>LOC_Os04g52270:12004.t04703:unspliced-genomic coatomer subunit epsilon, putative, expressed|
Length = 5001
Score = 115 bits (245), Expect(8) = e-138
Identities = 47/52 (90%), Positives = 49/52 (94%)
Frame = +2 / +3
Query: 368 KEGAISSLKEWLSDSAIGSNPVLRLIAGIIFMHEQDYNEALKHTHTGGTLDL 523
KE AI SLKEWLSDSA+GSNPVLRLIAGIIFMHEQDY EALKHTH+GGTLDL
Sbjct: 1440 KESAIVSLKEWLSDSAVGSNPVLRLIAGIIFMHEQDYTEALKHTHSGGTLDL 1595
Score = 114 bits (244), Expect(8) = e-138
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +2 / +1
Query: 137 DLLFNLRNLFYLGAYQSAINNSDVPGLDADAAAERDVIVFRSYIALGSYQL 289
DLLFNLRNLFYLGAYQ+AINNSDVPGLDADAAAERD IVFRSY+ALGSYQ+
Sbjct: 145 DLLFNLRNLFYLGAYQAAINNSDVPGLDADAAAERDAIVFRSYVALGSYQV 297
Score = 104 bits (221), Expect(8) = e-138
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = +2 / +2
Query: 524 HALNVQIFLKMHRSDYADKQLKIMQQTDEDHTLTQLANAWLDIAV 658
HALNVQIF+KMHRSDYA+KQLKIMQQ DEDHTLTQLANAWLDIAV
Sbjct: 2174 HALNVQIFIKMHRSDYAEKQLKIMQQIDEDHTLTQLANAWLDIAV 2308
Score = 100 bits (213), Expect(8) = e-138
Identities = 40/42 (95%), Positives = 40/42 (95%)
Frame = +2 / +3
Query: 650 IAVGGSKIREAYLIFQDFAEKYPMTGMVLNGKAVCCMHMGSF 775
I GGSKIREAYLIFQDFAEKYPMTGMVLNGKAVCCMHMGSF
Sbjct: 2427 IVQGGSKIREAYLIFQDFAEKYPMTGMVLNGKAVCCMHMGSF 2552
Score = 66.1 bits (138), Expect(8) = e-138
Identities = 29/32 (90%), Positives = 29/32 (90%)
Frame = +2 / +3
Query: 893 SQLKLSHPDHVLVKTTTSAEDNFERALQAVA* 988
SQLKLSHPDHVLVK SAEDNFERALQAVA*
Sbjct: 4461 SQLKLSHPDHVLVKRAVSAEDNFERALQAVA* 4556
Score = 63.8 bits (133), Expect(8) = e-138
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +2 / +3
Query: 815 DAKDPETLANLIVCNLHLGKPSSRY 889
DAKDPETLANLIVCNLHLGKPSSRY
Sbjct: 2742 DAKDPETLANLIVCNLHLGKPSSRY 2816
Score = 61.6 bits (128), Expect(8) = e-138
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +2 / +3
Query: 284 QLVISEIDSSAATSLQAVKLLALYLTGDK 370
QLVISEIDSSAATSLQAVKLLALYL+GDK
Sbjct: 396 QLVISEIDSSAATSLQAVKLLALYLSGDK 482
Score = 25.4 bits (49), Expect(8) = e-138
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2 / +3
Query: 1094 W*HTGLPTLYSKHPLYERI 1150
W*+T P LYS+ LY++I
Sbjct: 4677 W*YTTRPILYSEPLLYKQI 4733
Score = 115 bits (245), Expect(8) = e-107
Identities = 49/57 (85%), Positives = 52/57 (91%)
Frame = -1 / -3
Query: 816 SLFRASSNRVSASSKLPICIQQTALPLRTIPVIGYFSAKSWNMR*ASRILEPPTAIS 646
+LF ASS RVSASSKLP+CIQQTALP RTIPVIGYFSAKSWNMR*ASRILEPP I+
Sbjct: 2593 TLFNASSKRVSASSKLPMCIQQTALPFRTIPVIGYFSAKSWNMR*ASRILEPPCTIT 2423
Score = 106 bits (226), Expect(8) = e-107
Identities = 45/51 (88%), Positives = 47/51 (92%)
Frame = -1 / -3
Query: 522 RSRVPPVCVCLRASL*SCSCINIIPAINRRTGLLPMAESLNHSFKLEIAPS 370
RSRVPP CVCLRAS+*SCSCINIIPAINRRTGLLP AESLNHSF+L IA S
Sbjct: 1594 RSRVPPECVCLRASV*SCSCINIIPAINRRTGLLPTAESLNHSFRLTIALS 1442
Score = 65.7 bits (137), Expect(8) = e-107
Identities = 28/38 (73%), Positives = 29/38 (76%)
Frame = -1 / -3
Query: 987 QATAWSALSKLSSADVVVLTST*SGCDSFSWLKYRDDG 874
QATAW ALSKLSSAD TST*SGCDSFSWL+ G
Sbjct: 4555 QATAWRALSKLSSADTARFTST*SGCDSFSWLQMEKKG 4442
Score = 64.3 bits (134), Expect(8) = e-107
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -1 / -3
Query: 897 WLKYRDDGLPRWRLHTIRLARVSGSFAS 814
+L+Y DDGLPRWRLHTIRLARVSGSFAS
Sbjct: 2824 YLRYLDDGLPRWRLHTIRLARVSGSFAS 2741
Score = 62.0 bits (129), Expect(8) = e-107
Identities = 28/45 (62%), Positives = 31/45 (68%)
Frame = -1 / -1
Query: 657 TAISSQAFAXXXXXXXXXXXCMIFSCLSA*SERCILRKIWTFSAC 523
TA+SS AFA CMIF+C SA*SERCIL KIWTF+AC
Sbjct: 2307 TAMSSHAFASCVSVWSSSICCMIFNCFSA*SERCILMKIWTFNAC 2173
Score = 53.3 bits (110), Expect(8) = e-107
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -3 / -1
Query: 286 LVGSEGDVGAEDDDVALGRGVGVEARD 206
LVG+E DVGAEDD VALG GVGVEARD
Sbjct: 294 LVGAERDVGAEDDGVALGGGVGVEARD 214
Score = 52.4 bits (108), Expect(8) = e-107
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = -1 / -3
Query: 372 SLSPVR*SASSLTACSDVAADESISLITS 286
+LSP R SASS TACSDVAADESISLIT+
Sbjct: 484 TLSPERYSASSFTACSDVAADESISLITN 398
Score = 26.7 bits (52), Expect(8) = e-107
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3 / -2
Query: 1153 IYPFIQRMF*VQGWQTSVLPY 1091
+Y FIQ+ F VQ W S+ P+
Sbjct: 4736 LYLFIQQGFRVQDWPGSISPF 4674
Score = 90.0 bits (190), Expect(9) = 1e-74
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = -3 / -2
Query: 790 SFSLLKAPHMHTANCLAIKNHSCHRVLLSKVLEYEISFPDLRAANSD 650
S SL+KAPH+HTANCLAI NHSCHRV SKVLEYE+SF DLRA D
Sbjct: 2567 SLSLIKAPHVHTANCLAI*NHSCHRVFFSKVLEYEVSFTDLRATLHD 2427
Score = 86.3 bits (182), Expect(9) = 1e-74
Identities = 40/52 (76%), Positives = 42/52 (80%)
Frame = -3 / -2
Query: 523 QVQSSPSMCVLESLVVVLLMHKYNSSNQSQNRIASYG*ITQPFLQAGDRTFL 368
QVQSS +CVLES VVLLMHKYNSSNQS NRIAS ITQPFLQ +RTFL
Sbjct: 1595 QVQSSTRVCVLESFSVVLLMHKYNSSNQS*NRIASNRRITQPFLQTDNRTFL 1440
Score = 50.6 bits (104), Expect(9) = 1e-74
Identities = 24/39 (61%), Positives = 26/39 (66%)
Frame = -1 / -2
Query: 288 SW*DPRAM*ERKTMTXXXXXXXXXRPGTSLLLMADW*AP 172
+W*+P A *ERKTM RPGTSLLLMA W*AP
Sbjct: 296 TW*EPSAT*ERKTMASRSAAASASRPGTSLLLMAAW*AP 180
Score = 49.6 bits (102), Expect(9) = 1e-74
Identities = 25/40 (62%), Positives = 26/40 (65%)
Frame = -3 / -2
Query: 379 RTFLVSGEVEREQLDGLQXXXXXRVDLADHQLVGSEGDVG 260
R LVSGEV+REQL GLQ RVDLADHQL G G
Sbjct: 491 RANLVSGEVQREQLHGLQRRRRGRVDLADHQLQQPHGGRG 372
Score = 48.7 bits (100), Expect(9) = 1e-74
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -3 / -2
Query: 892 EVSGRRFAKVEITYNKIGKSFRILCVL 812
EVS RFAKVEIT+NKI KSFRI C+L
Sbjct: 2819 EVS**RFAKVEITHNKISKSFRIFCIL 2739
Score = 40.9 bits (83), Expect(9) = 1e-74
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -2 / -2
Query: 659 QQRYQAKHLLVVSVYGPRQFVA*SSVACQHNL 564
QQ+ A L VVSVYGP Q VA*S +A +H+L
Sbjct: 2309 QQQCPAMRLQVVSVYGPHQSVA*SLIASRHSL 2214
Score = 35.0 bits (70), Expect(9) = 1e-74
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3 / -3
Query: 571 II*AVHLKEDLDVQCMQV 518
I+* VHL EDLD+QCM V
Sbjct: 2221 IV*TVHLNEDLDIQCMPV 2168
Score = 26.3 bits (51), Expect(9) = 1e-74
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1 / -3
Query: 1152 YIRSYSGCFEYRVGRPVCYHIEQ 1084
YI YS EY++GR V +H+ +
Sbjct: 4735 YICLYSRGSEYKIGRVVYHHLSK 4667
Score = 24.9 bits (48), Expect(9) = 1e-74
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = -3 / -2
Query: 988 SGDSLERPFEVILRRRGGLN*HVIRVRQLQLA 893
S D LE EVI G L *H+I V QLA
Sbjct: 4556 SSDGLESSLEVIFC*YGTLY*HMIGV**FQLA 4461
Score = 97.3 bits (206), Expect(5) = 8e-58
Identities = 39/52 (75%), Positives = 41/52 (78%)
Frame = +1 / +2
Query: 367 QGRCDLQLEGMVE*FSHRKQSCSAIDCWNYIYA*ARLQRGSQAHTYWGNSGP 522
+G+CD Q EGMVE*F KQSCS IDCWNYIYA*ARL SQAHT W NSGP
Sbjct: 1439 EGKCDCQSEGMVE*FGGWKQSCSTIDCWNYIYA*ARLH*SSQAHTLWWNSGP 1594
Score = 84.5 bits (178), Expect(5) = 8e-58
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = +3 / +1
Query: 648 ISLLAALRSGKLISYSRTLLRSTL*QEWFLMARQFAVCIWGALRRLKLYCLKP*TR 815
+S ALRS KL SYS+TLL++T *QEWF MARQFAVC WGAL RL+L+ K *TR
Sbjct: 2425 LSCRVALRSVKLTSYSKTLLKNTR*QEWF*MARQFAVCTWGALMRLRLFYSKH*TR 2592
Score = 57.4 bits (119), Expect(5) = 8e-58
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1 / +2
Query: 289 GDQRDRLVGGDVAAGRQAARALPHRRQG 372
GDQRDRLV GDVAAGR+AARA+P RRQG
Sbjct: 401 GDQRDRLVRGDVAAGREAARAVPLRRQG 484
Score = 48.3 bits (99), Expect(5) = 8e-58
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +1 / +2
Query: 814 GRKGS*NSCQSYCM*SPPWQTVVPILQ 894
G K S*NSC SYC+*SPPWQTV+ I Q
Sbjct: 2741 GCKRS*NSC*SYCV*SPPWQTVIKIPQ 2821
Score = 29.9 bits (59), Expect(5) = 8e-58
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1 / +2
Query: 889 LQPAEAVAP*SRAS*DHHVGGG*LRKGAPSCRL 987
LQPAE + P S AS + *LR+ +PS RL
Sbjct: 4457 LQPAETITPRSCASKACRISRR*LRESSPSRRL 4555
Score = 88.6 bits (187), Expect(4) = 2e-38
Identities = 41/52 (78%), Positives = 43/52 (82%)
Frame = +3 / +1
Query: 369 RKVRSPA*RNG*VIQP*EAILFCD*LLELYLCMSKTTTRLSSTHILGELWTC 524
RKVR *RNG*VI+ EAILF D*LLELYLCMSKTT +LSSTH L ELWTC
Sbjct: 1441 RKVRLSV*RNG*VIRRLEAILFYD*LLELYLCMSKTTLKLSSTHTLVELWTC 1596
Score = 71.6 bits (150), Expect(4) = 2e-38
Identities = 35/60 (58%), Positives = 38/60 (63%)
Frame = +3 / +3
Query: 519 TCMH*TSRSSLRCTAQIMLTSN*RSCNKLTRTIH*HN*QMLGLISLLAALRSGKLISYSR 698
T MH* SRSSLRCT Q M SN*RSCN+L RTIH*HN Q G LL L + Y +
Sbjct: 2169 TGMH*MSRSSLRCTVQTMPRSN*RSCNRLMRTIH*HNLQTHGWTLLL*VL*QSNFVEYRK 2348
Score = 44.1 bits (90), Expect(4) = 2e-38
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +3 / +1
Query: 813 RTQRILKLLPILLYVISTLANRRPDTSAS 899
R Q+ILKLL ILL VISTLANR DTS +
Sbjct: 2740 RMQKILKLLLILLCVISTLANRHQDTSGT 2826
Score = 25.8 bits (50), Expect(4) = 2e-38
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3 / +1
Query: 888 TSAS*SCRTLITC*LRPPRRRRITSKGRSKLSPE 989
++AS*+ T I C* P +++ITS+ SK S E
Sbjct: 4456 SAAS*NYHTPIMC**SVPYQQKITSRELSKPSLE 4557
Score = 84.9 bits (179), Expect(3) = 3e-37
Identities = 38/50 (76%), Positives = 40/50 (80%)
Frame = -2 / -1
Query: 518 PEFPQYVCA*EPRCSLAHA*I*FQQSIAEQDCFLWLNHSTIPSSWRSHLP 369
PEF Q VCA*E +CSLAHA*I*FQQSI EQDCF NHSTIPS +SH P
Sbjct: 1590 PEFHQSVCA*ELQCSLAHA*I*FQQSIVEQDCFQPPNHSTIPSD*QSHFP 1441
Score = 75.8 bits (159), Expect(3) = 3e-37
Identities = 37/55 (67%), Positives = 38/55 (69%)
Frame = -2 / -1
Query: 815 PCLGLQAIEFQPPQSSPYAYSKLPCH*EPFLS*GTSQQSPGI*DKLPGS*SRQQR 651
PC L+ E QP QSSP AYSKLPCH EPFLS G QQS GI* KL GS*S R
Sbjct: 2592 PCSMLRVKESQPHQSSPCAYSKLPCHLEPFLSSGIFQQSLGI*GKLHGS*SHPAR 2428
Score = 44.1 bits (90), Expect(3) = 3e-37
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -2 / -1
Query: 878 TVCQGGDYIQ*DWQEFQDPLRP 813
TVCQGGDY Q*D QEFQD L P
Sbjct: 2805 TVCQGGDYTQ*D*QEFQDLLHP 2740
Score = 68.4 bits (143), Expect = 9e-11
Identities = 31/54 (57%), Positives = 38/54 (70%)
Frame = +1 / +1
Query: 523 ACTERPDLP*DAPLRLC*QATEDHATN*RGPYTDTTSKCLA*YRCWRL*DPGSL 684
AC E PDL *DAP RLC +A +DHAT+* GPYTDTT K +A + C + D +L
Sbjct: 2173 ACIECPDLH*DAPFRLCREAIKDHATD**GPYTDTTCKRMAGHCCCKYFDSPTL 2334
Score = 56.1 bits (116), Expect = 5e-07
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +1 / +2
Query: 649 YRCWRL*DPGSLSHIPGLC*EVPYDRNGS*WQGS 750
YR L*DP SL HIP LC*++P DRNGS WQGS
Sbjct: 2426 YRAGWL*DP*SLPHIPRLC*KIPDDRNGSKWQGS 2527
>LOC_Os04g55200:12004.t04993:unspliced-genomic coatomer subunit epsilon, putative|
Length = 2055
Score = 87.2 bits (184), Expect(7) = 1e-78
Identities = 34/46 (73%), Positives = 42/46 (91%)
Frame = +2 / +2
Query: 527 ALNVQIFLKMHRSDYADKQLKIMQQTDEDHTLTQLANAWLDIAVGG 664
A+NVQI L+MHRSD+A+KQL+IMQQ DEDHTLTQLANAW+D+ + G
Sbjct: 1193 AMNVQICLQMHRSDHAEKQLRIMQQLDEDHTLTQLANAWVDLVMVG 1330
Score = 84.0 bits (177), Expect(7) = 1e-78
Identities = 32/52 (61%), Positives = 42/52 (80%)
Frame = +2 / +2
Query: 368 KEGAISSLKEWLSDSAIGSNPVLRLIAGIIFMHEQDYNEALKHTHTGGTLDL 523
KE AI L E L+D A+GSNP+LRL+AG + MHE+DY ALKHT++GGT++L
Sbjct: 818 KESAIRKLNELLADDAVGSNPILRLVAGTVLMHERDYAGALKHTNSGGTMEL 973
Score = 75.3 bits (158), Expect(7) = 1e-78
Identities = 28/39 (71%), Positives = 35/39 (89%)
Frame = +2 / +3
Query: 659 GGSKIREAYLIFQDFAEKYPMTGMVLNGKAVCCMHMGSF 775
GGSKI+EA+LIFQD +EKYP T ++LNGKA+C MHMG+F
Sbjct: 1434 GGSKIQEAHLIFQDLSEKYPATCLILNGKALCLMHMGNF 1550
Score = 57.4 bits (119), Expect(7) = 1e-78
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +2 / +1
Query: 860 LHLGKPSSRYFSQLKLSHPDHVLVKTTTSAEDNFERALQAVA* 988
L+L S SQLKL+HPDH+LVK +SAED+F+RA QA++*
Sbjct: 1927 LNLNCNSDNRCSQLKLAHPDHMLVKRMSSAEDSFDRACQAIS* 2055
Score = 42.8 bits (87), Expect(7) = 1e-78
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +2 / +1
Query: 284 QLVISEIDSSAATSLQAVKLLALYLTGDKEGAIS 385
QLVI EI AAT LQAV+LL +YL+G G ++
Sbjct: 616 QLVIDEIGPGAATPLQAVRLLTVYLSGGAGGKVT 717
Score = 39.6 bits (80), Expect(7) = 1e-78
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +2 / +1
Query: 215 LDADAAAERDVIVFRSYIALGSYQL 289
L DA AERD +++RSYIA+GS+Q+
Sbjct: 112 LSPDALAERDSLLYRSYIAIGSHQV 186
Score = 33.6 bits (67), Expect(7) = 1e-78
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2 / +1
Query: 137 DLLFNLRNLFYLGAYQSAI 193
D LF LRN FY+GAYQ+ I
Sbjct: 22 DHLFGLRNSFYVGAYQAVI 78
Score = 76.7 bits (161), Expect(7) = 1e-52
Identities = 34/53 (64%), Positives = 40/53 (75%)
Frame = -1 / -3
Query: 816 SLFRASSNRVSASSKLPICIQQTALPLRTIPVIGYFSAKSWNMR*ASRILEPP 658
+LF SS+ SASSKLP+CI+ +ALPLR V GYFS KSW MR AS IL+PP
Sbjct: 1591 TLFSDSSSNPSASSKLPMCIRHSALPLRIKQVAGYFSDKSWKMRCASWILDPP 1433
Score = 55.6 bits (115), Expect(7) = 1e-52
Identities = 27/51 (52%), Positives = 30/51 (58%)
Frame = -1 / -1
Query: 519 SRVPPVCVCLRASL*SCSCINIIPAINRRTGLLPMAESLNHSFKLEIAPSL 367
S VPP VC A *S SC+ +PA +RR GLLP A S SF IA SL
Sbjct: 969 SIVPPEFVCFSAPA*SRSCMRTVPATSRRIGLLPTASSARSSFSFLIADSL 817
Score = 49.6 bits (102), Expect(7) = 1e-52
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = -1 / -2
Query: 978 AWSALSKLSSADVVVLTST*SGCDSFSWLK 889
AW ALSKLSSA+ + LTS SGC SFSWL+
Sbjct: 2045 AWQALSKLSSAEDIRLTSIWSGCASFSWLQ 1956
Score = 40.0 bits (81), Expect(7) = 1e-52
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = -1 / -2
Query: 900 SWLKYRDDGLPRWRLHTIRLARVSGSFAS 814
++ + RD PR+RLHT RLARVS S AS
Sbjct: 1805 TYFR*RDADFPRFRLHTTRLARVSASLAS 1719
Score = 39.6 bits (80), Expect(7) = 1e-52
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -3 / -1
Query: 286 LVGSEGDVGAEDDDVALGRGVGVE 215
LVG++GDVGA ++ VALG GVG E
Sbjct: 183 LVGADGDVGAVEEGVALGEGVGGE 112
Score = 35.0 bits (70), Expect(7) = 1e-52
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -3 / -1
Query: 364 SGEVEREQLDGLQXXXXXRVDLADHQL 284
+GE+ REQ DGL+ R DL DHQL
Sbjct: 696 AGEIHREQPDGLERRGRARPDLVDHQL 616
Score = 34.1 bits (68), Expect(7) = 1e-52
Identities = 20/46 (43%), Positives = 23/46 (50%)
Frame = -1 / -1
Query: 663 PPTAISSQAFAXXXXXXXXXXXCMIFSCLSA*SERCILRKIWTFSA 526
P S+ AFA C+I SC SA*S+ CI R I TF A
Sbjct: 1329 PTMTRSTHAFASCVSVWSSSNCCIILSCFSA*SDLCIWRHI*TFIA 1192
Score = 49.6 bits (102), Expect(5) = 2e-17
Identities = 19/26 (73%), Positives = 24/26 (92%)
Frame = +2 / +1
Query: 812 KDAKDPETLANLIVCNLHLGKPSSRY 889
+DAKD ETLANL+VC+L+LGK +SRY
Sbjct: 1717 QDAKDAETLANLVVCSLNLGKSASRY 1794
Score = 35.4 bits (71), Expect(5) = 2e-17
Identities = 22/53 (41%), Positives = 26/53 (49%)
Frame = +3 / +1
Query: 660 AALRSGKLISYSRTLLRSTL*QEWFLMARQFAVCIWGALRRLKLYCLKP*TRT 818
A RS K S SRT RST FLM + A C W L+ + C *TR+
Sbjct: 1435 AGPRSKKRTSSSRTCQRSTQQLA*FLMVKHCA*CTWVTLKMQRDCCWNH*TRS 1593
Score = 33.1 bits (66), Expect(5) = 2e-17
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1 / +3
Query: 286 AGDQRDRLVGGDVAAGRQAARALPHRRQGR 375
AGD+RDR G A GRQ A + RR+ R
Sbjct: 618 AGDRRDRAGRGHAAPGRQVAHGVSLRRRRR 707
Score = 29.9 bits (59), Expect(5) = 2e-17
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1 / +1
Query: 523 ACTERPDLP*DAPLRLC*QATEDHATN*RGPYTDTTSK 636
AC E D+P DA + + ED+A R P+TD K
Sbjct: 1189 ACDECSDMPPDAQV*SRRETAEDNAAIGRRPHTDAARK 1302
Score = 24.0 bits (46), Expect(5) = 2e-17
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1 / +1
Query: 421 KQSCSAIDCWNYIYA*ARLQRGSQAHTYWGNSG 519
+Q S C + +A A L R ++AH +W + G
Sbjct: 871 EQPDSPAGCRDGSHARAGLCRSTEAHKFWWDYG 969
Score = 45.1 bits (92), Expect(3) = 9e-13
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = -3 / -3
Query: 526 MQVQSSPSMCVLESLVVVLLMHKYNSSNQSQNRIASYG*ITQPFLQAGDRTFLVSGEVE 350
+Q S +CVL+ +V L+H+ NQ +NR+A + I Q +Q DR FL E++
Sbjct: 976 LQFHSPTRICVLQCSGIVPLVHENRPCNQPENRVAPHRIICQELVQLPDRGFLNYTEID 800
Score = 44.6 bits (91), Expect(3) = 9e-13
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = -3 / -2
Query: 802 FKQ*SFSLLKAPHMHTANCLAIKNHSCHRVLLSKVLEYEISFPDLRAA 659
F+Q S + K H+H A C IKN + VLL +VLE E+ F DL A
Sbjct: 1577 FQQQSLCIFKVTHVHQAQCFTIKN*ASCWVLL*QVLEDEVRFLDLGPA 1434
Score = 29.0 bits (57), Expect(3) = 9e-13
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = -1 / -2
Query: 375 PSLSPVR*SASSLTACSDVAADESISLITS 286
P P R + S+LTA S VAA IS ITS
Sbjct: 707 PPAPPERYTVSNLTAWSGVAAPGPISSITS 618
>LOC_Os07g40780:12007.t03737:unspliced-genomic zinc finger, C2H2 type family protein, expressed|
Length = 1272
Score = 30.9 bits (61), Expect(2) = 8.0
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +3 / +2
Query: 873 NRRPDTSAS*SCRTLITC*LRPPRRRRITSKGRSK 977
NRR SAS* R C R RRRR S+ R +
Sbjct: 563 NRRTSRSAS*CSRATPACGARRSRRRRSRSRSRRR 667
Score = 22.1 bits (42), Expect(2) = 8.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1 / +1
Query: 76 RRRRTHPVAGSAPTP 120
RRRR+ VA AP P
Sbjct: 478 RRRRSMRVAAPAPAP 522
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 433,220,793
Number of extensions: 7044919
Number of successful extensions: 33771
Number of sequences better than 10.0: 32
Length of query: 401
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 351
Effective length of database: 52,799,986
Effective search space: 18532795086
Effective search space used: 18532795086
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)