| Clone Name | FLbaf87o08 |
|---|---|
| Clone Library Name | barley_pub |
>Q14190:SIM2_HUMAN Single-minded homolog 2 - Homo sapiens (Human)| Length = 667 Score = 34.3 bits (77), Expect = 0.82 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 4/60 (6%) Frame = -1 Query: 832 CGLFHIIFIHQLGKGKRRKTARHFNLLGSNRCSYNWVEFSA----KS*GSPPHCATGLEY 665 C +FH+ + H L K + T +++ LL S R + WV+ A S S PHC + Y Sbjct: 272 CDVFHLRYAHHLLLVKGQVTTKYYRLL-SKRGGWVWVQSYATVVHNSRSSRPHCIVSVNY 330
>Q9JHX2:SP5_MOUSE Transcription factor Sp5 - Mus musculus (Mouse)| Length = 398 Score = 32.7 bits (73), Expect = 2.4 Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 2/97 (2%) Frame = +2 Query: 245 DLDPHEGQVLDVIQS*CRLAASSMGARCDGSPWFQRVYDITE-EPVLPGRHFCSFPSRES 421 D ++ Q+ ++Q+ LAA++ R P Q E EP +H C P Sbjct: 246 DFAQYQSQIAALLQTKAPLAATARRCRRCRCPNCQAAGGAPEAEPGKKKQHVCHVPGCGK 305 Query: 422 HVGTTRHCQRIPKWISSSSPFAVDKI-CSDNYEHSEE 529 G T H + +W + PF + + C ++ S+E Sbjct: 306 VYGKTSHLKAHLRWHTGERPFVCNWLFCGKSFTRSDE 342
>Q6BEB4:SP5_HUMAN Transcription factor Sp5 - Homo sapiens (Human)| Length = 398 Score = 32.7 bits (73), Expect = 2.4 Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 2/97 (2%) Frame = +2 Query: 245 DLDPHEGQVLDVIQS*CRLAASSMGARCDGSPWFQRVYDITE-EPVLPGRHFCSFPSRES 421 D ++ Q+ ++Q+ LAA++ R P Q E EP +H C P Sbjct: 246 DFAQYQSQIAALLQTKAPLAATARRCRRCRCPNCQAAGGAPEAEPGKKKQHVCHVPGCGK 305 Query: 422 HVGTTRHCQRIPKWISSSSPFAVDKI-CSDNYEHSEE 529 G T H + +W + PF + + C ++ S+E Sbjct: 306 VYGKTSHLKAHLRWHTGERPFVCNWLFCGKSFTRSDE 342
>Q5B7W0:GPI14_EMENI GPI mannosyltransferase 1 - Emericella nidulans (Aspergillus| nidulans) Length = 443 Score = 30.8 bits (68), Expect = 9.0 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Frame = +3 Query: 360 TLLRNPFYLAVIFVVFLVGKAMWVQLDIANEFR--NGFLPALLSLSTKF 500 +LLRNP + ++++G+A+W+Q EF + FLP L S F Sbjct: 365 SLLRNPRLGIAVAALWILGQALWLQQGYLLEFLGISSFLPGLFLASLGF 413
>Q61079:SIM2_MOUSE Single-minded homolog 2 - Mus musculus (Mouse)| Length = 657 Score = 30.8 bits (68), Expect = 9.1 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%) Frame = -1 Query: 832 CGLFHIIFIHQLGKGKRRKTARHFNLLGSNRCSYNWVEFSA----KS*GSPPHCATGLEY 665 C FH+ + H L K + T +++ LL S + WV+ A S S PHC + Y Sbjct: 272 CDTFHLRYAHHLLLVKGQVTTKYYRLL-SKLGGWVWVQSYATVVHNSRSSRPHCIVSVNY 330 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 163,884,356 Number of extensions: 3433996 Number of successful extensions: 8272 Number of sequences better than 10.0: 5 Number of HSP's gapped: 8268 Number of HSP's successfully gapped: 5 Length of query: 334 Length of database: 100,686,439 Length adjustment: 114 Effective length of query: 220 Effective length of database: 69,416,809 Effective search space: 15271697980 Effective search space used: 15271697980 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)