ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf85l21 |
|---|---|
| Clone Library Name | barley_pub |
>Q84J78:SSB_ARATH Single-stranded DNA-binding protein, mitochondrial precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 201 Score = 100 bits (249), Expect = 9e-21 Identities = 50/128 (39%), Positives = 82/128 (64%) Frame = +2 Query: 251 PHTTRPLENGLDHGIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEE 430 PH P + G+++AI+ GKVGQ P+QK LR+G+TV +F++GTGG+ + R + Sbjct: 57 PHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLVGATNQ 116 Query: 431 PHQYAERSSVQWHRVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIRE 610 P QWHR+ ++ + LGS A++ + S +Y+EG++ET+V++D I+ V+ I E Sbjct: 117 P------KPAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPE 170 Query: 611 IAVRGNGR 634 I VR +G+ Sbjct: 171 ICVRRDGK 178
>Q8D254:SSB_WIGBR Single-stranded DNA-binding protein - Wigglesworthia glossinidia| brevipalpis Length = 163 Score = 65.9 bits (159), Expect = 2e-10 Identities = 42/121 (34%), Positives = 65/121 (53%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 GI K I++G +GQ+P + + +G + SL T N R + E + +WH Sbjct: 5 GINKVILIGNLGQDPEVRYIPNGNAITNLSLATS---ENWRDKNTGE-----SKEKTEWH 56 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFLG 649 RV ++ +L +A +++K GS +Y+EGNL+T+ + D G R I EI V NG LG Sbjct: 57 RVILF-GKLAEVAGEYLKKGSQVYIEGNLQTRKWQDQ-NGQDRYITEIVVGINGCMQMLG 114 Query: 650 N 652 N Sbjct: 115 N 115
>P57610:SSB_BUCAI Single-stranded DNA-binding protein - Buchnera aphidicola subsp.| Acyrthosiphon pisum (Acyrthosiphon pisum symbiotic bacterium) Length = 171 Score = 63.9 bits (154), Expect = 9e-10 Identities = 37/121 (30%), Positives = 66/121 (54%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 G+ K I++G +GQ+P + + +G VV +L T ++ +N+E +WH Sbjct: 5 GVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKE--------KTEWH 56 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFLG 649 R+ ++ +L +A ++++ GS +Y+EG+L+T+ + D GL R EI V G LG Sbjct: 57 RIVLF-GKLAEIAGEYLRKGSQVYIEGSLQTRKWQDQ-NGLERYTTEIIVNIGGTMQMLG 114 Query: 650 N 652 N Sbjct: 115 N 115
>Q8K933:SSB_BUCAP Single-stranded DNA-binding protein - Buchnera aphidicola subsp.| Schizaphis graminum Length = 162 Score = 63.5 bits (153), Expect = 1e-09 Identities = 36/121 (29%), Positives = 66/121 (54%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 G+ K I++G +GQ+P + + +G VV +L T ++ +N+E +WH Sbjct: 5 GVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKE--------KTEWH 56 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFLG 649 R+ ++ +L +A ++++ GS +Y+EG+L+T+ + D GL R E+ V G LG Sbjct: 57 RIVLF-GKLAEIAGEYLRKGSQVYIEGSLQTRKWQDQ-NGLERYTTEVIVNIGGTMQMLG 114 Query: 650 N 652 N Sbjct: 115 N 115
>Q9RHF4:SSB2_SALTI Single-stranded DNA-binding protein 2 - Salmonella typhi| Length = 178 Score = 63.5 bits (153), Expect = 1e-09 Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 3/132 (2%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 G+ K I+VG +GQ+P + + +G VV SL T +++ D +E +WH Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVVNLSLATSDTWTDKQTGDKKE--------RTEWH 56 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFLG 649 RV +Y +L +A ++++ GS +Y+EG L T+ ++D +G+ + E+ V +G LG Sbjct: 57 RVVLY-GKLAEIASEYLRKGSQVYIEGALRTRKWTDQ-SGVEKYTTEVVVSQSGTMQMLG 114 Query: 650 ---NDGNGPKIG 676 + G+G + G Sbjct: 115 GRNSAGSGQQQG 126
>Q98M41:SSB_RHILO Single-stranded DNA-binding protein - Rhizobium loti (Mesorhizobium| loti) Length = 172 Score = 60.5 bits (145), Expect = 1e-08 Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 2/136 (1%) Frame = +2 Query: 293 IYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWHR 472 + K I+VG +G +P +RL SG+ VV + T ++ + +E +WH Sbjct: 5 VNKVILVGNLGADPEIRRLNSGEPVVNIRIATSESWRDKNSGERKE--------KTEWHN 56 Query: 473 VCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAV-RGNGRFLFL- 646 V I+ + + +A +++K G +Y+EG L+T+ + D TG + E+ + R G L Sbjct: 57 VVIFNEGIAKVAEQYLKKGMKVYVEGQLQTRKWQDQ-TGADKYTTEVVLQRFRGELQMLD 115 Query: 647 GNDGNGPKIGEVKGVG 694 G G G ++G G G Sbjct: 116 GRQGEGGQVGGYSGGG 131
>Q8L2A6:SSB_PROVU Single-stranded DNA-binding protein - Proteus vulgaris| Length = 195 Score = 60.5 bits (145), Expect = 1e-08 Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 5/140 (3%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 G+ K I+VG VGQ+P + + +G V +L T +++ +++E +WH Sbjct: 5 GVNKVILVGNVGQDPEVRYMPNGGAVANLTLATSETWRDKQTGESKE--------KTEWH 56 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFL- 646 RV ++ +L + + VK GS +Y+EG L+T+ ++D G+ + E+ V G L Sbjct: 57 RVVLF-GKLAEITGEFVKKGSQIYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQMLG 114 Query: 647 ----GNDGNGPKIGEVKGVG 694 GND G +G G Sbjct: 115 GRQGGNDNQNNNAGSNQGWG 134
>P25762:SSB_SERMA Single-stranded DNA-binding protein - Serratia marcescens| Length = 176 Score = 59.3 bits (142), Expect = 2e-08 Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 1/134 (0%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 G+ K I+VG +GQ+P + + +G V +L T ++ + +E +WH Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKE--------KTEWH 56 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFL- 646 RV ++ +L +A ++++ GS +Y+EG+L+T+ + D +G R EI V G L Sbjct: 57 RVVLF-GKLAEVAGEYLRKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEIVVNVGGTMQMLG 114 Query: 647 GNDGNGPKIGEVKG 688 G G G G+ G Sbjct: 115 GRQGGGAPAGQSAG 128
>Q8DCJ0:SSB_VIBVU Single-stranded DNA-binding protein - Vibrio vulnificus| Length = 179 Score = 58.2 bits (139), Expect = 5e-08 Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 4/133 (3%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 GI K I+VG +G +P + + SG V ++ T R EP R +WH Sbjct: 5 GINKVILVGNLGNDPEIRYMPSGGAVANITVATS---ETWRDKATGEP-----REKTEWH 56 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRG-NGRFLFL 646 RV +Y +L +A ++++ GS +Y+EG L+T+ + D G R E+ V+G NG L Sbjct: 57 RVTLY-GKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-NGQDRYSTEVVVQGYNGIMQML 114 Query: 647 G---NDGNGPKIG 676 G G P +G Sbjct: 115 GGRQQQGGAPAMG 127
>Q68Y11:SSB_RICTY Single-stranded DNA-binding protein - Rickettsia typhi| Length = 152 Score = 58.2 bits (139), Expect = 5e-08 Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 1/119 (0%) Frame = +2 Query: 299 KAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWHRVC 478 K I++G VG++P + GK ++ SL T +R + +E +WHRV Sbjct: 7 KVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSERKE--------RTEWHRVV 58 Query: 479 IYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRG-NGRFLFLGN 652 I+ + L S+ ++V GS LY+EG+L+T+ ++D +G + E+ ++ N + + L N Sbjct: 59 IFSEGLVSIVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILLDN 116
>Q89L50:SSB_BRAJA Single-stranded DNA-binding protein - Bradyrhizobium japonicum| Length = 164 Score = 58.2 bits (139), Expect = 5e-08 Identities = 33/125 (26%), Positives = 67/125 (53%), Gaps = 1/125 (0%) Frame = +2 Query: 293 IYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWHR 472 + K I+VG +G++P +R + G+ + S+ T ++ + +E +WHR Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKNSGERKE--------KTEWHR 56 Query: 473 VCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRG-NGRFLFLG 649 V I+ + L +A +++K G+ +Y+EG L+T+ ++D +G+ + E+ ++G N L Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWTDQ-SGVEKYSTEVVLQGFNSTLTMLD 115 Query: 650 NDGNG 664 G G Sbjct: 116 GRGGG 120
>Q9KUW2:SSB_VIBCH Single-stranded DNA-binding protein - Vibrio cholerae| Length = 177 Score = 57.8 bits (138), Expect = 7e-08 Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 1/121 (0%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 G+ K I++G +GQ+P + + SG V ++ T ++ + +E +WH Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKE--------KTEWH 56 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRG-NGRFLFL 646 RV +Y +L +A ++++ GS +Y+EG L+T+ + D +G R E+ V+G NG L Sbjct: 57 RVTLY-GKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQGYNGIMQML 114 Query: 647 G 649 G Sbjct: 115 G 115
>P0AGE3:SSB_SHIFL Single-stranded DNA-binding protein - Shigella flexneri| Length = 178 Score = 57.8 bits (138), Expect = 7e-08 Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 2/135 (1%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 G+ K I+VG +GQ+P + + +G V +L T ++ + +E +WH Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKE--------QTEWH 56 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFLG 649 RV ++ +L +A ++++ GS +Y+EG L T+ ++D +G R E+ V G LG Sbjct: 57 RVVLF-GKLAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGTMQMLG 114 Query: 650 --NDGNGPKIGEVKG 688 G P G + G Sbjct: 115 GRQGGGAPAGGNIGG 129
>Q92G30:SSB_RICCN Single-stranded DNA-binding protein - Rickettsia conorii| Length = 152 Score = 57.8 bits (138), Expect = 7e-08 Identities = 30/93 (32%), Positives = 52/93 (55%) Frame = +2 Query: 299 KAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWHRVC 478 K I++G VG++P + GK ++ SL T +R + +E +WHRV Sbjct: 7 KVILIGNVGRDPEMRTTGEGKKIINLSLATTETWKDRITSERKE--------RTEWHRVV 58 Query: 479 IYPDRLGSLALKHVKTGSVLYLEGNLETKVFSD 577 I+ + L S+ ++V GS LY+EG+L+T+ ++D Sbjct: 59 IFSEGLVSVVERYVTKGSKLYIEGSLQTRKWND 91
>Q88QK5:SSB_PSEPK Single-stranded DNA-binding protein - Pseudomonas putida (strain| KT2440) Length = 181 Score = 57.8 bits (138), Expect = 7e-08 Identities = 40/129 (31%), Positives = 65/129 (50%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 G+ K I+VG GQ+P + L +G V SL T +++ Q ER+ +WH Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATS------EQWTDKQSGQKVERT--EWH 55 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFLG 649 RV ++ ++ +A ++++ GS Y+EG L+T+ + G+ R EI V NG LG Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQCYIEGKLQTREWEK--DGIKRYTTEIIVDINGTMQLLG 112 Query: 650 NDGNGPKIG 676 G + G Sbjct: 113 GRPQGQQQG 121
>P0AGE0:SSB_ECOLI Single-stranded DNA-binding protein - Escherichia coli| Length = 178 Score = 57.8 bits (138), Expect = 7e-08 Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 2/135 (1%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 G+ K I+VG +GQ+P + + +G V +L T ++ + +E +WH Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKE--------QTEWH 56 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFLG 649 RV ++ +L +A ++++ GS +Y+EG L T+ ++D +G R E+ V G LG Sbjct: 57 RVVLF-GKLAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGTMQMLG 114 Query: 650 --NDGNGPKIGEVKG 688 G P G + G Sbjct: 115 GRQGGGAPAGGNIGG 129
>P0AGE1:SSB_ECOL6 Single-stranded DNA-binding protein - Escherichia coli O6| Length = 178 Score = 57.8 bits (138), Expect = 7e-08 Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 2/135 (1%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 G+ K I+VG +GQ+P + + +G V +L T ++ + +E +WH Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKE--------QTEWH 56 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFLG 649 RV ++ +L +A ++++ GS +Y+EG L T+ ++D +G R E+ V G LG Sbjct: 57 RVVLF-GKLAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGTMQMLG 114 Query: 650 --NDGNGPKIGEVKG 688 G P G + G Sbjct: 115 GRQGGGAPAGGNIGG 129
>P0AGE2:SSB_ECO57 Single-stranded DNA-binding protein - Escherichia coli O157:H7| Length = 178 Score = 57.8 bits (138), Expect = 7e-08 Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 2/135 (1%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 G+ K I+VG +GQ+P + + +G V +L T ++ + +E +WH Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKE--------QTEWH 56 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFLG 649 RV ++ +L +A ++++ GS +Y+EG L T+ ++D +G R E+ V G LG Sbjct: 57 RVVLF-GKLAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGTMQMLG 114 Query: 650 --NDGNGPKIGEVKG 688 G P G + G Sbjct: 115 GRQGGGAPAGGNIGG 129
>Q8UF87:SSB_AGRT5 Single-stranded DNA-binding protein - Agrobacterium tumefaciens| (strain C58 / ATCC 33970) Length = 173 Score = 57.8 bits (138), Expect = 7e-08 Identities = 39/136 (28%), Positives = 66/136 (48%) Frame = +2 Query: 293 IYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWHR 472 + K I++G VG +P +R + G+ + + T +R + +E +WH Sbjct: 5 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERKE--------KTEWHT 56 Query: 473 VCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFLGN 652 V ++ + L + ++VK G+ LY+EG L+T+ + D TG R EI ++G L + Sbjct: 57 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-TGNDRYSTEIVLQGFNSTLTM-L 114 Query: 653 DGNGPKIGEVKGVGYF 700 DG G G G G F Sbjct: 115 DGRGEGGGGRSGGGDF 130
>Q8EA81:SSB_SHEON Single-stranded DNA-binding protein - Shewanella oneidensis| Length = 238 Score = 57.4 bits (137), Expect = 9e-08 Identities = 33/125 (26%), Positives = 65/125 (52%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 G+ K I+VG +GQ+P + + +G V ++ T ++ + Q ++ +WH Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGNAVANITVATS---------ESWKDQQGQQQERTEWH 55 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFLG 649 RV ++ +L + ++++ GS +YLEG L+T+ + D +G R E+ + +G LG Sbjct: 56 RVVLF-GKLAEITGEYLRKGSQVYLEGKLQTRKWKDQ-SGQDRYSTEVVIDQSGSMQMLG 113 Query: 650 NDGNG 664 + G Sbjct: 114 SRNQG 118
>Q1RK72:SSB_RICBR Single-stranded DNA-binding protein - Rickettsia bellii (strain| RML369-C) Length = 150 Score = 57.4 bits (137), Expect = 9e-08 Identities = 36/121 (29%), Positives = 63/121 (52%) Frame = +2 Query: 299 KAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWHRVC 478 K ++G +G++P + GK + SL T I +R + +E +WHRV Sbjct: 7 KVTLIGNLGRDPEIRTTGEGKEIANLSLATTDIWKDRVTGEKKE--------KTEWHRVV 58 Query: 479 IYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFLGNDG 658 I+ + L S+ +VK GS LY+EG+L+T+ ++D +G+ + EI ++ L L + Sbjct: 59 IFNEGLVSVVKNYVKKGSKLYIEGSLQTRKWNDS-SGVEKYTTEIVLQNFNSQLILLDSK 117 Query: 659 N 661 N Sbjct: 118 N 118
>Q9A894:SSB_CAUCR Single-stranded DNA-binding protein - Caulobacter crescentus| (Caulobacter vibrioides) Length = 167 Score = 57.4 bits (137), Expect = 9e-08 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 1/135 (0%) Frame = +2 Query: 293 IYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWHR 472 + K I+VG +G +P + L SG V + T +R + +E +WHR Sbjct: 5 VNKVILVGNLGADPEIRSLGSGDRVANLRIATSETWRDRSSGERKE--------KTEWHR 56 Query: 473 VCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAV-RGNGRFLFLG 649 V I+ D L +A ++++ GS +Y+EG L+T+ ++D TG + EI + + G LG Sbjct: 57 VVIFNDNLVKVAEQYLRKGSTVYIEGALQTRKWTDN-TGQEKYSTEIVLQKFRGELTMLG 115 Query: 650 NDGNGPKIGEVKGVG 694 G G G G G Sbjct: 116 --GRGGDAGMSSGGG 128
>Q8ZJ06:SSB_YERPE Single-stranded DNA-binding protein - Yersinia pestis| Length = 182 Score = 57.0 bits (136), Expect = 1e-07 Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 1/130 (0%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 G+ K I+VG +GQ+P + + +G V +L T +++ + +E +WH Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKE--------KTEWH 56 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFL- 646 RV ++ +L +A ++++ GS +Y+EG L+T+ + D +G R E+ V G L Sbjct: 57 RVVLF-GKLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQMLG 114 Query: 647 GNDGNGPKIG 676 G G G G Sbjct: 115 GRQGGGAPAG 124
>Q9ZCC2:SSB_RICPR Single-stranded DNA-binding protein - Rickettsia prowazekii| Length = 152 Score = 57.0 bits (136), Expect = 1e-07 Identities = 30/93 (32%), Positives = 52/93 (55%) Frame = +2 Query: 299 KAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWHRVC 478 K I++G VG++P + GK ++ SL T +R + +E +WHRV Sbjct: 7 KVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSERKE--------RTEWHRVV 58 Query: 479 IYPDRLGSLALKHVKTGSVLYLEGNLETKVFSD 577 I+ + L S+ ++V GS LY+EG+L+T+ ++D Sbjct: 59 IFSEGLVSIVERYVTKGSKLYIEGSLQTRKWND 91
>Q9ZAQ8:SSB_RHOS4 Single-stranded DNA-binding protein - Rhodobacter sphaeroides| (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) Length = 173 Score = 57.0 bits (136), Expect = 1e-07 Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 1/135 (0%) Frame = +2 Query: 293 IYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWHR 472 + K I++G +G++P + ++G VV + T +R + +E +WH Sbjct: 5 VNKVIIIGNLGRDPEVRSFQNGGKVVNLRIATSEQWRDRASGERKE--------RTEWHS 56 Query: 473 VCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRG-NGRFLFLG 649 V I+ + L +A ++++ GS +Y+EG LET+ + D +G R E+ +R LG Sbjct: 57 VAIFDENLARVAEQYLRKGSTVYIEGQLETRKWQDQ-SGQDRYSTEVVLRPFRSSLTMLG 115 Query: 650 NDGNGPKIGEVKGVG 694 G G G G G Sbjct: 116 GRGEGAGAGGGMGGG 130
>Q93GP7:SSB2_SALTY Single-stranded DNA-binding protein 2 - Salmonella typhimurium| Length = 172 Score = 57.0 bits (136), Expect = 1e-07 Identities = 36/127 (28%), Positives = 65/127 (51%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 G+ K I+VG +GQ+P + + +G V +L T R+ D E R +WH Sbjct: 5 GVNKVILVGHIGQDPEVRYMPNGGAVANLTLATSETWRVRQ--DGE------MREHTEWH 56 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFLG 649 RV ++ +L +A ++++ G+ +Y+EG L T+ ++D +G + E+ V G LG Sbjct: 57 RVVVF-GKLAEIASEYLRKGAQVYIEGQLRTRKWTDQ-SGQDKYTTEVIVNVGGTMQMLG 114 Query: 650 NDGNGPK 670 + P+ Sbjct: 115 RHNSQPQ 121
>Q4UJW3:SSB_RICFE Single-stranded DNA-binding protein - Rickettsia felis (Rickettsia| azadi) Length = 152 Score = 56.6 bits (135), Expect = 2e-07 Identities = 30/93 (32%), Positives = 52/93 (55%) Frame = +2 Query: 299 KAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWHRVC 478 K I++G VG++P + GK ++ SL T +R + +E +WHRV Sbjct: 7 KVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSERKE--------RTEWHRVV 58 Query: 479 IYPDRLGSLALKHVKTGSVLYLEGNLETKVFSD 577 I+ + L S+ ++V GS LY+EG+L+T+ ++D Sbjct: 59 IFSEGLVSVVERYVTKGSKLYIEGSLQTRKWND 91
>P56898:SSB_RHIME Single-stranded DNA-binding protein - Rhizobium meliloti| (Sinorhizobium meliloti) Length = 174 Score = 56.2 bits (134), Expect = 2e-07 Identities = 38/134 (28%), Positives = 65/134 (48%) Frame = +2 Query: 293 IYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWHR 472 + K I++G VG +P +R + G+ + + T +R + E +WH Sbjct: 5 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERRE--------KTEWHT 56 Query: 473 VCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFLGN 652 V ++ + L + ++VK G+ LY+EG L+T+ + D TG R E+ ++G L + Sbjct: 57 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-TGNDRYSTEVVLQGFNSTLTM-L 114 Query: 653 DGNGPKIGEVKGVG 694 DG G GE G G Sbjct: 115 DGRG---GEGGGAG 125
>Q87LA3:SSB_VIBPA Single-stranded DNA-binding protein - Vibrio parahaemolyticus| Length = 176 Score = 55.5 bits (132), Expect = 3e-07 Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 3/132 (2%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 GI K I+VG +G +P + + +G V ++ T ++ + +R +WH Sbjct: 5 GINKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGE--------QREKTEWH 56 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRG-NGRFLFL 646 RV ++ +L +A ++++ GS +Y+EG L+T+ + D +G R E+ V+G NG L Sbjct: 57 RVVLF-GKLAEVAGEYLRKGSQVYVEGQLQTRKWQDQ-SGQDRYSTEVVVQGFNGVMQML 114 Query: 647 GN--DGNGPKIG 676 G G P +G Sbjct: 115 GGRAQGGAPAMG 126
>Q04837:SSB_HUMAN Single-stranded DNA-binding protein, mitochondrial precursor - Homo| sapiens (Human) Length = 148 Score = 55.1 bits (131), Expect = 4e-07 Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 1/100 (1%) Frame = +2 Query: 281 LDHGIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSS- 457 L+ + + ++G+VGQ+PV +++ V +FSL T N + E +Q + S Sbjct: 26 LERSLNRVHLLGRVGQDPVLRQVEGKNPVTIFSLAT----NEMWRSGDSEVYQLGDVSQK 81 Query: 458 VQWHRVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSD 577 WHR+ ++ L +A ++VK GS +YLEG ++ + D Sbjct: 82 TTWHRISVFRPGLRDVAYQYVKKGSRIYLEGKIDYGEYMD 121
>Q8A7M7:SSB_BACTN Single-stranded DNA-binding protein - Bacteroides thetaiotaomicron| Length = 161 Score = 55.1 bits (131), Expect = 4e-07 Identities = 38/109 (34%), Positives = 55/109 (50%) Frame = +2 Query: 293 IYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWHR 472 + K I++G VGQ+P K +G V F L T R Q ER+ +WH Sbjct: 3 VNKVILIGNVGQDPRVKYFDTGSAVATFPLAT-----TDRGYTLANGTQIPERT--EWHN 55 Query: 473 VCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAV 619 + + +RL + K+V G LYLEG + T+ +SD +G +R I EI V Sbjct: 56 I-VASNRLAEIVDKYVHKGDKLYLEGKIRTRSYSDQ-SGAMRYITEIFV 102
>P09380:SSBS_XENLA Single-stranded DNA-binding protein S, mitochondrial precursor -| Xenopus laevis (African clawed frog) Length = 146 Score = 54.7 bits (130), Expect = 6e-07 Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 1/100 (1%) Frame = +2 Query: 281 LDHGIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAE-RSS 457 L+ I K ++G+VGQ+PV ++ V +FSL T + R ++E H + Sbjct: 24 LERSINKVQLLGRVGQDPVMRQAEGKNPVTIFSLATNELW---RSGESETFHTAGDVNQK 80 Query: 458 VQWHRVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSD 577 WHR+ ++ L +A +HVK G+ L +EG ++ ++D Sbjct: 81 TTWHRISVFRPGLRDVAYQHVKKGARLLVEGKIDYGEYTD 120
>Q889U1:SSB_PSESM Single-stranded DNA-binding protein - Pseudomonas syringae pv.| tomato Length = 189 Score = 54.3 bits (129), Expect = 7e-07 Identities = 37/125 (29%), Positives = 63/125 (50%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 G+ K I+VG GQ+P + L +G V SL T +++ Q E++ +WH Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATS------EQWTDKQSGQKVEKT--EWH 55 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFLG 649 RV ++ ++ +A ++++ GS +Y+EG L+T+ + G+ R EI V G LG Sbjct: 56 RVSMF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLLG 112 Query: 650 NDGNG 664 G Sbjct: 113 GRPQG 117
>P0A2F6:SSB_SALTY Single-stranded DNA-binding protein - Salmonella typhimurium| Length = 176 Score = 53.9 bits (128), Expect = 1e-06 Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 2/131 (1%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 G+ K I+VG +GQ+P + + SG V +L T +++ + +E +WH Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANLTLATSESWRDKQTGEMKE--------QTEWH 56 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFL- 646 RV ++ +L +A ++++ GS +Y+EG L T+ ++D +G R EI V G + + Sbjct: 57 RVVMF-GKLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQERYTTEINVPQIGGVMQML 114 Query: 647 -GNDGNGPKIG 676 G G G G Sbjct: 115 GGRQGGGAPAG 125
>P0A2F7:SSB_SALTI Single-stranded DNA-binding protein - Salmonella typhi| Length = 176 Score = 53.9 bits (128), Expect = 1e-06 Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 2/131 (1%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 G+ K I+VG +GQ+P + + SG V +L T +++ + +E +WH Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANLTLATSESWRDKQTGEMKE--------QTEWH 56 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFL- 646 RV ++ +L +A ++++ GS +Y+EG L T+ ++D +G R EI V G + + Sbjct: 57 RVVMF-GKLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQERYTTEINVPQIGGVMQML 114 Query: 647 -GNDGNGPKIG 676 G G G G Sbjct: 115 GGRQGGGAPAG 125
>P66846:SSB_BORPE Single-stranded DNA-binding protein - Bordetella pertussis| Length = 166 Score = 53.9 bits (128), Expect = 1e-06 Identities = 38/135 (28%), Positives = 63/135 (46%) Frame = +2 Query: 293 IYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWHR 472 + K I+VG +G++P + G + S+ T ++ + E +WHR Sbjct: 4 VNKVILVGNLGRDPEVRYSPDGAAICNVSIATTSQWKDKASGERRE--------ETEWHR 55 Query: 473 VCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFLGN 652 V +Y +RL +A +++K G +Y+EG L+T+ + D TG R EI + LG Sbjct: 56 VVMY-NRLAEIAGEYLKKGRSVYIEGRLKTRKWQDKDTGADRYSTEIVA---DQMQMLGG 111 Query: 653 DGNGPKIGEVKGVGY 697 +G G G GY Sbjct: 112 RDSGGDSGGGYGGGY 126
>P66847:SSB_BORBR Single-stranded DNA-binding protein - Bordetella bronchiseptica| (Alcaligenes bronchisepticus) Length = 166 Score = 53.9 bits (128), Expect = 1e-06 Identities = 38/135 (28%), Positives = 63/135 (46%) Frame = +2 Query: 293 IYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWHR 472 + K I+VG +G++P + G + S+ T ++ + E +WHR Sbjct: 4 VNKVILVGNLGRDPEVRYSPDGAAICNVSIATTSQWKDKASGERRE--------ETEWHR 55 Query: 473 VCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFLGN 652 V +Y +RL +A +++K G +Y+EG L+T+ + D TG R EI + LG Sbjct: 56 VVMY-NRLAEIAGEYLKKGRSVYIEGRLKTRKWQDKDTGADRYSTEIVA---DQMQMLGG 111 Query: 653 DGNGPKIGEVKGVGY 697 +G G G GY Sbjct: 112 RDSGGDSGGGYGGGY 126
>Q8VMM4:SSBW_PSEPU Single-stranded DNA-binding protein - Pseudomonas putida| Length = 180 Score = 53.9 bits (128), Expect = 1e-06 Identities = 37/120 (30%), Positives = 61/120 (50%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 G+ K I+VG GQ+P + L +G V SL T +++ Q ER+ +WH Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATS------EQWTDKQTGQKVERT--EWH 55 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFLG 649 RV ++ ++ +A ++++ GS Y+EG L+T+ + G+ R EI V G LG Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQCYIEGKLQTREWEK--DGIKRYTTEIIVDMQGTMQLLG 112
>P28042:SSB_RAT Single-stranded DNA-binding protein, mitochondrial precursor -| Rattus norvegicus (Rat) Length = 151 Score = 53.1 bits (126), Expect = 2e-06 Identities = 27/99 (27%), Positives = 52/99 (52%) Frame = +2 Query: 281 LDHGIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSV 460 L+ + + ++G+VGQ+PV +++ V +FSL T + R DNE Sbjct: 26 LERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMW---RSGDNEAYQMGDVSQKT 82 Query: 461 QWHRVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSD 577 WHR+ ++ L +A ++VK G+ +++EG ++ + D Sbjct: 83 TWHRISVFRPGLRDVAYQYVKKGARIFVEGKVDYGEYMD 121
>P0C118:SSB_BRUAB Single-stranded DNA-binding protein - Brucella abortus| Length = 168 Score = 53.1 bits (126), Expect = 2e-06 Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 15/149 (10%) Frame = +2 Query: 293 IYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWHR 472 + K I+VG +G +P +RL SG V + T +R+ + ++ +WH Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKD--------RTEWHS 56 Query: 473 VCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVR---------- 622 V I+ + L +A +++K G+ +Y+EG L+T+ + D G R +EI ++ Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQDQ-NGNDRYSKEIVLQKFRGELQMLD 115 Query: 623 -----GNGRFLFLGNDGNGPKIGEVKGVG 694 G GR G GN ++ + G G Sbjct: 116 SRSEGGEGR--SFGGGGNRNQMSDYSGGG 142
>Q2YPX7:SSB_BRUA2 Single-stranded DNA-binding protein - Brucella abortus (strain| 2308) Length = 168 Score = 53.1 bits (126), Expect = 2e-06 Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 15/149 (10%) Frame = +2 Query: 293 IYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWHR 472 + K I+VG +G +P +RL SG V + T +R+ + ++ +WH Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKD--------RTEWHS 56 Query: 473 VCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVR---------- 622 V I+ + L +A +++K G+ +Y+EG L+T+ + D G R +EI ++ Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQDQ-NGNDRYSKEIVLQKFRGELQMLD 115 Query: 623 -----GNGRFLFLGNDGNGPKIGEVKGVG 694 G GR G GN ++ + G G Sbjct: 116 SRSEGGEGR--SFGGGGNRNQMSDYSGGG 142
>Q9PDI7:SSB2_XYLFA Single-stranded DNA-binding protein 2 - Xylella fastidiosa| Length = 164 Score = 53.1 bits (126), Expect = 2e-06 Identities = 38/125 (30%), Positives = 61/125 (48%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 GI K I+VG +G +P K + G T+ SL T +R ++ E +WH Sbjct: 4 GINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKEGNTQER---------TEWH 54 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFLG 649 RV + +LG +A ++++ GS Y+EG++ F+ G R + EI V + L Sbjct: 55 RVKFF-GKLGEIAGEYLRKGSQCYIEGSIRYDKFTGQ-DGQERYVTEI-VADEMQMLGGR 111 Query: 650 NDGNG 664 +DG G Sbjct: 112 SDGGG 116
>Q87DQ5:SSB_XYLFT Single-stranded DNA-binding protein - Xylella fastidiosa (strain| Temecula1 / ATCC 700964) Length = 164 Score = 52.4 bits (124), Expect = 3e-06 Identities = 38/125 (30%), Positives = 61/125 (48%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 GI K I+VG +G +P K + G T+ SL T +R ++ E +WH Sbjct: 4 GINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKDGNTQER---------TEWH 54 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRGNGRFLFLG 649 RV + +LG +A ++++ GS Y+EG++ F+ G R + EI V + L Sbjct: 55 RVKFF-GKLGEIAGEYLRKGSQCYIEGSIRYDKFTGQ-DGQERYVTEI-VADEMQMLGGR 111 Query: 650 NDGNG 664 +DG G Sbjct: 112 SDGGG 116
>Q8P778:SSB_XANCP Single-stranded DNA-binding protein - Xanthomonas campestris pv.| campestris Length = 172 Score = 52.4 bits (124), Expect = 3e-06 Identities = 29/89 (32%), Positives = 48/89 (53%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 GI K I+VG +G +P K ++G + SL T +R +R + E +WH Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDREGNNQER---------TEWH 54 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNL 556 RV + +LG +A ++++ GS +Y+EG L Sbjct: 55 RVVFF-GKLGEIAGEYLRKGSQVYVEGEL 82
>Q8G0J1:SSB_BRUSU Single-stranded DNA-binding protein - Brucella suis| Length = 168 Score = 52.4 bits (124), Expect = 3e-06 Identities = 27/95 (28%), Positives = 51/95 (53%) Frame = +2 Query: 293 IYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWHR 472 + K I+VG +G +P +RL SG V + T +R+ + ++ +WH Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKD--------RTEWHS 56 Query: 473 VCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSD 577 V I+ + L +A +++K G+ +Y+EG L+T+ + D Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQD 91
>Q8YHC2:SSB_BRUME Single-stranded DNA-binding protein - Brucella melitensis| Length = 168 Score = 52.4 bits (124), Expect = 3e-06 Identities = 27/95 (28%), Positives = 51/95 (53%) Frame = +2 Query: 293 IYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWHR 472 + K I+VG +G +P +RL SG V + T +R+ + ++ +WH Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKD--------RTEWHS 56 Query: 473 VCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSD 577 V I+ + L +A +++K G+ +Y+EG L+T+ + D Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQD 91
>P09381:SSBR_XENLA Single-stranded DNA-binding protein R, mitochondrial precursor -| Xenopus laevis (African clawed frog) Length = 148 Score = 52.0 bits (123), Expect = 4e-06 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 1/108 (0%) Frame = +2 Query: 257 TTRPLENGLDHGIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPH 436 +T L L+ + K ++G+VGQ+PV ++ V +FSL T + R +NE Sbjct: 18 STDSLSAILERSMNKVQLLGRVGQDPVMRQADGKNPVTIFSLATNELW---RSGENEVFQ 74 Query: 437 QYAE-RSSVQWHRVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSD 577 + WHRV ++ L +A +HVK G+ L +EG ++ ++D Sbjct: 75 PAGDVNQKTTWHRVSVFRPGLRDVAYQHVKKGARLLVEGKIDYGEYTD 122
>Q8PIJ2:SSB_XANAC Single-stranded DNA-binding protein - Xanthomonas axonopodis pv.| citri Length = 180 Score = 51.6 bits (122), Expect = 5e-06 Identities = 29/89 (32%), Positives = 48/89 (53%) Frame = +2 Query: 290 GIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWH 469 GI K I+VG +G +P K ++G + SL T +R +R + E +WH Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDRDGNNQER---------TEWH 54 Query: 470 RVCIYPDRLGSLALKHVKTGSVLYLEGNL 556 RV + +LG +A ++++ GS +Y+EG L Sbjct: 55 RVVFF-GKLGEIAGEYLRKGSQVYVEGEL 82
>Q9CYR0:SSB_MOUSE Single-stranded DNA-binding protein, mitochondrial precursor - Mus| musculus (Mouse) Length = 152 Score = 51.6 bits (122), Expect = 5e-06 Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 1/100 (1%) Frame = +2 Query: 281 LDHGIYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERS-S 457 L+ + + ++G+VGQ+PV +++ V +FSL T N + E +Q + S Sbjct: 26 LERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLAT----NEMWRSGDSEVYQMGDVSQK 81 Query: 458 VQWHRVCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSD 577 WHR+ ++ L +A ++VK G+ +++EG ++ + D Sbjct: 82 TTWHRISVFRPGLRDVAYQYVKKGARIFVEGKVDYGEYMD 121
>P59928:SSB_BORPA Single-stranded DNA-binding protein - Bordetella parapertussis| Length = 162 Score = 50.8 bits (120), Expect = 8e-06 Identities = 31/107 (28%), Positives = 54/107 (50%) Frame = +2 Query: 293 IYKAIMVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWHR 472 + K I+VG +G++P + G + S+ T ++ + E +WHR Sbjct: 4 VNKVILVGNLGRDPEVRYSPDGAAICNVSIATTSQWKDKASGERRE--------ETEWHR 55 Query: 473 VCIYPDRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREI 613 V +Y +RL +A +++K G +Y+EG L+T+ + D TG R EI Sbjct: 56 VVMY-NRLAEIAGEYLKKGRSVYIEGRLKTRKWQDKDTGADRYSTEI 101
>P0A4K1:SSB1_ANAVA Single-stranded DNA-binding protein 1 - Anabaena variabilis| Length = 119 Score = 33.1 bits (74), Expect = 1.8 Identities = 29/104 (27%), Positives = 50/104 (48%) Frame = +2 Query: 308 MVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWHRVCIYP 487 +VG+VG +P K SG +L NRR N++P W + ++ Sbjct: 8 LVGRVGTDPDIKYFESGSVKCRLTLAV-----NRRS-KNDKP---------DWFTLELW- 51 Query: 488 DRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAV 619 D+ +A +V+ GS++ ++G+L+ +SD TG+ R I V Sbjct: 52 DKTAEVAGNYVRKGSLIGVKGSLKFDSWSDRQTGVNRSTPVIRV 95
>P0A4K0:SSB1_ANASP Single-stranded DNA-binding protein 1 - Anabaena sp. (strain PCC| 7120) Length = 119 Score = 33.1 bits (74), Expect = 1.8 Identities = 29/104 (27%), Positives = 50/104 (48%) Frame = +2 Query: 308 MVGKVGQEPVQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPHQYAERSSVQWHRVCIYP 487 +VG+VG +P K SG +L NRR N++P W + ++ Sbjct: 8 LVGRVGTDPDIKYFESGSVKCRLTLAV-----NRRS-KNDKP---------DWFTLELW- 51 Query: 488 DRLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAV 619 D+ +A +V+ GS++ ++G+L+ +SD TG+ R I V Sbjct: 52 DKTAEVAGNYVRKGSLIGVKGSLKFDSWSDRQTGVNRSTPVIRV 95
>P17534:DEFR2_MOUSE Defensin-related cryptdin, related sequence 2 precursor - Mus| musculus (Mouse) Length = 91 Score = 32.0 bits (71), Expect = 4.0 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = -2 Query: 446 RRTGAAPRCPTGVGCCGCPRCP 381 RR PRCP+ C CPRCP Sbjct: 63 RRCPQCPRCPSCPSCPRCPRCP 84
>Q9Z7Y1:Y572_CHLPN Uncharacteized protein CPn_0572/CP_0177/CPj0572/CpB0594 - Chlamydia| pneumoniae (Chlamydophila pneumoniae) Length = 755 Score = 31.6 bits (70), Expect = 5.2 Identities = 27/92 (29%), Positives = 42/92 (45%) Frame = +3 Query: 210 PPIRVISTGTSRGLPTPPAPSRMASTTASTRL*WLERWGKSLCRSGCGVGRPSCCSRWAP 389 P +V +T T + + + + + T ST S+ GVG P+ +R + Sbjct: 591 PQPQVATTITPQARTASTSTTSIGTGTESTSTTSTGTGTGSVSTQSTGVGTPTTTTR-ST 649 Query: 390 GASATTDARWTTRSRTSTPNAAPCSGTAYAST 485 G SATT T+ + T TP A SGT + +T Sbjct: 650 GTSATTT---TSSASTQTPQAPLPSGTRHVAT 678
>P12221:YCF1A_MARPO Putative membrane protein ycf1 N-terminal part - Marchantia| polymorpha (Liverwort) Length = 1068 Score = 31.2 bits (69), Expect = 6.8 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 1/81 (1%) Frame = -3 Query: 769 SRCSTRAVPQSQFSKGLFWISLSEVPNALHFTYLGAIAIITKK-QKPTISTNSYFSYASN 593 SR S+++ + + S+ F ISLS+ L FTYL ++ K QK +I+ N + S Sbjct: 278 SRFSSQSPIKKKVSQYFFNISLSDGKPRLSFTYLPSLYYFEKNLQKSSINFNLFSSNEIY 337 Query: 592 EPSNRIREHLCLQISFQIENR 530 E + +++ L+I + +NR Sbjct: 338 EKWIKNKKNKKLKIYKEFKNR 358
>Q01102:LYAM3_MOUSE P-selectin precursor - Mus musculus (Mouse)| Length = 768 Score = 30.8 bits (68), Expect = 8.9 Identities = 16/70 (22%), Positives = 35/70 (50%) Frame = -3 Query: 733 FSKGLFWISLSEVPNALHFTYLGAIAIITKKQKPTISTNSYFSYASNEPSNRIREHLCLQ 554 F +WI + ++ N +T++G +T++ + ++A NEP+N+ C++ Sbjct: 85 FFNSYYWIGIRKINNK--WTWVGTNKTLTEEAE---------NWADNEPNNKKNNQDCVE 133 Query: 553 ISFQIENRPG 524 I + + PG Sbjct: 134 IYIKSNSAPG 143
>P16252:CUC2C_HAECO Cuticle collagen 2C - Haemonchus contortus (Barber pole worm)| Length = 210 Score = 30.8 bits (68), Expect = 8.9 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = +1 Query: 379 AGHRGHPQQPTPVGQRGAAP 438 AGH G P QP P G+RG P Sbjct: 174 AGHPGQPGQPGPPGERGVCP 193 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 161,524,387 Number of extensions: 3491654 Number of successful extensions: 10898 Number of sequences better than 10.0: 57 Number of HSP's gapped: 10874 Number of HSP's successfully gapped: 57 Length of query: 328 Length of database: 100,686,439 Length adjustment: 113 Effective length of query: 215 Effective length of database: 69,691,104 Effective search space: 14983587360 Effective search space used: 14983587360 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
