ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf88g16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P01042:KNG1_HUMAN Kininogen-1 precursor - Homo sapiens (Human) 36 0.19
2Q42404:RU17_ARATH U1 small nuclear ribonucleoprotein 70 kDa - Ar... 35 0.32
3O74476:IMB3_SCHPO Importin beta-3 subunit - Schizosaccharomyces ... 34 0.71
4Q09830:YAD4_SCHPO Uncharacterized protein C4G8.04 - Schizosaccha... 33 1.6
5Q6JAN0:GPR98_DANRE G-protein coupled receptor 98 precursor - Dan... 33 1.6
6Q8H0U8:RH42_ARATH DEAD-box ATP-dependent RNA helicase 42 - Arabi... 31 6.0
7A2T806:PQBP1_PONPY Polyglutamine-binding protein 1 - Pongo pygma... 31 6.0
8O60828:PQBP1_HUMAN Polyglutamine-binding protein 1 - Homo sapien... 31 7.8
9A1YFA7:PQBP1_GORGO Polyglutamine-binding protein 1 - Gorilla gor... 31 7.8
10Q86UU1:PHLB1_HUMAN Pleckstrin homology-like domain family B memb... 31 7.8
11O82632:GAT11_ARATH GATA transcription factor 11 - Arabidopsis th... 31 7.8
12P04480:CEA_CITFR Colicin-A - Citrobacter freundii 31 7.8
13Q8BLQ9:CADM2_MOUSE Cell adhesion molecule 2 precursor - Mus musc... 31 7.8

>P01042:KNG1_HUMAN Kininogen-1 precursor - Homo sapiens (Human)|
          Length = 644
 Score = 36.2 bits (82), Expect = 0.19
 Identities = 38/149 (25%), Positives = 56/149 (37%)
 Frame = -3

Query: 498 PGHGPRRAGCRRHDTRVNDIKKNEDEEPLGTGCRA*HGLDRAGGREKAIQARHAQSHKKI 319
           PG  P R+      +R+ +IK+     P  T        +R  G+E+    RH   H   
Sbjct: 383 PGFSPFRS------SRIGEIKEETTVSPPHTSMAPAQDEERDSGKEQGHTRRHDWGH--- 433

Query: 318 NERRRVFELGGDRPESERRRQDQGHDLRLLGGDHHDEP*QRDGEQQHPQGQVDAAELRRR 139
            E++R   LG       +  +DQGH  +   G  H        EQQH  G     +L   
Sbjct: 434 -EKQRKHNLG----HGHKHERDQGHGHQRGHGLGHGH------EQQHGLGHGHKFKLD-- 480

Query: 138 GRCRVTAVIHRAGHALCRGARLSIGYSRG 52
                  + H+ GH L  G +   G+  G
Sbjct: 481 -----DDLEHQGGHVLDHGHKHKHGHGHG 504



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>Q42404:RU17_ARATH U1 small nuclear ribonucleoprotein 70 kDa - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 427

 Score = 35.4 bits (80), Expect = 0.32
 Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 21/110 (19%)
 Frame = -3

Query: 387 GLDRAGGREKAI-----QARHAQSHK-------------KINERRRVFELGGDRPES--- 271
           G  R GG E+ +     Q R +QS +             K  ER R  EL  ++P     
Sbjct: 232 GTSRVGGGEEIVGEQQPQGRTSQSEEPSRPREEREKSREKGKERERSRELSHEQPRERSR 291

Query: 270 ERRRQDQGHDLRLLGGDHHDEP*QRDGEQQHPQGQVDAAELRRRGRCRVT 121
           +R R+D+ H  R  GG   D   +RD ++   +G  D  + R RGR R +
Sbjct: 292 DRPREDKHHRDRDQGGRDRDRDSRRDRDRTRDRGDRDRRD-RDRGRDRTS 340



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>O74476:IMB3_SCHPO Importin beta-3 subunit - Schizosaccharomyces pombe (Fission yeast)|
          Length = 1095

 Score = 34.3 bits (77), Expect = 0.71
 Identities = 19/44 (43%), Positives = 23/44 (52%)
 Frame = -1

Query: 209 SPDSETANSNTRRARSTPRSFAGEDGAVLPLSSTVPAMPSVGAR 78
           SPD     S  R   S PR  +G+D AV PL +T  A PS+  R
Sbjct: 150 SPDESFRESVFRTITSLPRLLSGQDSAVTPLFTTGLADPSIRVR 193



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>Q09830:YAD4_SCHPO Uncharacterized protein C4G8.04 - Schizosaccharomyces pombe|
           (Fission yeast)
          Length = 772

 Score = 33.1 bits (74), Expect = 1.6
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = -1

Query: 221 TITTSPDSETANSNTRRARSTPRSFAGEDGAVLPLSSTVPAMPSVGA 81
           T + S  + ++N N R + S   S +  +   L LSST P+MPS+G+
Sbjct: 303 TYSVSTKNSSSNKNLRSSLSKLLSTSNLNNKPLSLSSTAPSMPSIGS 349



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>Q6JAN0:GPR98_DANRE G-protein coupled receptor 98 precursor - Danio rerio (Zebrafish)|
           (Brachydanio rerio)
          Length = 6199

 Score = 33.1 bits (74), Expect = 1.6
 Identities = 26/76 (34%), Positives = 35/76 (46%)
 Frame = -1

Query: 269 NGGVRTRGTISVCLAVTITTSPDSETANSNTRRARSTPRSFAGEDGAVLPLSSTVPAMPS 90
           NGG  T G +SV   +T   S D    +++   A  T R   G+  AVLPL+ T  ++P 
Sbjct: 414 NGG--THGAVSVQWNIT-RNSTDRSPVSADLNPAAGTLRFSEGQMSAVLPLNITQDSLPE 470

Query: 89  VGARACL*AIAGGVCG 42
                 L  I G V G
Sbjct: 471 EAEAFLLKLIPGSVQG 486



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>Q8H0U8:RH42_ARATH DEAD-box ATP-dependent RNA helicase 42 - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 1166

 Score = 31.2 bits (69), Expect = 6.0
 Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
 Frame = -3

Query: 483 RRAGCRRHDT-RVNDIKKNEDEEPLGTGCRA*HGLDRAGGREKAIQARHAQSHKKINERR 307
           +  G R H+  R  D K++ + E      R     +R   RE+  + R  +  +++ ER 
Sbjct: 119 KERGHREHERDRGKDRKRDREREE-----RKDKEREREKDRERREREREEREKERVKERE 173

Query: 306 RVFELGGDRPESER------RRQDQGHDLRLLGGDHHDEP*QRDGEQQHPQG 169
           R     G+R   ER      RR  +    R +G +  D+  +RD +++  +G
Sbjct: 174 RREREDGERDRREREKERGSRRNRERERSREVGNEESDDDVKRDLKRRRKEG 225



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>A2T806:PQBP1_PONPY Polyglutamine-binding protein 1 - Pongo pygmaeus (Orangutan)|
          Length = 265

 Score = 31.2 bits (69), Expect = 6.0
 Identities = 17/75 (22%), Positives = 35/75 (46%)
 Frame = -3

Query: 360 KAIQARHAQSHKKINERRRVFELGGDRPESERRRQDQGHDLRLLGGDHHDEP*QRDGEQQ 181
           K +++ +A + +K++      + G D+ +    + D+GHD    G D  D   +R  ++ 
Sbjct: 90  KKLRSSNADAEEKLDRSHDKSDRGHDKSDRSHEKPDRGHDKSDRGHDKSDRDRERGYDKV 149

Query: 180 HPQGQVDAAELRRRG 136
             + + D    R RG
Sbjct: 150 DRERERDRERDRDRG 164



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>O60828:PQBP1_HUMAN Polyglutamine-binding protein 1 - Homo sapiens (Human)|
          Length = 265

 Score = 30.8 bits (68), Expect = 7.8
 Identities = 17/75 (22%), Positives = 35/75 (46%)
 Frame = -3

Query: 360 KAIQARHAQSHKKINERRRVFELGGDRPESERRRQDQGHDLRLLGGDHHDEP*QRDGEQQ 181
           K +++ +A + +K++      + G D+ +    + D+GHD    G D  D   +R  ++ 
Sbjct: 90  KKLRSSNADAEEKLDRSHDKSDRGHDKSDRSHEKLDRGHDKSDRGHDKSDRDRERGYDKV 149

Query: 180 HPQGQVDAAELRRRG 136
             + + D    R RG
Sbjct: 150 DRERERDRERDRDRG 164



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>A1YFA7:PQBP1_GORGO Polyglutamine-binding protein 1 - Gorilla gorilla gorilla (Lowland|
           gorilla)
          Length = 265

 Score = 30.8 bits (68), Expect = 7.8
 Identities = 17/75 (22%), Positives = 35/75 (46%)
 Frame = -3

Query: 360 KAIQARHAQSHKKINERRRVFELGGDRPESERRRQDQGHDLRLLGGDHHDEP*QRDGEQQ 181
           K +++ +A + +K++      + G D+ +    + D+GHD    G D  D   +R  ++ 
Sbjct: 90  KKLRSSNADAEEKLDRSHDKSDRGHDKSDRSHEKLDRGHDKSDRGHDKSDRDRERGYDKV 149

Query: 180 HPQGQVDAAELRRRG 136
             + + D    R RG
Sbjct: 150 DRERERDRERDRDRG 164



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>Q86UU1:PHLB1_HUMAN Pleckstrin homology-like domain family B member 1 - Homo sapiens|
            (Human)
          Length = 1377

 Score = 30.8 bits (68), Expect = 7.8
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 363  EKAIQARHAQSHKKINERRRVFELGGDRPESERRRQDQ 250
            EK ++  HA+ ++ +  R R  EL     E ERRR++Q
Sbjct: 1152 EKMLKEAHAEKNRLMESREREMELRRQALEEERRRREQ 1189



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>O82632:GAT11_ARATH GATA transcription factor 11 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 308

 Score = 30.8 bits (68), Expect = 7.8
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = -3

Query: 354 IQARHAQSHKKINERRRVFELGGDRPESERRRQDQGHDLRLLGGD 220
           + ARH+ SH+K+ E RR  E+  +   S+ R ++   D+R  G D
Sbjct: 246 VMARHSNSHRKVMELRRQKEMRDEHLLSQLRCENLLMDIRSNGED 290



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>P04480:CEA_CITFR Colicin-A - Citrobacter freundii|
          Length = 592

 Score = 30.8 bits (68), Expect = 7.8
 Identities = 21/65 (32%), Positives = 32/65 (49%)
 Frame = +1

Query: 58  AIAYRQARAPTEGMAGTVDDSGNTAPSSPAKLRGVDLALRVLLFAVSLSGLVVMVTAKQT 237
           A+A  +ARA   G +    D+G    ++ A +    L +  L  AVS +  V  +T KQ 
Sbjct: 203 ALAEEEARAIASGKSKAEFDAGKRVEAAQAAINTAQLNVNNLSGAVSAANQV--ITQKQA 260

Query: 238 EIVPL 252
           E+ PL
Sbjct: 261 EMTPL 265



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>Q8BLQ9:CADM2_MOUSE Cell adhesion molecule 2 precursor - Mus musculus (Mouse)|
          Length = 435

 Score = 30.8 bits (68), Expect = 7.8
 Identities = 19/38 (50%), Positives = 26/38 (68%)
 Frame = -1

Query: 245 TISVCLAVTITTSPDSETANSNTRRARSTPRSFAGEDG 132
           T  V  +VTITTSP S +A+S++RR    P S AG++G
Sbjct: 331 TAPVTTSVTITTSP-STSASSSSRR---DPNSLAGQNG 364


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 136,904,558
Number of extensions: 2803226
Number of successful extensions: 7982
Number of sequences better than 10.0: 13
Number of HSP's gapped: 7967
Number of HSP's successfully gapped: 13
Length of query: 302
Length of database: 100,686,439
Length adjustment: 113
Effective length of query: 189
Effective length of database: 69,691,104
Effective search space: 13171618656
Effective search space used: 13171618656
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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