ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf85e01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY956330.1| Triticum aestivum salt tolerant protein (SC) mRNA... 745 0.0
2emb|CT834125.1| Oryza sativa (indica cultivar-group) cDNA clone:... 523 e-145
3ref|NM_001069875.1| Oryza sativa (japonica cultivar-group) Os09g... 523 e-145
4dbj|AK120561.1| Oryza sativa (japonica cultivar-group) cDNA clon... 523 e-145
5gb|DQ244312.1| Zea mays clone 4688 mRNA sequence 329 1e-86
6dbj|AK121475.1| Oryza sativa (japonica cultivar-group) cDNA clon... 270 8e-69
7dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 228 3e-56
8dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic D... 228 3e-56
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 155 3e-34
10dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic D... 155 3e-34
11gb|AY110098.1| Zea mays CL30475_1 mRNA sequence 119 2e-23
12emb|CT829293.1| Oryza sativa (indica cultivar-group) cDNA clone:... 109 2e-20
13ref|NM_001053710.1| Oryza sativa (japonica cultivar-group) Os02g... 109 2e-20
14dbj|AK068953.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 2e-20
15dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 98 6e-17
16dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic D... 98 6e-17
17emb|CT835001.1| Oryza sativa (indica cultivar-group) cDNA clone:... 60 1e-05
18ref|NM_001049140.1| Oryza sativa (japonica cultivar-group) Os01g... 60 1e-05
19dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-05
20dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-05
21dbj|AP000816.1| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-05
22ref|NM_103353.2| Arabidopsis thaliana unknown protein (AT1G36980... 52 0.003
23gb|AY079344.1| Arabidopsis thaliana unknown protein (At1g36980) ... 52 0.003
24gb|AY050785.1| Arabidopsis thaliana unknown protein (At1g36980) ... 52 0.003
25emb|BX815339.1|CNS0ABH2 Arabidopsis thaliana Full-length cDNA Co... 52 0.003
26gb|AC020646.2|AC020646 Genomic sequence for Arabidopsis thaliana... 50 0.013
27gb|CP000325.1| Mycobacterium ulcerans Agy99, complete genome 44 0.83
28gb|CP000481.1| Acidothermus cellulolyticus 11B, complete genome 44 0.83
29gb|AC020626.6|AC020626 Homo sapiens 3 BAC RP11-41F5 (Roswell Par... 44 0.83
30emb|AM236080.1| Rhizobium leguminosarum bv. viciae chromosome co... 42 3.3
31gb|AC151782.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 42 3.3
32gb|AC132120.3| Mus musculus BAC clone RP23-479B19 from chromosom... 42 3.3
33gb|AC104445.2| Homo sapiens chromosome 3 clone RP11-444P10, comp... 42 3.3
34gb|AC106884.5| Homo sapiens BAC clone RP11-1366O24 from 4, compl... 42 3.3
35emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB 42 3.3
36gb|AC154343.1| Mus musculus BAC clone RP23-235M17 from 17, compl... 42 3.3

>gb|AY956330.1| Triticum aestivum salt tolerant protein (SC) mRNA, complete cds
          Length = 579
 Score =  745 bits (376), Expect = 0.0
 Identities = 415/428 (96%)
 Strand = Plus / Plus

                                                                       
Query: 99  gcggccatggagaacctggcgatgctgtgggcgatcatcgggccgggcgtcgccggcgcg 158
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 17  gcggccatggagaacctggcgatgctgtgggggatcatcgggccgggcgtcgccggcgcg 76

                                                                       
Query: 159 ctcttcggcgccggatggtggttctgggtcgacgccgtcgtctgcagcgccgtccaggtc 218
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77  ctcttcggcgccggctggtggttctgggtcgacgccgtcgtctgcagcgccgtccaggtc 136

                                                                       
Query: 219 tccttcatccactacctgcccgggatcttcgcgtcgctggccgcgctcatgttcaattgc 278
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 tccttcatccactacctgcccgggatcttcgcgtcgctggccgcgctcatgttcaattgc 196

                                                                       
Query: 279 gtcgacaaggatgccatcgggaacgactactactcgtcctatggggatgattccgagtgg 338
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gtcgacaaggatgccatcgggaacgactactactcgtcctatggggatgattccgagtgg 256

                                                                       
Query: 339 agggtgaagctttggcttttcgtcgcctatgttgtctctttcgtctgcctagctggatca 398
           ||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||| 
Sbjct: 257 agggtgaagctttggcttttcgtcgcctacgtcgtctctttcgtctgcctggctggatcg 316

                                                                       
Query: 399 gtgggtttgctggtgcaagatgccttgacagacaagggcccttctgtgtggactggtgtt 458
           ||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 317 gtgggtttgttggtgcaagacgccctgacagacaagggcccttctgtgtggactggtgtt 376

                                                                       
Query: 459 gctggcgttctgcaatgcgtttttgtgttgataagtgggttgacatactggacgtgccac 518
           || |||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 377 gccggcgttctgcaatgtgttttcgtgttgataagcgggttgacatactggacgtgccac 436

                   
Query: 519 accgagga 526
           ||||||||
Sbjct: 437 accgagga 444



 Score =  131 bits (66), Expect = 5e-27
 Identities = 89/94 (94%), Gaps = 2/94 (2%)
 Strand = Plus / Plus

                                                                       
Query: 601 cccgtgtgtggtcctgtgtaaaa-aatatgttcattccagggcgggattactgggtgtct 659
           ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| 
Sbjct: 487 cccgtgtgtggtcctgtgtaaaaaaatatgttcattccagggcgggattacttggtgtcc 546

                                             
Query: 660 gtgtgtgcatagctgactgcttccctgaaatgga 693
           ||||||||||||||||| |||| |||||||||||
Sbjct: 547 gtgtgtgcatagctgaccgctt-cctgaaatgga 579



to top

>emb|CT834125.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI004M03, full
           insert sequence
          Length = 745

 Score =  523 bits (264), Expect = e-145
 Identities = 387/428 (90%)
 Strand = Plus / Plus

                                                                       
Query: 102 gccatggagaacctggcgatgctgtgggcgatcatcgggccgggcgtcgccggcgcgctc 161
           ||||||||||| || ||| |||| |||| ||||||||||||||| |||||||| ||| ||
Sbjct: 129 gccatggagaatcttgcgctgctttgggggatcatcgggccgggagtcgccggtgcggtc 188

                                                                       
Query: 162 ttcggcgccggatggtggttctgggtcgacgccgtcgtctgcagcgccgtccaggtctcc 221
           ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 189 ttcggcgccgggtggtggttctgggtcgacgccgtcgtctgcagctccgtccaggtctcc 248

                                                                       
Query: 222 ttcatccactacctgcccgggatcttcgcgtcgctggccgcgctcatgttcaattgcgtc 281
           ||| |||||||||| |||||||| |||||||||||||||||||||||||||||   ||| 
Sbjct: 249 ttcctccactacctacccgggatattcgcgtcgctggccgcgctcatgttcaacgccgtg 308

                                                                       
Query: 282 gacaaggatgccatcgggaacgactactactcgtcctatggggatgattccgagtggagg 341
            |||||||||  |||||  ||||||| |||||| |||| ||||| |||||||||||||||
Sbjct: 309 aacaaggatgagatcggatacgactattactcgccctacggggacgattccgagtggagg 368

                                                                       
Query: 342 gtgaagctttggcttttcgtcgcctatgttgtctctttcgtctgcctagctggatcagtg 401
           ||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||
Sbjct: 369 gtgaagctttggctttttgtggcgtatgttgtctctttcgtctgcctagctggatcagtg 428

                                                                       
Query: 402 ggtttgctggtgcaagatgccttgacagacaagggcccttctgtgtggactggtgttgct 461
           ||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 429 ggtatgttggtgcaagatgccttgacagacaaaggcccttctgtgtggactggtgttgct 488

                                                                       
Query: 462 ggcgttctgcaatgcgtttttgtgttgataagtgggttgacatactggacgtgccacacc 521
           || ||||||||||| ||| |||| |||||||||||||||| ||| |||||||| ||| | 
Sbjct: 489 ggtgttctgcaatgtgttcttgtattgataagtgggttgatatattggacgtgtcactct 548

                   
Query: 522 gaggacta 529
           ||||||||
Sbjct: 549 gaggacta 556



to top

>ref|NM_001069875.1| Oryza sativa (japonica cultivar-group) Os09g0453000 (Os09g0453000)
           mRNA, complete cds
          Length = 665

 Score =  523 bits (264), Expect = e-145
 Identities = 387/428 (90%)
 Strand = Plus / Plus

                                                                       
Query: 102 gccatggagaacctggcgatgctgtgggcgatcatcgggccgggcgtcgccggcgcgctc 161
           ||||||||||| || ||| |||| |||| ||||||||||||||| |||||||| ||| ||
Sbjct: 45  gccatggagaatcttgcgctgctttgggggatcatcgggccgggagtcgccggtgcggtc 104

                                                                       
Query: 162 ttcggcgccggatggtggttctgggtcgacgccgtcgtctgcagcgccgtccaggtctcc 221
           ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 105 ttcggcgccgggtggtggttctgggtcgacgccgtcgtctgcagctccgtccaggtctcc 164

                                                                       
Query: 222 ttcatccactacctgcccgggatcttcgcgtcgctggccgcgctcatgttcaattgcgtc 281
           ||| |||||||||| |||||||| |||||||||||||||||||||||||||||   ||| 
Sbjct: 165 ttcctccactacctacccgggatattcgcgtcgctggccgcgctcatgttcaacgccgtg 224

                                                                       
Query: 282 gacaaggatgccatcgggaacgactactactcgtcctatggggatgattccgagtggagg 341
            |||||||||  |||||  ||||||| |||||| |||| ||||| |||||||||||||||
Sbjct: 225 aacaaggatgagatcggatacgactattactcgccctacggggacgattccgagtggagg 284

                                                                       
Query: 342 gtgaagctttggcttttcgtcgcctatgttgtctctttcgtctgcctagctggatcagtg 401
           ||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||
Sbjct: 285 gtgaagctttggctttttgtggcgtatgttgtctctttcgtctgcctagctggatcagtg 344

                                                                       
Query: 402 ggtttgctggtgcaagatgccttgacagacaagggcccttctgtgtggactggtgttgct 461
           ||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 345 ggtatgttggtgcaagatgccttgacagacaaaggcccttctgtgtggactggtgttgct 404

                                                                       
Query: 462 ggcgttctgcaatgcgtttttgtgttgataagtgggttgacatactggacgtgccacacc 521
           || ||||||||||| ||| |||| |||||||||||||||| ||| |||||||| ||| | 
Sbjct: 405 ggtgttctgcaatgtgttcttgtattgataagtgggttgatatattggacgtgtcactct 464

                   
Query: 522 gaggacta 529
           ||||||||
Sbjct: 465 gaggacta 472



to top

>dbj|AK120561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132I06, full
           insert sequence
          Length = 666

 Score =  523 bits (264), Expect = e-145
 Identities = 387/428 (90%)
 Strand = Plus / Plus

                                                                       
Query: 102 gccatggagaacctggcgatgctgtgggcgatcatcgggccgggcgtcgccggcgcgctc 161
           ||||||||||| || ||| |||| |||| ||||||||||||||| |||||||| ||| ||
Sbjct: 46  gccatggagaatcttgcgctgctttgggggatcatcgggccgggagtcgccggtgcggtc 105

                                                                       
Query: 162 ttcggcgccggatggtggttctgggtcgacgccgtcgtctgcagcgccgtccaggtctcc 221
           ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 106 ttcggcgccgggtggtggttctgggtcgacgccgtcgtctgcagctccgtccaggtctcc 165

                                                                       
Query: 222 ttcatccactacctgcccgggatcttcgcgtcgctggccgcgctcatgttcaattgcgtc 281
           ||| |||||||||| |||||||| |||||||||||||||||||||||||||||   ||| 
Sbjct: 166 ttcctccactacctacccgggatattcgcgtcgctggccgcgctcatgttcaacgccgtg 225

                                                                       
Query: 282 gacaaggatgccatcgggaacgactactactcgtcctatggggatgattccgagtggagg 341
            |||||||||  |||||  ||||||| |||||| |||| ||||| |||||||||||||||
Sbjct: 226 aacaaggatgagatcggatacgactattactcgccctacggggacgattccgagtggagg 285

                                                                       
Query: 342 gtgaagctttggcttttcgtcgcctatgttgtctctttcgtctgcctagctggatcagtg 401
           ||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||
Sbjct: 286 gtgaagctttggctttttgtggcgtatgttgtctctttcgtctgcctagctggatcagtg 345

                                                                       
Query: 402 ggtttgctggtgcaagatgccttgacagacaagggcccttctgtgtggactggtgttgct 461
           ||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 346 ggtatgttggtgcaagatgccttgacagacaaaggcccttctgtgtggactggtgttgct 405

                                                                       
Query: 462 ggcgttctgcaatgcgtttttgtgttgataagtgggttgacatactggacgtgccacacc 521
           || ||||||||||| ||| |||| |||||||||||||||| ||| |||||||| ||| | 
Sbjct: 406 ggtgttctgcaatgtgttcttgtattgataagtgggttgatatattggacgtgtcactct 465

                   
Query: 522 gaggacta 529
           ||||||||
Sbjct: 466 gaggacta 473



to top

>gb|DQ244312.1| Zea mays clone 4688 mRNA sequence
          Length = 645

 Score =  329 bits (166), Expect = 1e-86
 Identities = 313/362 (86%)
 Strand = Plus / Plus

                                                                       
Query: 132 atcatcgggccgggcgtcgccggcgcgctcttcggcgccggatggtggttctgggtcgac 191
           |||||||| ||||||||  |||| ||  ||||||| |||||||||||||||||||| |||
Sbjct: 96  atcatcggcccgggcgtgtccggtgccatcttcggggccggatggtggttctgggtggac 155

                                                                       
Query: 192 gccgtcgtctgcagcgccgtccaggtctccttcatccactacctgcccgggatcttcgcg 251
           || ||||| |||||||| ||||||||||||||| |||||||||| || ||||||||||| 
Sbjct: 156 gcggtcgtttgcagcgcggtccaggtctccttcctccactaccttccagggatcttcgct 215

                                                                       
Query: 252 tcgctggccgcgctcatgttcaattgcgtcgacaaggatgccatcgggaacgactactac 311
           |||||||| ||||||||||||||||||||  |||||||||  |||||  ||||||| |||
Sbjct: 216 tcgctggcggcgctcatgttcaattgcgtgaacaaggatgagatcggatacgactattac 275

                                                                       
Query: 312 tcgtcctatggggatgattccgagtggagggtgaagctttggcttttcgtcgcctatgtt 371
           ||  |||| ||||| ||||| |||||||| |||||||| |||||||| || || ||||| 
Sbjct: 276 tcaccctacggggacgattcagagtggagagtgaagctctggctttttgtggcatatgtc 335

                                                                       
Query: 372 gtctctttcgtctgcctagctggatcagtgggtttgctggtgcaagatgccttgacagac 431
           || ||||| |||||  |||||||||| ||||||||  |||||||||||||  ||||  ||
Sbjct: 336 gtttcttttgtctgtttagctggatccgtgggtttattggtgcaagatgcgctgacgaac 395

                                                                       
Query: 432 aagggcccttctgtgtggactggtgttgctggcgttctgcaatgcgtttttgtgttgata 491
           |||||||| ||||| ||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 396 aagggcccatctgtctggactggtgttgctggcgttctgcaatgtgttcttgtgttgata 455

             
Query: 492 ag 493
           ||
Sbjct: 456 ag 457



to top

>dbj|AK121475.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023148P12, full
           insert sequence
          Length = 466

 Score =  270 bits (136), Expect = 8e-69
 Identities = 214/240 (89%)
 Strand = Plus / Plus

                                                                       
Query: 102 gccatggagaacctggcgatgctgtgggcgatcatcgggccgggcgtcgccggcgcgctc 161
           ||||||||||| || ||| |||| |||| ||||||||||||||| |||||||| ||| ||
Sbjct: 46  gccatggagaatcttgcgctgctttgggggatcatcgggccgggagtcgccggtgcggtc 105

                                                                       
Query: 162 ttcggcgccggatggtggttctgggtcgacgccgtcgtctgcagcgccgtccaggtctcc 221
           ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 106 ttcggcgccgggtggtggttctgggtcgacgccgtcgtctgcagctccgtccaggtctcc 165

                                                                       
Query: 222 ttcatccactacctgcccgggatcttcgcgtcgctggccgcgctcatgttcaattgcgtc 281
           ||| |||||||||| |||||||| |||||||||||||||||||||||||||||   ||| 
Sbjct: 166 ttcctccactacctacccgggatattcgcgtcgctggccgcgctcatgttcaacgccgtg 225

                                                                       
Query: 282 gacaaggatgccatcgggaacgactactactcgtcctatggggatgattccgagtggagg 341
            |||||||||  |||||  ||||||| |||||| |||| ||||| |||||||||||||||
Sbjct: 226 aacaaggatgagatcggatacgactattactcgccctacggggacgattccgagtggagg 285



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score =  228 bits (115), Expect = 3e-56
 Identities = 145/155 (93%)
 Strand = Plus / Minus

                                                                            
Query: 339      agggtgaagctttggcttttcgtcgcctatgttgtctctttcgtctgcctagctggatca 398
                |||||||||||||||||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 16934049 agggtgaagctttggctttttgtggcgtatgttgtctctttcgtctgcctagctggatca 16933990

                                                                            
Query: 399      gtgggtttgctggtgcaagatgccttgacagacaagggcccttctgtgtggactggtgtt 458
                |||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 16933989 gtgggtatgttggtgcaagatgccttgacagacaaaggcccttctgtgtggactggtgtt 16933930

                                                   
Query: 459      gctggcgttctgcaatgcgtttttgtgttgataag 493
                ||||| ||||||||||| ||| |||| ||||||||
Sbjct: 16933929 gctggtgttctgcaatgtgttcttgtattgataag 16933895



 Score =  182 bits (92), Expect = 1e-42
 Identities = 128/140 (91%)
 Strand = Plus / Minus

                                                                            
Query: 102      gccatggagaacctggcgatgctgtgggcgatcatcgggccgggcgtcgccggcgcgctc 161
                ||||||||||| || ||| |||| |||| ||||||||||||||| |||||||| ||| ||
Sbjct: 16935678 gccatggagaatcttgcgctgctttgggggatcatcgggccgggagtcgccggtgcggtc 16935619

                                                                            
Query: 162      ttcggcgccggatggtggttctgggtcgacgccgtcgtctgcagcgccgtccaggtctcc 221
                ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 16935618 ttcggcgccgggtggtggttctgggtcgacgccgtcgtctgcagctccgtccaggtctcc 16935559

                                    
Query: 222      ttcatccactacctgcccgg 241
                ||| |||||||||| |||||
Sbjct: 16935558 ttcctccactacctacccgg 16935539



 Score = 91.7 bits (46), Expect = 4e-15
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                            
Query: 240      gggatcttcgcgtcgctggccgcgctcatgttcaattgcgtcgacaaggatgccatcggg 299
                ||||| |||||||||||||||||||||||||||||   |||  |||||||||  ||||| 
Sbjct: 16935441 gggatattcgcgtcgctggccgcgctcatgttcaacgccgtgaacaaggatgagatcgga 16935382

                                                          
Query: 300      aacgactactactcgtcctatggggatgattccgagtggagg 341
                 ||||||| |||||| |||| ||||| |||||||||||||||
Sbjct: 16935381 tacgactattactcgccctacggggacgattccgagtggagg 16935340



to top

>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0488D02
          Length = 154537

 Score =  228 bits (115), Expect = 3e-56
 Identities = 145/155 (93%)
 Strand = Plus / Minus

                                                                         
Query: 339   agggtgaagctttggcttttcgtcgcctatgttgtctctttcgtctgcctagctggatca 398
             |||||||||||||||||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 63862 agggtgaagctttggctttttgtggcgtatgttgtctctttcgtctgcctagctggatca 63803

                                                                         
Query: 399   gtgggtttgctggtgcaagatgccttgacagacaagggcccttctgtgtggactggtgtt 458
             |||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 63802 gtgggtatgttggtgcaagatgccttgacagacaaaggcccttctgtgtggactggtgtt 63743

                                                
Query: 459   gctggcgttctgcaatgcgtttttgtgttgataag 493
             ||||| ||||||||||| ||| |||| ||||||||
Sbjct: 63742 gctggtgttctgcaatgtgttcttgtattgataag 63708



 Score =  182 bits (92), Expect = 1e-42
 Identities = 128/140 (91%)
 Strand = Plus / Minus

                                                                         
Query: 102   gccatggagaacctggcgatgctgtgggcgatcatcgggccgggcgtcgccggcgcgctc 161
             ||||||||||| || ||| |||| |||| ||||||||||||||| |||||||| ||| ||
Sbjct: 65491 gccatggagaatcttgcgctgctttgggggatcatcgggccgggagtcgccggtgcggtc 65432

                                                                         
Query: 162   ttcggcgccggatggtggttctgggtcgacgccgtcgtctgcagcgccgtccaggtctcc 221
             ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 65431 ttcggcgccgggtggtggttctgggtcgacgccgtcgtctgcagctccgtccaggtctcc 65372

                                 
Query: 222   ttcatccactacctgcccgg 241
             ||| |||||||||| |||||
Sbjct: 65371 ttcctccactacctacccgg 65352



 Score = 91.7 bits (46), Expect = 4e-15
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                         
Query: 240   gggatcttcgcgtcgctggccgcgctcatgttcaattgcgtcgacaaggatgccatcggg 299
             ||||| |||||||||||||||||||||||||||||   |||  |||||||||  ||||| 
Sbjct: 65254 gggatattcgcgtcgctggccgcgctcatgttcaacgccgtgaacaaggatgagatcgga 65195

                                                       
Query: 300   aacgactactactcgtcctatggggatgattccgagtggagg 341
              ||||||| |||||| |||| ||||| |||||||||||||||
Sbjct: 65194 tacgactattactcgccctacggggacgattccgagtggagg 65153



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score =  155 bits (78), Expect = 3e-34
 Identities = 126/142 (88%)
 Strand = Plus / Minus

                                                                            
Query: 100      cggccatggagaacctggcgatgctgtgggcgatcatcgggccgggcgtcgccggcgcgc 159
                |||||||||| ||||||||| ||||| |||  ||| |||| ||||| |||||||||||  
Sbjct: 23067316 cggccatggataacctggcgctgctgcggggaatcctcggcccgggggtcgccggcgccg 23067257

                                                                            
Query: 160      tcttcggcgccggatggtggttctgggtcgacgccgtcgtctgcagcgccgtccaggtct 219
                |||| ||||  || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23067256 tctttggcgtgggttggtggttctgggtcgacgccgtcgtctgcagcgccgtccaggtct 23067197

                                      
Query: 220      ccttcatccactacctgcccgg 241
                ||||| |||||||||| |||||
Sbjct: 23067196 ccttcctccactacctccccgg 23067175



 Score =  107 bits (54), Expect = 7e-20
 Identities = 93/106 (87%)
 Strand = Plus / Minus

                                                                            
Query: 388      tagctggatcagtgggtttgctggtgcaagatgccttgacagacaagggcccttctgtgt 447
                |||||||  |||| |||||| ||||||||||||| ||||| ||||||||||| |||||||
Sbjct: 23065150 tagctggtgcagttggtttgttggtgcaagatgctttgactgacaagggcccgtctgtgt 23065091

                                                              
Query: 448      ggactggtgttgctggcgttctgcaatgcgtttttgtgttgataag 493
                |||||||||| ||||| ||||||||||| ||  |||| ||||||||
Sbjct: 23065090 ggactggtgtagctggtgttctgcaatgtgtccttgtattgataag 23065045



 Score = 48.1 bits (24), Expect = 0.053
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 241      ggatcttcgcgtcgctggccgcgctcatgttcaattgcgt 280
                |||||||||| |||||||| || ||||||||||| |||||
Sbjct: 23067098 ggatcttcgcctcgctggcggcactcatgttcaactgcgt 23067059



to top

>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470B03
          Length = 163371

 Score =  155 bits (78), Expect = 3e-34
 Identities = 126/142 (88%)
 Strand = Plus / Minus

                                                                          
Query: 100    cggccatggagaacctggcgatgctgtgggcgatcatcgggccgggcgtcgccggcgcgc 159
              |||||||||| ||||||||| ||||| |||  ||| |||| ||||| |||||||||||  
Sbjct: 127044 cggccatggataacctggcgctgctgcggggaatcctcggcccgggggtcgccggcgccg 126985

                                                                          
Query: 160    tcttcggcgccggatggtggttctgggtcgacgccgtcgtctgcagcgccgtccaggtct 219
              |||| ||||  || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126984 tctttggcgtgggttggtggttctgggtcgacgccgtcgtctgcagcgccgtccaggtct 126925

                                    
Query: 220    ccttcatccactacctgcccgg 241
              ||||| |||||||||| |||||
Sbjct: 126924 ccttcctccactacctccccgg 126903



 Score =  107 bits (54), Expect = 7e-20
 Identities = 93/106 (87%)
 Strand = Plus / Minus

                                                                          
Query: 388    tagctggatcagtgggtttgctggtgcaagatgccttgacagacaagggcccttctgtgt 447
              |||||||  |||| |||||| ||||||||||||| ||||| ||||||||||| |||||||
Sbjct: 124878 tagctggtgcagttggtttgttggtgcaagatgctttgactgacaagggcccgtctgtgt 124819

                                                            
Query: 448    ggactggtgttgctggcgttctgcaatgcgtttttgtgttgataag 493
              |||||||||| ||||| ||||||||||| ||  |||| ||||||||
Sbjct: 124818 ggactggtgtagctggtgttctgcaatgtgtccttgtattgataag 124773



 Score = 48.1 bits (24), Expect = 0.053
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                      
Query: 241    ggatcttcgcgtcgctggccgcgctcatgttcaattgcgt 280
              |||||||||| |||||||| || ||||||||||| |||||
Sbjct: 126826 ggatcttcgcctcgctggcggcactcatgttcaactgcgt 126787



to top

>gb|AY110098.1| Zea mays CL30475_1 mRNA sequence
          Length = 603

 Score =  119 bits (60), Expect = 2e-23
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                       
Query: 390 gctggatcagtgggtttgctggtgcaagatgccttgacagacaagggcccttctgtgtgg 449
           |||||||| ||||||||  |||||||||||||  ||||  |||||||||| ||||| |||
Sbjct: 301 gctggatccgtgggtttattggtgcaagatgcgctgacgaacaagggcccatctgtctgg 360

                                                       
Query: 450 actggtgttgctggcgttctgcaatgcgtttttgtgttgataag 493
           |||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 361 actggtgttgctggcgttctgcaatgtgttcttgtgttgataag 404



 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 98/115 (85%)
 Strand = Plus / Plus

                                                                       
Query: 240 gggatcttcgcgtcgctggccgcgctcatgttcaattgcgtcgacaaggatgccatcggg 299
           ||||| ||||| |||||||| ||||||||||||||||||||  |||||||||  ||||| 
Sbjct: 151 gggattttcgcttcgctggcggcgctcatgttcaattgcgtgaacaaggatgagatcgga 210

                                                                  
Query: 300 aacgactactactcgtcctatggggatgattccgagtggagggtgaagctttggc 354
            ||||||| |||||  |||| ||||| ||||| |||||||| |||||||| ||||
Sbjct: 211 tacgactattactcaccctacggggacgattcagagtggagagtgaagctctggc 265



 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 64/75 (85%)
 Strand = Plus / Plus

                                                                       
Query: 132 atcatcgggccgggcgtcgccggcgcgctcttcggcgccggatggtggttctgggtcgac 191
           |||||||| ||||||||  |||| ||  ||||||| |||||||||||||||||||| |||
Sbjct: 43  atcatcggcccgggcgtgtccggtgccatcttcggggccggatggtggttctgggtggac 102

                          
Query: 192 gccgtcgtctgcagc 206
            | ||||| ||||||
Sbjct: 103 ccggtcgtttgcagc 117



to top

>emb|CT829293.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN032E08, full
           insert sequence
          Length = 705

 Score =  109 bits (55), Expect = 2e-20
 Identities = 121/143 (84%)
 Strand = Plus / Plus

                                                                       
Query: 138 gggccgggcgtcgccggcgcgctcttcggcgccggatggtggttctgggtcgacgccgtc 197
           ||||||||||||||||||||  | ||||| | ||| ||||||||||||||||||||||||
Sbjct: 87  gggccgggcgtcgccggcgccgtattcggggtcggctggtggttctgggtcgacgccgtc 146

                                                                       
Query: 198 gtctgcagcgccgtccaggtctccttcatccactacctgcccgggatcttcgcgtcgctg 257
           ||||||||||||| |   ||| | ||| | |||||||| |||||| | || || ||| | 
Sbjct: 147 gtctgcagcgccgccgccgtcccgttccttcactacctccccgggttatttgcttcgttc 206

                                  
Query: 258 gccgcgctcatgttcaattgcgt 280
           ||||||||||||||||| |||||
Sbjct: 207 gccgcgctcatgttcaactgcgt 229



 Score = 50.1 bits (25), Expect = 0.013
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 447 tggactggtgttgctggcgttctgcaatgcgtttttgtgttgataagtgggttgacatac 506
           |||||||||||||||||||| || || |  || |||||| | |||||||||||||  |||
Sbjct: 393 tggactggtgttgctggcgtcctacagtctgtgtttgtgcttataagtgggttgatgtac 452

                
Query: 507 tggac 511
           |||||
Sbjct: 453 tggac 457



to top

>ref|NM_001053710.1| Oryza sativa (japonica cultivar-group) Os02g0566900 (Os02g0566900)
           mRNA, complete cds
          Length = 731

 Score =  109 bits (55), Expect = 2e-20
 Identities = 121/143 (84%)
 Strand = Plus / Plus

                                                                       
Query: 138 gggccgggcgtcgccggcgcgctcttcggcgccggatggtggttctgggtcgacgccgtc 197
           ||||||||||||||||||||  | ||||| | ||| ||||||||||||||||||||||||
Sbjct: 109 gggccgggcgtcgccggcgccgtattcggggtcggctggtggttctgggtcgacgccgtc 168

                                                                       
Query: 198 gtctgcagcgccgtccaggtctccttcatccactacctgcccgggatcttcgcgtcgctg 257
           ||||||||||||| |   ||| | ||| | |||||||| |||||| | || || ||| | 
Sbjct: 169 gtctgcagcgccgccgccgtcccgttccttcactacctccccgggttatttgcttcgttc 228

                                  
Query: 258 gccgcgctcatgttcaattgcgt 280
           ||||||||||||||||| |||||
Sbjct: 229 gccgcgctcatgttcaactgcgt 251



 Score = 50.1 bits (25), Expect = 0.013
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 447 tggactggtgttgctggcgttctgcaatgcgtttttgtgttgataagtgggttgacatac 506
           |||||||||||||||||||| || || |  || |||||| | |||||||||||||  |||
Sbjct: 415 tggactggtgttgctggcgtcctacagtctgtgtttgtgcttataagtgggttgatgtac 474

                
Query: 507 tggac 511
           |||||
Sbjct: 475 tggac 479



to top

>dbj|AK068953.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003M06, full
           insert sequence
          Length = 733

 Score =  109 bits (55), Expect = 2e-20
 Identities = 121/143 (84%)
 Strand = Plus / Plus

                                                                       
Query: 138 gggccgggcgtcgccggcgcgctcttcggcgccggatggtggttctgggtcgacgccgtc 197
           ||||||||||||||||||||  | ||||| | ||| ||||||||||||||||||||||||
Sbjct: 111 gggccgggcgtcgccggcgccgtattcggggtcggctggtggttctgggtcgacgccgtc 170

                                                                       
Query: 198 gtctgcagcgccgtccaggtctccttcatccactacctgcccgggatcttcgcgtcgctg 257
           ||||||||||||| |   ||| | ||| | |||||||| |||||| | || || ||| | 
Sbjct: 171 gtctgcagcgccgccgccgtcccgttccttcactacctccccgggttatttgcttcgttc 230

                                  
Query: 258 gccgcgctcatgttcaattgcgt 280
           ||||||||||||||||| |||||
Sbjct: 231 gccgcgctcatgttcaactgcgt 253



 Score = 50.1 bits (25), Expect = 0.013
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 447 tggactggtgttgctggcgttctgcaatgcgtttttgtgttgataagtgggttgacatac 506
           |||||||||||||||||||| || || |  || |||||| | |||||||||||||  |||
Sbjct: 417 tggactggtgttgctggcgtcctacagtctgtgtttgtgcttataagtgggttgatgtac 476

                
Query: 507 tggac 511
           |||||
Sbjct: 477 tggac 481



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 97.6 bits (49), Expect = 6e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                            
Query: 138      gggccgggcgtcgccggcgcgctcttcggcgccggatggtggttctgggtcgacgccgtc 197
                ||||||||||||||||||||  | ||||| | ||| ||||||||||||||||||||||||
Sbjct: 21580036 gggccgggcgtcgccggcgccgtattcggggtcggctggtggttctgggtcgacgccgtc 21579977

                             
Query: 198      gtctgcagcgccg 210
                |||||||||||||
Sbjct: 21579976 gtctgcagcgccg 21579964



to top

>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0020D05
          Length = 158760

 Score = 97.6 bits (49), Expect = 6e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                         
Query: 138   gggccgggcgtcgccggcgcgctcttcggcgccggatggtggttctgggtcgacgccgtc 197
             ||||||||||||||||||||  | ||||| | ||| ||||||||||||||||||||||||
Sbjct: 68986 gggccgggcgtcgccggcgccgtattcggggtcggctggtggttctgggtcgacgccgtc 68927

                          
Query: 198   gtctgcagcgccg 210
             |||||||||||||
Sbjct: 68926 gtctgcagcgccg 68914



to top

>emb|CT835001.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN053I19, full
           insert sequence
          Length = 1156

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 139 ggccgggcgtcgccggcgcgctcttcggcgccgg 172
           ||||||||||||||| ||||||||||||||||||
Sbjct: 185 ggccgggcgtcgccgccgcgctcttcggcgccgg 218



to top

>ref|NM_001049140.1| Oryza sativa (japonica cultivar-group) Os01g0252600 (Os01g0252600)
           mRNA, complete cds
          Length = 1152

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 139 ggccgggcgtcgccggcgcgctcttcggcgccgg 172
           ||||||||||||||| ||||||||||||||||||
Sbjct: 344 ggccgggcgtcgccgccgcgctcttcggcgccgg 377



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                 
Query: 139     ggccgggcgtcgccggcgcgctcttcggcgccgg 172
               ||||||||||||||| ||||||||||||||||||
Sbjct: 8343655 ggccgggcgtcgccgccgcgctcttcggcgccgg 8343688



to top

>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0434D08
          Length = 161266

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                
Query: 139    ggccgggcgtcgccggcgcgctcttcggcgccgg 172
              ||||||||||||||| ||||||||||||||||||
Sbjct: 137586 ggccgggcgtcgccgccgcgctcttcggcgccgg 137619



to top

>dbj|AP000816.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
            clone:P0503G09
          Length = 59843

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                              
Query: 139  ggccgggcgtcgccggcgcgctcttcggcgccgg 172
            ||||||||||||||| ||||||||||||||||||
Sbjct: 8281 ggccgggcgtcgccgccgcgctcttcggcgccgg 8314



to top

>ref|NM_103353.2| Arabidopsis thaliana unknown protein (AT1G36980) mRNA, complete cds
          Length = 663

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 68/82 (82%)
 Strand = Plus / Plus

                                                                       
Query: 169 ccggatggtggttctgggtcgacgccgtcgtctgcagcgccgtccaggtctccttcatcc 228
           |||| |||||||| ||||||||||||||||| |||||  || |||| ||  ||||| |||
Sbjct: 103 ccgggtggtggttttgggtcgacgccgtcgtttgcagttccatccaagttcccttcgtcc 162

                                 
Query: 229 actacctgcccgggatcttcgc 250
           | ||||| ||||| || |||||
Sbjct: 163 attaccttcccggcatattcgc 184



to top

>gb|AY079344.1| Arabidopsis thaliana unknown protein (At1g36980) mRNA, complete cds
          Length = 439

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 68/82 (82%)
 Strand = Plus / Plus

                                                                       
Query: 169 ccggatggtggttctgggtcgacgccgtcgtctgcagcgccgtccaggtctccttcatcc 228
           |||| |||||||| ||||||||||||||||| |||||  || |||| ||  ||||| |||
Sbjct: 62  ccgggtggtggttttgggtcgacgccgtcgtttgcagttccatccaagttcccttcgtcc 121

                                 
Query: 229 actacctgcccgggatcttcgc 250
           | ||||| ||||| || |||||
Sbjct: 122 attaccttcccggcatattcgc 143



to top

>gb|AY050785.1| Arabidopsis thaliana unknown protein (At1g36980) mRNA, complete cds
          Length = 695

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 68/82 (82%)
 Strand = Plus / Plus

                                                                       
Query: 169 ccggatggtggttctgggtcgacgccgtcgtctgcagcgccgtccaggtctccttcatcc 228
           |||| |||||||| ||||||||||||||||| |||||  || |||| ||  ||||| |||
Sbjct: 103 ccgggtggtggttttgggtcgacgccgtcgtttgcagttccatccaagttcccttcgtcc 162

                                 
Query: 229 actacctgcccgggatcttcgc 250
           | ||||| ||||| || |||||
Sbjct: 163 attaccttcccggcatattcgc 184



to top

>emb|BX815339.1|CNS0ABH2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS53ZD07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 580

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 68/82 (82%)
 Strand = Plus / Plus

                                                                       
Query: 169 ccggatggtggttctgggtcgacgccgtcgtctgcagcgccgtccaggtctccttcatcc 228
           |||| |||||||| ||||||||||||||||| |||||  || |||| ||  ||||| |||
Sbjct: 58  ccgggtggtggttttgggtcgacgccgtcgtttgcagttccatccaagttcccttcgtcc 117

                                 
Query: 229 actacctgcccgggatcttcgc 250
           | ||||| ||||| || |||||
Sbjct: 118 attaccttcccggcatattcgc 139



to top

>gb|AC020646.2|AC020646 Genomic sequence for Arabidopsis thaliana BAC T32E20 from chromosome I,
             complete sequence
          Length = 103931

 Score = 50.1 bits (25), Expect = 0.013
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 169   ccggatggtggttctgggtcgacgccgtcgtctgcag 205
             |||| |||||||| ||||||||||||||||| |||||
Sbjct: 80459 ccgggtggtggttttgggtcgacgccgtcgtttgcag 80423



to top

>gb|CP000325.1| Mycobacterium ulcerans Agy99, complete genome
          Length = 5631606

 Score = 44.1 bits (22), Expect = 0.83
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 147    gtcgccggcgcgctcttcggcgccgg 172
              ||||||||||||| ||||||||||||
Sbjct: 400975 gtcgccggcgcgcccttcggcgccgg 401000



to top

>gb|CP000481.1| Acidothermus cellulolyticus 11B, complete genome
          Length = 2443540

 Score = 44.1 bits (22), Expect = 0.83
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 164    cggcgccggatggtggttctgggtcg 189
              ||||||||| ||||||||||||||||
Sbjct: 112833 cggcgccggctggtggttctgggtcg 112808



to top

>gb|AC020626.6|AC020626 Homo sapiens 3 BAC RP11-41F5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 170346

 Score = 44.1 bits (22), Expect = 0.83
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 651    tgggtgtctgtgtgtgcatagc 672
              ||||||||||||||||||||||
Sbjct: 135026 tgggtgtctgtgtgtgcatagc 135047



to top

>emb|AM236080.1| Rhizobium leguminosarum bv. viciae chromosome complete genome, strain
              3841
          Length = 5057142

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 148    tcgccggcgcgctcttcggcg 168
              |||||||||||||||||||||
Sbjct: 624549 tcgccggcgcgctcttcggcg 624569



to top

>gb|AC151782.1| Ornithorhynchus anatinus chromosome UNK clone OABb-208A1, complete
             sequence
          Length = 145600

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 555   actaggatggctggtaaaaat 575
             |||||||||||||||||||||
Sbjct: 58567 actaggatggctggtaaaaat 58587



to top

>gb|AC132120.3| Mus musculus BAC clone RP23-479B19 from chromosome 8, complete sequence
          Length = 173226

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 654   gtgtctgtgtgtgcatagctg 674
             |||||||||||||||||||||
Sbjct: 18162 gtgtctgtgtgtgcatagctg 18182



to top

>gb|AC104445.2| Homo sapiens chromosome 3 clone RP11-444P10, complete sequence
          Length = 201218

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 613   cctgtgtaaaaaatatgttca 633
             |||||||||||||||||||||
Sbjct: 31376 cctgtgtaaaaaatatgttca 31356



to top

>gb|AC106884.5| Homo sapiens BAC clone RP11-1366O24 from 4, complete sequence
          Length = 203424

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 715    atgtttttatcctaatttgtt 735
              |||||||||||||||||||||
Sbjct: 139162 atgtttttatcctaatttgtt 139142



to top

>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 142     cgggcgtcgccggcgcgctct 162
               |||||||||||||||||||||
Sbjct: 1616517 cgggcgtcgccggcgcgctct 1616497



to top

>gb|AC154343.1| Mus musculus BAC clone RP23-235M17 from 17, complete sequence
          Length = 172493

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 609   tggtcctgtgtaaaaaatatg 629
             |||||||||||||||||||||
Sbjct: 98337 tggtcctgtgtaaaaaatatg 98357


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 144,224,417
Number of extensions: 7661675
Number of successful extensions: 141502
Number of sequences better than 10.0: 36
Number of HSP's gapped: 141492
Number of HSP's successfully gapped: 50
Length of query: 866
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 844
Effective length of database: 18,508,616,841
Effective search space: 15621272613804
Effective search space used: 15621272613804
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top