ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf85e12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os10g0395500:Os10g0395500 | 221 | 3e-58 | 2 | AK106772:Os01g0339600 | 122 | 4e-29 | 3 | AK064116:Os10g0396100 | 32 | 0.35 | 4 | AK069019:Os05g0199100 | 32 | 0.60 | 5 | AK071792:Os04g0670000 | 30 | 2.3 | 6 | AK072544:Os02g0752300 | 29 | 3.0 | 7 | AK102343:Os02g0743400 | 29 | 3.0 | 8 | AK099634:Os02g0743400 | 29 | 3.0 | 9 | AF056027:Os02g0743400 | 29 | 3.0 | 10 | AK109718:Os01g0659800 | 29 | 3.9 | 11 | AK099091:Os07g0247000 | 29 | 3.9 | 12 | AK072232:Os07g0247000 | 29 | 3.9 | 13 | Os06g0280500:Os06g0280500 | 28 | 5.1 | 14 | AK120751:Os01g0730900 | 28 | 5.1 | 15 | Os07g0621900:Os07g0621900 | 28 | 6.7 | 16 | AK069092:Os05g0276100 | 28 | 6.7 | 17 | AK064101:Os08g0462300 | 28 | 8.7 |
|---|
>Os10g0395500:Os10g0395500 | Length = 130 Score = 221 bits (564), Expect = 3e-58 Identities = 109/130 (83%), Positives = 118/130 (90%) Frame = +1 Query: 199 MEMHTGSAQAGGRFPVPHKSLSLDIKGNKTDIVISKYEDNFLVIVTQIGCMGTILAAKKD 378 MEM S Q +FPVPHKSLSLDI GNKTDIVISKYEDNF+V+VTQIGCMGTILAA+KD Sbjct: 1 MEMGMNSVQPNAQFPVPHKSLSLDINGNKTDIVISKYEDNFMVMVTQIGCMGTILAARKD 60 Query: 379 ESVFSDPTYNVSVLFGKRDEPLLLACARQLIEHISGSGSARPLVISLGLKDHSQGTLKDV 558 ESVFSDPTYNVSVLFGKRDEPLLLACARQLIEHISGSGSAR L+ISLGLKDHSQ T+K + Sbjct: 61 ESVFSDPTYNVSVLFGKRDEPLLLACARQLIEHISGSGSARSLMISLGLKDHSQATMKYI 120 Query: 559 VSAIVDNRLW 588 VS I++NRLW Sbjct: 121 VSTIIENRLW 130
>AK106772:Os01g0339600 | Length = 82 Score = 122 bits (307), Expect(2) = 4e-29 Identities = 62/70 (88%), Positives = 66/70 (94%) Frame = +1 Query: 271 IKGNKTDIVISKYEDNFLVIVTQIGCMGTILAAKKDESVFSDPTYNVSVLFGKRDEPLLL 450 I GNKTDIVISKYE +F+V+VTQIGCMGTILAA+KDESVFSDPTYN VLFGKRDEPLLL Sbjct: 14 IYGNKTDIVISKYEGSFMVMVTQIGCMGTILAARKDESVFSDPTYN--VLFGKRDEPLLL 71 Query: 451 ACARQLIEHI 480 ACARQLIEHI Sbjct: 72 ACARQLIEHI 81 Score = 23.5 bits (49), Expect(2) = 4e-29 Identities = 8/10 (80%), Positives = 9/10 (90%) Frame = +2 Query: 242 LCRTSPSPWI 271 +CRTSPS WI Sbjct: 5 MCRTSPSRWI 14
>AK064116:Os10g0396100 | Length = 425 Score = 32.3 bits (72), Expect = 0.35 Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 11/71 (15%) Frame = -2 Query: 432 PLPKKNRYIVGWIREDTFIFLSS*YGSHAPNLCHNDQKVVF-----------VFADDNVG 286 P+P +I G+ DTF F H CHN KV+F A D + Sbjct: 154 PMPDGGEFIAGYAHPDTFAF-------HLMYCCHNQGKVIFQVIKAGDSQWREIAADRLA 206 Query: 285 LVALDIQGEGL 253 + +D +G+ Sbjct: 207 ISGIDFDKQGI 217
>AK069019:Os05g0199100 | Length = 329 Score = 31.6 bits (70), Expect = 0.60 Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 12/58 (20%) Frame = -2 Query: 249 RHREAATCLRRPRMHLHLRGQADRGTA------------CTEGEPTGRIGRRRPVGSG 112 R R+ T RPR H R R A CT G+ TGR RRR G+G Sbjct: 33 RRRQWPTASTRPRSPTHRRQWRTRAAAARRRRSRRPSRRCTSGQSTGRRRRRRSGGAG 90
>AK071792:Os04g0670000 | Length = 199 Score = 29.6 bits (65), Expect = 2.3 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +1 Query: 286 TDIVISKYEDNFLVIVTQIGCMGTILAAKKDESVF 390 +D+V+ K D LV + ++ +G +A K+D SVF Sbjct: 89 SDVVVEKAADRALVWINKVLAVGHDIAIKRDRSVF 123
>AK072544:Os02g0752300 | Length = 329 Score = 29.3 bits (64), Expect = 3.0 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +3 Query: 192 RADGDAYGVCAGRWPLPCAAQVPLLGYQGQQDRHCHQQ 305 R+ GD Y V AGR+ L AA++ YQ Q+ H + Sbjct: 254 RSQGDEYSVNAGRYNLKRAAEMEFELYQQQRSLFLHTE 291
>AK102343:Os02g0743400 | Length = 595 Score = 29.3 bits (64), Expect = 3.0 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = -1 Query: 277 P*YPRRGTCAAQGSGHLPAQTPYASPSARPSGSRNRVHRGGTNGTD 140 P YP + AA +GH PA P + S+ P G++ G G D Sbjct: 297 PKYPLPASNAAPMAGHYPAPNP--AVSSAPKGAKKAATNGQAKGED 340
>AK099634:Os02g0743400 | Length = 595 Score = 29.3 bits (64), Expect = 3.0 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = -1 Query: 277 P*YPRRGTCAAQGSGHLPAQTPYASPSARPSGSRNRVHRGGTNGTD 140 P YP + AA +GH PA P + S+ P G++ G G D Sbjct: 297 PKYPLPASNAAPMAGHYPAPNP--AVSSAPKGAKKAATNGQAKGED 340
>AF056027:Os02g0743400 | Length = 595 Score = 29.3 bits (64), Expect = 3.0 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = -1 Query: 277 P*YPRRGTCAAQGSGHLPAQTPYASPSARPSGSRNRVHRGGTNGTD 140 P YP + AA +GH PA P + S+ P G++ G G D Sbjct: 297 PKYPLPASNAAPMAGHYPAPNP--AVSSAPKGAKKAATNGQAKGED 340
>AK109718:Os01g0659800 | Length = 296 Score = 28.9 bits (63), Expect = 3.9 Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Frame = +2 Query: 143 RPVGSPSVHAVPRSAWPRRWRCIRGLRRQVAASLCRTSPSPWISRATR--PTLSSANTKT 316 RPVGSPS+ AV R + GL VAASL PSP + A R P +S + T Sbjct: 126 RPVGSPSMFAVGVRRPSGR---VHGL-LNVAASLVAAPPSPAAAHALRSSPAVSLSGLST 181
>AK099091:Os07g0247000 | Length = 361 Score = 28.9 bits (63), Expect = 3.9 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -1 Query: 241 GSGHLPAQTPYASPSARPSGSRNRVHRGGTNGT 143 GS P+ +P +SPS+ PSGS + G +G+ Sbjct: 239 GSSGSPSSSPSSSPSSSPSGSPSSSPSGSPSGS 271
>AK072232:Os07g0247000 | Length = 361 Score = 28.9 bits (63), Expect = 3.9 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -1 Query: 241 GSGHLPAQTPYASPSARPSGSRNRVHRGGTNGT 143 GS P+ +P +SPS+ PSGS + G +G+ Sbjct: 239 GSSGSPSSSPSSSPSSSPSGSPSSSPSGSPSGS 271
>Os06g0280500:Os06g0280500 | Length = 1168 Score = 28.5 bits (62), Expect = 5.1 Identities = 18/38 (47%), Positives = 21/38 (55%) Frame = +2 Query: 146 PVGSPSVHAVPRSAWPRRWRCIRGLRRQVAASLCRTSP 259 P SPS+ +P PRR R RRQVA + RTSP Sbjct: 157 PRPSPSLTPLPGPLPPRR----RRRRRQVAVAAARTSP 190
>AK120751:Os01g0730900 | Length = 622 Score = 28.5 bits (62), Expect = 5.1 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 5/45 (11%) Frame = -2 Query: 204 LHLRGQ-----ADRGTACTEGEPTGRIGRRRPVGSGEGRGGENYS 85 LH RG+ A R AC +P GR+ G+G RG N S Sbjct: 225 LHHRGKSILDMAGRSLACGLSDPKSAAGRKSEAGAGASRGHLNGS 269
>Os07g0621900:Os07g0621900 | Length = 220 Score = 28.1 bits (61), Expect = 6.7 Identities = 18/47 (38%), Positives = 27/47 (57%) Frame = +2 Query: 143 RPVGSPSVHAVPRSAWPRRWRCIRGLRRQVAASLCRTSPSPWISRAT 283 RP SPS ++PR+A +R RG+RR++ LCR P S+ + Sbjct: 124 RPSSSPS-SSIPRAAARKRSHPPRGIRRRL--RLCRNRDGPPTSQCS 167
>AK069092:Os05g0276100 | Length = 790 Score = 28.1 bits (61), Expect = 6.7 Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%) Frame = +1 Query: 391 SDPTYNVSVLF-GKRDEPLLLACARQLIEH 477 SD +YN+ VLF G RD+ L+ A +++EH Sbjct: 618 SDVSYNIVVLFFGGRDDREALSYATRMVEH 647
>AK064101:Os08g0462300 | Length = 418 Score = 27.7 bits (60), Expect = 8.7 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = +2 Query: 185 AWPRRWRCIRGLRRQVAASLCRTSPSPWISRATRP 289 AW RRW +RGL +S + S + RA P Sbjct: 50 AWRRRWESVRGLDLSFRSSAPAAAISSVLKRAAAP 84 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 22,715,609 Number of extensions: 566099 Number of successful extensions: 1917 Number of sequences better than 10.0: 17 Number of HSP's gapped: 1911 Number of HSP's successfully gapped: 18 Length of query: 249 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 151 Effective length of database: 11,475,837 Effective search space: 1732851387 Effective search space used: 1732851387 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
