDL-----ALRVLLFAVSLSGLVV--MVTAKQTEIVPLVLTPPFRFGP 282
           N A +SP +  GV          + L  V L G V   +  A  T +  LVL      GP
Sbjct: 60  NPADASPCRWTGVRCNANGRVTELSLQQVDLLGGVPDNLSAAMGTTLERLVLAGANLSGP 119

Query: 283 VPAQFKDSPALIYL 324
           +PAQ  D PAL +L
Sbjct: 120 IPAQLGDLPALTHL 133



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>AY644643:Os07g0655800 |
          Length = 299

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 3/99 (3%)
 Frame = -3

Query: 495 GHGPRRAGCRRHDTRVNDIKKNEDEEPL---GTGCRA*HGLDRAGGREKAIQARHAQSHK 325
           G G RR+   R      D + + D++ L   GTG  A  G    G     ++ RH +  +
Sbjct: 121 GDGDRRSN--RKSMVTVDAEVDTDDDALRVNGTGAGAGAGNHTRGSGGVVVRRRHRRRRR 178

Query: 324 KINERRRVFELGGDRPESERRRQDQGHDLRLLGGDHHDE 208
               RRR     G R   E    D G D    GGD  D+
Sbjct: 179 SRRRRRRHRHHPGVR---EGEDDDSGGDDEDHGGDDDDD 214



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>AK119941:Os02g0177700 |
          Length = 195

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 505 LKGNSHTRWNKICNIYDKFC 564
           L G    +W+K+CNIY +FC
Sbjct: 124 LIGVEALQWSKLCNIYTRFC 143



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>AK106901:Os12g0136300 |
          Length = 541

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
 Frame = -3

Query: 354 IQARHAQSHKKINERRRVFELGGDRPESERRRQDQGHDLRLLGGDHHDEP*QRDGEQQHP 175
           +  +H      +  RRRV  +   R E ER  + +  + R +G  HH       G  +H 
Sbjct: 58  VPLQHRPQVAPLLRRRRVQHVEQRREEEERLPEPRREEGRAVGAVHH-------GLDEHR 110

Query: 174 QGQVDAAELRRRGRCRV---TAVIHRAGHA 94
           +  V  A   R  R RV    A++H+   A
Sbjct: 111 RAHVADAAEDRVPRARVVEHAALVHQGAQA 140



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>AK063534:Os09g0521900 |
          Length = 127

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
 Frame = -1

Query: 311 AGESLNW-----AGTGPNLNGGVRTRGTISVCLAVTITTSPDSETA--NSNTRRARSTPR 153
           AGE   W     +GT  +   G R RGT +   + + + S  S TA  +   RR R++P 
Sbjct: 35  AGEEERWGWGEASGTCSSRTRGTRARGTSAAAASPSTSPSGSSPTAPPSGRARRTRASPI 94

Query: 152 S 150
           S
Sbjct: 95  S 95



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>Os12g0590900:Os12g0590900 |
          Length = 908

 Score = 28.1 bits (61), Expect = 8.9
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = -3

Query: 291 GGDRPESERRRQDQGHDLRLLGGDHHDEP*QRDGEQQHPQGQVDAAE 151
           GGD  ES  RR+ +G + RLLGG        RDG  +   G++   E
Sbjct: 626 GGDHKESAIRRETEG-EFRLLGG--------RDGNSRFAGGRLFGVE 663



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>Os05g0388400:Os05g0388400 |
          Length = 571

 Score = 28.1 bits (61), Expect = 8.9
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 10  SIHQLRAKTQKPHTPPAIAYRQARAPTEGMAGT 108
           SIH LRA    P  PP +A  +A AP +    T
Sbjct: 24  SIHPLRAFDPSPTAPPILADARAAAPAQRRRST 56



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>Os03g0351300:Os03g0351300 |
          Length = 696

 Score = 28.1 bits (61), Expect = 8.9
 Identities = 19/63 (30%), Positives = 23/63 (36%)
 Frame = -1

Query: 293 WAGTGPNLNGGVRTRGTISVCLAVTITTSPDSETANSNTRRARSTPRSFAGEDGAVLPLS 114
           W G GP L+ G R R           TT P+      NTR  R+  +    E       S
Sbjct: 123 WCGVGPTLSFGGRGR-----------TTKPNPNEREKNTRTPRANAKEREAEKKGAKSRS 171

Query: 113 STV 105
           S V
Sbjct: 172 SDV 174



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>Os02g0536000:Os02g0536000 |
          Length = 122

 Score = 28.1 bits (61), Expect = 8.9
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +2

Query: 134 RPLRRSSAASTWPCG 178
           RP RR S A+ WPCG
Sbjct: 108 RPRRRDSCAALWPCG 122



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>AK069537:Os01g0201200 |
          Length = 563

 Score = 28.1 bits (61), Expect = 8.9
 Identities = 20/68 (29%), Positives = 31/68 (45%)
 Frame = +1

Query: 7   RSIHQLRAKTQKPHTPPAIAYRQARAPTEGMAGTVDDSGNTAPSSPAKLRGVDLALRVLL 186
           R  H+LR+K+  P+  P+  +R+ARA           S     S P K RG + ++    
Sbjct: 140 RPQHKLRSKSPLPNVAPSDVFREARA-----------SSRRFTSPPPKRRGSERSIYGKS 188

Query: 187 FAVSLSGL 210
           F   LS +
Sbjct: 189 FDRQLSDM 196



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>AK062426:Os01g0237000 |
          Length = 162

 Score = 28.1 bits (61), Expect = 8.9
 Identities = 15/53 (28%), Positives = 21/53 (39%)
 Frame = +1

Query: 424 ILILFDVVYAGIMXXXXXXXXXXXXXXLKGNSHTRWNKICNIYDKFCRHIGSA 582
           +L++ DVV   ++                GNSH  W  IC     FC  + SA
Sbjct: 84  LLLMADVVLGMVLAGAFAAAGAMAELGKNGNSHAGWIAICVQVPLFCDRVRSA 136


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 23,720,919
Number of extensions: 532430
Number of successful extensions: 2057
Number of sequences better than 10.0: 23
Number of HSP's gapped: 2045
Number of HSP's successfully gapped: 24
Length of query: 302
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 202
Effective length of database: 11,395,755
Effective search space: 2301942510
Effective search space used: 2301942510
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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