>emb|CT834415.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA022C20, full
           insert sequence
          Length = 901
 Score =  232 bits (117), Expect = 2e-57
 Identities = 171/189 (90%)
 Strand = Plus / Plus

                                                                       
Query: 460 atggcgtcggcaaccggcacggcgggggccgtggcctgggtggggctgaaggggaactcg 519
           ||||||||||| ||||| || |||||||||||||| ||||||||||||||||||||||| 
Sbjct: 494 atggcgtcggcgaccgggacagcgggggccgtggcgtgggtggggctgaaggggaactcc 553

                                                                       
Query: 520 cacacgcggtggaacaagatctgcaacatctacgacaagttctgccgccacatcggcagc 579
           ||||| |||||||||||||| |||||| |||||| |||||||||||||||||||||||||
Sbjct: 554 cacacccggtggaacaagatatgcaacgtctacggcaagttctgccgccacatcggcagc 613

                                                                       
Query: 580 gccacctgcctcggcctcatcgcctccatcatcctcgttctcctcgtcgtcctcaacgcc 639
            |||||| ||||| |||||||||| ||||| | ||||| ||||||| | |||||||||||
Sbjct: 614 tccaccttcctcgccctcatcgccgccatcgttctcgtcctcctcgccttcctcaacgcc 673

                    
Query: 640 tactccctc 648
           |||||||||
Sbjct: 674 tactccctc 682



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                       
Query: 164 acctggccctgcgggtgttgctgttcgccgtctcgctgtcagggctcgtcgtgatggtca 223
           ||||||||||| ||| | |||| |||||||| |||||||| | |||||| ||| | ||||
Sbjct: 195 acctggccctgagggcgctgctcttcgccgtgtcgctgtccgcgctcgtggtgcttgtca 254

                          
Query: 224 ccgccaagcagacgg 238
           |||||||||||||||
Sbjct: 255 ccgccaagcagacgg 269

>ref|NM_001066061.1| Oryza sativa (japonica cultivar-group) Os07g0442900 (Os07g0442900)
           mRNA, complete cds
          Length = 946

 Score =  224 bits (113), Expect = 4e-55
 Identities = 170/189 (89%)
 Strand = Plus / Plus

                                                                       
Query: 460 atggcgtcggcaaccggcacggcgggggccgtggcctgggtggggctgaaggggaactcg 519
           ||||||||||| ||||| || |||||||||||||| |||||||| |||||||||||||| 
Sbjct: 489 atggcgtcggcgaccgggacagcgggggccgtggcgtgggtgggactgaaggggaactcc 548

                                                                       
Query: 520 cacacgcggtggaacaagatctgcaacatctacgacaagttctgccgccacatcggcagc 579
           ||||| |||||||||||||| |||||| |||||| |||||||||||||||||||||||||
Sbjct: 549 cacacccggtggaacaagatatgcaacgtctacggcaagttctgccgccacatcggcagc 608

                                                                       
Query: 580 gccacctgcctcggcctcatcgcctccatcatcctcgttctcctcgtcgtcctcaacgcc 639
            |||||| ||||| |||||||||| ||||| | ||||| ||||||| | |||||||||||
Sbjct: 609 tccaccttcctcgccctcatcgccgccatcgttctcgtcctcctcgccttcctcaacgcc 668

                    
Query: 640 tactccctc 648
           |||||||||
Sbjct: 669 tactccctc 677



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                       
Query: 164 acctggccctgcgggtgttgctgttcgccgtctcgctgtcagggctcgtcgtgatggtca 223
           ||||||||||| ||| | |||| |||||||| |||||||| | |||||| ||| | ||||
Sbjct: 190 acctggccctgagggcgctgctcttcgccgtgtcgctgtccgcgctcgtggtgcttgtca 249

                          
Query: 224 ccgccaagcagacgg 238
           |||||||||||||||
Sbjct: 250 ccgccaagcagacgg 264

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score =  224 bits (113), Expect = 4e-55
 Identities = 170/189 (89%)
 Strand = Plus / Plus

                                                                            
Query: 460      atggcgtcggcaaccggcacggcgggggccgtggcctgggtggggctgaaggggaactcg 519
                ||||||||||| ||||| || |||||||||||||| |||||||| |||||||||||||| 
Sbjct: 14936753 atggcgtcggcgaccgggacagcgggggccgtggcgtgggtgggactgaaggggaactcc 14936812

                                                                            
Query: 520      cacacgcggtggaacaagatctgcaacatctacgacaagttctgccgccacatcggcagc 579
                ||||| |||||||||||||| |||||| |||||| |||||||||||||||||||||||||
Sbjct: 14936813 cacacccggtggaacaagatatgcaacgtctacggcaagttctgccgccacatcggcagc 14936872

                                                                            
Query: 580      gccacctgcctcggcctcatcgcctccatcatcctcgttctcctcgtcgtcctcaacgcc 639
                 |||||| ||||| |||||||||| ||||| | ||||| ||||||| | |||||||||||
Sbjct: 14936873 tccaccttcctcgccctcatcgccgccatcgttctcgtcctcctcgccttcctcaacgcc 14936932

                         
Query: 640      tactccctc 648
                |||||||||
Sbjct: 14936933 tactccctc 14936941



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                            
Query: 164      acctggccctgcgggtgttgctgttcgccgtctcgctgtcagggctcgtcgtgatggtca 223
                ||||||||||| ||| | |||| |||||||| |||||||| | |||||| ||| | ||||
Sbjct: 14935484 acctggccctgagggcgctgctcttcgccgtgtcgctgtccgcgctcgtggtgcttgtca 14935543

                               
Query: 224      ccgccaagcagacgg 238
                |||||||||||||||
Sbjct: 14935544 ccgccaagcagacgg 14935558

>dbj|AP006159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1157F01
          Length = 181639

 Score =  224 bits (113), Expect = 4e-55
 Identities = 170/189 (89%)
 Strand = Plus / Plus

                                                                         
Query: 460   atggcgtcggcaaccggcacggcgggggccgtggcctgggtggggctgaaggggaactcg 519
             ||||||||||| ||||| || |||||||||||||| |||||||| |||||||||||||| 
Sbjct: 76923 atggcgtcggcgaccgggacagcgggggccgtggcgtgggtgggactgaaggggaactcc 76982

                                                                         
Query: 520   cacacgcggtggaacaagatctgcaacatctacgacaagttctgccgccacatcggcagc 579
             ||||| |||||||||||||| |||||| |||||| |||||||||||||||||||||||||
Sbjct: 76983 cacacccggtggaacaagatatgcaacgtctacggcaagttctgccgccacatcggcagc 77042

                                                                         
Query: 580   gccacctgcctcggcctcatcgcctccatcatcctcgttctcctcgtcgtcctcaacgcc 639
              |||||| ||||| |||||||||| ||||| | ||||| ||||||| | |||||||||||
Sbjct: 77043 tccaccttcctcgccctcatcgccgccatcgttctcgtcctcctcgccttcctcaacgcc 77102

                      
Query: 640   tactccctc 648
             |||||||||
Sbjct: 77103 tactccctc 77111



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                         
Query: 164   acctggccctgcgggtgttgctgttcgccgtctcgctgtcagggctcgtcgtgatggtca 223
             ||||||||||| ||| | |||| |||||||| |||||||| | |||||| ||| | ||||
Sbjct: 75654 acctggccctgagggcgctgctcttcgccgtgtcgctgtccgcgctcgtggtgcttgtca 75713

                            
Query: 224   ccgccaagcagacgg 238
             |||||||||||||||
Sbjct: 75714 ccgccaagcagacgg 75728

>dbj|AK073296.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029H14, full
           insert sequence
          Length = 948

 Score =  224 bits (113), Expect = 4e-55
 Identities = 170/189 (89%)
 Strand = Plus / Plus

                                                                       
Query: 460 atggcgtcggcaaccggcacggcgggggccgtggcctgggtggggctgaaggggaactcg 519
           ||||||||||| ||||| || |||||||||||||| |||||||| |||||||||||||| 
Sbjct: 490 atggcgtcggcgaccgggacagcgggggccgtggcgtgggtgggactgaaggggaactcc 549

                                                                       
Query: 520 cacacgcggtggaacaagatctgcaacatctacgacaagttctgccgccacatcggcagc 579
           ||||| |||||||||||||| |||||| |||||| |||||||||||||||||||||||||
Sbjct: 550 cacacccggtggaacaagatatgcaacgtctacggcaagttctgccgccacatcggcagc 609

                                                                       
Query: 580 gccacctgcctcggcctcatcgcctccatcatcctcgttctcctcgtcgtcctcaacgcc 639
            |||||| ||||| |||||||||| ||||| | ||||| ||||||| | |||||||||||
Sbjct: 610 tccaccttcctcgccctcatcgccgccatcgttctcgtcctcctcgccttcctcaacgcc 669

                    
Query: 640 tactccctc 648
           |||||||||
Sbjct: 670 tactccctc 678



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                       
Query: 164 acctggccctgcgggtgttgctgttcgccgtctcgctgtcagggctcgtcgtgatggtca 223
           ||||||||||| ||| | |||| |||||||| |||||||| | |||||| ||| | ||||
Sbjct: 191 acctggccctgagggcgctgctcttcgccgtgtcgctgtccgcgctcgtggtgcttgtca 250

                          
Query: 224 ccgccaagcagacgg 238
           |||||||||||||||
Sbjct: 251 ccgccaagcagacgg 265

>emb|BX908789.1| Neurospora crassa DNA linkage group VII BAC clone B13D24
          Length = 107482

 Score = 48.1 bits (24), Expect = 0.055
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 679   tccagccccactccctcctccggc 702
             ||||||||||||||||||||||||
Sbjct: 57154 tccagccccactccctcctccggc 57177

>ref|XM_954816.1| Neurospora crassa OR74A FREQUENCY CLOCK PROTEIN (NCU02265.1) partial
            mRNA
          Length = 2970

 Score = 48.1 bits (24), Expect = 0.055
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 679  tccagccccactccctcctccggc 702
            ||||||||||||||||||||||||
Sbjct: 2535 tccagccccactccctcctccggc 2558

>gb|U17073.1|NCU17073 Neurospora crassa frequency (frq) mRNA, complete cds
          Length = 4631

 Score = 48.1 bits (24), Expect = 0.055
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 679  tccagccccactccctcctccggc 702
            ||||||||||||||||||||||||
Sbjct: 3954 tccagccccactccctcctccggc 3977

>ref|NM_111514.2| Arabidopsis thaliana unknown protein (AT3G06390) mRNA, complete cds
          Length = 853

 Score = 44.1 bits (22), Expect = 0.87
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 527 ggtggaacaagatctgcaacatctacgacaagtt 560
           |||||||||||||||| ||  |||||||||||||
Sbjct: 542 ggtggaacaagatctgtaatgtctacgacaagtt 575

>gb|AC011623.5|ATAC011623 Arabidopsis thaliana chromosome III BAC F24P17 genomic sequence,
             complete sequence
          Length = 86022

 Score = 44.1 bits (22), Expect = 0.87
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 527   ggtggaacaagatctgcaacatctacgacaagtt 560
             |||||||||||||||| ||  |||||||||||||
Sbjct: 53253 ggtggaacaagatctgtaatgtctacgacaagtt 53286

>gb|AC010327.8| Homo sapiens chromosome 19 clone CTD-2587H24, complete sequence
          Length = 146664

 Score = 44.1 bits (22), Expect = 0.87
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 678   gtccagccccactccctcctcc 699
             ||||||||||||||||||||||
Sbjct: 30806 gtccagccccactccctcctcc 30827

>emb|AJ011712.1|HSA011712 Homo sapiens TNNT1 gene, exons 1-11 (and joined CDS)
          Length = 16689

 Score = 44.1 bits (22), Expect = 0.87
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 678   gtccagccccactccctcctcc 699
             ||||||||||||||||||||||
Sbjct: 14429 gtccagccccactccctcctcc 14408

>gb|BT005725.1| Arabidopsis thaliana clone U20765 unknown protein (At3g06390) mRNA,
           complete cds
          Length = 631

 Score = 44.1 bits (22), Expect = 0.87
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 527 ggtggaacaagatctgcaacatctacgacaagtt 560
           |||||||||||||||| ||  |||||||||||||
Sbjct: 470 ggtggaacaagatctgtaatgtctacgacaagtt 503

>gb|BT003953.1| Arabidopsis thaliana clone RAFL15-07-K13 (R20765) unknown protein
           (At3g06390) mRNA, complete cds
          Length = 868

 Score = 44.1 bits (22), Expect = 0.87
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 527 ggtggaacaagatctgcaacatctacgacaagtt 560
           |||||||||||||||| ||  |||||||||||||
Sbjct: 542 ggtggaacaagatctgtaatgtctacgacaagtt 575

>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome
          Length = 7804765

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 650     gccggagaagccgctgatcga 670
               |||||||||||||||||||||
Sbjct: 4379934 gccggagaagccgctgatcga 4379954

>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 257     tgacgccgccgttcagattcg 277
               |||||||||||||||||||||
Sbjct: 2639773 tgacgccgccgttcagattcg 2639793

>gb|AC154093.1| Homo sapiens chromosome 13 clone fa0790, complete sequence
          Length = 37001

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 841   cgtgtgtgcatgggtgtacgtgtgc 865
             |||||||||||| ||||||||||||
Sbjct: 36125 cgtgtgtgcatgtgtgtacgtgtgc 36101

>gb|AC131694.4| Mus musculus BAC clone RP23-393L24 from chromosome 6, complete sequence
          Length = 187925

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 840    gcgtgtgtgcatgggtgtacgtgtg 864
              ||||||||||||| |||||||||||
Sbjct: 179245 gcgtgtgtgcatgtgtgtacgtgtg 179221

>gb|AY386265.1| Bovine papular stomatitis virus strain BV-AR02, complete genome
          Length = 134431

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 613    ctcgttctcctcgtcgtcctc 633
              |||||||||||||||||||||
Sbjct: 119200 ctcgttctcctcgtcgtcctc 119180

>gb|AF283506.1| Catharanthus roseus MYC1 (myc1) mRNA, complete cds
          Length = 1433

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 254 tcctgacgccgccgttcagattcgg 278
           |||| ||||||||||||||||||||
Sbjct: 390 tccttacgccgccgttcagattcgg 366

>gb|AF426357.1| Ribes cognatum isolate dna40 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, 5.8S ribosomal
           RNA gene, internal transcribed spacer 1, complete
           sequence and 28S ribosomal RNA gene, partial sequence
          Length = 695

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 75  agcgcgcgccccgacagaggg 95
           |||||||||||||||||||||
Sbjct: 141 agcgcgcgccccgacagaggg 121

>emb|AL590438.12| Human DNA sequence from clone RP11-22L13 on chromosome 1 Contains part
             of the PRDM16 gene for PR domain containing 16, complete
             sequence
          Length = 99477

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 839   cgcgtgtgtgcatgggtgtacgtgtgcgt 867
             |||||||||||||| |||| |||||||||
Sbjct: 67148 cgcgtgtgtgcatgtgtgtgcgtgtgcgt 67120

>emb|AL359649.8| Human DNA sequence from clone RP11-65D24 on chromosome 13 Contains 2
              novel genes, complete sequence
          Length = 144792

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 841    cgtgtgtgcatgggtgtacgtgtgc 865
              |||||||||||| ||||||||||||
Sbjct: 109894 cgtgtgtgcatgtgtgtacgtgtgc 109918

>gb|AC154023.4| Mus musculus 6 BAC RP24-345N6 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 124075

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 840   gcgtgtgtgcatgggtgtacgtgtg 864
             ||||||||||||| |||||||||||
Sbjct: 95621 gcgtgtgtgcatgtgtgtacgtgtg 95645

>gb|AC098806.3| Takifugu rubripes clone 208D11, complete sequence
          Length = 130460

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 613   ctcgttctcctcgtcgtcctc 633
             |||||||||||||||||||||
Sbjct: 53529 ctcgttctcctcgtcgtcctc 53549

>gb|AY037858.1| Cercopithicine herpesvirus 15 strain LCL8664, complete genome
          Length = 171096

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 596    tcatcgcctccatcatcctcgttct 620
              |||||||||||||||||||| ||||
Sbjct: 101481 tcatcgcctccatcatcctcattct 101505

>gb|AF509565.1| Streptomyces sp. JP95 griseorhodin biosynthesis gene cluster, complete
             sequence
          Length = 36905

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                              
Query: 574   ggcagcgccacctgcctcggcctcatcgcctcc 606
             |||||||||||||| |||| |||||||||||||
Sbjct: 19444 ggcagcgccacctg-ctcgacctcatcgcctcc 19475


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 129,703,861
Number of extensions: 7347439
Number of successful extensions: 248399
Number of sequences better than 10.0: 27
Number of HSP's gapped: 248398
Number of HSP's successfully gapped: 32
Length of query: 908
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 885
Effective length of database: 18,503,978,556
Effective search space: 16376021022060
Effective search space used: 16376021022060
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)