ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf85h08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os12g0188900:Os12g0188900 | 573 | e-163 | 2 | AK069859:Os04g0650600 | 107 | 3e-23 | 3 | AK120163:Os08g0377400 | 65 | 1e-10 | 4 | AK105467:Os08g0377400 | 65 | 1e-10 | 5 | Os02g0709000:Os02g0709000 | 47 | 6e-05 | 6 | AK103077:Os01g0513900 | 34 | 0.42 | 7 | Os02g0261300:Os02g0261300 | 31 | 3.6 | 8 | AK111933:Os02g0695200 | 31 | 3.6 | 9 | AK111720:Os02g0695200 | 31 | 3.6 | 10 | AK102575:Os04g0576700 | 30 | 4.6 | 11 | AK064121:Os11g0213800 | 30 | 6.1 | 12 | AK102208:Os08g0547500 | 30 | 7.9 | 13 | AK099692:Os06g0483900 | 30 | 7.9 | 14 | AK065731:Os08g0547500 | 30 | 7.9 |
|---|
>Os12g0188900:Os12g0188900 | Length = 393 Score = 573 bits (1476), Expect = e-163 Identities = 298/384 (77%), Positives = 330/384 (85%), Gaps = 20/384 (5%) Frame = +2 Query: 602 AAPSGSSPYEILGLDCEM-------------------CVTAAGFELTRVTLVDIKGEVIL 724 AAP+ S+ Y++ G D CVTAAGFELTRVTLVDIKGEV+L Sbjct: 10 AAPASSTYYDVYGPDDVQGLVTWVIGDGMLPSWVFVKCVTAAGFELTRVTLVDIKGEVVL 69 Query: 725 DKLVKPTNPITDYNTRFSGITAEMLSDVTTTLQEIQEEFVGLVYKETILVGHSLENDLLA 904 DKLVKP NPITDYNTRFSGITAEML+DVTTTLQEIQEEFVGLV+KET+LVGHSLENDL+A Sbjct: 70 DKLVKPANPITDYNTRFSGITAEMLADVTTTLQEIQEEFVGLVHKETVLVGHSLENDLMA 129 Query: 905 LRISHDLVIDTAVLYKYNRGPRCKIALRVLANKYLSRVIQNTGSGHDSVEDARAALDLAF 1084 LRISHDL+IDTAVLYK+NRG R KIALRVLA K+L+R IQNTGSGHDSVEDA+AAL+LA Sbjct: 130 LRISHDLIIDTAVLYKHNRGHRFKIALRVLAKKFLNREIQNTGSGHDSVEDAKAALELAL 189 Query: 1085 LKIKYGPDFGSPPSFSRRKLASILHECGKRSSLIDEVFVLDRYSDASSNSIAVFSDDNAL 1264 LKIKYGPDFGSPPS SRRKLASILHE GK+ SLID+ VL+RYSDAS NSIAVFSDD+AL Sbjct: 190 LKIKYGPDFGSPPSTSRRKLASILHESGKKCSLIDDASVLERYSDASCNSIAVFSDDDAL 249 Query: 1265 SRSMKEVKNDKISFVWTQFSGLISYLRKRAEDPVKLKSCVAEAIALKTCDRKTARKRAK- 1441 SRSMKEVKNDK+SFVWTQFS LISYLR RA+DP K+KSCVAEAIAL+TCDRKTA+KR K Sbjct: 250 SRSMKEVKNDKVSFVWTQFSKLISYLRTRAQDPDKVKSCVAEAIALQTCDRKTAQKRKKH 309 Query: 1442 QICPELKGILSELDKKIRKLHDTLPENAMFIICTGHGDTPLVQRLKKMLNHGEKTVDSRE 1621 Q CPELK IL LDKKIRKL+ LP+NAM IIC+GHGDTPLVQRL+KML E+TV+SRE Sbjct: 310 QTCPELKEILIGLDKKIRKLYSILPDNAMLIICSGHGDTPLVQRLRKMLKQEEETVESRE 369 Query: 1622 NIVHALEDLQAQAEVALCFCCVKH 1693 +IV ALED+QAQAEVALCFCCVKH Sbjct: 370 SIVKALEDIQAQAEVALCFCCVKH 393 Score = 65.9 bits (159), Expect = 1e-10 Identities = 40/84 (47%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Frame = +2 Query: 50 MSTPSDG--AAPAASTYYDVFGPDAKPDVIFKEATSDSTLNLQDVQGLVTWVIGEGMPPS 223 M+ PS AAPA+STYYDV+GPD DVQGLVTWVIG+GM PS Sbjct: 1 MAAPSGSGEAAPASSTYYDVYGPD-------------------DVQGLVTWVIGDGMLPS 41 Query: 224 WVFVKNKPL----ITKVVLLYVPG 283 WVFVK +T+V L+ + G Sbjct: 42 WVFVKCVTAAGFELTRVTLVDIKG 65
>AK069859:Os04g0650600 | Length = 463 Score = 107 bits (267), Expect = 3e-23 Identities = 63/170 (37%), Positives = 95/170 (55%), Gaps = 2/170 (1%) Frame = +2 Query: 632 ILGLDCEMCVTAAGFE-LTRVTLVDIKGEVILDKLVKPTNPITDYNTRFSGITAEMLSDV 808 +L +DCEM + G E L RV +V+ EV LD+LV P + DY T +G++ + L V Sbjct: 142 MLAIDCEMVLCHDGTEALVRVCVVNSNLEVKLDELVNPLKAVADYRTSITGLSKKDLKGV 201 Query: 809 TTTLQEIQEEFVGLVYKETILVGHSLENDLLALRISHDLVIDTAVLYKY-NRGPRCKIAL 985 T +L ++Q+ L+ K IL+GHSL DL AL+ + VIDTA ++KY N +L Sbjct: 202 TCSLVDVQKSLKKLLSKGKILIGHSLSKDLHALKFDYSRVIDTAYIFKYANLPTTASASL 261 Query: 986 RVLANKYLSRVIQNTGSGHDSVEDARAALDLAFLKIKYGPDFGSPPSFSR 1135 L L ++ G H+ ++DA AA++L K+K+G F P +R Sbjct: 262 NSLCKSVLGYAVREEGEPHNCLKDAEAAMNLVLAKLKHG--FNDPIEIAR 309
>AK120163:Os08g0377400 | Length = 286 Score = 65.5 bits (158), Expect = 1e-10 Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 5/166 (3%) Frame = +2 Query: 590 VPTVAAPSGSSPYEILGLDCEMCVTAAGFE---LTRVTLVDIKGEVILDKLVKPTNPITD 760 V V +S + + +DCEM AG L RVTLV+ G V+ D+ +P I D Sbjct: 79 VKLVPTSDDTSLTKAVAVDCEMVGVGAGGSKSALGRVTLVNSWGNVVYDEYTRPVERIVD 138 Query: 761 YNTRFSGITAEMLSDVTTTLQEIQEEFVGLVYKETILVGHSLENDLLALRISHDL--VID 934 Y T SGI + ++ +Q++ L+ K ILVGH+L +DL L + H + D Sbjct: 139 YRTHISGIRPKHMNK-AKDFWVVQKDVAELI-KGRILVGHALHHDLKVLLLGHPKKDIRD 196 Query: 935 TAVLYKYNRGPRCKIALRVLANKYLSRVIQNTGSGHDSVEDARAAL 1072 T+ Y+ R + +L+ L + L IQ H +EDARAA+ Sbjct: 197 TSE-YEVFRREGKRRSLKDLTAQVLGAKIQQ--KEHCPIEDARAAM 239
>AK105467:Os08g0377400 | Length = 286 Score = 65.5 bits (158), Expect = 1e-10 Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 5/166 (3%) Frame = +2 Query: 590 VPTVAAPSGSSPYEILGLDCEMCVTAAGFE---LTRVTLVDIKGEVILDKLVKPTNPITD 760 V V +S + + +DCEM AG L RVTLV+ G V+ D+ +P I D Sbjct: 79 VKLVPTSDDTSLTKAVAVDCEMVGVGAGGSKSALGRVTLVNSWGNVVYDEYTRPVERIVD 138 Query: 761 YNTRFSGITAEMLSDVTTTLQEIQEEFVGLVYKETILVGHSLENDLLALRISHDL--VID 934 Y T SGI + ++ +Q++ L+ K ILVGH+L +DL L + H + D Sbjct: 139 YRTHISGIRPKHMNK-AKDFWVVQKDVAELI-KGRILVGHALHHDLKVLLLGHPKKDIRD 196 Query: 935 TAVLYKYNRGPRCKIALRVLANKYLSRVIQNTGSGHDSVEDARAAL 1072 T+ Y+ R + +L+ L + L IQ H +EDARAA+ Sbjct: 197 TSE-YEVFRREGKRRSLKDLTAQVLGAKIQQ--KEHCPIEDARAAM 239
>Os02g0709000:Os02g0709000 | Length = 336 Score = 46.6 bits (109), Expect = 6e-05 Identities = 51/183 (27%), Positives = 74/183 (40%), Gaps = 19/183 (10%) Frame = +2 Query: 587 FVPTVAAPSGSSPYEILGLDCEMCVTAAGFEL---TRVTLVDIKGEVILDKLVKPTNPIT 757 F P GS + + C+M + L RV L+ VI VKPT +T Sbjct: 102 FTRAAPMPRGSYGGRAVAMACKMVGGGSDGSLDICARVCLIGEDENVIFQTYVKPTTTVT 161 Query: 758 DYNTRFSGITAEMLSDVTTTLQEIQEEFVGLVY--------------KETILVGHSLEND 895 +Y +GI E L D L+ +Q ++ + ILVGH LE++ Sbjct: 162 NYRYEMTGIRPEYLRD-AMPLKLVQRRIQDILCNGEPLWKIRPRSSGRARILVGHGLEHE 220 Query: 896 L--LALRISHDLVIDTAVLYKYNRGPRCKIALRVLANKYLSRVIQNTGSGHDSVEDARAA 1069 L L L ++ DTA + + +L+ L YL I +TG D ED AA Sbjct: 221 LERLGLEYPAFMIRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDI-HTGI-QDPYEDCVAA 278 Query: 1070 LDL 1078 + L Sbjct: 279 MRL 281
>AK103077:Os01g0513900 | Length = 954 Score = 33.9 bits (76), Expect = 0.42 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = +2 Query: 59 PSDGAAPAASTYYDVFGPDAKPDVIFKEATSDSTLN 166 P D AAP + T+ VFGP ++ +V+++E D ++ Sbjct: 71 PQDRAAPTSYTFDKVFGPASQTEVVYEEGAKDVAMS 106
>Os02g0261300:Os02g0261300 | Length = 745 Score = 30.8 bits (68), Expect = 3.6 Identities = 17/38 (44%), Positives = 22/38 (57%) Frame = +2 Query: 1424 ARKRAKQICPELKGILSELDKKIRKLHDTLPENAMFII 1537 AR+R + P L+G+L EL KK + D L E FII Sbjct: 54 ARERRDKSNPGLQGLLEELRKKADEAEDVLDELQYFII 91
>AK111933:Os02g0695200 | Length = 340 Score = 30.8 bits (68), Expect = 3.6 Identities = 23/93 (24%), Positives = 39/93 (41%) Frame = +2 Query: 440 SQTSNQSNESDGGKLSSLADLKDIPFSVKYYTLSKKDLEDNGYPLSLPGFVPTVAAPSGS 619 S T+ +N + G P +V + ++D++ + + P P VAAP Sbjct: 152 STTTAANNNNSGDTAGEQCGTSKEPENVDV-SFFEQDIDISDMLVDAPTEAPLVAAPMPP 210 Query: 620 SPYEILGLDCEMCVTAAGFELTRVTLVDIKGEV 718 SP L CV A EL + +DI+ ++ Sbjct: 211 SPCSSSSLTTTTCVGAVSDELLDLPEIDIEPDI 243
>AK111720:Os02g0695200 | Length = 340 Score = 30.8 bits (68), Expect = 3.6 Identities = 23/93 (24%), Positives = 39/93 (41%) Frame = +2 Query: 440 SQTSNQSNESDGGKLSSLADLKDIPFSVKYYTLSKKDLEDNGYPLSLPGFVPTVAAPSGS 619 S T+ +N + G P +V + ++D++ + + P P VAAP Sbjct: 152 STTTAANNNNSGDTAGEQCGTSKEPENVDV-SFFEQDIDISDMLVDAPTEAPLVAAPMPP 210 Query: 620 SPYEILGLDCEMCVTAAGFELTRVTLVDIKGEV 718 SP L CV A EL + +DI+ ++ Sbjct: 211 SPCSSSSLTTTTCVGAVSDELLDLPEIDIEPDI 243
>AK102575:Os04g0576700 | Length = 418 Score = 30.4 bits (67), Expect = 4.6 Identities = 20/70 (28%), Positives = 32/70 (45%) Frame = +2 Query: 833 EEFVGLVYKETILVGHSLENDLLALRISHDLVIDTAVLYKYNRGPRCKIALRVLANKYLS 1012 ++F+G V T L+ S E D +A S L + L YN KI +++ + Sbjct: 255 DDFIGAV-TSTDLLASSPEIDYMAANQSQSLFYAESALKHYNNNDENKIKYELISAITSN 313 Query: 1013 RVIQNTGSGH 1042 +I +G GH Sbjct: 314 AIIDRSGYGH 323
>AK064121:Os11g0213800 | Length = 407 Score = 30.0 bits (66), Expect = 6.1 Identities = 27/97 (27%), Positives = 45/97 (46%) Frame = +2 Query: 1226 SNSIAVFSDDNALSRSMKEVKNDKISFVWTQFSGLISYLRKRAEDPVKLKSCVAEAIALK 1405 ++ I + + +S +KE+ N +SF +T+ S SY R D + S V EA+ + Sbjct: 111 AHKITLANKMKTISDELKEITNQHLSFRFTEDS---SYKEHRVTDKRETSSKVEEALVV- 166 Query: 1406 TCDRKTARKRAKQICPELKGILSELDKKIRKLHDTLP 1516 +TA KR I+S L K++ + LP Sbjct: 167 ---GRTAEKRI---------IISSLSKRMTEETVILP 191
>AK102208:Os08g0547500 | Length = 986 Score = 29.6 bits (65), Expect = 7.9 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +2 Query: 53 STPSDGAAPAASTYYDVFGPDAKPDVIFKEATSDSTLNLQDVQGLVTWVIGEGMPPS 223 + P P A TY VFGPD+ +++E + L++ V G+ + + G S Sbjct: 55 TVPERAMFPTAYTYDRVFGPDSSTRQVYEEGAKEVALSV--VSGINSSIFAYGQTSS 109
>AK099692:Os06g0483900 | Length = 330 Score = 29.6 bits (65), Expect = 7.9 Identities = 30/131 (22%), Positives = 51/131 (38%), Gaps = 9/131 (6%) Frame = +2 Query: 1307 VWTQFSGLISYLRKRAEDPVKLKSCV---------AEAIALKTCDRKTARKRAKQICPEL 1459 VW +FSG + R ++ + +++CV E A+ D+ + K Sbjct: 204 VWVRFSGFGA----RDDEWIDVRTCVRQRSHPCVSTECAAVLPGDQILCFQEGKHQALYF 259 Query: 1460 KGILSELDKKIRKLHDTLPENAMFIICTGHGDTPLVQRLKKMLNHGEKTVDSRENIVHAL 1639 + + K+ HD F++C H D+ + L+KM E D R I+HA Sbjct: 260 DAHVLDAQKR---RHDARGCRCRFLVCYDHDDSEEIVPLRKMCRRPE--TDYRLEILHAA 314 Query: 1640 EDLQAQAEVAL 1672 A E + Sbjct: 315 GAANAAKEAVV 325
>AK065731:Os08g0547500 | Length = 1003 Score = 29.6 bits (65), Expect = 7.9 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +2 Query: 53 STPSDGAAPAASTYYDVFGPDAKPDVIFKEATSDSTLNLQDVQGLVTWVIGEGMPPS 223 + P P A TY VFGPD+ +++E + L++ V G+ + + G S Sbjct: 71 TVPERAMFPTAYTYDRVFGPDSSTRQVYEEGAKEVALSV--VSGINSSIFAYGQTSS 125 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 56,816,388 Number of extensions: 1303633 Number of successful extensions: 3586 Number of sequences better than 10.0: 14 Number of HSP's gapped: 3579 Number of HSP's successfully gapped: 15 Length of query: 646 Length of database: 15,399,855 Length adjustment: 107 Effective length of query: 539 Effective length of database: 11,115,468 Effective search space: 5991237252 Effective search space used: 5991237252 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
