ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf85m15 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK103162:Os03g0288000 | 60 | 7e-10 | 2 | AK059587:Os03g0288000 | 60 | 7e-10 | 3 | Os12g0567800:Os12g0567800 | 55 | 2e-08 | 4 | U43529:Os11g0704500 | 54 | 5e-08 | 5 | AY491534:Os11g0704500 | 54 | 5e-08 | 6 | AK120630:Os11g0704500 | 54 | 5e-08 | 7 | AK119726:Os11g0704500 | 54 | 5e-08 | 8 | AK062653:Os11g0704500 | 54 | 5e-08 | 9 | AF017366:Os11g0704500 | 54 | 5e-08 | 10 | Os12g0568500:Os12g0568500 | 53 | 1e-07 | 11 | Os12g0568200:Os12g0568200 | 53 | 1e-07 | 12 | AK103445:Os12g0570700 | 53 | 1e-07 | 13 | Os12g0571000:Os12g0571000 | 53 | 1e-07 | 14 | AK105219:Os12g0571100 | 50 | 7e-07 | 15 | U43530:Os01g0149800 | 32 | 0.25 | 16 | AK069318:Os01g0149200 | 29 | 2.1 | 17 | AK120350:Os01g0200700 | 28 | 3.6 | 18 | AK058313:Os01g0200700 | 28 | 3.6 | 19 | AF147786:Os01g0200700 | 28 | 3.6 | 20 | AF001396:Os01g0200700 | 28 | 3.6 | 21 | AK101719:Os08g0177300 | 27 | 8.0 | 22 | AK063414:Os08g0177300 | 27 | 8.0 |
|---|
>AK103162:Os03g0288000 | Length = 72 Score = 60.5 bits (145), Expect = 7e-10 Identities = 32/46 (69%), Positives = 33/46 (71%) Frame = +1 Query: 121 KMYPDLEEKSGAIMQATAVVLGVGPAKVQFEEAAESDEAGHGCSCG 258 KMYPDLEEKS + QAT VVLGV P K FE AAES E HGC CG Sbjct: 19 KMYPDLEEKSSSA-QAT-VVLGVAPEKAHFEAAAESGETAHGCGCG 62
>AK059587:Os03g0288000 | Length = 72 Score = 60.5 bits (145), Expect = 7e-10 Identities = 32/46 (69%), Positives = 33/46 (71%) Frame = +1 Query: 121 KMYPDLEEKSGAIMQATAVVLGVGPAKVQFEEAAESDEAGHGCSCG 258 KMYPDLEEKS + QAT VVLGV P K FE AAES E HGC CG Sbjct: 19 KMYPDLEEKSSSA-QAT-VVLGVAPEKAHFEAAAESGETAHGCGCG 62
>Os12g0567800:Os12g0567800 | Length = 78 Score = 55.5 bits (132), Expect = 2e-08 Identities = 29/49 (59%), Positives = 30/49 (61%), Gaps = 3/49 (6%) Frame = +1 Query: 121 KMYPDLEEKSGAIMQATAVVLGVGPAKVQFE---EAAESDEAGHGCSCG 258 KMYPDL EK T VLGV P K QFE +AAES E HGCSCG Sbjct: 20 KMYPDLAEKITITTTTTTTVLGVAPEKGQFEGVGKAAESGEGAHGCSCG 68
>U43529:Os11g0704500 | Length = 74 Score = 54.3 bits (129), Expect = 5e-08 Identities = 30/48 (62%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Frame = +1 Query: 121 KMYPDLEEKSGAIMQATAVVLGVGPAKV--QFEEAAESDEAGHGCSCG 258 K YPDLEEKS + VVLGV P K QFE AAES E HGCSCG Sbjct: 19 KKYPDLEEKSSSTK--ATVVLGVAPEKKAQQFEAAAESGETAHGCSCG 64
>AY491534:Os11g0704500 | Length = 74 Score = 54.3 bits (129), Expect = 5e-08 Identities = 30/48 (62%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Frame = +1 Query: 121 KMYPDLEEKSGAIMQATAVVLGVGPAKV--QFEEAAESDEAGHGCSCG 258 K YPDLEEKS + VVLGV P K QFE AAES E HGCSCG Sbjct: 19 KKYPDLEEKSSSTK--ATVVLGVAPEKKAQQFEAAAESGETAHGCSCG 64
>AK120630:Os11g0704500 | Length = 74 Score = 54.3 bits (129), Expect = 5e-08 Identities = 30/48 (62%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Frame = +1 Query: 121 KMYPDLEEKSGAIMQATAVVLGVGPAKV--QFEEAAESDEAGHGCSCG 258 K YPDLEEKS + VVLGV P K QFE AAES E HGCSCG Sbjct: 19 KKYPDLEEKSSSTK--ATVVLGVAPEKKAQQFEAAAESGETAHGCSCG 64
>AK119726:Os11g0704500 | Length = 74 Score = 54.3 bits (129), Expect = 5e-08 Identities = 30/48 (62%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Frame = +1 Query: 121 KMYPDLEEKSGAIMQATAVVLGVGPAKV--QFEEAAESDEAGHGCSCG 258 K YPDLEEKS + VVLGV P K QFE AAES E HGCSCG Sbjct: 19 KKYPDLEEKSSSTK--ATVVLGVAPEKKAQQFEAAAESGETAHGCSCG 64
>AK062653:Os11g0704500 | Length = 74 Score = 54.3 bits (129), Expect = 5e-08 Identities = 30/48 (62%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Frame = +1 Query: 121 KMYPDLEEKSGAIMQATAVVLGVGPAKV--QFEEAAESDEAGHGCSCG 258 K YPDLEEKS + VVLGV P K QFE AAES E HGCSCG Sbjct: 19 KKYPDLEEKSSSTK--ATVVLGVAPEKKAQQFEAAAESGETAHGCSCG 64
>AF017366:Os11g0704500 | Length = 74 Score = 54.3 bits (129), Expect = 5e-08 Identities = 30/48 (62%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Frame = +1 Query: 121 KMYPDLEEKSGAIMQATAVVLGVGPAKV--QFEEAAESDEAGHGCSCG 258 K YPDLEEKS + VVLGV P K QFE AAES E HGCSCG Sbjct: 19 KKYPDLEEKSSSTK--ATVVLGVAPEKKAQQFEAAAESGETAHGCSCG 64
>Os12g0568500:Os12g0568500 | Length = 79 Score = 53.1 bits (126), Expect = 1e-07 Identities = 27/50 (54%), Positives = 29/50 (58%), Gaps = 4/50 (8%) Frame = +1 Query: 121 KMYPDLEEKSGAIMQATAVVLGVGPAKVQFE----EAAESDEAGHGCSCG 258 KMYPDL EK + VLGV P K FE +A ES EA HGCSCG Sbjct: 20 KMYPDLAEKINTTITTATTVLGVAPEKGHFEVMVGKAGESGEAAHGCSCG 69
>Os12g0568200:Os12g0568200 | Length = 79 Score = 53.1 bits (126), Expect = 1e-07 Identities = 28/50 (56%), Positives = 29/50 (58%), Gaps = 4/50 (8%) Frame = +1 Query: 121 KMYPDLEEKSGAIMQATAVVLGVGPAKVQFE----EAAESDEAGHGCSCG 258 KMYPDL EK VLGV P K FE +AAES EA HGCSCG Sbjct: 20 KMYPDLAEKITTTTTTATTVLGVAPEKGHFEVMVGKAAESGEAAHGCSCG 69
>AK103445:Os12g0570700 | Length = 78 Score = 53.1 bits (126), Expect = 1e-07 Identities = 29/48 (60%), Positives = 33/48 (68%), Gaps = 3/48 (6%) Frame = +1 Query: 124 MYPDLEEKSGAIMQATAVVLGVGPAKVQFE---EAAESDEAGHGCSCG 258 MYPDL EK+ + +VLGV PAK QFE +AAES EA HGCSCG Sbjct: 23 MYPDLAEKT--TNTSATMVLGVAPAKEQFEGVGKAAESGEAAHGCSCG 68
>Os12g0571000:Os12g0571000 | Length = 76 Score = 52.8 bits (125), Expect = 1e-07 Identities = 27/50 (54%), Positives = 31/50 (62%), Gaps = 4/50 (8%) Frame = +1 Query: 121 KMYPDLEEKSGAIMQATAVVLGVGPAK----VQFEEAAESDEAGHGCSCG 258 KMYPDL EK+ I + ++LGV P K FE AA S EA HGCSCG Sbjct: 17 KMYPDLAEKNTTITTSDTMILGVAPEKGRGEAVFEAAAGSGEADHGCSCG 66
>AK105219:Os12g0571100 | Length = 78 Score = 50.4 bits (119), Expect = 7e-07 Identities = 27/49 (55%), Positives = 28/49 (57%), Gaps = 3/49 (6%) Frame = +1 Query: 121 KMYPDLEEKSGAIMQATAVVLGVGPAKVQFE---EAAESDEAGHGCSCG 258 KMYPDL EK VLGV P K E +AAES EA HGCSCG Sbjct: 20 KMYPDLAEKITTTTTTATTVLGVAPEKGHSEGVGKAAESGEAAHGCSCG 68
>U43530:Os01g0149800 | Length = 82 Score = 32.0 bits (71), Expect = 0.25 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%) Frame = +1 Query: 121 KMYPDLEEKSGAIMQATAVVLGVGPAKVQFE--EAAESDEAG--HGCSCG 258 KMYP++ E+ + V++GV P+K E EA + AG +GC CG Sbjct: 24 KMYPEMAEE---VTTTQTVIMGVAPSKGHAEGLEAGAAAGAGAENGCKCG 70
>AK069318:Os01g0149200 | Length = 64 Score = 28.9 bits (63), Expect = 2.1 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%) Frame = +1 Query: 124 MYPDLEEKSGAIMQATAVVLGVGPAKVQFE--EAAESDEAG--HGCSCG 258 MYP + E+ + V++GV P+K E EA + AG +GC CG Sbjct: 1 MYPGMAEE---VTTTQTVIMGVAPSKGHAEGLEAGAAAGAGAENGCKCG 46
>AK120350:Os01g0200700 | Length = 62 Score = 28.1 bits (61), Expect = 3.6 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = +1 Query: 133 DLEEKSGAIMQATAV-VLGVGPAKVQFEEAAESDEAGHGCSCG 258 D +KS + + T+ V+ V K FEE A +E G GC CG Sbjct: 9 DCADKSQCVKKGTSYGVVIVEAEKSHFEEVAAGEENG-GCKCG 50
>AK058313:Os01g0200700 | Length = 62 Score = 28.1 bits (61), Expect = 3.6 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = +1 Query: 133 DLEEKSGAIMQATAV-VLGVGPAKVQFEEAAESDEAGHGCSCG 258 D +KS + + T+ V+ V K FEE A +E G GC CG Sbjct: 9 DCADKSQCVKKGTSYGVVIVEAEKSHFEEVAAGEENG-GCKCG 50
>AF147786:Os01g0200700 | Length = 62 Score = 28.1 bits (61), Expect = 3.6 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = +1 Query: 133 DLEEKSGAIMQATAV-VLGVGPAKVQFEEAAESDEAGHGCSCG 258 D +KS + + T+ V+ V K FEE A +E G GC CG Sbjct: 9 DCADKSQCVKKGTSYGVVIVEAEKSHFEEVAAGEENG-GCKCG 50
>AF001396:Os01g0200700 | Length = 62 Score = 28.1 bits (61), Expect = 3.6 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = +1 Query: 133 DLEEKSGAIMQATAV-VLGVGPAKVQFEEAAESDEAGHGCSCG 258 D +KS + + T+ V+ V K FEE A +E G GC CG Sbjct: 9 DCADKSQCVKKGTSYGVVIVEAEKSHFEEVAAGEENG-GCKCG 50
>AK101719:Os08g0177300 | Length = 1259 Score = 26.9 bits (58), Expect = 8.0 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +1 Query: 130 PDLEEKSGAIMQATAVVLGVGPAKVQFEEAAESDEAGHGCS 252 PD K A+M ++ EEA ++EAG+GCS Sbjct: 304 PDTSPKEAALMATSSFPSSCNEV---LEEACAAEEAGNGCS 341
>AK063414:Os08g0177300 | Length = 956 Score = 26.9 bits (58), Expect = 8.0 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +1 Query: 130 PDLEEKSGAIMQATAVVLGVGPAKVQFEEAAESDEAGHGCS 252 PD K A+M ++ EEA ++EAG+GCS Sbjct: 304 PDTSPKEAALMATSSFPSSCNEV---LEEACAAEEAGNGCS 341 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 10,704,425 Number of extensions: 163711 Number of successful extensions: 443 Number of sequences better than 10.0: 22 Number of HSP's gapped: 432 Number of HSP's successfully gapped: 22 Length of query: 174 Length of database: 15,399,855 Length adjustment: 94 Effective length of query: 80 Effective length of database: 11,636,001 Effective search space: 930880080 Effective search space used: 930880080 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
