| Clone Name | FLbaf85k05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001073415.1| Oryza sativa (japonica cultivar-group) Os12g0514600 (Os12g0514600) mRNA, complete cds Length = 924 Score = 462 bits (233), Expect = e-126 Identities = 341/377 (90%) Strand = Plus / Plus Query: 191 agggagatgagccgcgggaggtctccggagccgcttgatttcttcatatggactgtcgag 250 |||||||||||||| ||| |||| ||||||||||| ||||||||||| ||||| |||||| Sbjct: 234 agggagatgagccgggggcggtcgccggagccgctggatttcttcatctggacagtcgag 293 Query: 251 gacgtcggcttgtggcttgaagagataaatcttggtggctacagacaagtttttgaagaa 310 || || || || ||||||||||||||||| ||||| ||||||| ||||||||||| ||| Sbjct: 294 gatgttggattatggcttgaagagataaaccttggcagctacaggcaagtttttgaggaa 353 Query: 311 aacagtgtcaatggagagtatctagagagcttgtcgatgtttactaccgagcagattctg 370 ||| ||||||||||||||||||| || ||| |||||||||||||||| || ||||||||| Sbjct: 354 aacggtgtcaatggagagtatcttgaaagcctgtcgatgtttactacagaacagattctg 413 Query: 371 cggtttatcaggcggtgccatatgaaatggggagattttatcacattatgcaaagagttg 430 |||||||||||| ||||||||||||||||||||||||| || ||||| |||||||||||| Sbjct: 414 cggtttatcaggaggtgccatatgaaatggggagatttcattacattgtgcaaagagttg 473 Query: 431 aggcgcattaaagtggcctgcctgaaaggggagcaagaagtccggaggccatggtgggca 490 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 474 aggcgcatcaaagtggcctgcctgaaaggggagcaagaagtccgcaggccatggtgggcg 533 Query: 491 ccatcgtgcctatcggtggtgtttgtgagggcagcaaagcggaaccgacagtcccgagtt 550 || || ||||||||||||||||| |||||||| || ||||||||||| ||||||||||| Sbjct: 534 ccgtcatgcctatcggtggtgttcgtgagggcggccaagcggaaccggcagtcccgagtc 593 Query: 551 gtctccctaaagctgga 567 |||||||| |||||||| Sbjct: 594 gtctccctgaagctgga 610
>dbj|AK073732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060I15, full insert sequence Length = 925 Score = 462 bits (233), Expect = e-126 Identities = 341/377 (90%) Strand = Plus / Plus Query: 191 agggagatgagccgcgggaggtctccggagccgcttgatttcttcatatggactgtcgag 250 |||||||||||||| ||| |||| ||||||||||| ||||||||||| ||||| |||||| Sbjct: 235 agggagatgagccgggggcggtcgccggagccgctggatttcttcatctggacagtcgag 294 Query: 251 gacgtcggcttgtggcttgaagagataaatcttggtggctacagacaagtttttgaagaa 310 || || || || ||||||||||||||||| ||||| ||||||| ||||||||||| ||| Sbjct: 295 gatgttgggttatggcttgaagagataaaccttggcagctacaggcaagtttttgaggaa 354 Query: 311 aacagtgtcaatggagagtatctagagagcttgtcgatgtttactaccgagcagattctg 370 ||| ||||||||||||||||||| || ||| |||||||||||||||| || ||||||||| Sbjct: 355 aacggtgtcaatggagagtatcttgaaagcctgtcgatgtttactacagaacagattctg 414 Query: 371 cggtttatcaggcggtgccatatgaaatggggagattttatcacattatgcaaagagttg 430 |||||||||||| ||||||||||||||||||||||||| || ||||| |||||||||||| Sbjct: 415 cggtttatcaggaggtgccatatgaaatggggagatttcattacattgtgcaaagagttg 474 Query: 431 aggcgcattaaagtggcctgcctgaaaggggagcaagaagtccggaggccatggtgggca 490 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 475 aggcgcatcaaagtggcctgcctgaaaggggagcaagaagtccgcaggccatggtgggcg 534 Query: 491 ccatcgtgcctatcggtggtgtttgtgagggcagcaaagcggaaccgacagtcccgagtt 550 || || ||||||||||||||||| |||||||| || ||||||||||| ||||||||||| Sbjct: 535 ccgtcatgcctatcggtggtgttcgtgagggcggccaagcggaaccggcagtcccgagtc 594 Query: 551 gtctccctaaagctgga 567 |||||||| |||||||| Sbjct: 595 gtctccctgaagctgga 611
>gb|AY105110.1| Zea mays PCO079612 mRNA sequence Length = 1023 Score = 375 bits (189), Expect = e-100 Identities = 342/393 (87%) Strand = Plus / Plus Query: 188 aggagggagatgagccgcgggaggtctccggagccgcttgatttcttcatatggactgtc 247 |||| ||||||| |||| ||| |||| ||||| ||||| ||||||||||||||||||||| Sbjct: 318 aggaaggagatgggccgtgggcggtcgccggaaccgctcgatttcttcatatggactgtc 377 Query: 248 gaggacgtcggcttgtggcttgaagagataaatcttggtggctacagacaagtttttgaa 307 ||||| || || || ||||| ||||| || || |||||||||||||||||||| |||||| Sbjct: 378 gaggatgttggattatggctggaagaaattaaccttggtggctacagacaagtatttgaa 437 Query: 308 gaaaacagtgtcaatggagagtatctagagagcttgtcgatgtttactaccgagcagatt 367 ||||| ||||||| ||||| |||||||| |||||||| ||||||||||| ||||||||| Sbjct: 438 gaaaatggtgtcaacggagaatatctagaaagcttgtccatgtttactactgagcagatt 497 Query: 368 ctgcggtttatcaggcggtgccatatgaaatggggagattttatcacattatgcaaagag 427 ||||| ||||| |||||||||||||||||||||||||| ||||||||| | ||||||||| Sbjct: 498 ctgcgttttattaggcggtgccatatgaaatggggagactttatcacactgtgcaaagag 557 Query: 428 ttgaggcgcattaaagtggcctgcctgaaaggggagcaagaagtccggaggccatggtgg 487 ||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 558 ttgaggcgcattaaagtcgcctgcctcaaaggggagcaagaagtccgcaggccatggtgg 617 Query: 488 gcaccatcgtgcctatcggtggtgtttgtgagggcagcaaagcggaaccgacagtcccga 547 || || | ||||| || | ||||| ||||||||||| |||| |||| | ||||||| Sbjct: 618 gcgccggcatgcctctccatagtgttcgtgagggcagccaagcagaacaggaagtcccgt 677 Query: 548 gttgtctccctaaagctggaaccttgatgcttg 580 || |||||| | ||||||||||| | ||||||| Sbjct: 678 gtcgtctccttgaagctggaaccataatgcttg 710
>gb|DQ244411.1| Zea mays clone 7242 mRNA sequence Length = 787 Score = 373 bits (188), Expect = e-100 Identities = 344/396 (86%) Strand = Plus / Plus Query: 185 gggaggagggagatgagccgcgggaggtctccggagccgcttgatttcttcatatggact 244 ||||||||||||||| |||| | | | || ||||| ||||| |||| ||||||||||||| Sbjct: 101 gggaggagggagatgggccgggcgcgatcgccggaaccgctcgattacttcatatggact 160 Query: 245 gtcgaggacgtcggcttgtggcttgaagagataaatcttggtggctacagacaagttttt 304 |||||||| || || || ||||| ||||| |||||||||||||||||||||||||| ||| Sbjct: 161 gtcgaggatgttggattatggctggaagaaataaatcttggtggctacagacaagtattt 220 Query: 305 gaagaaaacagtgtcaatggagagtatctagagagcttgtcgatgtttactaccgagcag 364 ||||||| |||||||||||||| |||||||| |||||||| ||||||||||| |||||| Sbjct: 221 caagaaaatagtgtcaatggagaatatctagaaagcttgtccatgtttactactgagcag 280 Query: 365 attctgcggtttatcaggcggtgccatatgaaatggggagattttatcacattatgcaaa 424 |||||||| ||||| |||||||||||||||||||||||||| ||||||||| | |||||| Sbjct: 281 attctgcgctttattaggcggtgccatatgaaatggggagactttatcacactgtgcaaa 340 Query: 425 gagttgaggcgcattaaagtggcctgcctgaaaggggagcaagaagtccggaggccatgg 484 ||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||| Sbjct: 341 gagttgaggcgcattaaagtggcgtgccttaaaggggagcaagaagtccgcaggccatgg 400 Query: 485 tgggcaccatcgtgcctatcggtggtgtttgtgagggcagcaaagcggaaccgacagtcc 544 ||||| || | ||||| || || || || |||||||||| |||| |||| | ||||| Sbjct: 401 tgggcgccggcatgcctctccgtagttttcgtgagggcagacaagcagaacaggaagtcc 460 Query: 545 cgagttgtctccctaaagctggaaccttgatgcttg 580 || || ||||| | ||||||||||| | ||||||| Sbjct: 461 cgtgtagtctcgttgaagctggaaccataatgcttg 496
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 232 bits (117), Expect = 2e-57 Identities = 165/181 (91%) Strand = Plus / Minus Query: 263 tggcttgaagagataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaat 322 ||||||||||||||||| ||||| ||||||| ||||||||||| |||||| |||||||| Sbjct: 19970946 tggcttgaagagataaaccttggcagctacaggcaagtttttgaggaaaacggtgtcaat 19970887 Query: 323 ggagagtatctagagagcttgtcgatgtttactaccgagcagattctgcggtttatcagg 382 ||||||||||| || ||| |||||||||||||||| || ||||||||||||||||||||| Sbjct: 19970886 ggagagtatcttgaaagcctgtcgatgtttactacagaacagattctgcggtttatcagg 19970827 Query: 383 cggtgccatatgaaatggggagattttatcacattatgcaaagagttgaggcgcattaaa 442 ||||||||||||||||||||||||| || ||||| |||||||||||||||||||| ||| Sbjct: 19970826 aggtgccatatgaaatggggagatttcattacattgtgcaaagagttgaggcgcatcaaa 19970767 Query: 443 g 443 | Sbjct: 19970766 g 19970766 Score = 170 bits (86), Expect = 5e-39 Identities = 116/126 (92%) Strand = Plus / Minus Query: 442 agtggcctgcctgaaaggggagcaagaagtccggaggccatggtgggcaccatcgtgcct 501 ||||||||||||||||||||||||||||||||| |||||||||||||| || || ||||| Sbjct: 19969732 agtggcctgcctgaaaggggagcaagaagtccgcaggccatggtgggcgccgtcatgcct 19969673 Query: 502 atcggtggtgtttgtgagggcagcaaagcggaaccgacagtcccgagttgtctccctaaa 561 |||||||||||| |||||||| || ||||||||||| ||||||||||| |||||||| || Sbjct: 19969672 atcggtggtgttcgtgagggcggccaagcggaaccggcagtcccgagtcgtctccctgaa 19969613 Query: 562 gctgga 567 |||||| Sbjct: 19969612 gctgga 19969607 Score = 73.8 bits (37), Expect = 9e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 191 agggagatgagccgcgggaggtctccggagccgcttgatttcttcatatggactgtcgag 250 |||||||||||||| ||| |||| ||||||||||| ||||||||||| ||||| |||||| Sbjct: 19973280 agggagatgagccgggggcggtcgccggagccgctggatttcttcatctggacagtcgag 19973221 Query: 251 g 251 | Sbjct: 19973220 g 19973220
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 232 bits (117), Expect = 2e-57 Identities = 165/181 (91%) Strand = Plus / Plus Query: 263 tggcttgaagagataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaat 322 ||||||||||||||||| ||||| ||||||| ||||||||||| |||||| |||||||| Sbjct: 56314 tggcttgaagagataaaccttggcagctacaggcaagtttttgaggaaaacggtgtcaat 56373 Query: 323 ggagagtatctagagagcttgtcgatgtttactaccgagcagattctgcggtttatcagg 382 ||||||||||| || ||| |||||||||||||||| || ||||||||||||||||||||| Sbjct: 56374 ggagagtatcttgaaagcctgtcgatgtttactacagaacagattctgcggtttatcagg 56433 Query: 383 cggtgccatatgaaatggggagattttatcacattatgcaaagagttgaggcgcattaaa 442 ||||||||||||||||||||||||| || ||||| |||||||||||||||||||| ||| Sbjct: 56434 aggtgccatatgaaatggggagatttcattacattgtgcaaagagttgaggcgcatcaaa 56493 Query: 443 g 443 | Sbjct: 56494 g 56494 Score = 170 bits (86), Expect = 5e-39 Identities = 116/126 (92%) Strand = Plus / Plus Query: 442 agtggcctgcctgaaaggggagcaagaagtccggaggccatggtgggcaccatcgtgcct 501 ||||||||||||||||||||||||||||||||| |||||||||||||| || || ||||| Sbjct: 57528 agtggcctgcctgaaaggggagcaagaagtccgcaggccatggtgggcgccgtcatgcct 57587 Query: 502 atcggtggtgtttgtgagggcagcaaagcggaaccgacagtcccgagttgtctccctaaa 561 |||||||||||| |||||||| || ||||||||||| ||||||||||| |||||||| || Sbjct: 57588 atcggtggtgttcgtgagggcggccaagcggaaccggcagtcccgagtcgtctccctgaa 57647 Query: 562 gctgga 567 |||||| Sbjct: 57648 gctgga 57653 Score = 73.8 bits (37), Expect = 9e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 191 agggagatgagccgcgggaggtctccggagccgcttgatttcttcatatggactgtcgag 250 |||||||||||||| ||| |||| ||||||||||| ||||||||||| ||||| |||||| Sbjct: 53980 agggagatgagccgggggcggtcgccggagccgctggatttcttcatctggacagtcgag 54039 Query: 251 g 251 | Sbjct: 54040 g 54040
>ref|NM_111655.3| Arabidopsis thaliana unknown protein (AT3G07760) mRNA, complete cds Length = 780 Score = 99.6 bits (50), Expect = 2e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 213 ctccggagccgcttgatttcttcatatggactgtcgaggacgtcggcttgtggcttgaag 272 |||| ||||| |||||||||||||| |||||||| ||||| || || | ||||| || | Sbjct: 153 ctcccgagcctcttgatttcttcatctggactgttgaggatgttgggtcttggctcgagg 212 Query: 273 agataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaatggagagtatc 332 ||||||| ||||| |||||| | || |||| ||||||| ||||||||||||| |||| Sbjct: 213 agataaaccttgggggctaccgccagattttcaaagaaaatggtgtcaatggagaatatc 272 Query: 333 tagagagcttgtcgatgtttactaccgagcagat 366 |||| ||| |||| ||||||||||||||||||| Sbjct: 273 tagaaagcatgtctgtgtttactaccgagcagat 306 Score = 52.0 bits (26), Expect = 0.003 Identities = 80/98 (81%) Strand = Plus / Plus Query: 477 ggccatggtgggcaccatcgtgcctatcggtggtgtttgtgagggcagcaaagcggaacc 536 |||||||||||||||| || || ||||| || || ||||| | |||||| || || |||| Sbjct: 417 ggccatggtgggcaccgtcttgtctatccgtagtctttgttaaggcagccaaacgcaacc 476 Query: 537 gacagtcccgagttgtctccctaaagctggaaccttga 574 ||||||| || ||||| || || ||||| ||| ||||| Sbjct: 477 gacagtctcgtgttgtatctctcaagcttgaatcttga 514
>ref|NM_180207.1| Arabidopsis thaliana unknown protein (AT3G07760) mRNA, complete cds Length = 766 Score = 99.6 bits (50), Expect = 2e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 213 ctccggagccgcttgatttcttcatatggactgtcgaggacgtcggcttgtggcttgaag 272 |||| ||||| |||||||||||||| |||||||| ||||| || || | ||||| || | Sbjct: 154 ctcccgagcctcttgatttcttcatctggactgttgaggatgttgggtcttggctcgagg 213 Query: 273 agataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaatggagagtatc 332 ||||||| ||||| |||||| | || |||| ||||||| ||||||||||||| |||| Sbjct: 214 agataaaccttgggggctaccgccagattttcaaagaaaatggtgtcaatggagaatatc 273 Query: 333 tagagagcttgtcgatgtttactaccgagcagat 366 |||| ||| |||| ||||||||||||||||||| Sbjct: 274 tagaaagcatgtctgtgtttactaccgagcagat 307 Score = 52.0 bits (26), Expect = 0.003 Identities = 80/98 (81%) Strand = Plus / Plus Query: 477 ggccatggtgggcaccatcgtgcctatcggtggtgtttgtgagggcagcaaagcggaacc 536 |||||||||||||||| || || ||||| || || ||||| | |||||| || || |||| Sbjct: 418 ggccatggtgggcaccgtcttgtctatccgtagtctttgttaaggcagccaaacgcaacc 477 Query: 537 gacagtcccgagttgtctccctaaagctggaaccttga 574 ||||||| || ||||| || || ||||| ||| ||||| Sbjct: 478 gacagtctcgtgttgtatctctcaagcttgaatcttga 515
>gb|BT014708.1| Arabidopsis thaliana At3g07760.2 mRNA sequence Length = 375 Score = 99.6 bits (50), Expect = 2e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 213 ctccggagccgcttgatttcttcatatggactgtcgaggacgtcggcttgtggcttgaag 272 |||| ||||| |||||||||||||| |||||||| ||||| || || | ||||| || | Sbjct: 14 ctcccgagcctcttgatttcttcatctggactgttgaggatgttgggtcttggctcgagg 73 Query: 273 agataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaatggagagtatc 332 ||||||| ||||| |||||| | || |||| ||||||| ||||||||||||| |||| Sbjct: 74 agataaaccttgggggctaccgccagattttcaaagaaaatggtgtcaatggagaatatc 133 Query: 333 tagagagcttgtcgatgtttactaccgagcagat 366 |||| ||| |||| ||||||||||||||||||| Sbjct: 134 tagaaagcatgtctgtgtttactaccgagcagat 167 Score = 52.0 bits (26), Expect = 0.003 Identities = 80/98 (81%) Strand = Plus / Plus Query: 477 ggccatggtgggcaccatcgtgcctatcggtggtgtttgtgagggcagcaaagcggaacc 536 |||||||||||||||| || || ||||| || || ||||| | |||||| || || |||| Sbjct: 278 ggccatggtgggcaccgtcttgtctatccgtagtctttgttaaggcagccaaacgcaacc 337 Query: 537 gacagtcccgagttgtctccctaaagctggaaccttga 574 ||||||| || ||||| || || ||||| ||| ||||| Sbjct: 338 gacagtctcgtgttgtatctctcaagcttgaatcttga 375
>gb|AY064693.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 400 Score = 99.6 bits (50), Expect = 2e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 213 ctccggagccgcttgatttcttcatatggactgtcgaggacgtcggcttgtggcttgaag 272 |||| ||||| |||||||||||||| |||||||| ||||| || || | ||||| || | Sbjct: 17 ctcccgagcctcttgatttcttcatctggactgttgaggatgttgggtcttggctcgagg 76 Query: 273 agataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaatggagagtatc 332 ||||||| ||||| |||||| | || |||| ||||||| ||||||||||||| |||| Sbjct: 77 agataaaccttgggggctaccgccagattttcaaagaaaatggtgtcaatggagaatatc 136 Query: 333 tagagagcttgtcgatgtttactaccgagcagat 366 |||| ||| |||| ||||||||||||||||||| Sbjct: 137 tagaaagcatgtctgtgtttactaccgagcagat 170 Score = 52.0 bits (26), Expect = 0.003 Identities = 80/98 (81%) Strand = Plus / Plus Query: 477 ggccatggtgggcaccatcgtgcctatcggtggtgtttgtgagggcagcaaagcggaacc 536 |||||||||||||||| || || ||||| || || ||||| | |||||| || || |||| Sbjct: 281 ggccatggtgggcaccgtcttgtctatccgtagtctttgttaaggcagccaaacgcaacc 340 Query: 537 gacagtcccgagttgtctccctaaagctggaaccttga 574 ||||||| || ||||| || || ||||| ||| ||||| Sbjct: 341 gacagtctcgtgttgtatctctcaagcttgaatcttga 378
>gb|AF428412.1|AF428412 Arabidopsis thaliana At3g07760/F17A17.10 mRNA, complete cds Length = 814 Score = 99.6 bits (50), Expect = 2e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 213 ctccggagccgcttgatttcttcatatggactgtcgaggacgtcggcttgtggcttgaag 272 |||| ||||| |||||||||||||| |||||||| ||||| || || | ||||| || | Sbjct: 197 ctcccgagcctcttgatttcttcatctggactgttgaggatgttgggtcttggctcgagg 256 Query: 273 agataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaatggagagtatc 332 ||||||| ||||| |||||| | || |||| ||||||| ||||||||||||| |||| Sbjct: 257 agataaaccttgggggctaccgccagattttcaaagaaaatggtgtcaatggagaatatc 316 Query: 333 tagagagcttgtcgatgtttactaccgagcagat 366 |||| ||| |||| ||||||||||||||||||| Sbjct: 317 tagaaagcatgtctgtgtttactaccgagcagat 350 Score = 52.0 bits (26), Expect = 0.003 Identities = 80/98 (81%) Strand = Plus / Plus Query: 477 ggccatggtgggcaccatcgtgcctatcggtggtgtttgtgagggcagcaaagcggaacc 536 |||||||||||||||| || || ||||| || || ||||| | |||||| || || |||| Sbjct: 461 ggccatggtgggcaccgtcttgtctatccgtagtctttgttaaggcagccaaacgcaacc 520 Query: 537 gacagtcccgagttgtctccctaaagctggaaccttga 574 ||||||| || ||||| || || ||||| ||| ||||| Sbjct: 521 gacagtctcgtgttgtatctctcaagcttgaatcttga 558
>gb|AY054591.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 753 Score = 99.6 bits (50), Expect = 2e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 213 ctccggagccgcttgatttcttcatatggactgtcgaggacgtcggcttgtggcttgaag 272 |||| ||||| |||||||||||||| |||||||| ||||| || || | ||||| || | Sbjct: 154 ctcccgagcctcttgatttcttcatctggactgttgaggatgttgggtcttggctcgagg 213 Query: 273 agataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaatggagagtatc 332 ||||||| ||||| |||||| | || |||| ||||||| ||||||||||||| |||| Sbjct: 214 agataaaccttgggggctaccgccagattttcaaagaaaatggtgtcaatggagaatatc 273 Query: 333 tagagagcttgtcgatgtttactaccgagcagat 366 |||| ||| |||| ||||||||||||||||||| Sbjct: 274 tagaaagcatgtctgtgtttactaccgagcagat 307 Score = 52.0 bits (26), Expect = 0.003 Identities = 80/98 (81%) Strand = Plus / Plus Query: 477 ggccatggtgggcaccatcgtgcctatcggtggtgtttgtgagggcagcaaagcggaacc 536 |||||||||||||||| || || ||||| || || ||||| | |||||| || || |||| Sbjct: 418 ggccatggtgggcaccgtcttgtctatccgtagtctttgttaaggcagccaaacgcaacc 477 Query: 537 gacagtcccgagttgtctccctaaagctggaaccttga 574 ||||||| || ||||| || || ||||| ||| ||||| Sbjct: 478 gacagtctcgtgttgtatctctcaagcttgaatcttga 515
>gb|AY088501.1| Arabidopsis thaliana clone 7246 mRNA, complete sequence Length = 779 Score = 99.6 bits (50), Expect = 2e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 213 ctccggagccgcttgatttcttcatatggactgtcgaggacgtcggcttgtggcttgaag 272 |||| ||||| |||||||||||||| |||||||| ||||| || || | ||||| || | Sbjct: 153 ctcccgagcctcttgatttcttcatctggactgttgaggatgttgggtcttggctcgagg 212 Query: 273 agataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaatggagagtatc 332 ||||||| ||||| |||||| | || |||| ||||||| ||||||||||||| |||| Sbjct: 213 agataaaccttgggggctaccgccagattttcaaagaaaatggtgtcaatggagaatatc 272 Query: 333 tagagagcttgtcgatgtttactaccgagcagat 366 |||| ||| |||| ||||||||||||||||||| Sbjct: 273 tagaaagcatgtctgtgtttactaccgagcagat 306 Score = 52.0 bits (26), Expect = 0.003 Identities = 80/98 (81%) Strand = Plus / Plus Query: 477 ggccatggtgggcaccatcgtgcctatcggtggtgtttgtgagggcagcaaagcggaacc 536 |||||||||||||||| || || ||||| || || ||||| | |||||| || || |||| Sbjct: 417 ggccatggtgggcaccgtcttgtctatccgtagtctttgttaaggcagccaaacgcaacc 476 Query: 537 gacagtcccgagttgtctccctaaagctggaaccttga 574 ||||||| || ||||| || || ||||| ||| ||||| Sbjct: 477 gacagtctcgtgttgtatctctcaagcttgaatcttga 514
>emb|BX824593.1|CNS0A5KM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH59ZB08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 690 Score = 99.6 bits (50), Expect = 2e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 213 ctccggagccgcttgatttcttcatatggactgtcgaggacgtcggcttgtggcttgaag 272 |||| ||||| |||||||||||||| |||||||| ||||| || || | ||||| || | Sbjct: 81 ctcccgagcctcttgatttcttcatctggactgttgaggatgttgggtcttggctcgagg 140 Query: 273 agataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaatggagagtatc 332 ||||||| ||||| |||||| | || |||| ||||||| ||||||||||||| |||| Sbjct: 141 agataaaccttgggggctaccgccagattttcaaagaaaatggtgtcaatggagaatatc 200 Query: 333 tagagagcttgtcgatgtttactaccgagcagat 366 |||| ||| |||| ||||||||||||||||||| Sbjct: 201 tagaaagcatgtctgtgtttactaccgagcagat 234 Score = 52.0 bits (26), Expect = 0.003 Identities = 80/98 (81%) Strand = Plus / Plus Query: 477 ggccatggtgggcaccatcgtgcctatcggtggtgtttgtgagggcagcaaagcggaacc 536 |||||||||||||||| || || ||||| || || ||||| | |||||| || || |||| Sbjct: 345 ggccatggtgggcaccgtcttgtctatccgtagtctttgttaaggcagccaaacgcaacc 404 Query: 537 gacagtcccgagttgtctccctaaagctggaaccttga 574 ||||||| || ||||| || || ||||| ||| ||||| Sbjct: 405 gacagtctcgtgttgtatctctcaagcttgaatcttga 442
>emb|BX823377.1|CNS0A5GP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS2ZG01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 744 Score = 99.6 bits (50), Expect = 2e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 213 ctccggagccgcttgatttcttcatatggactgtcgaggacgtcggcttgtggcttgaag 272 |||| ||||| |||||||||||||| |||||||| ||||| || || | ||||| || | Sbjct: 75 ctcccgagcctcttgatttcttcatctggactgttgaggatgttgggtcttggctcgagg 134 Query: 273 agataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaatggagagtatc 332 ||||||| ||||| |||||| | || |||| ||||||| ||||||||||||| |||| Sbjct: 135 agataaaccttgggggctaccgccagattttcaaagaaaatggtgtcaatggagaatatc 194 Query: 333 tagagagcttgtcgatgtttactaccgagcagat 366 |||| ||| |||| ||||||||||||||||||| Sbjct: 195 tagaaagcatgtctgtgtttactaccgagcagat 228
>emb|CT986388.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 625 Score = 79.8 bits (40), Expect = 1e-11 Identities = 205/260 (78%) Strand = Plus / Plus Query: 318 tcaatggagagtatctagagagcttgtcgatgtttactaccgagcagattctgcggttta 377 ||||||| |||||||| || ||| |||| | ||| || || |||||||| || ||||||| Sbjct: 37 tcaatggtgagtatctggaaagcatgtccacgttcacgactgagcagatacttcggttta 96 Query: 378 tcaggcggtgccatatgaaatggggagattttatcacattatgcaaagagttgaggcgca 437 |||| |||||| ||||||||||| || || || || | |||||||| | |||| | Sbjct: 97 tcagaaagtgccacatgaaatggggggacttcattacgctctgcaaagaactccggcgga 156 Query: 438 ttaaagtggcctgcctgaaaggggagcaagaagtccggaggccatggtgggcaccatcgt 497 |||| ||||| ||| ||||||| || || | |||||||||||||||||||| || |||| Sbjct: 157 ttaaggtggcatgcttgaaaggcgatcagaaggtccggaggccatggtgggctccgtcgt 216 Query: 498 gcctatcggtggtgtttgtgagggcagcaaagcggaaccgacagtcccgagttgtctccc 557 |||| ||| | || | ||||| |||||| ||||| ||| |||| || | ||||| || | Sbjct: 217 gcctctcgatagtttctgtgaaggcagcgaagcgcaacagacaatcaagggttgtttcac 276 Query: 558 taaagctggaaccttgatgc 577 |||| || ||||| |||||| Sbjct: 277 taaaactagaaccatgatgc 296
>emb|CT984730.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 722 Score = 79.8 bits (40), Expect = 1e-11 Identities = 205/260 (78%) Strand = Plus / Plus Query: 318 tcaatggagagtatctagagagcttgtcgatgtttactaccgagcagattctgcggttta 377 ||||||| |||||||| || ||| |||| | ||| || || |||||||| || ||||||| Sbjct: 146 tcaatggtgagtatctggaaagcatgtccacgttcacgactgagcagatacttcggttta 205 Query: 378 tcaggcggtgccatatgaaatggggagattttatcacattatgcaaagagttgaggcgca 437 |||| |||||| ||||||||||| || || || || | |||||||| | |||| | Sbjct: 206 tcagaaagtgccacatgaaatggggggacttcattacgctctgcaaagaactccggcgga 265 Query: 438 ttaaagtggcctgcctgaaaggggagcaagaagtccggaggccatggtgggcaccatcgt 497 |||| ||||| ||| ||||||| || || | |||||||||||||||||||| || |||| Sbjct: 266 ttaaggtggcatgcttgaaaggcgatcagaaggtccggaggccatggtgggctccgtcgt 325 Query: 498 gcctatcggtggtgtttgtgagggcagcaaagcggaaccgacagtcccgagttgtctccc 557 |||| ||| | || | ||||| |||||| ||||| ||| |||| || | ||||| || | Sbjct: 326 gcctctcgatagtttctgtgaaggcagcgaagcgcaacagacaatcaagggttgtttcac 385 Query: 558 taaagctggaaccttgatgc 577 |||| || ||||| |||||| Sbjct: 386 taaaactagaaccatgatgc 405
>emb|CT983417.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 721 Score = 79.8 bits (40), Expect = 1e-11 Identities = 205/260 (78%) Strand = Plus / Plus Query: 318 tcaatggagagtatctagagagcttgtcgatgtttactaccgagcagattctgcggttta 377 ||||||| |||||||| || ||| |||| | ||| || || |||||||| || ||||||| Sbjct: 146 tcaatggtgagtatctggaaagcatgtccacgttcacgactgagcagatacttcggttta 205 Query: 378 tcaggcggtgccatatgaaatggggagattttatcacattatgcaaagagttgaggcgca 437 |||| |||||| ||||||||||| || || || || | |||||||| | |||| | Sbjct: 206 tcagaaagtgccacatgaaatggggggacttcattacgctctgcaaagaactccggcgga 265 Query: 438 ttaaagtggcctgcctgaaaggggagcaagaagtccggaggccatggtgggcaccatcgt 497 |||| ||||| ||| ||||||| || || | |||||||||||||||||||| || |||| Sbjct: 266 ttaaggtggcatgcttgaaaggcgatcagaaggtccggaggccatggtgggctccgtcgt 325 Query: 498 gcctatcggtggtgtttgtgagggcagcaaagcggaaccgacagtcccgagttgtctccc 557 |||| ||| | || | ||||| |||||| ||||| ||| |||| || | ||||| || | Sbjct: 326 gcctctcgatagtttctgtgaaggcagcgaagcgcaacagacaatcaagggttgtttcac 385 Query: 558 taaagctggaaccttgatgc 577 |||| || ||||| |||||| Sbjct: 386 taaaactagaaccatgatgc 405
>emb|CT983194.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 757 Score = 79.8 bits (40), Expect = 1e-11 Identities = 205/260 (78%) Strand = Plus / Plus Query: 318 tcaatggagagtatctagagagcttgtcgatgtttactaccgagcagattctgcggttta 377 ||||||| |||||||| || ||| |||| | ||| || || |||||||| || ||||||| Sbjct: 192 tcaatggtgagtatctggaaagcatgtccacgttcacgactgagcagatacttcggttta 251 Query: 378 tcaggcggtgccatatgaaatggggagattttatcacattatgcaaagagttgaggcgca 437 |||| |||||| ||||||||||| || || || || | |||||||| | |||| | Sbjct: 252 tcagaaagtgccacatgaaatggggggacttcattacgctctgcaaagaactccggcgga 311 Query: 438 ttaaagtggcctgcctgaaaggggagcaagaagtccggaggccatggtgggcaccatcgt 497 |||| ||||| ||| ||||||| || || | |||||||||||||||||||| || |||| Sbjct: 312 ttaaggtggcatgcttgaaaggcgatcagaaggtccggaggccatggtgggctccgtcgt 371 Query: 498 gcctatcggtggtgtttgtgagggcagcaaagcggaaccgacagtcccgagttgtctccc 557 |||| ||| | || | ||||| |||||| ||||| ||| |||| || | ||||| || | Sbjct: 372 gcctctcgatagtttctgtgaaggcagcgaagcgcaacagacaatcaagggttgtttcac 431 Query: 558 taaagctggaaccttgatgc 577 |||| || ||||| |||||| Sbjct: 432 taaaactagaaccatgatgc 451
>emb|CT981161.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 628 Score = 79.8 bits (40), Expect = 1e-11 Identities = 205/260 (78%) Strand = Plus / Plus Query: 318 tcaatggagagtatctagagagcttgtcgatgtttactaccgagcagattctgcggttta 377 ||||||| |||||||| || ||| |||| | ||| || || |||||||| || ||||||| Sbjct: 37 tcaatggtgagtatctggaaagcatgtccacgttcacgactgagcagatacttcggttta 96 Query: 378 tcaggcggtgccatatgaaatggggagattttatcacattatgcaaagagttgaggcgca 437 |||| |||||| ||||||||||| || || || || | |||||||| | |||| | Sbjct: 97 tcagaaagtgccacatgaaatggggggacttcattacgctctgcaaagaactccggcgga 156 Query: 438 ttaaagtggcctgcctgaaaggggagcaagaagtccggaggccatggtgggcaccatcgt 497 |||| ||||| ||| ||||||| || || | |||||||||||||||||||| || |||| Sbjct: 157 ttaaggtggcatgcttgaaaggcgatcagaaggtccggaggccatggtgggctccgtcgt 216 Query: 498 gcctatcggtggtgtttgtgagggcagcaaagcggaaccgacagtcccgagttgtctccc 557 |||| ||| | || | ||||| |||||| ||||| ||| |||| || | ||||| || | Sbjct: 217 gcctctcgatagtttctgtgaaggcagcgaagcgcaacagacaatcaagggttgtttcac 276 Query: 558 taaagctggaaccttgatgc 577 |||| || ||||| |||||| Sbjct: 277 taaaactagaaccatgatgc 296
>emb|BX825228.1|CNS0A58A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL21ZE04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 637 Score = 75.8 bits (38), Expect = 2e-10 Identities = 125/154 (81%) Strand = Plus / Plus Query: 213 ctccggagccgcttgatttcttcatatggactgtcgaggacgtcggcttgtggcttgaag 272 |||| ||||| || ||||||||||| |||||||| ||||| || || | ||||| || | Sbjct: 123 ctcccgagcctctcgatttcttcatctggactgttgaggatgttgggtcttggctcgagg 182 Query: 273 agataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaatggagagtatc 332 ||||||| ||||| |||||| | || |||| ||||||| |||| |||||||| |||| Sbjct: 183 agataaaccttgggggctaccgccagattttcaaagaaaatggtgtgaatggagaatatc 242 Query: 333 tagagagcttgtcgatgtttactaccgagcagat 366 |||| ||| | || ||||||||||||||||||| Sbjct: 243 tagaaagcatttctgtgtttactaccgagcagat 276 Score = 48.1 bits (24), Expect = 0.051 Identities = 63/76 (82%) Strand = Plus / Plus Query: 477 ggccatggtgggcaccatcgtgcctatcggtggtgtttgtgagggcagcaaagcggaacc 536 |||||||||||||||| || || ||||| || || ||||| | |||||| || || |||| Sbjct: 387 ggccatggtgggcaccgtcttgtctatccgtagtctttgttaaggcagccaaacgcaacc 446 Query: 537 gacagtcccgagttgt 552 ||||||| || ||||| Sbjct: 447 gacagtctcgtgttgt 462
>gb|AY023480.1| Oryza sativa microsatellite MRG5805 containing (TCT)X8, genomic sequence Length = 224 Score = 73.8 bits (37), Expect = 9e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 191 agggagatgagccgcgggaggtctccggagccgcttgatttcttcatatggactgtcgag 250 |||||||||||||| ||| |||| ||||||||||| ||||||||||| ||||| |||||| Sbjct: 14 agggagatgagccgggggcggtcgccggagccgctggatttcttcatctggacagtcgag 73 Query: 251 g 251 | Sbjct: 74 g 74
>emb|CT986657.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 723 Score = 71.9 bits (36), Expect = 4e-09 Identities = 204/260 (78%) Strand = Plus / Plus Query: 318 tcaatggagagtatctagagagcttgtcgatgtttactaccgagcagattctgcggttta 377 ||||||| |||||||| || ||| |||| | ||| || || |||||||| || ||||||| Sbjct: 146 tcaatggtgagtatctggatagcatgtccacgttcacgactgagcagatacttcggttta 205 Query: 378 tcaggcggtgccatatgaaatggggagattttatcacattatgcaaagagttgaggcgca 437 |||| |||||| ||||||||||| || || || || | |||||||| | |||| | Sbjct: 206 tcagaatgtgccacatgaaatggggggacttcattacgctctgcaaagaactccggcgga 265 Query: 438 ttaaagtggcctgcctgaaaggggagcaagaagtccggaggccatggtgggcaccatcgt 497 |||| ||||| ||| ||||||| || || | ||||||||||| |||||||| || |||| Sbjct: 266 ttaaggtggcatgcttgaaaggcgatcagaaggtccggaggccgtggtgggctccgtcgt 325 Query: 498 gcctatcggtggtgtttgtgagggcagcaaagcggaaccgacagtcccgagttgtctccc 557 |||| ||| | || | ||||| |||||| ||||| ||| |||| || | ||||| || | Sbjct: 326 gcctctcgatagtctctgtgaaggcagcgaagcgcaacagacaatcaagggttgtttcac 385 Query: 558 taaagctggaaccttgatgc 577 |||| || ||||| |||||| Sbjct: 386 taaaactagaaccatgatgc 405
>gb|AC009176.5|ATAC009176 Arabidopsis thaliana chromosome III P1 MLP3 genomic sequence, complete sequence Length = 79296 Score = 71.9 bits (36), Expect = 4e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 263 tggcttgaagagataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaat 322 ||||| || |||||||| ||||| |||||| | || |||| ||||||| |||||||| Sbjct: 63549 tggctcgaggagataaaccttgggggctaccgccagattttcaaagaaaatggtgtcaat 63608 Query: 323 ggagagtatctagagagcttgtcgatgtttactaccgagcagat 366 ||||| |||||||| ||| |||| ||||||||||||||||||| Sbjct: 63609 ggagaatatctagaaagcatgtctgtgtttactaccgagcagat 63652 Score = 52.0 bits (26), Expect = 0.003 Identities = 80/98 (81%) Strand = Plus / Plus Query: 477 ggccatggtgggcaccatcgtgcctatcggtggtgtttgtgagggcagcaaagcggaacc 536 |||||||||||||||| || || ||||| || || ||||| | |||||| || || |||| Sbjct: 63846 ggccatggtgggcaccgtcttgtctatccgtagtctttgttaaggcagccaaacgcaacc 63905 Query: 537 gacagtcccgagttgtctccctaaagctggaaccttga 574 ||||||| || ||||| || || ||||| ||| ||||| Sbjct: 63906 gacagtctcgtgttgtatctctcaagcttgaatcttga 63943 Score = 46.1 bits (23), Expect = 0.20 Identities = 35/39 (89%) Strand = Plus / Plus Query: 213 ctccggagccgcttgatttcttcatatggactgtcgagg 251 |||| ||||| |||||||||||||| |||||||| |||| Sbjct: 62735 ctcccgagcctcttgatttcttcatctggactgttgagg 62773
>gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC F17A17 genomic sequence, complete sequence Length = 121054 Score = 71.9 bits (36), Expect = 4e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 263 tggcttgaagagataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaat 322 ||||| || |||||||| ||||| |||||| | || |||| ||||||| |||||||| Sbjct: 28583 tggctcgaggagataaaccttgggggctaccgccagattttcaaagaaaatggtgtcaat 28642 Query: 323 ggagagtatctagagagcttgtcgatgtttactaccgagcagat 366 ||||| |||||||| ||| |||| ||||||||||||||||||| Sbjct: 28643 ggagaatatctagaaagcatgtctgtgtttactaccgagcagat 28686 Score = 52.0 bits (26), Expect = 0.003 Identities = 80/98 (81%) Strand = Plus / Plus Query: 477 ggccatggtgggcaccatcgtgcctatcggtggtgtttgtgagggcagcaaagcggaacc 536 |||||||||||||||| || || ||||| || || ||||| | |||||| || || |||| Sbjct: 28880 ggccatggtgggcaccgtcttgtctatccgtagtctttgttaaggcagccaaacgcaacc 28939 Query: 537 gacagtcccgagttgtctccctaaagctggaaccttga 574 ||||||| || ||||| || || ||||| ||| ||||| Sbjct: 28940 gacagtctcgtgttgtatctctcaagcttgaatcttga 28977 Score = 46.1 bits (23), Expect = 0.20 Identities = 35/39 (89%) Strand = Plus / Plus Query: 213 ctccggagccgcttgatttcttcatatggactgtcgagg 251 |||| ||||| |||||||||||||| |||||||| |||| Sbjct: 27769 ctcccgagcctcttgatttcttcatctggactgttgagg 27807
>emb|CT986066.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 586 Score = 56.0 bits (28), Expect = 2e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 470 gtccggaggccatggtgggcaccatcgtgcctatcggtggtgtttgtgagggcagcaaag 529 |||||||||||||||||||| || |||||||| ||| | || | ||||| |||||| ||| Sbjct: 167 gtccggaggccatggtgggctccgtcgtgcctctcgatagtttctgtgaaggcagcgaag 226 Query: 530 cggaaccgacagtcccgagttgtctccctaaagctggaaccttgatgc 577 || ||| |||| || | ||||| || ||||| || ||||| |||||| Sbjct: 227 cgcaacagacaatcaagggttgtttcactaaaactagaaccatgatgc 274
>emb|CT984541.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 586 Score = 56.0 bits (28), Expect = 2e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 470 gtccggaggccatggtgggcaccatcgtgcctatcggtggtgtttgtgagggcagcaaag 529 |||||||||||||||||||| || |||||||| ||| | || | ||||| |||||| ||| Sbjct: 167 gtccggaggccatggtgggctccgtcgtgcctctcgatagtttctgtgaaggcagcgaag 226 Query: 530 cggaaccgacagtcccgagttgtctccctaaagctggaaccttgatgc 577 || ||| |||| || | ||||| || ||||| || ||||| |||||| Sbjct: 227 cgcaacagacaatcaagggttgtttcactaaaactagaaccatgatgc 274
>emb|CT981751.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 586 Score = 56.0 bits (28), Expect = 2e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 470 gtccggaggccatggtgggcaccatcgtgcctatcggtggtgtttgtgagggcagcaaag 529 |||||||||||||||||||| || |||||||| ||| | || | ||||| |||||| ||| Sbjct: 167 gtccggaggccatggtgggctccgtcgtgcctctcgatagtttctgtgaaggcagcgaag 226 Query: 530 cggaaccgacagtcccgagttgtctccctaaagctggaaccttgatgc 577 || ||| |||| || | ||||| || ||||| || ||||| |||||| Sbjct: 227 cgcaacagacaatcaagggttgtttcactaaaactagaaccatgatgc 274
>emb|CT981474.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 586 Score = 56.0 bits (28), Expect = 2e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 470 gtccggaggccatggtgggcaccatcgtgcctatcggtggtgtttgtgagggcagcaaag 529 |||||||||||||||||||| || |||||||| ||| | || | ||||| |||||| ||| Sbjct: 167 gtccggaggccatggtgggctccgtcgtgcctctcgatagtttctgtgaaggcagcgaag 226 Query: 530 cggaaccgacagtcccgagttgtctccctaaagctggaaccttgatgc 577 || ||| |||| || | ||||| || ||||| || ||||| |||||| Sbjct: 227 cgcaacagacaatcaagggttgtttcactaaaactagaaccatgatgc 274
>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13, complete sequence Length = 102842 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Plus Query: 116 cgtcgcgtccctgccatctccaccccgtccgcgatctcgggc 157 |||| ||||||||| ||||||||||||| |||||||||||| Sbjct: 38405 cgtcccgtccctgctgtctccaccccgtcagcgatctcgggc 38446
>emb|CT571263.1| Medicago truncatula chromosome 5 clone mte1-7c20, COMPLETE SEQUENCE Length = 127003 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Plus Query: 218 gagccgcttgatttcttcatatggactgtcgagg 251 |||||||||||||||||||| |||||||| |||| Sbjct: 21907 gagccgcttgatttcttcatctggactgttgagg 21940 Score = 48.1 bits (24), Expect = 0.051 Identities = 36/40 (90%) Strand = Plus / Plus Query: 453 tgaaaggggagcaagaagtccggaggccatggtgggcacc 492 |||||||||||||| |||| ||| |||| ||||||||||| Sbjct: 25297 tgaaaggggagcaaaaagtgcggcggccgtggtgggcacc 25336
>gb|AC189454.1| Brassica rapa subsp. pekinensis clone KBrB072L17, complete sequence Length = 62227 Score = 50.1 bits (25), Expect = 0.013 Identities = 70/85 (82%) Strand = Plus / Plus Query: 477 ggccatggtgggcaccatcgtgcctatcggtggtgtttgtgagggcagcaaagcggaacc 536 |||||||||||||||| || || ||||| || || ||||| | ||| || ||||| |||| Sbjct: 10753 ggccatggtgggcaccgtcctgtctatcagtagtctttgttaaggccgctaagcgcaacc 10812 Query: 537 gacagtcccgagttgtctccctaaa 561 ||||||| || ||||| || ||||| Sbjct: 10813 gacagtctcgtgttgtatctctaaa 10837
>dbj|AP008952.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT45D07, TM0932b, complete sequence Length = 74001 Score = 50.1 bits (25), Expect = 0.013 Identities = 34/37 (91%) Strand = Plus / Plus Query: 453 tgaaaggggagcaagaagtccggaggccatggtgggc 489 |||||||||||||| ||||||| ||||||||||||| Sbjct: 68150 tgaaaggggagcaaaaagtccgacggccatggtgggc 68186 Score = 44.1 bits (22), Expect = 0.80 Identities = 31/34 (91%) Strand = Plus / Plus Query: 218 gagccgcttgatttcttcatatggactgtcgagg 251 ||||| |||||||||||||| |||||||| |||| Sbjct: 64868 gagcctcttgatttcttcatctggactgttgagg 64901 Score = 44.1 bits (22), Expect = 0.80 Identities = 34/38 (89%) Strand = Plus / Plus Query: 386 tgccatatgaaatggggagattttatcacattatgcaa 423 ||||| |||||||||||||| || |||||||| ||||| Sbjct: 66881 tgccacatgaaatggggagacttcatcacattgtgcaa 66918
>dbj|AP008949.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT44M23, TM1572a, complete sequence Length = 48924 Score = 50.1 bits (25), Expect = 0.013 Identities = 34/37 (91%) Strand = Plus / Plus Query: 453 tgaaaggggagcaagaagtccggaggccatggtgggc 489 |||||||||||||| ||||||| ||||||||||||| Sbjct: 22021 tgaaaggggagcaaaaagtccgacggccatggtgggc 22057 Score = 44.1 bits (22), Expect = 0.80 Identities = 31/34 (91%) Strand = Plus / Plus Query: 218 gagccgcttgatttcttcatatggactgtcgagg 251 ||||| |||||||||||||| |||||||| |||| Sbjct: 18739 gagcctcttgatttcttcatctggactgttgagg 18772 Score = 44.1 bits (22), Expect = 0.80 Identities = 34/38 (89%) Strand = Plus / Plus Query: 386 tgccatatgaaatggggagattttatcacattatgcaa 423 ||||| |||||||||||||| || |||||||| ||||| Sbjct: 20752 tgccacatgaaatggggagacttcatcacattgtgcaa 20789
>gb|AC182567.2| Mimulus guttatus clone MGBa-50E20, complete sequence Length = 158263 Score = 48.1 bits (24), Expect = 0.051 Identities = 39/44 (88%) Strand = Plus / Plus Query: 208 gaggtctccggagccgcttgatttcttcatatggactgtcgagg 251 |||||| || ||||| |||||||||||||| |||||||| |||| Sbjct: 25110 gaggtcacctgagcctcttgatttcttcatttggactgttgagg 25153 Score = 46.1 bits (23), Expect = 0.20 Identities = 56/67 (83%) Strand = Plus / Plus Query: 342 tgtcgatgtttactaccgagcagattctgcggtttatcaggcggtgccatatgaaatggg 401 ||||||||||||| || || ||||| || ||||| || ||| |||||| |||||||||| Sbjct: 25805 tgtcgatgtttacgactgaacagatccttcggttcataaggaagtgccacatgaaatggg 25864 Query: 402 gagattt 408 | ||||| Sbjct: 25865 gtgattt 25871
>ref|XM_868299.1| PREDICTED: Bos taurus similar to RAB18, member RAS oncogene family (predicted) (LOC616304), mRNA Length = 2385 Score = 48.1 bits (24), Expect = 0.051 Identities = 24/24 (100%) Strand = Plus / Minus Query: 437 attaaagtggcctgcctgaaaggg 460 |||||||||||||||||||||||| Sbjct: 1854 attaaagtggcctgcctgaaaggg 1831
>ref|NM_001054473.1| Oryza sativa (japonica cultivar-group) Os02g0718200 (Os02g0718200) mRNA, complete cds Length = 426 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 187 gaggagggagatgagccgcggg 208 |||||||||||||||||||||| Sbjct: 367 gaggagggagatgagccgcggg 388
>gb|AC103597.21| Mus musculus chromosome 18, clone RP23-435G4, complete sequence Length = 221083 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 49 cctcacccacccaacccctccc 70 |||||||||||||||||||||| Sbjct: 473 cctcacccacccaacccctccc 494
>gb|AC126695.4| Mus musculus BAC clone RP23-313D2 from 18, complete sequence Length = 171427 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 cctcacccacccaacccctccc 70 |||||||||||||||||||||| Sbjct: 99148 cctcacccacccaacccctccc 99127
>ref|XM_742028.1| Aspergillus fumigatus Af293 amino acid permease (Afu8g00840) partial mRNA Length = 1557 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 478 gccatggtgggcaccatcgtgc 499 |||||||||||||||||||||| Sbjct: 802 gccatggtgggcaccatcgtgc 823
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 187 gaggagggagatgagccgcggg 208 |||||||||||||||||||||| Sbjct: 29824039 gaggagggagatgagccgcggg 29824060
>gb|AC159639.2| Mus musculus BAC clone RP24-79M15 from chromosome 12, complete sequence Length = 220032 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 689 tctctctaccctgttttgtatt 710 |||||||||||||||||||||| Sbjct: 99854 tctctctaccctgttttgtatt 99833
>gb|AC151713.4| Mus musculus BAC clone RP24-100K9 from chromosome 8, complete sequence Length = 199295 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 54 cccacccaacccctcccctctc 75 |||||||||||||||||||||| Sbjct: 99429 cccacccaacccctcccctctc 99450
>dbj|AP004098.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ2056_H01 Length = 123428 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 187 gaggagggagatgagccgcggg 208 |||||||||||||||||||||| Sbjct: 80384 gaggagggagatgagccgcggg 80405
>gb|AC105327.13| Mus musculus chromosome 8, clone RP24-323I19, complete sequence Length = 215363 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 cccacccaacccctcccctctc 75 |||||||||||||||||||||| Sbjct: 6439 cccacccaacccctcccctctc 6418
>gb|AC163217.9| Mus musculus chromosome 1, clone RP23-474A1, complete sequence Length = 184175 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 ataaatcttggtggctacaga 295 ||||||||||||||||||||| Sbjct: 59206 ataaatcttggtggctacaga 59186
>gb|AC099596.6| Mus musculus chromosome 15, clone RP23-26P23, complete sequence Length = 210022 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 agattttatcacattatgcaa 423 ||||||||||||||||||||| Sbjct: 68062 agattttatcacattatgcaa 68082
>gb|AC160533.6| Mus musculus chromosome 5, clone RP24-242L17, complete sequence Length = 170409 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ataaatcttggtggctacaga 295 ||||||||||||||||||||| Sbjct: 107935 ataaatcttggtggctacaga 107955
>gb|AC113044.9| Mus musculus chromosome 1, clone RP23-243J5, complete sequence Length = 186799 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ataaatcttggtggctacaga 295 ||||||||||||||||||||| Sbjct: 45025 ataaatcttggtggctacaga 45045
>emb|BX294141.1| Rhodopirellula baltica SH 1 complete genome; segment 9/24 Length = 299350 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 gtccgcgatctcgggcaccgt 162 ||||||||||||||||||||| Sbjct: 95470 gtccgcgatctcgggcaccgt 95450
>gb|AC140001.8| Mus musculus chromosome 5, clone RP24-276E6, complete sequence Length = 130466 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ataaatcttggtggctacaga 295 ||||||||||||||||||||| Sbjct: 106348 ataaatcttggtggctacaga 106368 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 133,476,993 Number of extensions: 6874714 Number of successful extensions: 132471 Number of sequences better than 10.0: 51 Number of HSP's gapped: 132464 Number of HSP's successfully gapped: 74 Length of query: 835 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 813 Effective length of database: 18,508,616,841 Effective search space: 15047505491733 Effective search space used: 15047505491733 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)