ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf85p22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1O08816:WASL_RAT Neural Wiskott-Aldrich syndrome protein - Rattus... 32 2.6
2Q91YD9:WASL_MOUSE Neural Wiskott-Aldrich syndrome protein - Mus ... 32 2.6
3O00401:WASL_HUMAN Neural Wiskott-Aldrich syndrome protein - Homo... 32 2.6
4Q95107:WASL_BOVIN Neural Wiskott-Aldrich syndrome protein - Bos ... 32 2.6
5Q90268:PAX2A_DANRE Paired box protein Pax-2a - Danio rerio (Zebr... 31 7.5

>O08816:WASL_RAT Neural Wiskott-Aldrich syndrome protein - Rattus norvegicus (Rat)|
          Length = 501
 Score = 32.3 bits (72), Expect = 2.6
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = +3

Query: 396 IGFPTDVQHVGHIGWD 443
           IG P++ QH+GH+GWD
Sbjct: 200 IGTPSNFQHIGHVGWD 215



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>Q91YD9:WASL_MOUSE Neural Wiskott-Aldrich syndrome protein - Mus musculus (Mouse)|
          Length = 501

 Score = 32.3 bits (72), Expect = 2.6
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = +3

Query: 396 IGFPTDVQHVGHIGWD 443
           IG P++ QH+GH+GWD
Sbjct: 200 IGTPSNFQHIGHVGWD 215



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>O00401:WASL_HUMAN Neural Wiskott-Aldrich syndrome protein - Homo sapiens (Human)|
          Length = 505

 Score = 32.3 bits (72), Expect = 2.6
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = +3

Query: 396 IGFPTDVQHVGHIGWD 443
           IG P++ QH+GH+GWD
Sbjct: 203 IGTPSNFQHIGHVGWD 218



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>Q95107:WASL_BOVIN Neural Wiskott-Aldrich syndrome protein - Bos taurus (Bovine)|
          Length = 505

 Score = 32.3 bits (72), Expect = 2.6
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = +3

Query: 396 IGFPTDVQHVGHIGWD 443
           IG P++ QH+GH+GWD
Sbjct: 203 IGTPSNFQHIGHVGWD 218



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>Q90268:PAX2A_DANRE Paired box protein Pax-2a - Danio rerio (Zebrafish) (Brachydanio|
           rerio)
          Length = 410

 Score = 30.8 bits (68), Expect = 7.5
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 405 PTDVQHVGHIGWDGINKVGGM-VGAFSLPSSLSLRQLEIA 521
           P    H+ HIG  G+N++GG+ V    LP  +  R +E+A
Sbjct: 9   PFSAMHLSHIGHGGVNQLGGVFVNGRPLPDVVRQRIVELA 48


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 95,451,643
Number of extensions: 1788887
Number of successful extensions: 4252
Number of sequences better than 10.0: 5
Number of HSP's gapped: 4248
Number of HSP's successfully gapped: 5
Length of query: 294
Length of database: 100,686,439
Length adjustment: 112
Effective length of query: 182
Effective length of database: 69,965,399
Effective search space: 12733702618
Effective search space used: 12733702618
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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