Clone Information

BLAST Search Result

Clone Name	FLbaf85e10
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	P33278:SUI1_ORYSA Protein translation factor SUI1 homolog - Oryz...	209	9e-54
2	Q9SM41:SUI1_SPOST Protein translation factor SUI1 homolog - Spor...	208	2e-53
3	P56330:SUI1_MAIZE Protein translation factor SUI1 homolog - Zea ...	207	4e-53
4	O48650:SUI1_SALBA Protein translation factor SUI1 homolog - Sali...	200	4e-51
5	Q94JV4:SUI12_ARATH Protein translation factor SUI1 homolog 2 - A...	196	6e-50
6	P41568:SUI11_ARATH Protein translation factor SUI1 homolog 1 - A...	194	4e-49
7	Q9SQF4:SUI1_BRAOL Protein translation factor SUI1 homolog - Bras...	192	2e-48
8	O82569:SUI1_PIMBR Protein translation factor SUI1 homolog - Pimp...	169	1e-41
9	Q5RFF4:EIF1_PONPY Eukaryotic translation initiation factor 1 - P...	135	1e-31
10	P41567:EIF1_HUMAN Eukaryotic translation initiation factor 1 - H...	135	1e-31
11	Q5E938:EIF1_BOVIN Eukaryotic translation initiation factor 1 - B...	135	1e-31
12	P61220:EIF1B_PIG Eukaryotic translation initiation factor 1b - S...	135	1e-31
13	Q9CXU9:EIF1B_MOUSE Eukaryotic translation initiation factor 1b -...	135	1e-31
14	Q4R4X9:EIF1B_MACFA Eukaryotic translation initiation factor 1b -...	135	1e-31
15	O60739:EIF1B_HUMAN Eukaryotic translation initiation factor 1b -...	135	1e-31
16	P48024:EIF1_MOUSE Eukaryotic translation initiation factor 1 - M...	135	2e-31
17	P42678:SUI1_ANOGA Protein translation factor SUI1 homolog - Anop...	122	1e-27
18	P32911:SUI1_YEAST Eukaryotic translation initiation factor eIF-1...	120	6e-27
19	Q9VZS3:SUI1_DROME Protein translation factor SUI1 homolog - Dros...	119	1e-26
20	Q755R1:SUI1_ASHGO Protein translation factor SUI1 - Ashbya gossy...	116	1e-25
21	P79060:SUI1_SCHPO Protein translation factor sui1 - Schizosaccha...	115	2e-25
22	P51971:EIF1_CHICK Eukaryotic translation initiation factor 1 - G...	109	1e-23
23	Q5UQD7:SUI1_MIMIV Protein translation factor SUI1 homolog - Mimi...	59	3e-08
24	Q97BW9:SUI1_THEVO Protein translation factor SUI1 homolog - Ther...	44	9e-04
25	Q8U006:SUI1_PYRFU Protein translation factor SUI1 homolog - Pyro...	42	0.002
26	Q5UZP9:SUI1_HALMA Protein translation factor SUI1 homolog - Halo...	41	0.004
27	Q9HME3:SUI1_HALSA Protein translation factor SUI1 homolog - Halo...	41	0.006
28	Q5JDH7:SUI1_PYRKO Protein translation factor SUI1 homolog - Pyro...	40	0.008
29	Q55397:Y546_SYNY3 Uncharacterized protein sll0546 - Synechocysti...	40	0.010
30	P58193:SUI1_PYRHO Protein translation factor SUI1 homolog - Pyro...	40	0.010
31	Q9V1U3:SUI1_PYRAB Protein translation factor SUI1 homolog - Pyro...	40	0.013
32	Q6L1B9:SUI1_PICTO Protein translation factor SUI1 homolog - Picr...	39	0.017
33	Q8PYK3:SUI1_METMA Protein translation factor SUI1 homolog - Meth...	37	0.064
34	Q8TIT3:SUI1_METAC Protein translation factor SUI1 homolog - Meth...	37	0.064
35	Q8TX33:SUI1_METKA Protein translation factor SUI1 homolog - Meth...	33	0.92
36	Q8AYC1:MRTFB_XENLA Myocardin-related transcription factor B - Xe...	33	1.6
37	P0A2G7:YCIH_SALTY Uncharacterized protein yciH - Salmonella typh...	32	2.7
38	P0A2G8:YCIH_SALTI Uncharacterized protein yciH - Salmonella typhi	32	2.7
39	O42929:DENR_SCHPO Density-regulated protein homolog - Schizosacc...	32	2.7
40	P32870:CYA1_DROME Ca(2+)/calmodulin-responsive adenylate cyclase...	31	5.9

>P33278:SUI1_ORYSA Protein translation factor SUI1 homolog - Oryza sativa (Rice)|
          Length = 115
 Score =  209 bits (532), Expect = 9e-54
 Identities = 101/115 (87%), Positives = 108/115 (93%)
 Frame = +1

Query: 169 MSDLDVTLPSAFDPFAEANAEDAGAGPGAKDYVHVRVQQRNGRKSLTTVQGLKKEFSYNK 348
           MSDLD+ +P+AFDPFAEANA D+GA  G+KDYVHVR+QQRNGRKSLTTVQGLKKEFSYNK
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 349 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 513
           ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNV+ FLVQAGI KKE IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

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>Q9SM41:SUI1_SPOST Protein translation factor SUI1 homolog - Sporobolus stapfianus|
           (Ressurection grass)
          Length = 115

 Score =  208 bits (529), Expect = 2e-53
 Identities = 100/115 (86%), Positives = 108/115 (93%)
 Frame = +1

Query: 169 MSDLDVTLPSAFDPFAEANAEDAGAGPGAKDYVHVRVQQRNGRKSLTTVQGLKKEFSYNK 348
           MSDLD+ +P+AFDPF+EANA D+GA  G+KDYVHVR+QQRNGRKSLTTVQGLKKEFSYNK
Sbjct: 1   MSDLDIQIPTAFDPFSEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 349 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 513
           ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNV+ FLVQAGI KKE IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

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>P56330:SUI1_MAIZE Protein translation factor SUI1 homolog - Zea mays (Maize)|
          Length = 115

 Score =  207 bits (527), Expect = 4e-53
 Identities = 100/115 (86%), Positives = 108/115 (93%)
 Frame = +1

Query: 169 MSDLDVTLPSAFDPFAEANAEDAGAGPGAKDYVHVRVQQRNGRKSLTTVQGLKKEFSYNK 348
           MSDLD+ +P+AFDPFAEANA D+GA  G+KDYVHVR+QQRNGRKSLTTVQGLKKEFSY+K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 60

Query: 349 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 513
           ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNV+ FLVQAGI KKE IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

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>O48650:SUI1_SALBA Protein translation factor SUI1 homolog - Salix bakko (Japanese|
           willow)
          Length = 113

 Score =  200 bits (509), Expect = 4e-51
 Identities = 99/115 (86%), Positives = 107/115 (93%)
 Frame = +1

Query: 169 MSDLDVTLPSAFDPFAEANAEDAGAGPGAKDYVHVRVQQRNGRKSLTTVQGLKKEFSYNK 348
           MS+ D  +P+AFDPFAEANAED+GAG   KDYVHVRVQQRNGRKSLTTVQGLKK++SYNK
Sbjct: 1   MSEFDNAIPTAFDPFAEANAEDSGAG--TKDYVHVRVQQRNGRKSLTTVQGLKKDYSYNK 58

Query: 349 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 513
           ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNV++FLVQAGI KKE IKIHGF
Sbjct: 59  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSSFLVQAGIVKKENIKIHGF 113

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>Q94JV4:SUI12_ARATH Protein translation factor SUI1 homolog 2 - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 113

 Score =  196 bits (499), Expect = 6e-50
 Identities = 96/115 (83%), Positives = 108/115 (93%)
 Frame = +1

Query: 169 MSDLDVTLPSAFDPFAEANAEDAGAGPGAKDYVHVRVQQRNGRKSLTTVQGLKKEFSYNK 348
           MSDL+V +P+AFDPFA+ANAED+GAG   K+YVH+RVQQRNGRKSLTTVQGLKKE+SY+K
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAG--TKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSK 58

Query: 349 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 513
           ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNV+TFLVQAG+ KK+ IKIHGF
Sbjct: 59  ILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

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>P41568:SUI11_ARATH Protein translation factor SUI1 homolog 1 - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 113

 Score =  194 bits (492), Expect = 4e-49
 Identities = 95/115 (82%), Positives = 106/115 (92%)
 Frame = +1

Query: 169 MSDLDVTLPSAFDPFAEANAEDAGAGPGAKDYVHVRVQQRNGRKSLTTVQGLKKEFSYNK 348
           MS+LD  +P+AFDPFA+ANAED+GAG   K+YVH+RVQQRNGRKSLTTVQGLKKE+SY K
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAG--TKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTK 58

Query: 349 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 513
           ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNV+TFLVQAG+ KK+ IKIHGF
Sbjct: 59  ILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

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>Q9SQF4:SUI1_BRAOL Protein translation factor SUI1 homolog - Brassica oleracea (Wild|
           cabbage)
          Length = 113

 Score =  192 bits (487), Expect = 2e-48
 Identities = 94/115 (81%), Positives = 106/115 (92%)
 Frame = +1

Query: 169 MSDLDVTLPSAFDPFAEANAEDAGAGPGAKDYVHVRVQQRNGRKSLTTVQGLKKEFSYNK 348
           MS+LD  +P+AFDPFA+ANAED+GAG   K+YVH+RVQQRNGRKSLTTVQGLKKE+SY K
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAG--TKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTK 58

Query: 349 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 513
           ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNV+TFLVQAG+ KK+ I+IHGF
Sbjct: 59  ILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113

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>O82569:SUI1_PIMBR Protein translation factor SUI1 homolog - Pimpinella brachycarpa|
          Length = 113

 Score =  169 bits (428), Expect = 1e-41
 Identities = 82/115 (71%), Positives = 95/115 (82%)
 Frame = +1

Query: 169 MSDLDVTLPSAFDPFAEANAEDAGAGPGAKDYVHVRVQQRNGRKSLTTVQGLKKEFSYNK 348
           M D D+ +P++FDPFAEA   DA      K+YVH+R+QQRNGRKSLTTVQGLKKE SY+K
Sbjct: 1   MVDSDIQIPTSFDPFAEAEITDATGS--TKEYVHIRIQQRNGRKSLTTVQGLKKELSYDK 58

Query: 349 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 513
           ILKDLKK  CCNGTVV D ELG+VIQLQGDQRKNV+TF+VQAGI KK+ IK+H F
Sbjct: 59  ILKDLKKALCCNGTVVNDKELGKVIQLQGDQRKNVSTFIVQAGIVKKDQIKVHNF 113

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>Q5RFF4:EIF1_PONPY Eukaryotic translation initiation factor 1 - Pongo pygmaeus|
           (Orangutan)
          Length = 113

 Score =  135 bits (341), Expect = 1e-31
 Identities = 59/105 (56%), Positives = 82/105 (78%)
 Frame = +1

Query: 199 AFDPFAEANAEDAGAGPGAKDYVHVRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 378
           +FDPFA+A+  D     G +DY+H+R+QQRNGRK+LTTVQG+  ++   K++K  KK+F 
Sbjct: 9   SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68

Query: 379 CNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 513
           CNGTV++ PE G+VIQLQGDQRKN+  FLV+ G+AK + +K+HGF
Sbjct: 69  CNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113

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>P41567:EIF1_HUMAN Eukaryotic translation initiation factor 1 - Homo sapiens (Human)|
          Length = 113

 Score =  135 bits (341), Expect = 1e-31
 Identities = 59/105 (56%), Positives = 82/105 (78%)
 Frame = +1

Query: 199 AFDPFAEANAEDAGAGPGAKDYVHVRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 378
           +FDPFA+A+  D     G +DY+H+R+QQRNGRK+LTTVQG+  ++   K++K  KK+F 
Sbjct: 9   SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68

Query: 379 CNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 513
           CNGTV++ PE G+VIQLQGDQRKN+  FLV+ G+AK + +K+HGF
Sbjct: 69  CNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113

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>Q5E938:EIF1_BOVIN Eukaryotic translation initiation factor 1 - Bos taurus (Bovine)|
          Length = 113

 Score =  135 bits (341), Expect = 1e-31
 Identities = 59/105 (56%), Positives = 82/105 (78%)
 Frame = +1

Query: 199 AFDPFAEANAEDAGAGPGAKDYVHVRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 378
           +FDPFA+A+  D     G +DY+H+R+QQRNGRK+LTTVQG+  ++   K++K  KK+F 
Sbjct: 9   SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68

Query: 379 CNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 513
           CNGTV++ PE G+VIQLQGDQRKN+  FLV+ G+AK + +K+HGF
Sbjct: 69  CNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113

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>P61220:EIF1B_PIG Eukaryotic translation initiation factor 1b - Sus scrofa (Pig)|
          Length = 113

 Score =  135 bits (341), Expect = 1e-31
 Identities = 59/105 (56%), Positives = 81/105 (77%)
 Frame = +1

Query: 199 AFDPFAEANAEDAGAGPGAKDYVHVRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 378
           +FDPFA+A   D     G +DY+H+R+QQRNGRK+LTTVQG+  ++   K++K  KK+F 
Sbjct: 9   SFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68

Query: 379 CNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 513
           CNGTV++ PE G+VIQLQGDQRKN+  FL++ GI K+E +K+HGF
Sbjct: 69  CNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113

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>Q9CXU9:EIF1B_MOUSE Eukaryotic translation initiation factor 1b - Mus musculus (Mouse)|
          Length = 113

 Score =  135 bits (341), Expect = 1e-31
 Identities = 59/105 (56%), Positives = 81/105 (77%)
 Frame = +1

Query: 199 AFDPFAEANAEDAGAGPGAKDYVHVRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 378
           +FDPFA+A   D     G +DY+H+R+QQRNGRK+LTTVQG+  ++   K++K  KK+F 
Sbjct: 9   SFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68

Query: 379 CNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 513
           CNGTV++ PE G+VIQLQGDQRKN+  FL++ GI K+E +K+HGF
Sbjct: 69  CNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113

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>Q4R4X9:EIF1B_MACFA Eukaryotic translation initiation factor 1b - Macaca fascicularis|
           (Crab eating macaque) (Cynomolgus monkey)
          Length = 113

 Score =  135 bits (341), Expect = 1e-31
 Identities = 59/105 (56%), Positives = 81/105 (77%)
 Frame = +1

Query: 199 AFDPFAEANAEDAGAGPGAKDYVHVRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 378
           +FDPFA+A   D     G +DY+H+R+QQRNGRK+LTTVQG+  ++   K++K  KK+F 
Sbjct: 9   SFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68

Query: 379 CNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 513
           CNGTV++ PE G+VIQLQGDQRKN+  FL++ GI K+E +K+HGF
Sbjct: 69  CNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113

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>O60739:EIF1B_HUMAN Eukaryotic translation initiation factor 1b - Homo sapiens (Human)|
          Length = 113

 Score =  135 bits (341), Expect = 1e-31
 Identities = 59/105 (56%), Positives = 81/105 (77%)
 Frame = +1

Query: 199 AFDPFAEANAEDAGAGPGAKDYVHVRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 378
           +FDPFA+A   D     G +DY+H+R+QQRNGRK+LTTVQG+  ++   K++K  KK+F 
Sbjct: 9   SFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68

Query: 379 CNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 513
           CNGTV++ PE G+VIQLQGDQRKN+  FL++ GI K+E +K+HGF
Sbjct: 69  CNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113

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>P48024:EIF1_MOUSE Eukaryotic translation initiation factor 1 - Mus musculus (Mouse)|
          Length = 113

 Score =  135 bits (340), Expect = 2e-31
 Identities = 58/105 (55%), Positives = 82/105 (78%)
 Frame = +1

Query: 199 AFDPFAEANAEDAGAGPGAKDYVHVRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 378
           +FDPFA+A+  D     G +DY+H+R+QQRNGRK+LTTVQG+  ++   K++K  KK+F 
Sbjct: 9   SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68

Query: 379 CNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 513
           CNGTV++ PE G+VIQLQGDQRKN+  FL++ G+AK + +K+HGF
Sbjct: 69  CNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIGLAKDDQLKVHGF 113

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>P42678:SUI1_ANOGA Protein translation factor SUI1 homolog - Anopheles gambiae|
           (African malaria mosquito)
          Length = 110

 Score =  122 bits (307), Expect = 1e-27
 Identities = 59/107 (55%), Positives = 80/107 (74%), Gaps = 1/107 (0%)
 Frame = +1

Query: 196 SAFDPFAEANAEDAGAGPGAKD-YVHVRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKE 372
           + FDPFA+A     GA    +D  VH+R+QQRNGRK+LTTVQGL  E+   KI++  KKE
Sbjct: 7   NTFDPFADAIK---GADYDVQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRACKKE 63

Query: 373 FCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 513
           F CNGTV++ PE G+V+QLQGDQR+N+  +L ++G+AK E +K+HGF
Sbjct: 64  FACNGTVIEHPEYGEVLQLQGDQRENICQWLTKSGLAKPEQLKVHGF 110

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>P32911:SUI1_YEAST Eukaryotic translation initiation factor eIF-1 - Saccharomyces|
           cerevisiae (Baker's yeast)
          Length = 108

 Score =  120 bits (301), Expect = 6e-27
 Identities = 57/106 (53%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
 Frame = +1

Query: 199 AFDPFAEANAEDAGAGPGAKDYVHVRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 378
           +FDPFA+   ++        +Y+H+R+QQRNGRK+LTTVQG+ +E+   +ILK LKK+F 
Sbjct: 8   SFDPFADTGDDETATS----NYIHIRIQQRNGRKTLTTVQGVPEEYDLKRILKVLKKDFA 63

Query: 379 CNGTVVQDPELGQVIQLQGDQRKNVATFLV-QAGIAKKELIKIHGF 513
           CNG +V+DPE+G++IQLQGDQR  V  F++ Q G+ KK  IKIHGF
Sbjct: 64  CNGNIVKDPEMGEIIQLQGDQRAKVCEFMISQLGLQKKN-IKIHGF 108

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>Q9VZS3:SUI1_DROME Protein translation factor SUI1 homolog - Drosophila melanogaster|
           (Fruit fly)
          Length = 110

 Score =  119 bits (299), Expect = 1e-26
 Identities = 57/106 (53%), Positives = 77/106 (72%), Gaps = 3/106 (2%)
 Frame = +1

Query: 205 DPFAEA---NAEDAGAGPGAKDYVHVRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEF 375
           DPFA+A   N +D   G      VH+R+QQRNGRK+LTTVQGL  E+   KI++  KKEF
Sbjct: 10  DPFADAIKGNDDDIQDG-----LVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRSCKKEF 64

Query: 376 CCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 513
            CNGTV++ PE G+V+QLQGDQR+N+  +L + G+AK + +K+HGF
Sbjct: 65  ACNGTVIEHPEYGEVLQLQGDQRENICQWLTKVGLAKPDQLKVHGF 110

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>Q755R1:SUI1_ASHGO Protein translation factor SUI1 - Ashbya gossypii (Yeast)|
           (Eremothecium gossypii)
          Length = 108

 Score =  116 bits (290), Expect = 1e-25
 Identities = 54/105 (51%), Positives = 77/105 (73%)
 Frame = +1

Query: 199 AFDPFAEANAEDAGAGPGAKDYVHVRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 378
           +FDPFA+   ++A +     +Y+H+R+QQRNGRK+LTTVQG+ +E+   +ILK L+K+F 
Sbjct: 8   SFDPFADTGDDEASSS----NYIHIRIQQRNGRKTLTTVQGIPEEYDLKRILKVLRKDFG 63

Query: 379 CNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 513
           CNG +V+D E+G++IQLQGDQR  V  FL+      K+ IKIHGF
Sbjct: 64  CNGNMVKDDEMGEIIQLQGDQRAKVCEFLITQLAIPKKNIKIHGF 108

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>P79060:SUI1_SCHPO Protein translation factor sui1 - Schizosaccharomyces pombe|
           (Fission yeast)
          Length = 109

 Score =  115 bits (288), Expect = 2e-25
 Identities = 58/103 (56%), Positives = 75/103 (72%)
 Frame = +1

Query: 205 DPFAEANAEDAGAGPGAKDYVHVRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN 384
           DPFA+   +DA       + +H+R+QQRNGRK+LTTVQGL +EF   +IL+ LKK+F CN
Sbjct: 11  DPFADTGDDDAQP----LNNIHIRIQQRNGRKTLTTVQGLPREFDQKRILRALKKDFACN 66

Query: 385 GTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 513
           GT+V+D +LG+VIQLQGDQR  V  FL Q    +K+ IKIHGF
Sbjct: 67  GTIVKDDDLGEVIQLQGDQRIKVMEFLTQQLGLQKKNIKIHGF 109

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>P51971:EIF1_CHICK Eukaryotic translation initiation factor 1 - Gallus gallus|
           (Chicken)
          Length = 79

 Score =  109 bits (272), Expect = 1e-23
 Identities = 47/79 (59%), Positives = 64/79 (81%)
 Frame = +1

Query: 277 VQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVA 456
           +QQRNGRK+LTTVQG+  ++   K++K  KK+F CNGTV++ PE G+VIQLQGDQRKN+ 
Sbjct: 1   IQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNIC 60

Query: 457 TFLVQAGIAKKELIKIHGF 513
            FLV+ G+AK + +K+HGF
Sbjct: 61  QFLVEIGLAKDDQLKVHGF 79

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>Q5UQD7:SUI1_MIMIV Protein translation factor SUI1 homolog - Mimivirus|
          Length = 106

 Score = 58.5 bits (140), Expect = 3e-08
 Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
 Frame = +1

Query: 265 VHVRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQD-PELGQVIQLQGDQ 441
           +H++ +QR   KS+T ++ + ++      LK LK  F C+G++ Q+  +  + IQL GD 
Sbjct: 23  IHIKTKQRTKTKSITIIENIPEKIDLKLFLKKLKYTFHCSGSIQQNYDDDSKFIQLSGDH 82

Query: 442 RKNVATFLVQAGIAKKELIKIHGF 513
           R+ V  FL++  I K+  I +HG+
Sbjct: 83  RELVKNFLIKNSIVKESNIVMHGY 106

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>Q97BW9:SUI1_THEVO Protein translation factor SUI1 homolog - Thermoplasma volcanium|
          Length = 100

 Score = 43.5 bits (101), Expect = 9e-04
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
 Frame = +1

Query: 265 VHVRVQQRNGRKSLTTVQGLKKEFS-YNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 441
           V + V +R   K +T ++G+  +     KI K+LKK+    GTV +    G++I+LQGD 
Sbjct: 26  VKIVVDKRRYGKFVTIIEGIDPKIEDIEKIAKELKKKVASGGTVKE----GRIIELQGDH 81

Query: 442 RKNVATFLVQAG 477
           R+ V  FL   G
Sbjct: 82  RQEVKKFLEDMG 93

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>Q8U006:SUI1_PYRFU Protein translation factor SUI1 homolog - Pyrococcus furiosus|
          Length = 98

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
 Frame = +1

Query: 256 KDYVHVRVQQRNGR--KSLTTVQGL-KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQ 426
           K+   +RV     R  K  T ++G+ +KEF   +I K LK +  C GT          I+
Sbjct: 18  KEQQRIRVYTERARYGKIKTIIEGIDEKEFDLEEIAKKLKAKLACGGTAKNGR-----IE 72

Query: 427 LQGDQRKNVATFLVQAGIAKKELIKI 504
           LQGD R  +   LV+ G + +ELI++
Sbjct: 73  LQGDHRDRIKKLLVELGFS-EELIEV 97

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>Q5UZP9:SUI1_HALMA Protein translation factor SUI1 homolog - Haloarcula marismortui|
           (Halobacterium marismortui)
          Length = 97

 Score = 41.2 bits (95), Expect = 0.004
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
 Frame = +1

Query: 265 VHVRVQQRNGRKSLTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 441
           +++R+ +R   K +T ++G   K+   + +  DLK +F C GTV    E GQ I+LQG+ 
Sbjct: 27  INIRIDERRYGKEVTIIEGFDPKDVDMDSLSSDLKSKFACGGTV----EDGQ-IELQGNH 81

Query: 442 RKNVATFLVQAG 477
              V  FL   G
Sbjct: 82  TGRVEDFLRDKG 93

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>Q9HME3:SUI1_HALSA Protein translation factor SUI1 homolog - Halobacterium salinarium|
           (Halobacterium halobium)
          Length = 97

 Score = 40.8 bits (94), Expect = 0.006
 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = +1

Query: 265 VHVRVQQRNGRKSLTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 441
           + +R+ +R   K +T ++G   K+   + +  DLK +F C GT V+D E    I+LQG+ 
Sbjct: 27  IEIRIDERRYGKEVTVIEGFDPKDVDLDSLSSDLKSKFACGGT-VEDGE----IELQGNH 81

Query: 442 RKNVATFLVQAG 477
              V  FL   G
Sbjct: 82  SGRVEDFLRNKG 93

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>Q5JDH7:SUI1_PYRKO Protein translation factor SUI1 homolog - Pyrococcus kodakaraensis|
           (Thermococcus kodakaraensis)
          Length = 98

 Score = 40.4 bits (93), Expect = 0.008
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
 Frame = +1

Query: 265 VHVRVQQRNGRKSLTTVQGL-KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 441
           + V V++    K  T ++G+ +KEF    I K LK +  C GT          I+LQGD 
Sbjct: 23  IRVYVERARYGKLKTIIEGIDEKEFDLEDIAKKLKAKLACGGTAKNGR-----IELQGDH 77

Query: 442 RKNVATFLVQAGIAKKELIKI 504
           R  V   L + G + +ELI++
Sbjct: 78  RDRVKKLLAELGFS-EELIEV 97

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>Q55397:Y546_SYNY3 Uncharacterized protein sll0546 - Synechocystis sp. (strain PCC|
           6803)
          Length = 111

 Score = 40.0 bits (92), Expect = 0.010
 Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
 Frame = +1

Query: 202 FDPFAEANAEDAGAGPGAKDYVHVRVQQRNGRK--SLTTVQGLKKEFSYNKILKDLKKEF 375
           F P A+  +E+    P  +  V ++   R+GRK  ++T V GL+      + L    K F
Sbjct: 15  FGPVADPLSEEQIDLPPQQQNVRIQAT-RSGRKGKTVTVVSGLQLSAMGQQALLKALKSF 73

Query: 376 CCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKK 489
           C +G  +++      +++QGDQR+ +  +L++ G   K
Sbjct: 74  CGSGGTLKE----DCVEIQGDQREKILAYLLKQGYKAK 107

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>P58193:SUI1_PYRHO Protein translation factor SUI1 homolog - Pyrococcus horikoshii|
          Length = 99

 Score = 40.0 bits (92), Expect = 0.010
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = +1

Query: 265 VHVRVQQRNGRKSLTTVQGL-KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 441
           + V +++    K  T ++G+ +KEF   +I K LK +  C GT          I+LQGD 
Sbjct: 24  IKVYIERARYGKVKTIIEGIDEKEFDLEEIAKKLKAKLACGGTAKNGR-----IELQGDH 78

Query: 442 RKNVATFLVQAGIAKKELIKI 504
           R  +   L + G + +ELI++
Sbjct: 79  RDRIKKLLAELGFS-EELIEV 98

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>Q9V1U3:SUI1_PYRAB Protein translation factor SUI1 homolog - Pyrococcus abyssi|
          Length = 99

 Score = 39.7 bits (91), Expect = 0.013
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
 Frame = +1

Query: 256 KDYVHVRVQQRNGR--KSLTTVQGL-KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQ 426
           K+   +RV     R  K  T ++G+ +KEF   +I K LK +  C GT          I+
Sbjct: 19  KEQQRIRVYTERARYGKIKTIIEGIDEKEFDLEEIAKKLKAKLACGGTAKNGR-----IE 73

Query: 427 LQGDQRKNVATFLVQAGIAKKELIKI 504
           LQGD R  +   L + G + ++LI++
Sbjct: 74  LQGDHRDRIKKLLAELGFS-EDLIEV 98

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>Q6L1B9:SUI1_PICTO Protein translation factor SUI1 homolog - Picrophilus torridus|
          Length = 99

 Score = 39.3 bits (90), Expect = 0.017
 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = +1

Query: 259 DYVHVRVQQRNGRKSLTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQG 435
           + V + V +R   K +T ++G+  K    N+I K LKK+    GTV      G++I+LQG
Sbjct: 24  EVVKISVDKRRYGKVVTLIEGIDPKVEDINEIAKSLKKKVASGGTVKD----GKIIELQG 79

Query: 436 DQRKNVATFLVQAG 477
           D R+     L   G
Sbjct: 80  DHRETARAQLESMG 93

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>Q8PYK3:SUI1_METMA Protein translation factor SUI1 homolog - Methanosarcina mazei|
           (Methanosarcina frisia)
          Length = 102

 Score = 37.4 bits (85), Expect = 0.064
 Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
 Frame = +1

Query: 265 VHVRVQQRNGRKSLTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 441
           + V+V +R   K +T V+G    E   +++   LK +F C GTV      G  ++LQG+ 
Sbjct: 28  ITVKVNRRRYGKEVTVVEGFDASEIDLHELSTYLKSKFACGGTV-----KGNTVELQGNH 82

Query: 442 RKNVATFLVQAGIAKKEL 495
              +   L++ G + +++
Sbjct: 83  LTRMKEVLMEKGFSAEQI 100

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>Q8TIT3:SUI1_METAC Protein translation factor SUI1 homolog - Methanosarcina|
           acetivorans
          Length = 102

 Score = 37.4 bits (85), Expect = 0.064
 Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
 Frame = +1

Query: 265 VHVRVQQRNGRKSLTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 441
           + V+V +R   K +T V+G    E   +++   LK +F C GTV      G  ++LQG+ 
Sbjct: 28  ITVKVNRRRYGKEVTVVEGFDASEIDLHELSTYLKSKFACGGTV-----KGNTVELQGNH 82

Query: 442 RKNVATFLVQAGIAKKEL 495
              +   L++ G + +++
Sbjct: 83  LARMKEVLMEKGFSAEQI 100

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>Q8TX33:SUI1_METKA Protein translation factor SUI1 homolog - Methanopyrus kandleri|
          Length = 106

 Score = 33.5 bits (75), Expect = 0.92
 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = +1

Query: 265 VHVRVQQRNGRKSLTTVQGLKKE-FSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 441
           + +  +Q    K +T ++GL        ++   LK+E  C GT  +    G++I LQGD 
Sbjct: 30  IKIYTEQVRPGKVVTIIEGLDDAGIDLQELASKLKRECACGGTAKE----GKII-LQGDH 84

Query: 442 RKNVATFLVQAGIAKKELIKI 504
           R  V  FL++     ++ I++
Sbjct: 85  RNKVREFLIKKEGFSEDAIEV 105

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>Q8AYC1:MRTFB_XENLA Myocardin-related transcription factor B - Xenopus laevis (African|
           clawed frog)
          Length = 1067

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
 Frame = +1

Query: 154 QQPSFMSDLDVTLPSAFDPFAEANAEDAGAGPGAKDYVHVRVQQRNGRKSLT---TVQGL 324
           Q P   S  D+      DP  E    D G+    K+ + +R+QQR  R+ L     +  L
Sbjct: 11  QPPQHYSFADILSAGDLDPLKEKEWLDPGSQKSLKEVLQLRLQQRRTREQLVDQGIMPPL 70

Query: 325 KKEFSYNKILKDLKK 369
           K   ++++ +K L++
Sbjct: 71  KSPAAFHEQIKSLER 85

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>P0A2G7:YCIH_SALTY Uncharacterized protein yciH - Salmonella typhimurium|
          Length = 108

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
 Frame = +1

Query: 271 VRVQ-QRNGRKS--LTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGD 438
           VR+Q Q +GRK   +  + G++  +    K+  +LKK+  C G V +      +I++QGD
Sbjct: 33  VRIQRQTSGRKGKGVCLITGIEMNDAELTKLAAELKKKCGCGGAVKEG-----IIEIQGD 87

Query: 439 QRKNVATFLVQAGIAKK 489
           +R  + + L   G+  K
Sbjct: 88  KRDLIKSLLEAKGMKVK 104

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>P0A2G8:YCIH_SALTI Uncharacterized protein yciH - Salmonella typhi|
          Length = 108

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
 Frame = +1

Query: 271 VRVQ-QRNGRKS--LTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGD 438
           VR+Q Q +GRK   +  + G++  +    K+  +LKK+  C G V +      +I++QGD
Sbjct: 33  VRIQRQTSGRKGKGVCLITGIEMNDAELTKLAAELKKKCGCGGAVKEG-----IIEIQGD 87

Query: 439 QRKNVATFLVQAGIAKK 489
           +R  + + L   G+  K
Sbjct: 88  KRDLIKSLLEAKGMKVK 104

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>O42929:DENR_SCHPO Density-regulated protein homolog - Schizosaccharomyces pombe|
           (Fission yeast)
          Length = 190

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +1

Query: 265 VHVRVQQRNGRKSLTTVQGLKK-EFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 441
           V ++  +R  RK +TTVQGL        K  K L  +F    +V +  +    I +QGD 
Sbjct: 99  VLIKTIERTKRKRVTTVQGLDAFGIETKKAAKMLANKFATGASVTKTADKKDEIVVQGDL 158

Query: 442 RKNVATFLVQ 471
             ++  F+++
Sbjct: 159 NYDIFDFILE 168

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>P32870:CYA1_DROME Ca(2+)/calmodulin-responsive adenylate cyclase - Drosophila|
            melanogaster (Fruit fly)
          Length = 2248

 Score = 30.8 bits (68), Expect = 5.9
 Identities = 20/70 (28%), Positives = 27/70 (38%)
 Frame = +3

Query: 486  EGAHQDPRLLSQGHRHHR*MLEPPASSSPILKT*GILYILPLVWTVSCLMQVVLSPDYYA 665
            EG    PR+++ GH HHR     PA             + PL W   C +QV  +     
Sbjct: 1603 EGDEDSPRMVNGGHLHHRNGYHLPAGG----------LVNPLQWLYPCDIQVDPTSPVVD 1652

Query: 666  AVPAHQYGLS 695
                H + LS
Sbjct: 1653 MAHLHDFELS 1662


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 105,600,576
Number of extensions: 2113466
Number of successful extensions: 5788
Number of sequences better than 10.0: 40
Number of HSP's gapped: 5781
Number of HSP's successfully gapped: 40
Length of query: 254
Length of database: 100,686,439
Length adjustment: 111
Effective length of query: 143
Effective length of database: 70,239,694
Effective search space: 10044276242
Effective search space used: 10044276242
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result