ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf85p22 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK119609:Os03g0847900 | 141 | 7e-34 | 2 | AK061411:Os03g0847900 | 141 | 7e-34 | 3 | Os01g0917700:Os01g0917700 | 43 | 3e-04 | 4 | AK099317:Os07g0446000 | 40 | 0.002 | 5 | AK072251:Os07g0446000 | 40 | 0.002 | 6 | AK067855:Os04g0627400 | 38 | 0.011 | 7 | AK103596:Os07g0408500 | 34 | 0.15 | 8 | Os02g0671200:Os02g0671200 | 32 | 0.45 | 9 | AK101984:Os04g0577200 | 30 | 2.2 | 10 | AK071807:Os11g0153400 | 30 | 2.2 | 11 | AK067300:Os12g0155200 | 30 | 2.2 | 12 | AK108137:Os01g0967200 | 29 | 3.8 | 13 | AY364310:Os12g0533400 | 29 | 5.0 | 14 | AY364311:Os02g0679500 | 29 | 5.0 | 15 | AK110977:Os06g0681300 | 28 | 8.5 | 16 | AK071104:Os06g0612300 | 28 | 8.5 | 17 | AK119387:Os07g0496300 | 28 | 8.5 |
|---|
>AK119609:Os03g0847900 | Length = 166 Score = 141 bits (355), Expect = 7e-34 Identities = 86/164 (52%), Positives = 100/164 (60%), Gaps = 11/164 (6%) Frame = +3 Query: 69 MKDRRAGAG-FPFSIGCMSQSAVAVADPLEKKPMXXXXXXXXXXXXXXXXXXXXXXERSA 245 MK+RR AG FPFSIGCMSQSAV VADP +KK +SA Sbjct: 1 MKERRGSAGVFPFSIGCMSQSAVDVADPHDKKSTTTTQNDPSSSSASAAAMAAAA--QSA 58 Query: 246 GEESGEDKARNA--------AASGIVSAGVQRLLKGIKTF--FXXXXXXXXXXXXXXXIV 395 EE G +K + A A+SGIV+ GVQRL+KGIK+ +V Sbjct: 59 EEEGGGEKVKGATAAAAAAVASSGIVATGVQRLIKGIKSLSQIFAMYDDEEEDEEEREMV 118 Query: 396 IGFPTDVQHVGHIGWDGINKVGGMVGAFSLPSSLSLRQLEIAMD 527 IG+PTDVQHVGHIGWDG+NKVGGMV AFSLPSSLSLRQLE+AM+ Sbjct: 119 IGYPTDVQHVGHIGWDGMNKVGGMVNAFSLPSSLSLRQLEMAME 162
>AK061411:Os03g0847900 | Length = 166 Score = 141 bits (355), Expect = 7e-34 Identities = 86/164 (52%), Positives = 100/164 (60%), Gaps = 11/164 (6%) Frame = +3 Query: 69 MKDRRAGAG-FPFSIGCMSQSAVAVADPLEKKPMXXXXXXXXXXXXXXXXXXXXXXERSA 245 MK+RR AG FPFSIGCMSQSAV VADP +KK +SA Sbjct: 1 MKERRGSAGVFPFSIGCMSQSAVDVADPHDKKSTTTTQNDPSSSSASAAAMAAAA--QSA 58 Query: 246 GEESGEDKARNA--------AASGIVSAGVQRLLKGIKTF--FXXXXXXXXXXXXXXXIV 395 EE G +K + A A+SGIV+ GVQRL+KGIK+ +V Sbjct: 59 EEEGGGEKVKGATAAAAAAVASSGIVATGVQRLIKGIKSLSQIFAMYDDEEEDEEEREMV 118 Query: 396 IGFPTDVQHVGHIGWDGINKVGGMVGAFSLPSSLSLRQLEIAMD 527 IG+PTDVQHVGHIGWDG+NKVGGMV AFSLPSSLSLRQLE+AM+ Sbjct: 119 IGYPTDVQHVGHIGWDGMNKVGGMVNAFSLPSSLSLRQLEMAME 162
>Os01g0917700:Os01g0917700 | Length = 186 Score = 42.7 bits (99), Expect = 3e-04 Identities = 45/155 (29%), Positives = 56/155 (36%), Gaps = 6/155 (3%) Frame = +3 Query: 99 PFSIGCMSQSAVAVADPLE--KKPMXXXXXXXXXXXXXXXXXXXXXXERSAGEESGEDKA 272 PFS C + S+V V D + KKP G E G A Sbjct: 18 PFSSTCRNGSSVDVVDGGKSGKKPQGGG---------------------GGGGEGGGGAA 56 Query: 273 RNAAASGIVSAGVQRLLKGIKT----FFXXXXXXXXXXXXXXXIVIGFPTDVQHVGHIGW 440 N + V RLL+G K F +VIG PTDV+HV HIGW Sbjct: 57 ENKPKGESL---VARLLRGFKNLSQIFAVYEDDGEEEEEEEREMVIGLPTDVKHVAHIGW 113 Query: 441 DGINKVGGMVGAFSLPSSLSLRQLEIAMDPGASTT 545 DG S ++ SLR A P +S + Sbjct: 114 DG-----------STNTTTSLRSWNRAAPPSSSAS 137
>AK099317:Os07g0446000 | Length = 251 Score = 40.0 bits (92), Expect = 0.002 Identities = 15/17 (88%), Positives = 16/17 (94%) Frame = +3 Query: 396 IGFPTDVQHVGHIGWDG 446 IGFPTDV+HV HIGWDG Sbjct: 31 IGFPTDVKHVAHIGWDG 47
>AK072251:Os07g0446000 | Length = 251 Score = 40.0 bits (92), Expect = 0.002 Identities = 15/17 (88%), Positives = 16/17 (94%) Frame = +3 Query: 396 IGFPTDVQHVGHIGWDG 446 IGFPTDV+HV HIGWDG Sbjct: 31 IGFPTDVKHVAHIGWDG 47
>AK067855:Os04g0627400 | Length = 85 Score = 37.7 bits (86), Expect = 0.011 Identities = 14/18 (77%), Positives = 16/18 (88%) Frame = +3 Query: 396 IGFPTDVQHVGHIGWDGI 449 IG PTDV+HV HIGWDG+ Sbjct: 13 IGSPTDVKHVAHIGWDGL 30
>AK103596:Os07g0408500 | Length = 487 Score = 33.9 bits (76), Expect = 0.15 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = +3 Query: 396 IGFPTDVQHVGHIGWDGINKVGGMVGAFSL 485 IG+PTDV+HV H+ +D +N G+ F L Sbjct: 76 IGWPTDVRHVAHVTFDRLNGFLGLPAEFEL 105
>Os02g0671200:Os02g0671200 | Length = 462 Score = 32.3 bits (72), Expect = 0.45 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 4/74 (5%) Frame = -1 Query: 634 TLFLLAPSDGGFSSSRSMTMVTEIGQLMQVVVEAPGSMAISSWRREREDGNEKAPTMPPT 455 T F++A + G+S S + G L+++ A SSWR P PP Sbjct: 135 TRFVVAMAATGWSDLPSELLSEIAGGLVELGDIARFRSVCSSWRAAAGGAAAAPPPQPPW 194 Query: 454 LLIPSQP----MCP 425 LL+PS P CP Sbjct: 195 LLLPSSPSRLFFCP 208
>AK101984:Os04g0577200 | Length = 479 Score = 30.0 bits (66), Expect = 2.2 Identities = 16/34 (47%), Positives = 22/34 (64%) Frame = +3 Query: 396 IGFPTDVQHVGHIGWDGINKVGGMVGAFSLPSSL 497 IG PTDV+HV H+ +D + GG +G LP+ L Sbjct: 95 IGRPTDVRHVSHVTFD---RFGGFLG---LPADL 122
>AK071807:Os11g0153400 | Length = 479 Score = 30.0 bits (66), Expect = 2.2 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +3 Query: 396 IGFPTDVQHVGHIGWD 443 IG+PTDVQHV H+ +D Sbjct: 91 IGWPTDVQHVAHVTFD 106
>AK067300:Os12g0155200 | Length = 193 Score = 30.0 bits (66), Expect = 2.2 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +3 Query: 396 IGFPTDVQHVGHIGWD 443 IG+PTDVQHV H+ +D Sbjct: 67 IGWPTDVQHVAHVTFD 82
>AK108137:Os01g0967200 | Length = 258 Score = 29.3 bits (64), Expect = 3.8 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 Query: 396 IGFPTDVQHVGHIGWDGINKVGGM 467 IG+PTDV+HV H+ +D + G+ Sbjct: 27 IGWPTDVRHVAHVTFDRFHGFQGL 50
>AY364310:Os12g0533400 | Length = 364 Score = 28.9 bits (63), Expect = 5.0 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +3 Query: 396 IGFPTDVQHVGHIGWDGINKVGGMVGAFSL 485 IG+PTDV+HV H+ +D + G+ F + Sbjct: 3 IGWPTDVRHVAHVTFDRFHGFLGLPVEFEV 32
>AY364311:Os02g0679500 | Length = 439 Score = 28.9 bits (63), Expect = 5.0 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +3 Query: 396 IGFPTDVQHVGHIGWDGINKVGGMVGAFSLPSSL 497 IG PTDV+HV H+ +D VG LP+ L Sbjct: 64 IGRPTDVRHVSHVTFD------RFVGFLGLPADL 91
>AK110977:Os06g0681300 | Length = 158 Score = 28.1 bits (61), Expect = 8.5 Identities = 11/14 (78%), Positives = 12/14 (85%) Frame = +3 Query: 396 IGFPTDVQHVGHIG 437 IG PTDV+HV HIG Sbjct: 29 IGCPTDVRHVSHIG 42
>AK071104:Os06g0612300 | Length = 445 Score = 28.1 bits (61), Expect = 8.5 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 5/37 (13%) Frame = +3 Query: 234 ERSAGEESGEDKARNAAAS-----GIVSAGVQRLLKG 329 E GEE ED+A AAA+ G S G+ +L KG Sbjct: 225 EEEGGEEEDEDEAAAAAATATLPLGCASIGIGKLTKG 261
>AK119387:Os07g0496300 | Length = 252 Score = 28.1 bits (61), Expect = 8.5 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 8/51 (15%) Frame = -1 Query: 520 AISSWRRE-----REDGNEKAPTMPPTLLIPSQPMCPTC---CTSVGNPMT 392 A+ +WRR R ++PT+PP+ S P P C C P T Sbjct: 150 ALGAWRRSPSSSSRRPTRSESPTLPPSTTTRSPPPRPPCRWHCCRRARPTT 200 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,610,701 Number of extensions: 296714 Number of successful extensions: 797 Number of sequences better than 10.0: 17 Number of HSP's gapped: 792 Number of HSP's successfully gapped: 17 Length of query: 294 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 194 Effective length of database: 11,395,755 Effective search space: 2210776470 Effective search space used: 2210776470 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
