| Clone Name | FLbaf85m22 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK110935:Os07g0173300 | 32 | 0.47 | 2 | AK067184:Os04g0191800 | 29 | 0.70 | 3 | AJ428900:Os02g0551400 | 28 | 5.2 | 4 | AK119501:Os06g0611400 | 28 | 5.2 | 5 | AK068448:Os02g0551400 | 28 | 5.2 | 6 | AK110278: | 28 | 6.8 |
|---|
>AK110935:Os07g0173300 | Length = 451 Score = 31.6 bits (70), Expect = 0.47 Identities = 18/45 (40%), Positives = 31/45 (68%) Frame = -3 Query: 333 RSKVSQLIGHSQDRRCILVSNSRHPNKSYNNKAPEQGTVNINTSA 199 RSK ++++G + D + IL+ N + +S ++KAP+ TVN+ TSA Sbjct: 276 RSKNTKVVGETSDAK-ILMKNKAN-RESGDDKAPKNCTVNLETSA 318
>AK067184:Os04g0191800 | Length = 400 Score = 28.9 bits (63), Expect(2) = 0.70 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 7/63 (11%) Frame = +2 Query: 32 LISLRWQRFARSHTQLLGAHRSAP------ACGFGDYLFVSETHPSKAGQRLGVSL-THP 190 L+ W+R + LL HR P AC + D +++ + G+R G + HP Sbjct: 41 LVCRAWRRLTSTRDFLLAHHRHQPSLPLIAACDYADIMYLIDVLTLTLGRRRGAAARLHP 100 Query: 191 QSR 199 +R Sbjct: 101 VAR 103 Score = 20.8 bits (42), Expect(2) = 0.70 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = +1 Query: 199 STRIYVDCPLFRCFVIIGFIRMPRVGD 279 +TR + D PL F+ +G + GD Sbjct: 136 TTRQFGDLPLISGFMFLGLYQHSPTGD 162
>AJ428900:Os02g0551400 | Length = 665 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Frame = +2 Query: 527 LVP*HLTKERTGRANGSGHPLVAGVAP---SPDQAPKKKKK 640 LVP H TG + S P G +P P+ PKKKKK Sbjct: 126 LVPGHRLTNGTGPVSSSKQPSHTGSSPDPLDPNGHPKKKKK 166
>AK119501:Os06g0611400 | Length = 419 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/54 (29%), Positives = 28/54 (51%) Frame = -1 Query: 308 VTLKIEDASWSPTRGILINPIITKHLNRGQST*IRVLATAGV*AKLLIAVRPCL 147 V +K+ ++ SP RG+ + I +++ RG +T R AG A + PC+ Sbjct: 366 VAVKLSCSAASPCRGVELRDIDLRYVRRGVATVSRCANVAGGVAGGTLVPPPCI 419
>AK068448:Os02g0551400 | Length = 719 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Frame = +2 Query: 527 LVP*HLTKERTGRANGSGHPLVAGVAP---SPDQAPKKKKK 640 LVP H TG + S P G +P P+ PKKKKK Sbjct: 180 LVPGHRLTNGTGPVSSSKQPSHTGSSPDPLDPNGHPKKKKK 220
>AK110278: | Length = 661 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +2 Query: 557 TGRANGSGHPLVAGVAPSPDQAPKKKKK 640 TG +GSG P PSPDQ+P ++K+ Sbjct: 193 TGTGSGSGKPQRL---PSPDQSPPRRKR 217 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 20,947,721 Number of extensions: 513243 Number of successful extensions: 1086 Number of sequences better than 10.0: 6 Number of HSP's gapped: 1085 Number of HSP's successfully gapped: 7 Length of query: 213 Length of database: 15,399,855 Length adjustment: 96 Effective length of query: 117 Effective length of database: 11,555,919 Effective search space: 1352042523 Effective search space used: 1352042523 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)