ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf85c09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK062339:Os07g0661700 | 106 | 1e-23 | 2 | AY224540:Os04g0666900 | 35 | 0.041 | 3 | AK073209:Os04g0666900 | 35 | 0.041 | 4 | AY224541:Os03g0288600 | 30 | 1.3 | 5 | AK101532:Os03g0288600 | 30 | 1.3 | 6 | AK065540:Os03g0288600 | 30 | 1.3 | 7 | Os10g0194300:Os10g0194300 | 29 | 2.3 | 8 | AK068903:Os09g0420200 | 29 | 2.3 | 9 | Os07g0154400:Os07g0154400 | 28 | 6.6 | 10 | AK110371: | 28 | 6.6 | 11 | AK071891:Os04g0648500 | 27 | 8.6 | 12 | AK064227:Os04g0648500 | 27 | 8.6 |
|---|
>AK062339:Os07g0661700 | Length = 100 Score = 106 bits (264), Expect = 1e-23 Identities = 56/97 (57%), Positives = 68/97 (70%), Gaps = 3/97 (3%) Frame = +2 Query: 59 ATMSAGPEEALKAFEQRASDXXXXXXXXXXXXXNKDG---SSEASSSAMRDLQSKLDAAT 229 A +AG EEAL+ F RASD NKDG SE +SSA++DLQSKLDA Sbjct: 4 AAAAAGLEEALRPFHDRASDAETRLAKLEALLLNKDGLTSGSETNSSAVKDLQSKLDAVN 63 Query: 230 KECLAEKEQNRKLTVENEKLQYRVSHLIRTIKEAESR 340 ECLAEKE+N+KL +ENEKLQYR++HLIR +KEA+SR Sbjct: 64 TECLAEKEKNKKLIIENEKLQYRITHLIRALKEADSR 100
>AY224540:Os04g0666900 | Length = 1226 Score = 35.0 bits (79), Expect = 0.041 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = +2 Query: 167 GSSEASSSAMRDLQSKLDAATKECLAEKEQNRKLTVENEKLQYRVSHLIRTIKEAES 337 G+ S + L+ +L + KE A KE ++KLT+EN L +V L R E +S Sbjct: 684 GTVNNSIEMLAKLEEELKSCKKELDASKELSKKLTMENNLLDQKVQRLERAKSEEKS 740
>AK073209:Os04g0666900 | Length = 1202 Score = 35.0 bits (79), Expect = 0.041 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = +2 Query: 167 GSSEASSSAMRDLQSKLDAATKECLAEKEQNRKLTVENEKLQYRVSHLIRTIKEAES 337 G+ S + L+ +L + KE A KE ++KLT+EN L +V L R E +S Sbjct: 660 GTVNNSIEMLAKLEEELKSCKKELDASKELSKKLTMENNLLDQKVQRLERAKSEEKS 716
>AY224541:Os03g0288600 | Length = 436 Score = 30.0 bits (66), Expect = 1.3 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 2/46 (4%) Frame = +2 Query: 173 SEASSSAMRDLQSKLDAATKECLAEKEQNRKLTVENEKL--QYRVS 304 S+ ++A++D+ KLD EC+A+ E+N L + + L QY ++ Sbjct: 220 SDKFNNAIKDVSVKLDEQKNECIAQLEENNLLRSKLKDLADQYNIT 265
>AK101532:Os03g0288600 | Length = 436 Score = 30.0 bits (66), Expect = 1.3 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 2/46 (4%) Frame = +2 Query: 173 SEASSSAMRDLQSKLDAATKECLAEKEQNRKLTVENEKL--QYRVS 304 S+ ++A++D+ KLD EC+A+ E+N L + + L QY ++ Sbjct: 220 SDKFNNAIKDVSVKLDEQKNECIAQLEENNLLRSKLKDLADQYNIT 265
>AK065540:Os03g0288600 | Length = 410 Score = 30.0 bits (66), Expect = 1.3 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 2/46 (4%) Frame = +2 Query: 173 SEASSSAMRDLQSKLDAATKECLAEKEQNRKLTVENEKL--QYRVS 304 S+ ++A++D+ KLD EC+A+ E+N L + + L QY ++ Sbjct: 194 SDKFNNAIKDVSVKLDEQKNECIAQLEENNLLRSKLKDLADQYNIT 239
>Os10g0194300:Os10g0194300 | Length = 862 Score = 29.3 bits (64), Expect = 2.3 Identities = 14/42 (33%), Positives = 26/42 (61%) Frame = +2 Query: 164 DGSSEASSSAMRDLQSKLDAATKECLAEKEQNRKLTVENEKL 289 D ++ASSS++ L+ +++AA K C A K++ L + + L Sbjct: 821 DAKNQASSSSIFSLEKEVEAAEKYCQAMKDEVVALKMNHSNL 862 Score = 28.9 bits (63), Expect = 3.0 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = +2 Query: 218 DAATKECLAEKEQNRKLTVENEKLQYRVSHLIRTIKEAESR 340 DA+ CL +K Q E E+L + V HLI +KE +SR Sbjct: 741 DASEIVCLMKKAQ------ELEQLGFNVKHLIARLKEPQSR 775
>AK068903:Os09g0420200 | Length = 202 Score = 29.3 bits (64), Expect = 2.3 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = -2 Query: 413 SPPPRLSHRDNRISFARSSLSEASTLTPPL*LFG 312 SPPP + D+ + F R + EAST+ L LFG Sbjct: 1 SPPPISVYADDAVLFFRPTAGEASTIKRLLTLFG 34
>Os07g0154400:Os07g0154400 | Length = 1549 Score = 27.7 bits (60), Expect = 6.6 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +2 Query: 23 PSPPESIPRARTATMSAGPEEA 88 PSPP PRA AT +A P++A Sbjct: 109 PSPPNPPPRAPRATRTATPDDA 130
>AK110371: | Length = 393 Score = 27.7 bits (60), Expect = 6.6 Identities = 12/48 (25%), Positives = 28/48 (58%) Frame = +2 Query: 197 RDLQSKLDAATKECLAEKEQNRKLTVENEKLQYRVSHLIRTIKEAESR 340 R+ ++ D A ++C +++N++L EN++L+ + L + E + R Sbjct: 267 REKEAIADMAERKCRTLEDENQRLREENDRLRDELRFLRSELTERKER 314
>AK071891:Os04g0648500 | Length = 544 Score = 27.3 bits (59), Expect = 8.6 Identities = 18/56 (32%), Positives = 26/56 (46%) Frame = +2 Query: 173 SEASSSAMRDLQSKLDAATKECLAEKEQNRKLTVENEKLQYRVSHLIRTIKEAESR 340 S+A A+ D ++ + + EK +KL NEKL RT+KE E R Sbjct: 421 SDAVDKAVNDKSKEIQQKIENAMLEK---KKLADMNEKLTKNQDIWRRTLKEIEER 473
>AK064227:Os04g0648500 | Length = 544 Score = 27.3 bits (59), Expect = 8.6 Identities = 18/56 (32%), Positives = 26/56 (46%) Frame = +2 Query: 173 SEASSSAMRDLQSKLDAATKECLAEKEQNRKLTVENEKLQYRVSHLIRTIKEAESR 340 S+A A+ D ++ + + EK +KL NEKL RT+KE E R Sbjct: 421 SDAVDKAVNDKSKEIQQKIENAMLEK---KKLADMNEKLTKNQDIWRRTLKEIEER 473 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,521,715 Number of extensions: 304079 Number of successful extensions: 942 Number of sequences better than 10.0: 12 Number of HSP's gapped: 940 Number of HSP's successfully gapped: 13 Length of query: 211 Length of database: 15,399,855 Length adjustment: 96 Effective length of query: 115 Effective length of database: 11,555,919 Effective search space: 1328930685 Effective search space used: 1328930685 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
