>LOC_Os11g45240:12011.t04052:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 7955
 Score = 30.9 bits (61), Expect(2) = 1.3
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1 / +3

                                         
Query: 632  FFSVLDPGTGPLQRPKGGQTRSPFQFSLL 546
            +FS LDP T  LQ P    TR  F++ ++
Sbjct: 1278 YFSWLDPSTSNLQLPNDDSTRKAFRWPIV 1364



 Score = 25.4 bits (49), Expect(2) = 1.3
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -3 / +1

                                               
Query: 267  RHPNKSYNNKAPEQGTVNINTSARDCGCVSETPNR 163
            R P+K  NN +P   +   +T    C C+ + P R
Sbjct: 5734 RRPSKISNNSSPSHRS*LHHTRRSRCCCMYQPPPR 5838

>LOC_Os11g45250:12011.t04053:unspliced-genomic ribonucleases P/MRP protein subunit POP1 containing protein,|
            expressed
          Length = 4918

 Score = 33.6 bits (67), Expect = 1.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1 / +3

                                        
Query: 632  FFSVLDPGTGPLQRPKGGQTRSPFQFSL 549
            +FS LDP T  LQ P G  TR  F++ +
Sbjct: 4326 YFSWLDPSTSNLQLPNGDSTRKAFRWPI 4409

>LOC_Os11g16760:12011.t01456:unspliced-genomic hypothetical protein|
          Length = 899

 Score = 33.1 bits (66), Expect = 1.8
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3 / -3

                                      
Query: 285 CIFYLESDL*VGIPCFDHRGMLG*WEH 365
           CIFY + D+*  + CFD      *WEH
Sbjct: 858 CIFYPKHDV*QTVMCFDSEWKRQ*WEH 778

>LOC_Os07g43070:12007.t03954:unspliced-genomic expressed protein|
          Length = 3436

 Score = 33.1 bits (66), Expect = 1.8
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1 / +1

                                     
Query: 605 GPLQRPKGGQTRSPFQFSLLLSVMEQ 528
           GP +RP  G+TRSP  FS +L++ ++
Sbjct: 271 GPRRRPTAGRTRSPAVFSRVLAIAQR 348

>LOC_Os07g42660:12007.t03916:unspliced-genomic caltractin, putative, expressed|
          Length = 2283

 Score = 33.1 bits (66), Expect = 1.8
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2 / -2

                                          
Query: 128 FVSETHPSKAGQRLGVSLTHPQSRALVFMLT 220
           F+   HPSK G +LG  +TH   ++L ++ T
Sbjct: 647 FLVMNHPSKIGYQLGKMITHDPKKSLCYITT 555

>LOC_Os04g57804:12004.t005507:unspliced-genomic expressed protein|
          Length = 1012

 Score = 33.1 bits (66), Expect = 1.8
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +3 / -1

                                           
Query: 90  IDPPLPVVLGITCSFLKRIQARPDSD*EFRSH 185
           ID PLP   GITC    R+Q RP    + R+H
Sbjct: 670 IDSPLPGRHGITCRCCSRVQERPKMIKKCRTH 575

>LOC_Os12g12080:12012.t01078:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed|
          Length = 13894

 Score = 32.2 bits (64), Expect(2) = 2.0
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -1 / -2

                                              
Query: 641  FFFFFSVLDPGTGPLQRPKGGQTRSPFQFSLLLS 540
            FFFFF VLD          GG+ R  F F LLL+
Sbjct: 3852 FFFFFLVLDQWA*NSGEKNGGRDRKRF*FKLLLN 3751



 Score = 24.0 bits (46), Expect(2) = 2.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1 / -3

                        
Query: 380 RPCLYMFPSTQHP 342
           R C  +FPST HP
Sbjct: 311 RRCRVVFPSTAHP 273

>LOC_Os09g17810:12009.t01566:unspliced-genomic expressed protein|
          Length = 2176

 Score = 32.7 bits (65), Expect = 2.5
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1 / -1

                               
Query: 529  CSMTLNKRENWKGERVWPP 585
            C+ TL  R NWKG R +PP
Sbjct: 1408 CNATLGPRWNWKGRRQFPP 1352

>LOC_Os06g08450:12006.t00724:unspliced-genomic response regulator receiver domain containing protein|
          Length = 8126

 Score = 32.7 bits (65), Expect = 2.5
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +3 / +1

                                                  
Query: 42   FDGSDLLDPTLNCWVRIDPPLPVVLGITCSFLKRIQAR 155
            F  S  L P+L  W R DPP  +V+ I  S  +R  AR
Sbjct: 6964 FGWSQELSPSLLHWRRRDPPAMIVMSIDASAPRRWSAR 7077

>LOC_Os01g09360:12001.t00814:unspliced-genomic hypothetical protein|
          Length = 767

 Score = 32.7 bits (65), Expect = 2.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3 / -1

                                    
Query: 567 ALPVLSFVKCHGTRSAVL*KAKRPC 493
           ALPV + ++CHGT +    K + PC
Sbjct: 548 ALPVRAHLRCHGTAAVAATKRRHPC 474

>LOC_Os01g59350:12001.t05325:unspliced-genomic transcription factor HBP-1b, putative, expressed|
          Length = 6803

 Score = 26.3 bits (51), Expect(2) = 3.2
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -1 / -2

                                                    
Query: 422  LTCALHFLKVDTQPRPCLYMFPSTQHPAMIEARYPNS*VT 303
            +T  +H+L +       +Y+FP T  P   +   P   VT
Sbjct: 6547 ITLEIHYLTISYLRINSIYLFPWTGEPKRTQGTKPGEVVT 6428



 Score = 23.1 bits (44), Expect(2) = 3.2
 Identities = 6/24 (25%), Positives = 13/24 (54%)
 Frame = -2 / -2

                                    
Query: 217  QHKYECSRLRVCERNS*SLSGLAW 146
            +H+Y   ++ +C RN      ++W
Sbjct: 6334 RHRYSSPKVTICNRNIHFSMSISW 6263

>LOC_Os05g50890:12005.t04519:unspliced-genomic indole-3-acetic acid-amido synthetase GH3.5, putative, expressed|
          Length = 5520

 Score = 32.2 bits (64), Expect = 3.5
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = -2 / +3

                                          
Query: 112  TTGRGGSMRTQQLSVGSSKSLPSKRN*LIA 23
            T  RG S R+  LS GSS+  PS+R+*+I+
Sbjct: 5049 TRARGRSRRSAPLSSGSSEREPSRRS*IIS 5138

>LOC_Os08g06070:12008.t00498:unspliced-genomic ELF7, putative, expressed|
          Length = 5105

 Score = 26.3 bits (51), Expect(2) = 4.3
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = -1 / -3

                                                   
Query: 458  TELTNMKGPPIALTCALHFLKVDTQPRPCLYMFPSTQHP 342
            TE    +    AL C L   K  + P    Y+F ST HP
Sbjct: 4710 TETKVFRSSYTALFCILCTSKFSSCPEAPRYVFSSTLHP 4594



 Score = 22.6 bits (43), Expect(2) = 4.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2 / -3

                               
Query: 238  ST*TGDSQHKYECSRLRVC 182
            +T  G + HKYE   + VC
Sbjct: 4590 TTYKGTTAHKYEIFEIHVC 4534

>LOC_Os06g23290:12006.t02141:unspliced-genomic phosphatidylinositol 3- and 4-kinase family protein, expressed|
          Length = 2967

 Score = 31.8 bits (63), Expect = 4.8
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +1 / -3

                                               
Query: 520 RTSCSMTLNKRENWKGERVWPPFGRWSGPVPGSSTE 627
           RT+   T  +R  W GE+  PP G W      SS E
Sbjct: 988 RTNSGATGCRRSRWAGEQTLPPSG*WQWQQTTSSQE 881

>LOC_Os01g43140:12001.t03830:unspliced-genomic triacylglycerol lipase, putative, expressed|
          Length = 3798

 Score = 29.0 bits (57), Expect(2) = 5.2
 Identities = 15/53 (28%), Positives = 21/53 (39%)
 Frame = -3 / +3

                                                                 
Query: 267  RHPNKSYNNKAPEQGTVNINTSARDCGCVSETPNRCPALLGCVSETNK*SPKP 109
            R P+ +  + A   G    +   R  G    +   CPA  GC S   + SP P
Sbjct: 3228 RAPSSATTSPATTSGRSTRSPGCRAAGSSRRSCGSCPASSGCSSIGGRGSPAP 3386



 Score = 24.0 bits (46), Expect(2) = 5.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2 / +3

                          
Query: 493  HMVSWFCQESTTQS 452
            ++ SWFC+E  +QS
Sbjct: 1659 NLESWFCKEMNSQS 1700

>LOC_Os05g37390:12005.t03282:unspliced-genomic protein G10 homolog 2, putative, expressed|
          Length = 2517

 Score = 26.3 bits (51), Expect(2) = 6.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3 / -1

                              
Query: 219 VNINTSARDCGCVSETPNR 163
           VN N+  R C CV   P+R
Sbjct: 234 VNANSKERGCACVGTGPHR 178



 Score = 25.8 bits (50), Expect(2) = 6.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3 / -1

                       
Query: 591 TKGWPDPFALPV 556
           TK WP+ FALP+
Sbjct: 648 TKDWPESFALPL 613

>LOC_Os10g23160:12010.t01793:unspliced-genomic ent-kaurenoic acid oxidase 1, putative|
          Length = 1257

 Score = 31.3 bits (62), Expect = 6.6
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -3 / +1

                                   
Query: 585 GWPDPFALPVLSFVKCHGTRSAVL 514
           GWPDP  + V S V  HG R A L
Sbjct: 427 GWPDPELVGVSSIVNVHGGRHARL 498

>LOC_Os10g18670:12010.t01415:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 6154

 Score = 31.3 bits (62), Expect = 6.6
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -1 / +1

                                        
Query: 209 IRVLATAGV*AKLLIAVRPCLDAFQKRTS 123
           +R LATA + AK+L+ V P LD+F+ R +
Sbjct: 397 MRELATARLVAKVLLDVGPTLDSFEPRAN 483

>LOC_Os06g41220:12006.t03816:unspliced-genomic hypothetical protein|
          Length = 2198

 Score = 31.3 bits (62), Expect = 6.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3 / -3

                                           
Query: 282  LVSNSRHPNKSYNNKAPEQGTVNINTSARDC 190
            L+S++ HP        P    +++ TSARDC
Sbjct: 1392 LISHAAHPGSHPGATGPSVRPISVKTSARDC 1300

>LOC_Os04g12440:12004.t01068:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 4285

 Score = 31.3 bits (62), Expect = 6.6
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -1 / +3

                                        
Query: 209 IRVLATAGV*AKLLIAVRPCLDAFQKRTS 123
           +R LATA + AK+L+ V P LD+F+ R +
Sbjct: 519 MRELATARLVAKVLLDVGPTLDSFEPRAN 605

>LOC_Os06g40880:12006.t03783:unspliced-genomic polygalacturonase precursor, putative, expressed|
          Length = 2342

 Score = 30.9 bits (61), Expect = 9.0
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = -1 / +3

                                                                  
Query: 308  VTLKIEDASWSPTRGILINPIITKHLNRGQST*IRVLATAGV*AKLLIAVRPCL 147
            V +K+  ++ SP RG+ +  I  +++ RG +T  R    AG  A   +   PC+
Sbjct: 2013 VAVKLSCSAASPCRGVELRDIDLRYVRRGVATVSRCANVAGGVAGGTLVPPPCI 2174

>LOC_Os04g49220:12004.t04438:unspliced-genomic tim10/DDP family zinc finger containing protein|
          Length = 5344

 Score = 30.9 bits (61), Expect = 9.0
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1 / +3

                                
Query: 541  LNKRENWKGERVWPPFGRWS 600
            L +R  W   R WP  G WS
Sbjct: 5013 LGRRRRWPSRRAWPEHGPWS 5072

>LOC_Os02g06910:12002.t00588:unspliced-genomic auxin response factor 6, putative, expressed|
          Length = 6095

 Score = 30.9 bits (61), Expect = 9.0
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +1 / +3

                                
Query: 532 SMTLNKRENWKGERVWPPFGR 594
           S+ + K   W+G++VWP +GR
Sbjct: 522 SLGIEKVAGWRGKKVWPVWGR 584


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 295,968,659
Number of extensions: 5142136
Number of successful extensions: 16407
Number of sequences better than 10.0: 23
Length of query: 213
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 165
Effective length of database: 52,912,542
Effective search space: 8730569430
Effective search space used: 8730569430
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)