ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf85k10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK072778:Os01g0222500 | 259 | 2e-69 | 2 | AK071200:Os01g0659200 | 220 | 2e-57 | 3 | AK100850:Os05g0480700 | 167 | 2e-41 | 4 | AY339374:Os01g0200600 | 30 | 3.1 | 5 | AK108873:Os01g0200600 | 30 | 3.1 | 6 | Os04g0434900:Os04g0434900 | 29 | 6.8 | 7 | Os12g0614800:Os12g0614800 | 29 | 6.9 | 8 | AK119448:Os12g0615300 | 29 | 6.9 | 9 | AK102292:Os01g0610300 | 29 | 6.9 | 10 | AK099579:Os12g0256300 | 29 | 6.9 | 11 | AK073908:Os12g0256300 | 29 | 6.9 | 12 | AK100846:Os01g0521500 | 28 | 9.0 |
|---|
>AK072778:Os01g0222500 | Length = 231 Score = 259 bits (663), Expect = 2e-69 Identities = 142/230 (61%), Positives = 158/230 (68%) Frame = +2 Query: 143 MDEGNVAQQLKQMTDFIRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRQEYXXXXX 322 M++G+VA+QLKQMTDFIR IR E+ Sbjct: 2 MNDGDVARQLKQMTDFIRQEAVEKAAEIEAAAAEEFQIEKLQLVEAEKKRIRLEFERNEK 61 Query: 323 XXXXXXXXXYSMQLNASRIEVLQAQDDLVKSMMDSARKELLYQSRDHQSYKKLLRILIVQ 502 YS QLNASR+EVLQAQDDL SM+++A KELLY +RDH YK LLRI IVQ Sbjct: 62 QGDIKKKIEYSKQLNASRLEVLQAQDDLAMSMLEAAGKELLYITRDHHVYKNLLRIFIVQ 121 Query: 503 SLLRLKESAVILRCRKEDXXXXXXXXXXARNEYAEKENVYPPEIMVDRHVYLPPAPSHYK 682 SLLRLKE AVILRCRKED A+NEYA+K N+YPPEIMVDR+VYLPPAPSHY+ Sbjct: 122 SLLRLKEPAVILRCRKEDRELVESVLESAKNEYADKANIYPPEIMVDRNVYLPPAPSHYE 181 Query: 683 EHDLSCSGGVVLASRDGKIVFENTLDARLEVVFRKKLPEIRRSLIGQVAA 832 H SCSGGVVLASRDGKIV ENTLDARLEVVFRKKLPEIRRSL+GQVAA Sbjct: 182 AHGPSCSGGVVLASRDGKIVCENTLDARLEVVFRKKLPEIRRSLLGQVAA 231
>AK071200:Os01g0659200 | Length = 230 Score = 220 bits (560), Expect = 2e-57 Identities = 123/230 (53%), Positives = 143/230 (62%) Frame = +2 Query: 143 MDEGNVAQQLKQMTDFIRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRQEYXXXXX 322 M++ +VA+Q++QM FIR IRQEY Sbjct: 1 MNDADVAKQIQQMVRFIRQEAEEKASEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60 Query: 323 XXXXXXXXXYSMQLNASRIEVLQAQDDLVKSMMDSARKELLYQSRDHQSYKKLLRILIVQ 502 YSMQLNASRI+VLQAQDDLV SM + A K+LL S +H YK LL+ L+VQ Sbjct: 61 QVEVRKKIEYSMQLNASRIKVLQAQDDLVNSMKEDATKQLLRVSHNHHEYKNLLKELVVQ 120 Query: 503 SLLRLKESAVILRCRKEDXXXXXXXXXXARNEYAEKENVYPPEIMVDRHVYLPPAPSHYK 682 LLRLKE AV+LRCRKED A+NEYA K V+ PEI+VD VYLPP+PS + Sbjct: 121 GLLRLKEPAVLLRCRKEDHHHVESVLHSAKNEYASKAEVHHPEILVDHDVYLPPSPSSHD 180 Query: 683 EHDLSCSGGVVLASRDGKIVFENTLDARLEVVFRKKLPEIRRSLIGQVAA 832 H+ CSGGVVLASRDGKIV ENTLDARLEVVFRKKLPEIR+ L GQV A Sbjct: 181 SHERFCSGGVVLASRDGKIVCENTLDARLEVVFRKKLPEIRKLLFGQVTA 230
>AK100850:Os05g0480700 | Length = 231 Score = 167 bits (422), Expect = 2e-41 Identities = 95/227 (41%), Positives = 130/227 (57%) Frame = +2 Query: 143 MDEGNVAQQLKQMTDFIRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRQEYXXXXX 322 M++ +V +Q++QM FI IRQ+Y Sbjct: 1 MNDADVGKQIQQMVRFILQEAEEKASEISVAAEEEFNIEKLQLVESEKRRIRQDYERKAK 60 Query: 323 XXXXXXXXXYSMQLNASRIEVLQAQDDLVKSMMDSARKELLYQSRDHQSYKKLLRILIVQ 502 YS QLNA+RI+VL+AQD +V M + A K LL ++D +Y+K+L+ LIVQ Sbjct: 61 QVDVGRKIEYSTQLNAARIKVLRAQDGVVGEMKEDAGKSLLRVTKDATAYRKVLKGLIVQ 120 Query: 503 SLLRLKESAVILRCRKEDXXXXXXXXXXARNEYAEKENVYPPEIMVDRHVYLPPAPSHYK 682 SLLRL+E +V+LRCR+ D A+ EYAEK V P+I++D VYLPP + Sbjct: 121 SLLRLREPSVVLRCREADRGHVESVLEAAKKEYAEKAKVNLPKILIDGKVYLPPPKTARD 180 Query: 683 EHDLSCSGGVVLASRDGKIVFENTLDARLEVVFRKKLPEIRRSLIGQ 823 H CSGGVV+AS+DGKIV +NTLDAR+E+ F++KLPEIR+ L Q Sbjct: 181 AHGPFCSGGVVIASQDGKIVCDNTLDARVEISFKQKLPEIRKKLFSQ 227
>AY339374:Os01g0200600 | Length = 228 Score = 30.0 bits (66), Expect = 3.1 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Frame = +1 Query: 31 HPHRHPSATTQNQRLTVTDPGD--HRRTRDQCASLSKREDGRRECGAAA 171 H H+HPS++T P D H R Q S+ +D +++ AAA Sbjct: 130 HHHKHPSSSTSTSSPPAAPPPDEHHPRHEPQQPESSREDDQQQQPAAAA 178
>AK108873:Os01g0200600 | Length = 228 Score = 30.0 bits (66), Expect = 3.1 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Frame = +1 Query: 31 HPHRHPSATTQNQRLTVTDPGD--HRRTRDQCASLSKREDGRRECGAAA 171 H H+HPS++T P D H R Q S+ +D +++ AAA Sbjct: 130 HHHKHPSSSTSTSSPPAAPPPDEHHPRHEPQQPESSREDDQQQQPAAAA 178
>Os04g0434900:Os04g0434900 | Length = 225 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +3 Query: 30 PPASTSLRDNSKPAPHCHRPRRSSANKGSVCFPLQTRR 143 PP + R P PH P+R+S++ S PL T R Sbjct: 12 PPPRPAGRAQRPPPPHSVAPKRASSSSSSTTPPLLTTR 49
>Os12g0614800:Os12g0614800 | Length = 741 Score = 28.9 bits (63), Expect = 6.9 Identities = 19/36 (52%), Positives = 20/36 (55%) Frame = -2 Query: 171 SCCATFPSSIFAFGEGSTLIPCSPMIAGVGDSEALV 64 SC AT SS F +T P PM VGDSEALV Sbjct: 55 SCAATSISSYFNLTCSNTFNPPRPM---VGDSEALV 87
>AK119448:Os12g0615300 | Length = 731 Score = 28.9 bits (63), Expect = 6.9 Identities = 19/36 (52%), Positives = 20/36 (55%) Frame = -2 Query: 171 SCCATFPSSIFAFGEGSTLIPCSPMIAGVGDSEALV 64 SC AT SS F +T P PM VGDSEALV Sbjct: 24 SCAATSISSYFNLTCNNTFNPPRPM---VGDSEALV 56
>AK102292:Os01g0610300 | Length = 501 Score = 28.9 bits (63), Expect = 6.9 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Frame = +2 Query: 2 IENESPRHDATRIDIPPRQLK----TSASLSPTPAIIGEQGISVLPSPNAKMDEGNVAQQ 169 +E+ESP + +PP K SA P P + E + +P P+ + E +V++ Sbjct: 207 MEDESP---VAAVSLPPSVFKEENVASAIPFPQPVVKEESAAAAIPPPHVALKEESVSKS 263 Query: 170 LKQMT 184 + +T Sbjct: 264 TENIT 268
>AK099579:Os12g0256300 | Length = 759 Score = 28.9 bits (63), Expect = 6.9 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +1 Query: 22 PRRHPHRHPSATTQNQRLTVTDPGDHRRTRDQCASLS 132 PRRH HRH + + +R D HR R + AS S Sbjct: 12 PRRHRHRHDDSPPRRRRRHDDDSPRHRDDRKRRASPS 48
>AK073908:Os12g0256300 | Length = 787 Score = 28.9 bits (63), Expect = 6.9 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +1 Query: 22 PRRHPHRHPSATTQNQRLTVTDPGDHRRTRDQCASLS 132 PRRH HRH + + +R D HR R + AS S Sbjct: 12 PRRHRHRHDDSPPRRRRRHDDDSPRHRDDRKRRASPS 48
>AK100846:Os01g0521500 | Length = 603 Score = 28.5 bits (62), Expect = 9.0 Identities = 20/65 (30%), Positives = 29/65 (44%) Frame = +1 Query: 4 RKRITSPRRHPHRHPSATTQNQRLTVTDPGDHRRTRDQCASLSKREDGRRECGAAA*ADD 183 RK +S RRH H H ++ +++R D RR R + E GRR A+ + Sbjct: 65 RKASSSSRRHRHHHHKSSGRSRRSRDDDDERRRRRRRR-----DEERGRRGGDASESSGS 119 Query: 184 GLHPP 198 G P Sbjct: 120 GSEEP 124 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 29,963,586 Number of extensions: 682598 Number of successful extensions: 1888 Number of sequences better than 10.0: 12 Number of HSP's gapped: 1882 Number of HSP's successfully gapped: 12 Length of query: 371 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 269 Effective length of database: 11,315,673 Effective search space: 3043916037 Effective search space used: 3043916037 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
