Clone Information

BLAST Search Result

Clone Name	FLbaf85o13
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	Os08g0559700:Os08g0559700	166	2e-41
2	AK101047:Os05g0179800	39	0.004
3	AK108478:Os01g0858500	33	0.32
4	AK111162:	31	1.2
5	Os05g0418800:Os05g0418800	31	1.6
6	AK120716:Os07g0499800	30	2.1
7	AK105412:Os01g0661000	30	2.1
8	AK101958:Os01g0661000	30	2.1
9	AK109948:	30	2.7
10	AK071582:Os01g0626900	30	3.6
11	AK066800:Os10g0377800	30	3.6
12	Os01g0605500:Os01g0605500	29	4.6
13	AB117990:Os03g0350300	29	4.6
14	AK110454:	29	4.6
15	AK110218:	29	4.6
16	AK121934:Os04g0525600	29	4.6
17	AK110820:Os03g0652000	29	4.6
18	AK102886:Os02g0288200	29	4.6
19	AK073164:Os03g0350300	29	4.6
20	AK073147:Os02g0288200	29	4.6
21	AK064073:Os04g0525600	29	4.6
22	Os06g0145800:Os06g0145800	29	4.7
23	Os04g0100300:Os04g0100300	29	6.1
24	AK100329:Os03g0288900	29	6.1
25	AK121236:Os06g0712800	24	7.4
26	Os07g0598700:Os07g0598700	28	7.9
27	AK107297:Os12g0105600	28	7.9
28	AK101830:Os07g0557500	28	7.9
29	AK066705:Os04g0530300	28	7.9

>Os08g0559700:Os08g0559700 |
          Length = 144
 Score =  166 bits (421), Expect = 2e-41
 Identities = 83/110 (75%), Positives = 92/110 (83%)
 Frame = +3

Query: 570 AQTWVDRMSALEPDELNDKDFEGRPSGLGLGARVAPNAKRAAPTDPVERRLLGKVNAQKR 749
           AQTWVD+MSA + DE   KDFEGRP GLGLGA+VAPN KRAAPTDPVERRLLGKVNAQKR
Sbjct: 35  AQTWVDKMSASDQDEPKAKDFEGRPPGLGLGAKVAPNVKRAAPTDPVERRLLGKVNAQKR 94

Query: 750 KSAEEEKANTQEMNEASDDDSGEPQGRTSACSKKRELPSVTSMPSGKKAK 899
           K+ EEEK   QE+N+ SDDDSGE + RTSA SKKR  PSVT+MP GKKA+
Sbjct: 95  KATEEEKTIAQEVNDDSDDDSGETESRTSAFSKKRTAPSVTAMPLGKKAR 144

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>AK101047:Os05g0179800 |
          Length = 311

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
 Frame = +3

Query: 591 MSALEPDELNDKDFEGRPSGLGLGARVAPNAKRAAPTDPVERRLLGKVNAQKRKSAEEEK 770
           ++ LE    ++ D +   +G     + A    +     P E +   K  A+K KSA+E K
Sbjct: 172 LAELELSSKSNNDAQNETNGKKGAEQAADGENKEGAPAPAESKSSKKKKAKKDKSAKEAK 231

Query: 771 ANTQEMNEASDDDSG-EPQGRTSACSKKRELPSVTSMPSGKKAK 899
             TQE+N   ++ +G EP    ++   K  +  V SM   K +K
Sbjct: 232 -ETQELNGGVEEAAGAEPDEEVASMDVKDRIKKVASMKKKKSSK 274

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>AK108478:Os01g0858500 |
          Length = 301

 Score = 33.1 bits (74), Expect = 0.32
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = -1

Query: 672 PLSHQDQALKAGPRNPYHSVHPAPAHSSCPPMSGPENDR*NG*V*HNYTKVPSTQQIQQQ 493
           PL      + A  R P H  HP P H+  P +S P+    N  +     K+P  Q +QQQ
Sbjct: 8   PLQQTPPNVSAPLRPPQHRPHPRPYHA--PAISHPQ----NALLTQQQQKLPQHQHLQQQ 61

Query: 492 KEER 481
           ++++
Sbjct: 62  QQQQ 65

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>AK111162: |
          Length = 252

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +1

Query: 43  PPPPALPHTLADPRAHATSATSPC*PPTRACFAAP 147
           PPP ALP+T +  R    +   P  PP+RA  +AP
Sbjct: 114 PPPRALPYTASPRRRRVPAPRLPKPPPSRAPASAP 148

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>Os05g0418800:Os05g0418800 |
          Length = 417

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 31  AGSSPPPPALPHTLADPRAHATSATSPC*PPTRACFAA 144
           A + PPPP+LP +     ++A+    P  PP   C AA
Sbjct: 266 AAAPPPPPSLPASATTRNSNASQLLMPPPPPRPPCAAA 303

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>AK120716:Os07g0499800 |
          Length = 752

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 28/104 (26%), Positives = 42/104 (40%)
 Frame = +3

Query: 570 AQTWVDRMSALEPDELNDKDFEGRPSGLGLGARVAPNAKRAAPTDPVERRLLGKVNAQKR 749
           A+  V R  +  P + +     G   G G GA + P A RA+            +  + R
Sbjct: 130 ARAAVFREPSPAPSDASSGAGAGCGGGAGCGAELPPAAPRAS-----------SLIQRWR 178

Query: 750 KSAEEEKANTQEMNEASDDDSGEPQGRTSACSKKRELPSVTSMP 881
           +      A  +  + ASD D G P+GR     KK  L   +S+P
Sbjct: 179 EIEAVGPATPRPCDLASDSDGGSPRGRVGCIVKK--LSGTSSIP 220

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>AK105412:Os01g0661000 |
          Length = 405

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 16/40 (40%), Positives = 18/40 (45%)
 Frame = +1

Query: 40  SPPPPALPHTLADPRAHATSATSPC*PPTRACFAAPRLQS 159
           S PPP  PH   DP   +    +P  PP  A  AAP   S
Sbjct: 21  SHPPPPTPHPATDPPPISPQNPTPPPPPLPASAAAPTTPS 60

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>AK101958:Os01g0661000 |
          Length = 405

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 16/40 (40%), Positives = 18/40 (45%)
 Frame = +1

Query: 40  SPPPPALPHTLADPRAHATSATSPC*PPTRACFAAPRLQS 159
           S PPP  PH   DP   +    +P  PP  A  AAP   S
Sbjct: 21  SHPPPPTPHPATDPPPISPQNPTPPPPPLPASAAAPTTPS 60

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>AK109948: |
          Length = 1153

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
 Frame = +3

Query: 654 GLGARVAPNAKRAAPTDPVERRLLGKVNA--QKRKSAEEEKANTQEMNEASDDDSGEPQG 827
           G  A  A NAK+    D   R       A   ++ SA+++    Q  ++  DDD GE   
Sbjct: 267 GAAATAATNAKKPQSADEARRAAAKARQAAIMQKFSAQQKSLLNQFGSDDDDDDEGEVDA 326

Query: 828 RTSACSKKRELP 863
            TS+   +   P
Sbjct: 327 ATSSVDAEARAP 338

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>AK071582:Os01g0626900 |
          Length = 245

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
 Frame = +3

Query: 657 LGARVAPNAKRAAPTDPVER-RLLGKVNAQKRKSAEEEKANTQEMN------EASDDDSG 815
           L +++ P+A  A P+ P    R  G+ N    + +   K +T+E++      E SD+D  
Sbjct: 91  LVSKLNPSATNAFPSYPEPICRSSGQDNGNLEEVSSSFKEDTREIDALLSSDEESDEDDV 150

Query: 816 EPQGRTSACSKKRELPSVTSMPSGKK 893
           +  GRT  C +   L S +S P  +K
Sbjct: 151 KSTGRTPDCFESDSLDS-SSPPRSRK 175

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>AK066800:Os10g0377800 |
          Length = 548

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +1

Query: 37  SSPPPPALPHTLADPRAHATSATSPC*PPTRA 132
           SSP PP  PH+ + PR+ +     P  PP RA
Sbjct: 30  SSPTPPPPPHSSSLPRSPSPRPRLPLPPPRRA 61

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>Os01g0605500:Os01g0605500 |
          Length = 776

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 276 APPFHRASVPPPANPSLPVHVFLLSKR 356
           APP  RA  PPPA P    HV + S++
Sbjct: 116 APPEERAPPPPPAPPPKSSHVVVFSRQ 142

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>AB117990:Os03g0350300 |
          Length = 189

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 18/65 (27%), Positives = 32/65 (49%)
 Frame = +3

Query: 705 PVERRLLGKVNAQKRKSAEEEKANTQEMNEASDDDSGEPQGRTSACSKKRELPSVTSMPS 884
           P E+      + +  K  +++K+   E + A+D D G+ + +T   SK+ E P V +   
Sbjct: 92  PAEKTTKEDGDQEGEKKKKKKKSKESEESPAADADGGKKKKKT---SKESEEPPVATTEG 148

Query: 885 GKKAK 899
            KK K
Sbjct: 149 EKKEK 153

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>AK110454: |
          Length = 1074

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +3

Query: 705 PVERRLLGKVNAQKRKSAEEEKANTQEMNEASDDDSGEPQGRTSACS 845
           PV RR++G VN      +  +   T+       + S    GRTS CS
Sbjct: 361 PVNRRIVGVVNGHGSAPSRNDTNPTRSGRRPLSESSVTTTGRTSVCS 407

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>AK110218: |
          Length = 875

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 20/61 (32%), Positives = 26/61 (42%)
 Frame = +3

Query: 534 CVIPIHFTCHSQAQTWVDRMSALEPDELNDKDFEGRPSGLGLGARVAPNAKRAAPTDPVE 713
           CV P   T     Q W +  +AL P            +G G  A+VAP   +AAP D + 
Sbjct: 244 CVAP---TLSGLLQHWREVQAALAPKSA---------AGAGAAAKVAPAQLQAAPVDAIS 291

Query: 714 R 716
           R
Sbjct: 292 R 292

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>AK121934:Os04g0525600 |
          Length = 309

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = +3

Query: 315 NPSLPVHVFLLSKRG*IQSSVLRLDA---YRSAVLLLCFGQSSCL 440
           NP+ PVH+++ S  G + + +   D     RS V  LC GQ++ +
Sbjct: 138 NPAKPVHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASM 182

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>AK110820:Os03g0652000 |
          Length = 422

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
 Frame = +3

Query: 663 ARVAPNAKRAAPTDPVERRLLGKVNAQKRKSAE----EEKANTQEMNEASDDDSGEPQGR 830
           A  A  A+   P  P E +   +   +++KSAE    EEK + ++  E    D  +P+  
Sbjct: 182 AAAASAAEEKKPEAPAEEKKAEEAKKEEKKSAEADKKEEKDDKKKSPEKGKKDGEKPKEE 241

Query: 831 TSACSK-KRELPSVTSMPS 884
             A  + K+E+  V   PS
Sbjct: 242 GKAKDETKKEVAPVPPSPS 260

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>AK102886:Os02g0288200 |
          Length = 578

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
 Frame = +3

Query: 654 GLGARVAPNAKRAAPTDPVERRLLGKVNAQKRKSAEEEKANTQEMNE--ASDDDSGEPQG 827
           G+  +V  + + A    P + +   K  + K K  EE K+ T ++    A+DDD G   G
Sbjct: 354 GMETKVGSSKEAALAASPTKGK---KKGSHKDKLDEEAKSGTAKVTSTIATDDDDGTLGG 410

Query: 828 RTSACSKKRELPSVTSMPSGKKA 896
                + K EL   T +   K+A
Sbjct: 411 SKREKAGKEELDGDTHIVMPKEA 433

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>AK073164:Os03g0350300 |
          Length = 568

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 18/65 (27%), Positives = 32/65 (49%)
 Frame = +3

Query: 705 PVERRLLGKVNAQKRKSAEEEKANTQEMNEASDDDSGEPQGRTSACSKKRELPSVTSMPS 884
           P E+      + +  K  +++K+   E + A+D D G+ + +T   SK+ E P V +   
Sbjct: 471 PAEKTTKEDGDQEGEKKKKKKKSKESEESPAADADGGKKKKKT---SKESEEPPVATTEG 527

Query: 885 GKKAK 899
            KK K
Sbjct: 528 EKKEK 532

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>AK073147:Os02g0288200 |
          Length = 337

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
 Frame = +3

Query: 654 GLGARVAPNAKRAAPTDPVERRLLGKVNAQKRKSAEEEKANTQEMNE--ASDDDSGEPQG 827
           G+  +V  + + A    P + +   K  + K K  EE K+ T ++    A+DDD G   G
Sbjct: 113 GMETKVGSSKEAALAASPTKGK---KKGSHKDKLDEEAKSGTAKVTSTIATDDDDGTLGG 169

Query: 828 RTSACSKKRELPSVTSMPSGKKA 896
                + K EL   T +   K+A
Sbjct: 170 SKREKAGKEELDGDTHIVMPKEA 192

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>AK064073:Os04g0525600 |
          Length = 259

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = +3

Query: 315 NPSLPVHVFLLSKRG*IQSSVLRLDA---YRSAVLLLCFGQSSCL 440
           NP+ PVH+++ S  G + + +   D     RS V  LC GQ++ +
Sbjct: 88  NPAKPVHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASM 132

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>Os06g0145800:Os06g0145800 |
          Length = 287

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = +1

Query: 22  LLVAGSSPPPPALPHTLADPRAHATSATSPC*PPTRACFAAP 147
           L ++  SPPPP LPH L   R  A    +P     R     P
Sbjct: 8   LFLSLPSPPPPPLPHLLPSHRPAAALTLAPALSSRRVSSVCP 49

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>Os04g0100300:Os04g0100300 |
          Length = 906

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
 Frame = +1

Query: 34  GSSPPPPALPHTLADP-----RAHATSATSPC*PPTRACFAAPR 150
           G+ PPPPA P   A P      + A + + P  PP  A  AAPR
Sbjct: 319 GAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPR 362

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>AK100329:Os03g0288900 |
          Length = 541

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +1

Query: 40  SPPPPALPHTLADPRAHATSATSPC*PP 123
           SPPPP  P  ++ P A   S  SP  PP
Sbjct: 79  SPPPPQKPDKVSPPPAQKPSKVSPPPPP 106

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>AK121236:Os06g0712800 |
          Length = 547

 Score = 23.9 bits (50), Expect(2) = 7.4
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +3

Query: 639 RPSGLGLGARVAPNAKRAAPTDPVERRLLGKVN--AQKRKSAEEE 767
           RP   G G   A    RAAP D  E ++   V+  A  R+ A+EE
Sbjct: 48  RPRRGGRGRSRARREPRAAPADAEEEQIDHGVDGGASLRREAQEE 92



 Score = 23.1 bits (48), Expect(2) = 7.4
 Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = +3

Query: 741 QKRKSAEEEKANTQEMNEASDDDSG---EPQGRTSACSKKREL 860
           Q+++  EEE+    E    S+ D+G   +P+ + +   +  E+
Sbjct: 114 QQQQQPEEERGGDAEAARTSESDAGGEVDPEDKPTVSERTEEM 156

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>Os07g0598700:Os07g0598700 |
          Length = 454

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
 Frame = +3

Query: 594 SALEPDELNDKDFE---GRPSGLGLGARVAPNAKRAAPTDPVERRLLGKVNAQKRKSAEE 764
           +AL  DE  DK  E   G+    G GA +   AKR+  ++ +  +L  ++  QK K+ E+
Sbjct: 253 TALTSDEQVDKTIEKIDGQYYERG-GAILENMAKRSEESELLIEQLKEELREQKLKAKED 311

Query: 765 EKANTQEMNEASDDDSG--EPQGRTSACSKKRELPSVTSM 878
            +  TQEM E     +G  E + +  +C ++  +  +  +
Sbjct: 312 AEDLTQEMAELRYQITGMLEEEYKRRSCIEQAAIQQIQEL 351

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>AK107297:Os12g0105600 |
          Length = 314

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +3

Query: 708 VERRLLGKVNAQKRKSAEEEKANTQEMNEASDDDSGEPQGRTSACSKKR 854
           +E+   GK    + K+A      +   +   +++SGE Q RTS+ S  R
Sbjct: 1   MEKTSAGKEEGSESKTAAANNDGSSTSSTTEEEESGESQRRTSSSSSVR 49

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>AK101830:Os07g0557500 |
          Length = 693

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
 Frame = +3

Query: 630 FEGRPSGLGLGARVAPNAKRAAPTDPVERRLLGKVNAQKRKSAEEEK-------ANTQEM 788
           ++GR  G G G        RAA   PVE     +V+ +  KS EEE+           E 
Sbjct: 6   YKGRGRGRGRGRGRGKGRGRAADATPVE-----EVDVEGAKSEEEEEEEAAAGSGGDTEA 60

Query: 789 NEASDDDSGEPQG 827
            +A ++ + E +G
Sbjct: 61  EDAKEEGASESEG 73

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>AK066705:Os04g0530300 |
          Length = 357

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
 Frame = +3

Query: 624 KDFEGRPSGLG-LGARVAPNAKRAAPTDPVERRLLGKVNAQ-----KRKSAEEEKANTQE 785
           KD  G  +G G   A VA  ++  +     E R  G+ +       K K  EEE+   +E
Sbjct: 3   KDQNGSAAGEGEAAAAVAARSRSKSIEADEEERSKGRRDRDRDRRGKSKRREEEEEEEEE 62

Query: 786 MNEASDDDSGEPQGRTSACSKKRE 857
             +A  + SGE  G      +K +
Sbjct: 63  EGDAGSESSGEDSGERRKRRRKEK 86


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 25,736,769
Number of extensions: 577107
Number of successful extensions: 3532
Number of sequences better than 10.0: 29
Number of HSP's gapped: 3496
Number of HSP's successfully gapped: 30
Length of query: 339
Length of database: 15,399,855
Length adjustment: 101
Effective length of query: 238
Effective length of database: 11,355,714
Effective search space: 2702659932
Effective search space used: 2702659932
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result