ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf87o20 |
|---|---|
| Clone Library Name | barley_pub |
>P51273:YCF36_PORPU Uncharacterized protein ycf36 - Porphyra purpurea| Length = 165 Score = 133 bits (335), Expect = 1e-30 Identities = 63/137 (45%), Positives = 94/137 (68%) Frame = +1 Query: 292 VPYEQRPVNEYSALKESTLYSWAELSPGSFFMRLGSLCLVTFTVLAAPISAASFSPGKDP 471 VP EQ+PVNEY++LK S + W LS S+ ++ ++ L+ L +P+ + F K P Sbjct: 10 VPLEQQPVNEYNSLKNSWFFCWPTLSSHSYNKKI-TITLIATCFLVSPVLLSIFPIAKLP 68 Query: 472 LKFVLAAGIGTLLLVSLVVLRIYLGWSYVGDRLLSAVVPYEETGWYDGQMWVKPAEVLAR 651 LKF + I + L+ +++R+YLGWSYV RL+SA V YEE+GWYDGQ+WVKP+E+L + Sbjct: 69 LKFFFSEFIISSLITCFILIRLYLGWSYVVKRLMSATVFYEESGWYDGQIWVKPSEILVK 128 Query: 652 DRLLGSYKVKPVINLLK 702 DR +G Y+V P++N +K Sbjct: 129 DRFIGLYEVFPLLNKIK 145
>Q1XDL3:YCF36_PORYE Uncharacterized protein ycf36 - Porphyra yezoensis| Length = 165 Score = 130 bits (328), Expect = 7e-30 Identities = 63/137 (45%), Positives = 95/137 (69%) Frame = +1 Query: 292 VPYEQRPVNEYSALKESTLYSWAELSPGSFFMRLGSLCLVTFTVLAAPISAASFSPGKDP 471 VP EQ+PV+EY++LK S + W LS S+ ++ ++ L+ +L +PI + F K P Sbjct: 10 VPKEQQPVHEYTSLKNSWFFCWPTLSRRSYNKKI-TIALLLNCLLVSPILLSIFPITKLP 68 Query: 472 LKFVLAAGIGTLLLVSLVVLRIYLGWSYVGDRLLSAVVPYEETGWYDGQMWVKPAEVLAR 651 LKF + I + L+ +++R+YLGWSYV RL+SA V YEE+GWYDGQ+WVKP+E+L + Sbjct: 69 LKFFFSEFITSSLMTGFILIRLYLGWSYVVKRLMSATVFYEESGWYDGQIWVKPSEILLK 128 Query: 652 DRLLGSYKVKPVINLLK 702 DR +G Y+V P++N +K Sbjct: 129 DRFIGLYEVFPLLNKIK 145
>P48276:YCF36_CYAPA Uncharacterized protein ycf36 - Cyanophora paradoxa| Length = 159 Score = 116 bits (291), Expect = 1e-25 Identities = 61/138 (44%), Positives = 88/138 (63%) Frame = +1 Query: 292 VPYEQRPVNEYSALKESTLYSWAELSPGSFFMRLGSLCLVTFTVLAAPISAASFSPGKDP 471 +P EQ+P+NEY L S L++W +F L ++ + F +L I+ + P Sbjct: 7 IPTEQQPLNEYQILNNSVLFNWPSQKLKIYFFYLFTIYSIGF-LLTFLITFYNDLFIVHP 65 Query: 472 LKFVLAAGIGTLLLVSLVVLRIYLGWSYVGDRLLSAVVPYEETGWYDGQMWVKPAEVLAR 651 + + IG ++ L +LR+YLGWSY+ RLLSA V YEE+GWYDGQ+WVK +EVL + Sbjct: 66 VNIFVHGIIGGNFVLILDLLRLYLGWSYICQRLLSATVSYEESGWYDGQIWVKSSEVLIQ 125 Query: 652 DRLLGSYKVKPVINLLKQ 705 DRL+G Y+V+PV+N LKQ Sbjct: 126 DRLIGIYQVRPVLNRLKQ 143
>O78501:YCF36_GUITH Uncharacterized protein ycf36 - Guillardia theta (Cryptomonas phi)| Length = 155 Score = 90.9 bits (224), Expect = 9e-18 Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 2/143 (1%) Frame = +1 Query: 280 MEIGVPYEQRPVNEYSALKESTLYSWAELSPGSF--FMRLGSLCLVTFTVLAAPISAASF 453 M VP Q P+NEY+ L + +SWA + F+ LCL F + + + Sbjct: 1 MNCPVPENQLPINEYNKLTSAWDFSWACKIGKLYYKFLLKMQLCLFLFFCICLNFLDSKY 60 Query: 454 SPGKDPLKFVLAAGIGTLLLVSLVVLRIYLGWSYVGDRLLSAVVPYEETGWYDGQMWVKP 633 G L + I + L + L+ LR YLG+ Y+ RLL + +PYEE+ WYDGQ+WVK Sbjct: 61 ETG-------LYSLILSTLFICLICLRTYLGFRYIYVRLLKSALPYEESSWYDGQVWVKN 113 Query: 634 AEVLARDRLLGSYKVKPVINLLK 702 L +DRL+ Y V P+++ LK Sbjct: 114 INYLIKDRLVADYTVLPILSRLK 136
>Q7S6P8:BFR2_NEUCR Protein bfr-2 - Neurospora crassa| Length = 636 Score = 32.7 bits (73), Expect = 2.8 Identities = 24/70 (34%), Positives = 34/70 (48%) Frame = +3 Query: 240 KPLRRGRPELGPQDGDRSPIRAKTG*RVLRSQGEHLVFVGRAQSRLLLHAPRQPVPGHIY 419 KP + PE P+DGD ++ V R++ EH V VG+++ L P G Y Sbjct: 20 KPAKDYDPEAEPRDGDDDQSGSEADSDVERAETEHYVTVGKSK----LRKAEAPTLGPEY 75 Query: 420 SSGGPNLSRK 449 S G +SRK Sbjct: 76 S--GTRVSRK 83
>A0T0N6:RBL_THAPS Ribulose bisphosphate carboxylase large chain - Thalassiosira| pseudonana (Marine diatom) Length = 490 Score = 32.7 bits (73), Expect = 2.8 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +1 Query: 562 DRLLSAVVPYEETGWYDGQMWVKPAEVLARDRLLGSYKVKPV 687 DR S V+PY + G++D VK +VLA R+ V PV Sbjct: 14 DRYESGVIPYAKMGYWDAAYTVKDTDVLALFRITPQPGVDPV 55
>O98947:RBL_THANO Ribulose bisphosphate carboxylase large chain - Thalassiosira| nordenskioeldii (Marine diatom) Length = 490 Score = 32.7 bits (73), Expect = 2.8 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +1 Query: 562 DRLLSAVVPYEETGWYDGQMWVKPAEVLARDRLLGSYKVKPV 687 DR S V+PY + G++D VK +VLA R+ V PV Sbjct: 14 DRYESGVIPYAKMGYWDAAYTVKDTDVLALFRITPQPGVDPV 55
>P24673:RBL_CYLSN Ribulose bisphosphate carboxylase large chain - Cylindrotheca sp.| (strain N1) (Marine diatom) Length = 490 Score = 32.7 bits (73), Expect = 2.8 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +1 Query: 562 DRLLSAVVPYEETGWYDGQMWVKPAEVLARDRLLGSYKVKPV 687 DR S V+PY + G++D VK +VLA R+ V PV Sbjct: 14 DRYESGVIPYAKMGYWDASYAVKTTDVLALFRITPQPGVDPV 55
>Q01266:YHYC_PSESN Uncharacterized protein in hyuC 3'region - Pseudomonas sp. (strain| NS671) Length = 245 Score = 32.3 bits (72), Expect = 3.6 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 14/82 (17%) Frame = +1 Query: 424 LAAPISAASFSPGKDPLKFVLAAGIGTLLLVSLVVL------------RIYL--GWSYVG 561 L PI+AA P PL+ ++A +G L++ L+ L +Y+ + Y+G Sbjct: 26 LVTPITAAQLYPALSPLQIIIACILGNLIVAILLTLLGDIGVRYGIPYAVYIRASFGYLG 85 Query: 562 DRLLSAVVPYEETGWYDGQMWV 627 + V W+ Q W+ Sbjct: 86 AHIPGIVRAVPAVFWFGFQTWM 107
>P06632:DKGA_CORSC 2,5-diketo-D-gluconic acid reductase A - Corynebacterium sp.| (strain ATCC 31090) Length = 278 Score = 32.3 bits (72), Expect = 3.6 Identities = 18/70 (25%), Positives = 35/70 (50%) Frame = +1 Query: 277 RMEIGVPYEQRPVNEYSALKESTLYSWAELSPGSFFMRLGSLCLVTFTVLAAPISAASFS 456 ++E+ Y+QR + +++A + + SW L G + + A P++AA+ + Sbjct: 161 QIELHPAYQQREITDWAAAHDVKIESWGPLGQGKYDL-----------FGAEPVTAAAAA 209 Query: 457 PGKDPLKFVL 486 GK P + VL Sbjct: 210 HGKTPAQAVL 219
>Q5P4A1:LEXA_AZOSE LexA repressor - Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum| (strain EbN1)) Length = 203 Score = 32.0 bits (71), Expect = 4.7 Identities = 22/62 (35%), Positives = 35/62 (56%) Frame = +3 Query: 258 RPELGPQDGDRSPIRAKTG*RVLRSQGEHLVFVGRAQSRLLLHAPRQPVPGHIYSSGGPN 437 R E+ G RSP A+T R L ++G ++ GRA+ L+ A P+ GH+ ++G P Sbjct: 32 RAEICTAFGFRSPNAAETHLRTLAAKGAIVLEEGRARGIRLVEALGLPLVGHV-AAGRPM 90 Query: 438 LS 443 L+ Sbjct: 91 LA 92
>Q9TK52:RBL_PHATR Ribulose bisphosphate carboxylase large chain - Phaeodactylum| tricornutum Length = 490 Score = 32.0 bits (71), Expect = 4.7 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +1 Query: 562 DRLLSAVVPYEETGWYDGQMWVKPAEVLARDRLLGSYKVKPV 687 DR S V+PY + G++D VK +VLA R+ V PV Sbjct: 14 DRYESGVIPYAKMGYWDAAYAVKNTDVLALFRITPQPGVDPV 55
>P49520:RBL_ODOSI Ribulose bisphosphate carboxylase large chain - Odontella sinensis| (Marine centric diatom) Length = 490 Score = 31.6 bits (70), Expect = 6.2 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +1 Query: 562 DRLLSAVVPYEETGWYDGQMWVKPAEVLARDRLLGSYKVKPV 687 DR S V+PY + G++D V+ +VLA R+ V PV Sbjct: 14 DRYESGVIPYAKMGYWDASYTVQDTDVLALFRITPQPGVDPV 55
>P14957:RBL_GUITH Ribulose bisphosphate carboxylase large chain - Guillardia theta| (Cryptomonas phi) Length = 488 Score = 31.6 bits (70), Expect = 6.2 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +1 Query: 562 DRLLSAVVPYEETGWYDGQMWVKPAEVLARDRLLGSYKVKPV 687 +R S V+PY + G++D +K +VLA R+ V PV Sbjct: 14 ERYESGVIPYAKMGYWDADYVIKDTDVLAMFRMTPQKGVDPV 55 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 179,130,710 Number of extensions: 3898358 Number of successful extensions: 11609 Number of sequences better than 10.0: 14 Number of HSP's gapped: 11603 Number of HSP's successfully gapped: 14 Length of query: 372 Length of database: 100,686,439 Length adjustment: 115 Effective length of query: 257 Effective length of database: 69,142,514 Effective search space: 17769626098 Effective search space used: 17769626098 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
