ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf85k05 |
|---|---|
| Clone Library Name | barley_pub |
>AK073732:Os12g0514600 | Length = 125 Score = 257 bits (656), Expect = 8e-69 Identities = 123/125 (98%), Positives = 123/125 (98%) Frame = +2 Query: 197 MSRGRSPEPLDFFIWTVEDVGLWLEEINLGGYRQVFEENSVNGEYLESLSMFTTEQILRF 376 MSRGRSPEPLDFFIWTVEDVGLWLEEINLG YRQVFEEN VNGEYLESLSMFTTEQILRF Sbjct: 1 MSRGRSPEPLDFFIWTVEDVGLWLEEINLGSYRQVFEENGVNGEYLESLSMFTTEQILRF 60 Query: 377 IRRCHMKWGDFITLCKELRRIKVACLKGEQEVRRPWWAPSCLSVVFVRAAKRNRQSRVVS 556 IRRCHMKWGDFITLCKELRRIKVACLKGEQEVRRPWWAPSCLSVVFVRAAKRNRQSRVVS Sbjct: 61 IRRCHMKWGDFITLCKELRRIKVACLKGEQEVRRPWWAPSCLSVVFVRAAKRNRQSRVVS 120 Query: 557 LKLEP 571 LKLEP Sbjct: 121 LKLEP 125
>Y18348:Os05g0564200 | Length = 304 Score = 31.6 bits (70), Expect = 0.71 Identities = 20/40 (50%), Positives = 24/40 (60%) Frame = -3 Query: 209 SRGSSPSSRQPTPRKKRCPRSRTGWRWQGRDGSRKGNGDG 90 SR S SR P+PR +R R R +R + RDG R G GDG Sbjct: 189 SRRSHGRSRSPSPRHRRGNRDRDDFR-RERDGYR-GGGDG 226
>AK104767:Os05g0564200 | Length = 304 Score = 31.6 bits (70), Expect = 0.71 Identities = 20/40 (50%), Positives = 24/40 (60%) Frame = -3 Query: 209 SRGSSPSSRQPTPRKKRCPRSRTGWRWQGRDGSRKGNGDG 90 SR S SR P+PR +R R R +R + RDG R G GDG Sbjct: 189 SRRSHGRSRSPSPRHRRGNRDRDDFR-RERDGYR-GGGDG 226
>AK070198:Os05g0564200 | Length = 304 Score = 31.6 bits (70), Expect = 0.71 Identities = 20/40 (50%), Positives = 24/40 (60%) Frame = -3 Query: 209 SRGSSPSSRQPTPRKKRCPRSRTGWRWQGRDGSRKGNGDG 90 SR S SR P+PR +R R R +R + RDG R G GDG Sbjct: 189 SRRSHGRSRSPSPRHRRGNRDRDDFR-RERDGYR-GGGDG 226
>AK110201: | Length = 1029 Score = 31.6 bits (70), Expect = 0.71 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 4/56 (7%) Frame = +2 Query: 38 HRRRLTHPTPPLSRSSQHHRRSPFYSRRVP-AISTPSAISGTVSF---VGLADGRR 193 HR + P ++ ++ H R SRR P A++TP+ +G V ADGR+ Sbjct: 409 HRHSMMVPDTSMAMANNHKRSVSLTSRRAPVALTTPAVAAGVVGVAADAAAADGRK 464
>Os07g0597300:Os07g0597300 | Length = 218 Score = 31.2 bits (69), Expect = 0.93 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = -3 Query: 254 RPRQSI*RNQAAPETSRGSSPSSRQPTPRKKRCPRSRTGWRWQGRDGSRKGNGDG 90 RPR R ++ P RG P + + RC ++R G +G +G +KG DG Sbjct: 67 RPR----RRRSPPPRGRGCRPPNCRSPLEPPRCKKNRIG---KGEEGRKKGEEDG 114
>AF216531:Os03g0151000 | Length = 113 Score = 30.8 bits (68), Expect = 1.2 Identities = 20/53 (37%), Positives = 24/53 (45%) Frame = +2 Query: 59 PTPPLSRSSQHHRRSPFYSRRVPAISTPSAISGTVSFVGLADGRREMSRGRSP 217 P PP RSS RRSP +P +P +S + DGR R RSP Sbjct: 2 PPPPPGRSSTRCRRSP----PLPHQRSPPPVSSSPLPAPATDGRSSARRRRSP 50
>AK063678:Os01g0168300 | Length = 380 Score = 30.8 bits (68), Expect = 1.2 Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 5/36 (13%) Frame = +2 Query: 14 SRRAVASLHRRRLTHP-----TPPLSRSSQHHRRSP 106 SRRA+ +LHRR L HP PP+ R HH SP Sbjct: 8 SRRALHALHRRLLLHPLPSRHAPPIPR---HHFPSP 40
>Os02g0330000:Os02g0330000 | Length = 367 Score = 30.4 bits (67), Expect = 1.6 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 5/51 (9%) Frame = -3 Query: 257 RRPRQSI*RNQAAPETSRGSSPSS---RQPTPRKKRCPRSRTG--WRWQGR 120 RRP R +P + GSS SS R P R R P +R G RWQ R Sbjct: 128 RRPESHCGRRAPSPSLTTGSSSSSTRRRAPALRVPRAPWARRGARQRWQRR 178
>AK066896:Os03g0270200 | Length = 840 Score = 30.0 bits (66), Expect = 2.1 Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 7/78 (8%) Frame = +2 Query: 11 ISRRAVASLHRR-RLTHPTPPLSRS---SQHHRRSPFYSRRVPAIS---TPSAISGTVSF 169 + R S HRR + +PP R S HHRRSP + R P+ + +P S Sbjct: 275 VPRHRSPSPHRRSHIRRKSPPFVRQRSPSPHHRRSPGRAPRSPSPARHRSPRRRSSLDRH 334 Query: 170 VGLADGRREMSRGRSPEP 223 + GRR R RSP P Sbjct: 335 WSPSPGRR---RPRSPSP 349
>AK060809:Os03g0270200 | Length = 580 Score = 30.0 bits (66), Expect = 2.1 Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 7/78 (8%) Frame = +2 Query: 11 ISRRAVASLHRR-RLTHPTPPLSRS---SQHHRRSPFYSRRVPAIS---TPSAISGTVSF 169 + R S HRR + +PP R S HHRRSP + R P+ + +P S Sbjct: 15 VPRHRSPSPHRRSHIRRKSPPFVRQRSPSPHHRRSPGRAPRSPSPARHRSPRRRSSLDRH 74 Query: 170 VGLADGRREMSRGRSPEP 223 + GRR R RSP P Sbjct: 75 WSPSPGRR---RPRSPSP 89
>AK121687:Os12g0574800 | Length = 489 Score = 29.6 bits (65), Expect = 2.7 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = -3 Query: 254 RPRQSI*RNQAAPETSRGSSPSSRQPTPRK-KRCPRSRTGWRWQGRDGSRKGNGDG 90 RPR+ +A G +P P PR +R RS GWR +G GS G G G Sbjct: 79 RPRRRRDLGRALAPDLGGGTP----PRPRGVRRNERSGWGWRRRGGGGSMSGGGGG 130
>AK102465:Os12g0574800 | Length = 489 Score = 29.6 bits (65), Expect = 2.7 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = -3 Query: 254 RPRQSI*RNQAAPETSRGSSPSSRQPTPRK-KRCPRSRTGWRWQGRDGSRKGNGDG 90 RPR+ +A G +P P PR +R RS GWR +G GS G G G Sbjct: 79 RPRRRRDLGRALAPDLGGGTP----PRPRGVRRNERSGWGWRRRGGGGSMSGGGGG 130
>AK073004:Os12g0574800 | Length = 489 Score = 29.6 bits (65), Expect = 2.7 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = -3 Query: 254 RPRQSI*RNQAAPETSRGSSPSSRQPTPRK-KRCPRSRTGWRWQGRDGSRKGNGDG 90 RPR+ +A G +P P PR +R RS GWR +G GS G G G Sbjct: 79 RPRRRRDLGRALAPDLGGGTP----PRPRGVRRNERSGWGWRRRGGGGSMSGGGGG 130
>AK110278: | Length = 661 Score = 28.5 bits (62), Expect = 6.0 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -3 Query: 203 GSSPSSRQPTPRKKRCPRSRTGWRWQGRDGSRKGN 99 GSS SS P P R+G R + R G R+G+ Sbjct: 330 GSSSSSAAPAPAASHRSSRRSGSRSRSRSGGRRGS 364
>AK120996:Os08g0517300 | Length = 459 Score = 28.5 bits (62), Expect = 6.0 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Frame = -3 Query: 311 FLQK-LVCSHQDLSLQATSRRPRQSI*RNQAAPETSRGSSPSSRQPTPRKKRCPRSRTGW 135 F+QK L H DL + TS+ N + + G P +QP PR+K R Sbjct: 254 FVQKHLKLKHADLVRELTSKVRENIYFDNYMSDPKAPGGMPIMQQPAPREKVRQRPPIES 313 Query: 134 RWQGRDGSRK 105 R + G+R+ Sbjct: 314 RLRDERGNRR 323
>AK109880:Os03g0833600 | Length = 147 Score = 28.5 bits (62), Expect = 6.0 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Frame = -3 Query: 206 RGSSPSSRQPTPRKKRCPRSRTGWRWQG------RDGSRKGNGD 93 RG R+ PR++RC R G R +G R R GNG+ Sbjct: 98 RGGDGCRREGRPRRRRCRRRVRGGRRRGVPYQRPRGSERGGNGE 141
>AK070807:Os08g0385900 | Length = 279 Score = 28.5 bits (62), Expect = 6.0 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = -3 Query: 206 RGSSPSSRQPTP-RKKRCPRSRTGWRWQGRDGSRKGNGD 93 RGS SSR P+P R +R RSR+ R + R SR D Sbjct: 184 RGSQRSSRSPSPYRSRRRERSRSRDRQRDRSRSRDRRRD 222
>AK069175:Os08g0517300 | Length = 647 Score = 28.5 bits (62), Expect = 6.0 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Frame = -3 Query: 311 FLQK-LVCSHQDLSLQATSRRPRQSI*RNQAAPETSRGSSPSSRQPTPRKKRCPRSRTGW 135 F+QK L H DL + TS+ N + + G P +QP PR+K R Sbjct: 442 FVQKHLKLKHADLVRELTSKVRENIYFDNYMSDPKAPGGMPIMQQPAPREKVRQRPPIES 501 Query: 134 RWQGRDGSRK 105 R + G+R+ Sbjct: 502 RLRDERGNRR 511
>AK067161:Os08g0567200 | Length = 211 Score = 28.5 bits (62), Expect = 6.0 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = -3 Query: 218 PETSRGSSPSSRQPTPRKKRCPRSRTGWRWQ 126 P +R ++ SS P +KK PR G W+ Sbjct: 61 PANARATATSSSDPAAKKKAIPRRAAGQSWE 91
>AK061692:Os08g0567200 | Length = 235 Score = 28.5 bits (62), Expect = 6.0 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = -3 Query: 218 PETSRGSSPSSRQPTPRKKRCPRSRTGWRWQ 126 P +R ++ SS P +KK PR G W+ Sbjct: 85 PANARATATSSSDPAAKKKAIPRRAAGQSWE 115
>Os08g0135200:Os08g0135200 | Length = 123 Score = 28.5 bits (62), Expect = 6.0 Identities = 20/56 (35%), Positives = 25/56 (44%) Frame = +2 Query: 59 PTPPLSRSSQHHRRSPFYSRRVPAISTPSAISGTVSFVGLADGRREMSRGRSPEPL 226 P PP S+ RR P + RRV A + G V +GRRE R S P+ Sbjct: 41 PLPP----SRCLRRGPLHGRRVAAPPLLAVARGRVGGRNRREGRRECVRRDSRAPI 92
>AK120051:Os01g0169500 | Length = 1842 Score = 28.5 bits (62), Expect = 6.0 Identities = 18/48 (37%), Positives = 25/48 (52%) Frame = +2 Query: 11 ISRRAVASLHRRRLTHPTPPLSRSSQHHRRSPFYSRRVPAISTPSAIS 154 + R AVA+L R LT PPL S+ H S + PA++ +A S Sbjct: 35 LQRHAVAALFRHLLTSVPPPLP-SAAHDALSSLLASPHPAVAAHAAAS 81
>AK100432:Os06g0677300 | Length = 530 Score = 28.5 bits (62), Expect = 6.0 Identities = 23/71 (32%), Positives = 36/71 (50%) Frame = +2 Query: 17 RRAVASLHRRRLTHPTPPLSRSSQHHRRSPFYSRRVPAISTPSAISGTVSFVGLADGRRE 196 +R + L +R + +PPLS S Q H + F P++S PS SG +++ A+ Sbjct: 4 KRTICKLQKRPFSS-SPPLSFSQQEHPLALF-----PSLSRPSN-SGGEAYMDKAE---- 52 Query: 197 MSRGRSPEPLD 229 G+S EP D Sbjct: 53 --EGQSSEPAD 61
>X56063:Os06g0726200 | Length = 199 Score = 28.1 bits (61), Expect = 7.8 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Frame = -3 Query: 266 ATSRR--PRQSI*RNQAAPE-TSRGSSPSSRQPTPRKKRCPRSRTGWRWQGRDGSRK 105 AT+RR PR S ++P T +SP P P R PRS R + R G R+ Sbjct: 79 ATTRRARPRTSTPTTPSSPPPTPSRASPQPATPPPASARSPRSWRRRRTRPRAGGRR 135
>AY378172:Os06g0726200 | Length = 195 Score = 28.1 bits (61), Expect = 7.8 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Frame = -3 Query: 266 ATSRR--PRQSI*RNQAAPE-TSRGSSPSSRQPTPRKKRCPRSRTGWRWQGRDGSRK 105 AT+RR PR S ++P T +SP P P R PRS R + R G R+ Sbjct: 75 ATTRRARPRTSTPTTPSSPPPTPSRASPQPATPPPASARSPRSWRRRRTRPRAGGRR 131
>AK120993: | Length = 340 Score = 28.1 bits (61), Expect = 7.8 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -3 Query: 209 SRGSSPSSRQPTPRKKRCPRSRTGWR 132 SR S+P R P PR+ R PRS R Sbjct: 187 SRPSAPGPRGPRPRRHRLPRSTASVR 212
>Z29961:Os06g0726200 | Length = 214 Score = 28.1 bits (61), Expect = 7.8 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Frame = -3 Query: 266 ATSRR--PRQSI*RNQAAPE-TSRGSSPSSRQPTPRKKRCPRSRTGWRWQGRDGSRK 105 AT+RR PR S ++P T +SP P P R PRS R + R G R+ Sbjct: 94 ATTRRARPRTSTPTTPSSPPPTPSRASPQPATPPPASARSPRSWRRRRTRPRAGGRR 150
>AK105798:Os06g0726200 | Length = 214 Score = 28.1 bits (61), Expect = 7.8 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Frame = -3 Query: 266 ATSRR--PRQSI*RNQAAPE-TSRGSSPSSRQPTPRKKRCPRSRTGWRWQGRDGSRK 105 AT+RR PR S ++P T +SP P P R PRS R + R G R+ Sbjct: 94 ATTRRARPRTSTPTTPSSPPPTPSRASPQPATPPPASARSPRSWRRRRTRPRAGGRR 150
>AK104020:Os06g0726200 | Length = 214 Score = 28.1 bits (61), Expect = 7.8 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Frame = -3 Query: 266 ATSRR--PRQSI*RNQAAPE-TSRGSSPSSRQPTPRKKRCPRSRTGWRWQGRDGSRK 105 AT+RR PR S ++P T +SP P P R PRS R + R G R+ Sbjct: 94 ATTRRARPRTSTPTTPSSPPPTPSRASPQPATPPPASARSPRSWRRRRTRPRAGGRR 150
>AK099339:Os06g0726200 | Length = 214 Score = 28.1 bits (61), Expect = 7.8 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Frame = -3 Query: 266 ATSRR--PRQSI*RNQAAPE-TSRGSSPSSRQPTPRKKRCPRSRTGWRWQGRDGSRK 105 AT+RR PR S ++P T +SP P P R PRS R + R G R+ Sbjct: 94 ATTRRARPRTSTPTTPSSPPPTPSRASPQPATPPPASARSPRSWRRRRTRPRAGGRR 150
>AK061042:Os06g0726200 | Length = 214 Score = 28.1 bits (61), Expect = 7.8 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Frame = -3 Query: 266 ATSRR--PRQSI*RNQAAPE-TSRGSSPSSRQPTPRKKRCPRSRTGWRWQGRDGSRK 105 AT+RR PR S ++P T +SP P P R PRS R + R G R+ Sbjct: 94 ATTRRARPRTSTPTTPSSPPPTPSRASPQPATPPPASARSPRSWRRRRTRPRAGGRR 150
>AK120631:Os03g0364700 | Length = 274 Score = 28.1 bits (61), Expect = 7.9 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = +2 Query: 38 HRRRLTHPTPPLSRSSQHHRRSPFY-SRRVPAISTPSAISGTVSFVGLADGRR 193 H RR P R+ + HRR+P + +RR PA++ A + + L D R Sbjct: 118 HPRRRRRPPGRPPRAPRRHRRAPLHRARRPPAVAAAEAATRADRRLLLPDAAR 170
>AK109333:Os05g0358400 | Length = 308 Score = 28.1 bits (61), Expect = 7.9 Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 3/37 (8%) Frame = +2 Query: 47 RLTH-PTPPLSRSSQHHRRSPFYS-RRVPAI-STPSA 148 RL+H PT PLS H RRSP + RR+P + S+PSA Sbjct: 28 RLSHLPTRPLSAPRLHLRRSPEPTHRRLPLMASSPSA 64
>AK073400:Os09g0542900 | Length = 254 Score = 28.1 bits (61), Expect = 7.9 Identities = 20/55 (36%), Positives = 26/55 (47%) Frame = +2 Query: 59 PTPPLSRSSQHHRRSPFYSRRVPAISTPSAISGTVSFVGLADGRREMSRGRSPEP 223 P PP RSS +HR + +S + +I P A G G R S R+PEP Sbjct: 41 PPPPHGRSSFNHRNA--FSGPIVSIVPPEARGG-----GGGSRREHRSGYRTPEP 88
>AK072965:Os01g0704400 | Length = 301 Score = 28.1 bits (61), Expect = 7.9 Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 18/87 (20%) Frame = +2 Query: 14 SRRAVASLHRRRLTHPTPPLSRSSQ--HHR-----------RSPFYSRRVPAISTPSAIS 154 SRR +A RR T PTPP+S S+ HR R P + P+ PS I Sbjct: 16 SRRFLAPGRRRHRTVPTPPVSPPSRLLLHRVADGSMSSSSSRGPGWLSTAPSQIQPSLIP 75 Query: 155 GTVSFVGLADGR-----REMSRGRSPE 220 + + R REM+ G S E Sbjct: 76 DSPILTAPSQRRGGVVAREMTGGESEE 102
>AK071714:Os05g0358400 | Length = 308 Score = 28.1 bits (61), Expect = 7.9 Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 3/37 (8%) Frame = +2 Query: 47 RLTH-PTPPLSRSSQHHRRSPFYS-RRVPAI-STPSA 148 RL+H PT PLS H RRSP + RR+P + S+PSA Sbjct: 28 RLSHLPTRPLSAPRLHLRRSPEPTHRRLPLMASSPSA 64 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 25,770,622 Number of extensions: 651683 Number of successful extensions: 2782 Number of sequences better than 10.0: 37 Number of HSP's gapped: 2759 Number of HSP's successfully gapped: 37 Length of query: 278 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 179 Effective length of database: 11,435,796 Effective search space: 2047007484 Effective search space used: 2047007484 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
