ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf87n21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001060382.1| Oryza sativa (japonica cultivar-group) Os04g0612600 (Os04g0612600) mRNA, complete cds Length = 1262 Score = 973 bits (491), Expect = 0.0 Identities = 722/799 (90%) Strand = Plus / Plus Query: 132 cccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccagtccgcca 191 |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 138 ccccggacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccaggccgcca 197 Query: 192 tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 251 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 198 tcaacaacagcgacgtcccgggcctcgacgccgacgccgccgccgagcgcgacgccatcg 257 Query: 252 tcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgagatcgactcgt 311 |||||||||||||| |||| ||||| ||||||||| |||||||||||||||||||||||| Sbjct: 258 tcttccgctcctacgtcgcgctcggctcctaccagttggtgatcagcgagatcgactcgt 317 Query: 312 cggcggcgacgtcgctgcaggccgtcaagctgctcgcgctctacctcaccggagacaagg 371 | ||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||| Sbjct: 318 ccgcggcgacgtcgctgcaggccgtgaagctgctcgcgctgtacctctccggagacaagg 377 Query: 372 aaggtgcgatctccagcttgaaggaatggttgagtgattcagccataggaagcaatcctg 431 || ||||||| ||| |||||||||||||||||||||| || | ||||||||||||| Sbjct: 378 aaagtgcgattgtcagtctgaaggaatggttgagtgattcggcggttggaagcaatcctg 437 Query: 432 ttctgcgattgattgctggaattatatttatgcatgagcaagactacaacgaggctctca 491 |||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 438 ttctacgattgattgctggaattatatttatgcatgagcaagactacactgaagctctca 497 Query: 492 agcacacacatactgggggaactctggacctgcatgcactgaacgtccagatcttcctta 551 |||||||||| |||| ||||||||||||||||||||| |||| |||||||||||| ||| Sbjct: 498 agcacacacactctggtggaactctggacctgcatgcattgaatgtccagatcttcatta 557 Query: 552 agatgcaccgctcagattatgctgacaagcaactgaagatcatgcaacaaactgacgagg 611 |||||||||| ||||| ||||| || |||||| | |||||||||||||| | ||| |||| Sbjct: 558 agatgcaccgttcagactatgccgagaagcaattaaagatcatgcaacagattgatgagg 617 Query: 612 accatacactgacacaactagcaaatgcttggcttgatatcgctgttggcggctctaaga 671 ||||||||||||||||||| ||||| || ||||| || || |||||||| |||||||||| Sbjct: 618 accatacactgacacaacttgcaaacgcatggctggacattgctgttggtggctctaaga 677 Query: 672 tccgggaagcttatctcatattccaggactttgctgagaagtaccctatgacaggaatgg 731 |||| |||||||| ||||||||||| ||||||||||| || ||||| ||||||||||||| Sbjct: 678 tccgtgaagcttacctcatattccaagactttgctgaaaaatacccgatgacaggaatgg 737 Query: 732 ttcttaatggcaaggcagtttgctgtatgcatatggggagctttgaggaggctgaaactc 791 |||| |||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 738 ttctaaatggcaaggcagtttgctgtatgcacatggggagctttgatgaggctgagactc 797 Query: 792 tattgcttgaagccctaaacaaggacgcaaaggatcctgaaactcttgccaatcttattg 851 | || || ||||| | |||||||| ||||| ||||||||||||||||| |||||||||| Sbjct: 798 ttttactcgaagcattgaacaaggatgcaaaagatcctgaaactcttgctaatcttattg 857 Query: 852 tatgtaatctccaccttggcaaaccgtcgtcccgatacttcagccagctgaagctgtcgc 911 | |||||||||||||||||||||||||| || ||||| ||||||||||||| || || | Sbjct: 858 tgtgtaatctccaccttggcaaaccgtcatcaagatacctcagccagctgaaactatcac 917 Query: 912 accctgatcacgtgctagt 930 |||| ||||| |||||||| Sbjct: 918 accccgatcatgtgctagt 936
>dbj|AK104427.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-A04, full insert sequence Length = 1207 Score = 973 bits (491), Expect = 0.0 Identities = 722/799 (90%) Strand = Plus / Plus Query: 132 cccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccagtccgcca 191 |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 140 ccccggacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccaggccgcca 199 Query: 192 tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 251 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 200 tcaacaacagcgacgtcccgggcctcgacgccgacgccgccgccgagcgcgacgccatcg 259 Query: 252 tcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgagatcgactcgt 311 |||||||||||||| |||| ||||| ||||||||| |||||||||||||||||||||||| Sbjct: 260 tcttccgctcctacgtcgcgctcggctcctaccagttggtgatcagcgagatcgactcgt 319 Query: 312 cggcggcgacgtcgctgcaggccgtcaagctgctcgcgctctacctcaccggagacaagg 371 | ||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||| Sbjct: 320 ccgcggcgacgtcgctgcaggccgtgaagctgctcgcgctgtacctctccggagacaagg 379 Query: 372 aaggtgcgatctccagcttgaaggaatggttgagtgattcagccataggaagcaatcctg 431 || ||||||| ||| |||||||||||||||||||||| || | ||||||||||||| Sbjct: 380 aaagtgcgattgtcagtctgaaggaatggttgagtgattcggcggttggaagcaatcctg 439 Query: 432 ttctgcgattgattgctggaattatatttatgcatgagcaagactacaacgaggctctca 491 |||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 440 ttctacgattgattgctggaattatatttatgcatgagcaagactacactgaagctctca 499 Query: 492 agcacacacatactgggggaactctggacctgcatgcactgaacgtccagatcttcctta 551 |||||||||| |||| ||||||||||||||||||||| |||| |||||||||||| ||| Sbjct: 500 agcacacacactctggtggaactctggacctgcatgcattgaatgtccagatcttcatta 559 Query: 552 agatgcaccgctcagattatgctgacaagcaactgaagatcatgcaacaaactgacgagg 611 |||||||||| ||||| ||||| || |||||| | |||||||||||||| | ||| |||| Sbjct: 560 agatgcaccgttcagactatgccgagaagcaattaaagatcatgcaacagattgatgagg 619 Query: 612 accatacactgacacaactagcaaatgcttggcttgatatcgctgttggcggctctaaga 671 ||||||||||||||||||| ||||| || ||||| || || |||||||| |||||||||| Sbjct: 620 accatacactgacacaacttgcaaacgcatggctggacattgctgttggtggctctaaga 679 Query: 672 tccgggaagcttatctcatattccaggactttgctgagaagtaccctatgacaggaatgg 731 |||| |||||||| ||||||||||| ||||||||||| || ||||| ||||||||||||| Sbjct: 680 tccgtgaagcttacctcatattccaagactttgctgaaaaatacccgatgacaggaatgg 739 Query: 732 ttcttaatggcaaggcagtttgctgtatgcatatggggagctttgaggaggctgaaactc 791 |||| |||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 740 ttctaaatggcaaggcagtttgctgtatgcacatggggagctttgatgaggctgagactc 799 Query: 792 tattgcttgaagccctaaacaaggacgcaaaggatcctgaaactcttgccaatcttattg 851 | || || ||||| | |||||||| ||||| ||||||||||||||||| |||||||||| Sbjct: 800 ttttactcgaagcattgaacaaggatgcaaaagatcctgaaactcttgctaatcttattg 859 Query: 852 tatgtaatctccaccttggcaaaccgtcgtcccgatacttcagccagctgaagctgtcgc 911 | |||||||||||||||||||||||||| || ||||| ||||||||||||| || || | Sbjct: 860 tgtgtaatctccaccttggcaaaccgtcatcaagatacctcagccagctgaaactatcac 919 Query: 912 accctgatcacgtgctagt 930 |||| ||||| |||||||| Sbjct: 920 accccgatcatgtgctagt 938
>dbj|AK099008.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120E14, full insert sequence Length = 1218 Score = 973 bits (491), Expect = 0.0 Identities = 722/799 (90%) Strand = Plus / Plus Query: 132 cccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccagtccgcca 191 |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 113 ccccggacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccaggccgcca 172 Query: 192 tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 251 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 173 tcaacaacagcgacgtcccgggcctcgacgccgacgccgccgccgagcgcgacgccatcg 232 Query: 252 tcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgagatcgactcgt 311 |||||||||||||| |||| ||||| ||||||||| |||||||||||||||||||||||| Sbjct: 233 tcttccgctcctacgtcgcgctcggctcctaccagttggtgatcagcgagatcgactcgt 292 Query: 312 cggcggcgacgtcgctgcaggccgtcaagctgctcgcgctctacctcaccggagacaagg 371 | ||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||| Sbjct: 293 ccgcggcgacgtcgctgcaggccgtgaagctgctcgcgctgtacctctccggagacaagg 352 Query: 372 aaggtgcgatctccagcttgaaggaatggttgagtgattcagccataggaagcaatcctg 431 || ||||||| ||| |||||||||||||||||||||| || | ||||||||||||| Sbjct: 353 aaagtgcgattgtcagtctgaaggaatggttgagtgattcggcggttggaagcaatcctg 412 Query: 432 ttctgcgattgattgctggaattatatttatgcatgagcaagactacaacgaggctctca 491 |||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 413 ttctacgattgattgctggaattatatttatgcatgagcaagactacactgaagctctca 472 Query: 492 agcacacacatactgggggaactctggacctgcatgcactgaacgtccagatcttcctta 551 |||||||||| |||| ||||||||||||||||||||| |||| |||||||||||| ||| Sbjct: 473 agcacacacactctggtggaactctggacctgcatgcattgaatgtccagatcttcatta 532 Query: 552 agatgcaccgctcagattatgctgacaagcaactgaagatcatgcaacaaactgacgagg 611 |||||||||| ||||| ||||| || |||||| | |||||||||||||| | ||| |||| Sbjct: 533 agatgcaccgttcagactatgccgagaagcaattaaagatcatgcaacagattgatgagg 592 Query: 612 accatacactgacacaactagcaaatgcttggcttgatatcgctgttggcggctctaaga 671 ||||||||||||||||||| ||||| || ||||| || || |||||||| |||||||||| Sbjct: 593 accatacactgacacaacttgcaaacgcatggctggacattgctgttggtggctctaaga 652 Query: 672 tccgggaagcttatctcatattccaggactttgctgagaagtaccctatgacaggaatgg 731 |||| |||||||| ||||||||||| ||||||||||| || ||||| ||||||||||||| Sbjct: 653 tccgtgaagcttacctcatattccaagactttgctgaaaaatacccgatgacaggaatgg 712 Query: 732 ttcttaatggcaaggcagtttgctgtatgcatatggggagctttgaggaggctgaaactc 791 |||| |||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 713 ttctaaatggcaaggcagtttgctgtatgcacatggggagctttgatgaggctgagactc 772 Query: 792 tattgcttgaagccctaaacaaggacgcaaaggatcctgaaactcttgccaatcttattg 851 | || || ||||| | |||||||| ||||| ||||||||||||||||| |||||||||| Sbjct: 773 ttttactcgaagcattgaacaaggatgcaaaagatcctgaaactcttgctaatcttattg 832 Query: 852 tatgtaatctccaccttggcaaaccgtcgtcccgatacttcagccagctgaagctgtcgc 911 | |||||||||||||||||||||||||| || ||||| ||||||||||||| || || | Sbjct: 833 tgtgtaatctccaccttggcaaaccgtcatcaagatacctcagccagctgaaactatcac 892 Query: 912 accctgatcacgtgctagt 930 |||| ||||| |||||||| Sbjct: 893 accccgatcatgtgctagt 911
>dbj|AK060707.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H03, full insert sequence Length = 1262 Score = 973 bits (491), Expect = 0.0 Identities = 722/799 (90%) Strand = Plus / Plus Query: 132 cccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccagtccgcca 191 |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 138 ccccggacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccaggccgcca 197 Query: 192 tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 251 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 198 tcaacaacagcgacgtcccgggcctcgacgccgacgccgccgccgagcgcgacgccatcg 257 Query: 252 tcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgagatcgactcgt 311 |||||||||||||| |||| ||||| ||||||||| |||||||||||||||||||||||| Sbjct: 258 tcttccgctcctacgtcgcgctcggctcctaccagttggtgatcagcgagatcgactcgt 317 Query: 312 cggcggcgacgtcgctgcaggccgtcaagctgctcgcgctctacctcaccggagacaagg 371 | ||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||| Sbjct: 318 ccgcggcgacgtcgctgcaggccgtgaagctgctcgcgctgtacctctccggagacaagg 377 Query: 372 aaggtgcgatctccagcttgaaggaatggttgagtgattcagccataggaagcaatcctg 431 || ||||||| ||| |||||||||||||||||||||| || | ||||||||||||| Sbjct: 378 aaagtgcgattgtcagtctgaaggaatggttgagtgattcggcggttggaagcaatcctg 437 Query: 432 ttctgcgattgattgctggaattatatttatgcatgagcaagactacaacgaggctctca 491 |||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 438 ttctacgattgattgctggaattatatttatgcatgagcaagactacactgaagctctca 497 Query: 492 agcacacacatactgggggaactctggacctgcatgcactgaacgtccagatcttcctta 551 |||||||||| |||| ||||||||||||||||||||| |||| |||||||||||| ||| Sbjct: 498 agcacacacactctggtggaactctggacctgcatgcattgaatgtccagatcttcatta 557 Query: 552 agatgcaccgctcagattatgctgacaagcaactgaagatcatgcaacaaactgacgagg 611 |||||||||| ||||| ||||| || |||||| | |||||||||||||| | ||| |||| Sbjct: 558 agatgcaccgttcagactatgccgagaagcaattaaagatcatgcaacagattgatgagg 617 Query: 612 accatacactgacacaactagcaaatgcttggcttgatatcgctgttggcggctctaaga 671 ||||||||||||||||||| ||||| || ||||| || || |||||||| |||||||||| Sbjct: 618 accatacactgacacaacttgcaaacgcatggctggacattgctgttggtggctctaaga 677 Query: 672 tccgggaagcttatctcatattccaggactttgctgagaagtaccctatgacaggaatgg 731 |||| |||||||| ||||||||||| ||||||||||| || ||||| ||||||||||||| Sbjct: 678 tccgtgaagcttacctcatattccaagactttgctgaaaaatacccgatgacaggaatgg 737 Query: 732 ttcttaatggcaaggcagtttgctgtatgcatatggggagctttgaggaggctgaaactc 791 |||| |||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 738 ttctaaatggcaaggcagtttgctgtatgcacatggggagctttgatgaggctgagactc 797 Query: 792 tattgcttgaagccctaaacaaggacgcaaaggatcctgaaactcttgccaatcttattg 851 | || || ||||| | |||||||| ||||| ||||||||||||||||| |||||||||| Sbjct: 798 ttttactcgaagcattgaacaaggatgcaaaagatcctgaaactcttgctaatcttattg 857 Query: 852 tatgtaatctccaccttggcaaaccgtcgtcccgatacttcagccagctgaagctgtcgc 911 | |||||||||||||||||||||||||| || ||||| ||||||||||||| || || | Sbjct: 858 tgtgtaatctccaccttggcaaaccgtcatcaagatacctcagccagctgaaactatcac 917 Query: 912 accctgatcacgtgctagt 930 |||| ||||| |||||||| Sbjct: 918 accccgatcatgtgctagt 936
>dbj|AB042115.1| Oryza sativa (japonica cultivar-group) cope1 mRNA for epsilon1-COP, complete cds Length = 1207 Score = 973 bits (491), Expect = 0.0 Identities = 722/799 (90%) Strand = Plus / Plus Query: 132 cccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccagtccgcca 191 |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 130 ccccggacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccaggccgcca 189 Query: 192 tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 251 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 190 tcaacaacagcgacgtcccgggcctcgacgccgacgccgccgccgagcgcgacgccatcg 249 Query: 252 tcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgagatcgactcgt 311 |||||||||||||| |||| ||||| ||||||||| |||||||||||||||||||||||| Sbjct: 250 tcttccgctcctacgtcgcgctcggctcctaccagttggtgatcagcgagatcgactcgt 309 Query: 312 cggcggcgacgtcgctgcaggccgtcaagctgctcgcgctctacctcaccggagacaagg 371 | ||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||| Sbjct: 310 ccgcggcgacgtcgctgcaggccgtgaagctgctcgcgctgtacctctccggagacaagg 369 Query: 372 aaggtgcgatctccagcttgaaggaatggttgagtgattcagccataggaagcaatcctg 431 || ||||||| ||| |||||||||||||||||||||| || | ||||||||||||| Sbjct: 370 aaagtgcgattgtcagtctgaaggaatggttgagtgattcggcggttggaagcaatcctg 429 Query: 432 ttctgcgattgattgctggaattatatttatgcatgagcaagactacaacgaggctctca 491 |||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 430 ttctacgattgattgctggaattatatttatgcatgagcaagactacactgaagctctca 489 Query: 492 agcacacacatactgggggaactctggacctgcatgcactgaacgtccagatcttcctta 551 |||||||||| |||| ||||||||||||||||||||| |||| |||||||||||| ||| Sbjct: 490 agcacacacactctggtggaactctggacctgcatgcattgaatgtccagatcttcatta 549 Query: 552 agatgcaccgctcagattatgctgacaagcaactgaagatcatgcaacaaactgacgagg 611 |||||||||| ||||| ||||| || |||||| | |||||||||||||| | ||| |||| Sbjct: 550 agatgcaccgttcagactatgccgagaagcaattaaagatcatgcaacagattgatgagg 609 Query: 612 accatacactgacacaactagcaaatgcttggcttgatatcgctgttggcggctctaaga 671 ||||||||||||||||||| ||||| || ||||| || || |||||||| |||||||||| Sbjct: 610 accatacactgacacaacttgcaaacgcatggctggacattgctgttggtggctctaaga 669 Query: 672 tccgggaagcttatctcatattccaggactttgctgagaagtaccctatgacaggaatgg 731 |||| |||||||| ||||||||||| ||||||||||| || ||||| ||||||||||||| Sbjct: 670 tccgtgaagcttacctcatattccaagactttgctgaaaaatacccgatgacaggaatgg 729 Query: 732 ttcttaatggcaaggcagtttgctgtatgcatatggggagctttgaggaggctgaaactc 791 |||| |||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 730 ttctaaatggcaaggcagtttgctgtatgcacatggggagctttgatgaggctgagactc 789 Query: 792 tattgcttgaagccctaaacaaggacgcaaaggatcctgaaactcttgccaatcttattg 851 | || || ||||| | |||||||| ||||| ||||||||||||||||| |||||||||| Sbjct: 790 ttttactcgaagcattgaacaaggatgcaaaagatcctgaaactcttgctaatcttattg 849 Query: 852 tatgtaatctccaccttggcaaaccgtcgtcccgatacttcagccagctgaagctgtcgc 911 | |||||||||||||||||||||||||| || ||||| ||||||||||||| || || | Sbjct: 850 tgtgtaatctccaccttggcaaaccgtcatcaagatacctcagccagctgaaactatcac 909 Query: 912 accctgatcacgtgctagt 930 |||| ||||| |||||||| Sbjct: 910 accccgatcatgtgctagt 928
>emb|CT830290.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA036E18, full insert sequence Length = 1264 Score = 950 bits (479), Expect = 0.0 Identities = 720/799 (90%), Gaps = 1/799 (0%) Strand = Plus / Plus Query: 132 cccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccagtccgcca 191 |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 137 ccccggacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccaggccgcca 196 Query: 192 tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 251 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 197 tcaacaacagcgacgtcccgggcctcgacgccgacgccgccgccgagcgcgacgccatcg 256 Query: 252 tcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgagatcgactcgt 311 |||||||||||||| |||| ||||| ||||||||| ||||| |||||||||||||||||| Sbjct: 257 tcttccgctcctacgtcgcgctcggctcctaccagttggtggtcagcgagatcgactcgt 316 Query: 312 cggcggcgacgtcgctgcaggccgtcaagctgctcgcgctctacctcaccggagacaagg 371 | ||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||| Sbjct: 317 ccgcggcgacgtcgctgcaggccgtgaagctgctcgcgctgtacctctccggagacaagg 376 Query: 372 aaggtgcgatctccagcttgaaggaatggttgagtgattcagccataggaagcaatcctg 431 || ||||||| ||| |||||||||||||||||||||| || | ||||||||||||| Sbjct: 377 aaagtgcgattgtcagtctgaaggaatggttgagtgattcggcggttggaagcaatcctg 436 Query: 432 ttctgcgattgattgctggaattatatttatgcatgagcaagactacaacgaggctctca 491 |||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 437 ttctacgattgattgctggaattatatttatgcatgagcaagactacactgaagctctca 496 Query: 492 agcacacacatactgggggaactctggacctgcatgcactgaacgtccagatcttcctta 551 |||||||||| |||| ||||||||||||||||||||| |||| |||||||||||| ||| Sbjct: 497 agcacacacactctggtggaactctggacctgcatgcattgaatgtccagatcttcatta 556 Query: 552 agatgcaccgctcagattatgctgacaagcaactgaagatcatgcaacaaactgacgagg 611 |||||||||| ||||| ||||| || |||| | | |||||||||||||| | ||| |||| Sbjct: 557 agatgcaccgttcagactatgccgagaagc-attaaagatcatgcaacagattgatgagg 615 Query: 612 accatacactgacacaactagcaaatgcttggcttgatatcgctgttggcggctctaaga 671 ||||||||||||||||||| ||||| || ||||| || || |||||||| |||||||||| Sbjct: 616 accatacactgacacaacttgcaaacgcatggctggacattgctgttggtggctctaaga 675 Query: 672 tccgggaagcttatctcatattccaggactttgctgagaagtaccctatgacaggaatgg 731 |||| |||||||| ||||||||||| ||||||||||| || ||||| ||||||||||||| Sbjct: 676 tccgtgaagcttacctcatattccaagactttgctgaaaaatacccgatgacaggaatgg 735 Query: 732 ttcttaatggcaaggcagtttgctgtatgcatatggggagctttgaggaggctgaaactc 791 |||| |||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 736 ttctaaatggcaaggcagtttgctgtatgcacatggggagctttgatgaggctgagactc 795 Query: 792 tattgcttgaagccctaaacaaggacgcaaaggatcctgaaactcttgccaatcttattg 851 | || || ||||| | |||||||| ||||| ||||||||||||||||| |||||||||| Sbjct: 796 ttttactcgaagcattgaacaaggatgcaaaagatcctgaaactcttgctaatcttattg 855 Query: 852 tatgtaatctccaccttggcaaaccgtcgtcccgatacttcagccagctgaagctgtcgc 911 | |||||||||||||||||||||||||| || ||||| ||||||||||||| || || | Sbjct: 856 tgtgtaatctccaccttggcaaaccgtcatcaagatacctcagccagctgaaactatcac 915 Query: 912 accctgatcacgtgctagt 930 |||| ||||| |||||||| Sbjct: 916 accccgatcatgtgctagt 934
>gb|AF216853.1|AF216853 Zea mays epsilon-COP mRNA, complete cds Length = 1180 Score = 948 bits (478), Expect = 0.0 Identities = 730/814 (89%) Strand = Plus / Plus Query: 122 gcgatggccacccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctac 181 ||||||||| |||||||||| |||||||| ||||| |||||||||||||| ||||||||| Sbjct: 101 gcgatggcctcccccgacctgctcttcaatctgcggaacctcttctacctgggcgcctac 160 Query: 182 cagtccgccatcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgc 241 ||| | |||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 161 caggcagccatcaacaacagcgacgtcccgggcctcgacgccgacgccgccgctgagcgc 220 Query: 242 gacgtcatcgtcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgag 301 |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 221 gacgccatcgtcttccgctcctacatcgccctcggctcctaccagctggtgatcagcgag 280 Query: 302 atcgactcgtcggcggcgacgtcgctgcaggccgtcaagctgctcgcgctctacctcacc 361 ||||||||||| || || || |||||||||||||| |||||||||||||| |||||||| Sbjct: 281 atcgactcgtcagccgctacctcgctgcaggccgtgaagctgctcgcgctgtacctcact 340 Query: 362 ggagacaaggaaggtgcgatctccagcttgaaggaatggttgagtgattcagccatagga 421 ||||||||||||||||| |||||||| | ||||||||||||||||||||||| || ||| Sbjct: 341 ggagacaaggaaggtgctatctccagtctcaaggaatggttgagtgattcagcaattgga 400 Query: 422 agcaatcctgttctgcgattgattgctggaattatatttatgcatgagcaagactacaac 481 ||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||| Sbjct: 401 agcaatcctgttctgcggttgattgctggaattgtatttatgcatgagcaggactacaat 460 Query: 482 gaggctctcaagcacacacatactgggggaactctggacctgcatgcactgaacgtccag 541 |||||||||||||||||||| |||| ||||||||||| |||||||| |||| |||||| Sbjct: 461 gaggctctcaagcacacacactctggaggaactctggatttgcatgcattgaatgtccag 520 Query: 542 atcttccttaagatgcaccgctcagattatgctgacaagcaactgaagatcatgcaacaa 601 |||||| | |||||||| || ||||| |||||||| |||||| ||||||||||||||||| Sbjct: 521 atcttcatcaagatgcatcgttcagactatgctgagaagcaattgaagatcatgcaacaa 580 Query: 602 actgacgaggaccatacactgacacaactagcaaatgcttggcttgatatcgctgttggc 661 | ||| || ||||||||||| |||||||| ||||| || ||||| | || |||||||| Sbjct: 581 attgatgaagaccatacacttacacaacttgcaaacgcatggctgggcattgctgttggt 640 Query: 662 ggctctaagatccgggaagcttatctcatattccaggactttgctgagaagtaccctatg 721 |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 641 ggctctaagatccgtgaagcttatctcatattccaagactttgctgaaaagtacccaatg 700 Query: 722 acaggaatggttcttaatggcaaggcagtttgctgtatgcatatggggagctttgaggag 781 ||||| |||||| | || || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 701 acagggatggttttaaacgggaaggcagtctgctgtatgcacatgggaagctttgaggag 760 Query: 782 gctgaaactctattgcttgaagccctaaacaaggacgcaaaggatcctgaaactcttgcc 841 ||||| ||||| ||||||||||| | |||||||||||||| ||||||||||||||||| Sbjct: 761 gctgagactctgttgcttgaagcgttgaacaaggacgcaaaagatcctgaaactcttgcg 820 Query: 842 aatcttattgtatgtaatctccaccttggcaaaccgtcgtcccgatacttcagccagctg 901 ||||| |||||||||||||||||| | |||||||| || || |||||| ||||||||||| Sbjct: 821 aatctaattgtatgtaatctccacttaggcaaaccatcatcacgatacctcagccagctg 880 Query: 902 aagctgtcgcaccctgatcacgtgctagttaaga 935 ||||| ||||| ||||| || ||||||||||||| Sbjct: 881 aagctatcgcatcctgaccatgtgctagttaaga 914
>gb|AY105373.1| Zea mays PCO148993 mRNA sequence Length = 1262 Score = 948 bits (478), Expect = 0.0 Identities = 730/814 (89%) Strand = Plus / Plus Query: 122 gcgatggccacccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctac 181 ||||||||| |||||||||| |||||||| ||||| |||||||||||||| ||||||||| Sbjct: 101 gcgatggcctcccccgacctgctcttcaatctgcggaacctcttctacctgggcgcctac 160 Query: 182 cagtccgccatcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgc 241 ||| | |||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 161 caggcagccatcaacaacagcgacgtcccgggcctcgacgccgacgccgccgctgagcgc 220 Query: 242 gacgtcatcgtcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgag 301 |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 221 gacgccatcgtcttccgctcctacatcgccctcggctcctaccagctggtgatcagcgag 280 Query: 302 atcgactcgtcggcggcgacgtcgctgcaggccgtcaagctgctcgcgctctacctcacc 361 ||||||||||| || || || |||||||||||||| |||||||||||||| |||||||| Sbjct: 281 atcgactcgtcagccgctacctcgctgcaggccgtgaagctgctcgcgctgtacctcact 340 Query: 362 ggagacaaggaaggtgcgatctccagcttgaaggaatggttgagtgattcagccatagga 421 ||||||||||||||||| |||||||| | ||||||||||||||||||||||| || ||| Sbjct: 341 ggagacaaggaaggtgctatctccagtctcaaggaatggttgagtgattcagcaattgga 400 Query: 422 agcaatcctgttctgcgattgattgctggaattatatttatgcatgagcaagactacaac 481 ||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||| Sbjct: 401 agcaatcctgttctgcggttgattgctggaattgtatttatgcatgagcaggactacaat 460 Query: 482 gaggctctcaagcacacacatactgggggaactctggacctgcatgcactgaacgtccag 541 |||||||||||||||||||| |||| ||||||||||| |||||||| |||| |||||| Sbjct: 461 gaggctctcaagcacacacactctggaggaactctggatttgcatgcattgaatgtccag 520 Query: 542 atcttccttaagatgcaccgctcagattatgctgacaagcaactgaagatcatgcaacaa 601 |||||| | |||||||| || ||||| |||||||| |||||| ||||||||||||||||| Sbjct: 521 atcttcatcaagatgcatcgttcagactatgctgagaagcaattgaagatcatgcaacaa 580 Query: 602 actgacgaggaccatacactgacacaactagcaaatgcttggcttgatatcgctgttggc 661 | ||| || ||||||||||| |||||||| ||||| || ||||| | || |||||||| Sbjct: 581 attgatgaagaccatacacttacacaacttgcaaacgcatggctgggcattgctgttggt 640 Query: 662 ggctctaagatccgggaagcttatctcatattccaggactttgctgagaagtaccctatg 721 |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 641 ggctctaagatccgtgaagcttatctcatattccaagactttgctgaaaagtacccaatg 700 Query: 722 acaggaatggttcttaatggcaaggcagtttgctgtatgcatatggggagctttgaggag 781 ||||| |||||| | || || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 701 acagggatggttttaaacgggaaggcagtctgctgtatgcacatgggaagctttgaggag 760 Query: 782 gctgaaactctattgcttgaagccctaaacaaggacgcaaaggatcctgaaactcttgcc 841 ||||| ||||| ||||||||||| | |||||||||||||| ||||||||||||||||| Sbjct: 761 gctgagactctgttgcttgaagcgttgaacaaggacgcaaaagatcctgaaactcttgcg 820 Query: 842 aatcttattgtatgtaatctccaccttggcaaaccgtcgtcccgatacttcagccagctg 901 ||||| |||||||||||||||||| | |||||||| || || |||||| ||||||||||| Sbjct: 821 aatctaattgtatgtaatctccacttaggcaaaccatcatcacgatacctcagccagctg 880 Query: 902 aagctgtcgcaccctgatcacgtgctagttaaga 935 ||||| ||||| ||||| || ||||||||||||| Sbjct: 881 aagctatcgcatcctgaccatgtgctagttaaga 914
>gb|BT016527.1| Zea mays clone Contig360 mRNA sequence Length = 1201 Score = 940 bits (474), Expect = 0.0 Identities = 729/814 (89%) Strand = Plus / Plus Query: 122 gcgatggccacccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctac 181 ||||||||| |||||||||| |||||||| ||||| |||||||||||||| ||||||||| Sbjct: 111 gcgatggcctcccccgacctgctcttcaatctgcggaacctcttctacctgggcgcctac 170 Query: 182 cagtccgccatcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgc 241 ||| | |||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 171 caggcagccatcaacaacagcgacgtcccgggcctcgacgccgacgccgccgctgagcgc 230 Query: 242 gacgtcatcgtcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgag 301 |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 231 gacgccatcgtcttccgctcctacatcgccctcggctcctaccagctggtgatcagcgag 290 Query: 302 atcgactcgtcggcggcgacgtcgctgcaggccgtcaagctgctcgcgctctacctcacc 361 ||||||||||| || || || |||||||||||||| |||||||||||||| |||||||| Sbjct: 291 atcgactcgtcagccgctacctcgctgcaggccgtgaagctgctcgcgctgtacctcact 350 Query: 362 ggagacaaggaaggtgcgatctccagcttgaaggaatggttgagtgattcagccatagga 421 ||||||||||||||||| |||||||| | ||||| ||||||||||||||||| || ||| Sbjct: 351 ggagacaaggaaggtgctatctccagtctcaaggagtggttgagtgattcagcaattgga 410 Query: 422 agcaatcctgttctgcgattgattgctggaattatatttatgcatgagcaagactacaac 481 ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 411 agcaatcctgttctgagattgattgctggaattatatttatgcatgagcaggactacaat 470 Query: 482 gaggctctcaagcacacacatactgggggaactctggacctgcatgcactgaacgtccag 541 ||||||||||| |||||||| |||| ||||||||||| |||||||| |||| |||||| Sbjct: 471 gaggctctcaaacacacacactctggaggaactctggatttgcatgcattgaatgtccag 530 Query: 542 atcttccttaagatgcaccgctcagattatgctgacaagcaactgaagatcatgcaacaa 601 |||||| | |||||||| || ||||| |||||||| |||||| ||||||||||||||||| Sbjct: 531 atcttcatcaagatgcatcgttcagactatgctgagaagcaattgaagatcatgcaacaa 590 Query: 602 actgacgaggaccatacactgacacaactagcaaatgcttggcttgatatcgctgttggc 661 | ||| || ||||||||||| |||||||| ||||| || ||| | | || ||||||||| Sbjct: 591 attgatgaagaccatacacttacacaacttgcaaacgcatggttgggcattgctgttggc 650 Query: 662 ggctctaagatccgggaagcttatctcatattccaggactttgctgagaagtaccctatg 721 |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 651 ggctctaagatccgtgaagcttatctcatattccaagactttgctgaaaagtacccaatg 710 Query: 722 acaggaatggttcttaatggcaaggcagtttgctgtatgcatatggggagctttgaggag 781 ||||| |||||| | || || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 711 acagggatggttttaaacgggaaggcagtctgctgtatgcacatgggaagctttgaggag 770 Query: 782 gctgaaactctattgcttgaagccctaaacaaggacgcaaaggatcctgaaactcttgcc 841 ||||| ||||| ||||||||||| | |||||||||||||| ||||||||||||||||| Sbjct: 771 gctgagactctgttgcttgaagcgttgaacaaggacgcaaaagatcctgaaactcttgcg 830 Query: 842 aatcttattgtatgtaatctccaccttggcaaaccgtcgtcccgatacttcagccagctg 901 ||||| |||||||||||||||||| | |||||||| || || |||||| ||||||||||| Sbjct: 831 aatctaattgtatgtaatctccacttaggcaaaccatcatcacgatacctcagccagctg 890 Query: 902 aagctgtcgcaccctgatcacgtgctagttaaga 935 ||||| ||||| ||||| || ||||||||||||| Sbjct: 891 aagctatcgcatcctgaccatgtgctagttaaga 924
>emb|CT828785.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA104N05, full insert sequence Length = 1182 Score = 728 bits (367), Expect = 0.0 Identities = 574/643 (89%) Strand = Plus / Plus Query: 288 tggtgatcagcgagatcgactcgtcggcggcgacgtcgctgcaggccgtcaagctgctcg 347 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 400 tggtgatcagcgagatcgactcgtccgcggcgacgtcgctgcaggccgtgaagctgctcg 459 Query: 348 cgctctacctcaccggagacaaggaaggtgcgatctccagcttgaaggaatggttgagtg 407 |||| |||||| |||||||||||||| ||||||| ||| |||||||||||||||||| Sbjct: 460 cgctgtacctctccggagacaaggaaagtgcgattgtcagtctgaaggaatggttgagtg 519 Query: 408 attcagccataggaagcaatcctgttctgcgattgattgctggaattatatttatgcatg 467 |||| || | ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 520 attcggcggttggaagcaatcctgttctacgattgattgctggaattatatttatgcatg 579 Query: 468 agcaagactacaacgaggctctcaagcacacacatactgggggaactctggacctgcatg 527 |||||||||||| || ||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 580 agcaagactacactgaagctctcaagcacacacactctggtggaactctggacctgcatg 639 Query: 528 cactgaacgtccagatcttccttaagatgcaccgctcagattatgctgacaagcaactga 587 || |||| |||||||||||| ||||||||||||| ||||| ||||| || |||||| | | Sbjct: 640 cattgaatgtccagatcttcattaagatgcaccgttcagactatgccgagaagcaattaa 699 Query: 588 agatcatgcaacaaactgacgaggaccatacactgacacaactagcaaatgcttggcttg 647 ||||||||||||| | ||| ||||||||||||||||||||||| ||||| || ||||| | Sbjct: 700 agatcatgcaacagattgatgaggaccatacactgacacaacttgcaaacgcatggctgg 759 Query: 648 atatcgctgttggcggctctaagatccgggaagcttatctcatattccaggactttgctg 707 | || |||||||| |||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 760 acattgctgttggtggctctaagatccgtgaagcttacctcatattccaagactttgctg 819 Query: 708 agaagtaccctatgacaggaatggttcttaatggcaaggcagtttgctgtatgcatatgg 767 | || ||||| ||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 820 aaaaatacccgatgacaggaatggttctaaatggcaaggcagtttgctgtatgcacatgg 879 Query: 768 ggagctttgaggaggctgaaactctattgcttgaagccctaaacaaggacgcaaaggatc 827 |||||||||| |||||||| ||||| || || ||||| | |||||||| ||||| |||| Sbjct: 880 ggagctttgatgaggctgagactcttttactcgaagcattgaacaaggatgcaaaagatc 939 Query: 828 ctgaaactcttgccaatcttattgtatgtaatctccaccttggcaaaccgtcgtcccgat 887 ||||||||||||| ||||||||||| |||||||||||||||||||||||||| || ||| Sbjct: 940 ctgaaactcttgctaatcttattgtgtgtaatctccaccttggcaaaccgtcatcaagat 999 Query: 888 acttcagccagctgaagctgtcgcaccctgatcacgtgctagt 930 || ||||||||||||| || || ||||| ||||| |||||||| Sbjct: 1000 acctcagccagctgaaactatcacaccccgatcatgtgctagt 1042 Score = 252 bits (127), Expect = 3e-63 Identities = 148/155 (95%) Strand = Plus / Plus Query: 132 cccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccagtccgcca 191 |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 140 ccccggacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccaggccgcca 199 Query: 192 tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 251 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 200 tcaacaacagcgacgtcccgggcctcgacgccgacgccgccgccgagcgcgacgccatcg 259 Query: 252 tcttccgctcctacatcgccctcggatcctaccag 286 |||||||||||||| |||| ||||| ||||||||| Sbjct: 260 tcttccgctcctacgtcgcgctcggctcctaccag 294
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 252 bits (127), Expect = 3e-63 Identities = 148/155 (95%) Strand = Plus / Minus Query: 132 cccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccagtccgcca 191 |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 31102649 ccccggacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccaggccgcca 31102590 Query: 192 tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 251 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 31102589 tcaacaacagcgacgtcccgggcctcgacgccgacgccgccgccgagcgcgacgccatcg 31102530 Query: 252 tcttccgctcctacatcgccctcggatcctaccag 286 |||||||||||||| |||| ||||| ||||||||| Sbjct: 31102529 tcttccgctcctacgtcgcgctcggctcctaccag 31102495 Score = 180 bits (91), Expect = 8e-42 Identities = 121/131 (92%) Strand = Plus / Minus Query: 662 ggctctaagatccgggaagcttatctcatattccaggactttgctgagaagtaccctatg 721 |||||||||||||| |||||||| ||||||||||| ||||||||||| || ||||| ||| Sbjct: 31100350 ggctctaagatccgtgaagcttacctcatattccaagactttgctgaaaaatacccgatg 31100291 Query: 722 acaggaatggttcttaatggcaaggcagtttgctgtatgcatatggggagctttgaggag 781 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 31100290 acaggaatggttctaaatggcaaggcagtttgctgtatgcacatggggagctttgatgag 31100231 Query: 782 gctgaaactct 792 ||||| ||||| Sbjct: 31100230 gctgagactct 31100220 Score = 178 bits (90), Expect = 3e-41 Identities = 123/134 (91%) Strand = Plus / Minus Query: 390 tgaaggaatggttgagtgattcagccataggaagcaatcctgttctgcgattgattgctg 449 |||||||||||||||||||||| || | ||||||||||||||||| ||||||||||||| Sbjct: 31101327 tgaaggaatggttgagtgattcggcggttggaagcaatcctgttctacgattgattgctg 31101268 Query: 450 gaattatatttatgcatgagcaagactacaacgaggctctcaagcacacacatactgggg 509 |||||||||||||||||||||||||||||| || ||||||||||||||||| |||| | Sbjct: 31101267 gaattatatttatgcatgagcaagactacactgaagctctcaagcacacacactctggtg 31101208 Query: 510 gaactctggacctg 523 |||||||||||||| Sbjct: 31101207 gaactctggacctg 31101194 Score = 135 bits (68), Expect = 4e-28 Identities = 80/84 (95%) Strand = Plus / Minus Query: 288 tggtgatcagcgagatcgactcgtcggcggcgacgtcgctgcaggccgtcaagctgctcg 347 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 31102389 tggtgatcagcgagatcgactcgtccgcggcgacgtcgctgcaggccgtgaagctgctcg 31102330 Query: 348 cgctctacctcaccggagacaagg 371 |||| |||||| |||||||||||| Sbjct: 31102329 cgctgtacctctccggagacaagg 31102306 Score = 129 bits (65), Expect = 3e-26 Identities = 119/137 (86%) Strand = Plus / Minus Query: 523 gcatgcactgaacgtccagatcttccttaagatgcaccgctcagattatgctgacaagca 582 ||||||| |||| |||||||||||| ||||||||||||| ||||| ||||| || ||||| Sbjct: 31100616 gcatgcattgaatgtccagatcttcattaagatgcaccgttcagactatgccgagaagca 31100557 Query: 583 actgaagatcatgcaacaaactgacgaggaccatacactgacacaactagcaaatgcttg 642 | | |||||||||||||| | ||| ||||||||||||||||||||||| ||||| || || Sbjct: 31100556 attaaagatcatgcaacagattgatgaggaccatacactgacacaacttgcaaacgcatg 31100497 Query: 643 gcttgatatcgctgttg 659 ||| || || ||||||| Sbjct: 31100496 gctggacattgctgttg 31100480 Score = 101 bits (51), Expect = 6e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 813 aggacgcaaaggatcctgaaactcttgccaatcttattgtatgtaatctccaccttggca 872 |||| ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 31100049 aggatgcaaaagatcctgaaactcttgctaatcttattgtgtgtaatctccaccttggca 31099990 Query: 873 aaccgtc 879 ||||||| Sbjct: 31099989 aaccgtc 31099983 Score = 44.1 bits (22), Expect = 1.2 Identities = 46/54 (85%) Strand = Plus / Plus Query: 233 gccgagcgcgacgtcatcgtcttccgctcctacatcgccctcggatcctaccag 286 |||||||||||| | || ||| |||||||||||||||| |||| ||| ||||| Sbjct: 32851643 gccgagcgcgactccctcctctaccgctcctacatcgccatcggctcccaccag 32851696
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 252 bits (127), Expect = 3e-63 Identities = 148/155 (95%) Strand = Plus / Minus Query: 132 cccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccagtccgcca 191 |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 84730 ccccggacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccaggccgcca 84671 Query: 192 tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 251 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 84670 tcaacaacagcgacgtcccgggcctcgacgccgacgccgccgccgagcgcgacgccatcg 84611 Query: 252 tcttccgctcctacatcgccctcggatcctaccag 286 |||||||||||||| |||| ||||| ||||||||| Sbjct: 84610 tcttccgctcctacgtcgcgctcggctcctaccag 84576 Score = 180 bits (91), Expect = 8e-42 Identities = 121/131 (92%) Strand = Plus / Minus Query: 662 ggctctaagatccgggaagcttatctcatattccaggactttgctgagaagtaccctatg 721 |||||||||||||| |||||||| ||||||||||| ||||||||||| || ||||| ||| Sbjct: 82431 ggctctaagatccgtgaagcttacctcatattccaagactttgctgaaaaatacccgatg 82372 Query: 722 acaggaatggttcttaatggcaaggcagtttgctgtatgcatatggggagctttgaggag 781 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 82371 acaggaatggttctaaatggcaaggcagtttgctgtatgcacatggggagctttgatgag 82312 Query: 782 gctgaaactct 792 ||||| ||||| Sbjct: 82311 gctgagactct 82301 Score = 178 bits (90), Expect = 3e-41 Identities = 123/134 (91%) Strand = Plus / Minus Query: 390 tgaaggaatggttgagtgattcagccataggaagcaatcctgttctgcgattgattgctg 449 |||||||||||||||||||||| || | ||||||||||||||||| ||||||||||||| Sbjct: 83408 tgaaggaatggttgagtgattcggcggttggaagcaatcctgttctacgattgattgctg 83349 Query: 450 gaattatatttatgcatgagcaagactacaacgaggctctcaagcacacacatactgggg 509 |||||||||||||||||||||||||||||| || ||||||||||||||||| |||| | Sbjct: 83348 gaattatatttatgcatgagcaagactacactgaagctctcaagcacacacactctggtg 83289 Query: 510 gaactctggacctg 523 |||||||||||||| Sbjct: 83288 gaactctggacctg 83275 Score = 135 bits (68), Expect = 4e-28 Identities = 80/84 (95%) Strand = Plus / Minus Query: 288 tggtgatcagcgagatcgactcgtcggcggcgacgtcgctgcaggccgtcaagctgctcg 347 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 84470 tggtgatcagcgagatcgactcgtccgcggcgacgtcgctgcaggccgtgaagctgctcg 84411 Query: 348 cgctctacctcaccggagacaagg 371 |||| |||||| |||||||||||| Sbjct: 84410 cgctgtacctctccggagacaagg 84387 Score = 129 bits (65), Expect = 3e-26 Identities = 119/137 (86%) Strand = Plus / Minus Query: 523 gcatgcactgaacgtccagatcttccttaagatgcaccgctcagattatgctgacaagca 582 ||||||| |||| |||||||||||| ||||||||||||| ||||| ||||| || ||||| Sbjct: 82697 gcatgcattgaatgtccagatcttcattaagatgcaccgttcagactatgccgagaagca 82638 Query: 583 actgaagatcatgcaacaaactgacgaggaccatacactgacacaactagcaaatgcttg 642 | | |||||||||||||| | ||| ||||||||||||||||||||||| ||||| || || Sbjct: 82637 attaaagatcatgcaacagattgatgaggaccatacactgacacaacttgcaaacgcatg 82578 Query: 643 gcttgatatcgctgttg 659 ||| || || ||||||| Sbjct: 82577 gctggacattgctgttg 82561 Score = 101 bits (51), Expect = 6e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 813 aggacgcaaaggatcctgaaactcttgccaatcttattgtatgtaatctccaccttggca 872 |||| ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 82130 aggatgcaaaagatcctgaaactcttgctaatcttattgtgtgtaatctccaccttggca 82071 Query: 873 aaccgtc 879 ||||||| Sbjct: 82070 aaccgtc 82064
>gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1), unknown (Z438D03.5), epsilon-COP (Z438D03.6), putative kinase (Z438D03.7), unknown (Z438D03.25), and C1-B73 (Z438D03.27) genes, complete cds Length = 185988 Score = 200 bits (101), Expect = 8e-48 Identities = 149/165 (90%) Strand = Plus / Plus Query: 122 gcgatggccacccccgacctcctcttcaacctgcgcaacctcttctacctcggcgcctac 181 ||||||||| |||||||||| |||||||| ||||| |||||||||||||| ||||||||| Sbjct: 39633 gcgatggcctcccccgacctgctcttcaatctgcggaacctcttctacctgggcgcctac 39692 Query: 182 cagtccgccatcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgc 241 ||| | ||||| ||||||| |||| ||| |||||||||||||| |||||| || |||||| Sbjct: 39693 caggcagccattaacaacatcgacatcctgggcctcgacgccgccgccgccgctgagcgc 39752 Query: 242 gacgtcatcgtcttccgctcctacatcgccctcggatcctaccag 286 |||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 39753 gacgccatcgtcttccgctcctacatcgccctcggctcctaccag 39797 Score = 65.9 bits (33), Expect = 3e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 323 tcgctgcaggccgtcaagctgctcgcgctctacctcaccggagacaagg 371 |||||||||||||| ||||||||||| || |||||||| |||||||||| Sbjct: 39837 tcgctgcaggccgtgaagctgctcgctctgtacctcactggagacaagg 39885
>ref|NM_129037.3| Arabidopsis thaliana protein transporter (AT2G34840) mRNA, complete cds Length = 1161 Score = 107 bits (54), Expect = 9e-20 Identities = 159/194 (81%) Strand = Plus / Plus Query: 659 ggcggctctaagatccgggaagcttatctcatattccaggactttgctgagaagtaccct 718 ||||| || ||||| | ||||||||||||||| ||| |||| ||| ||||||||||||| Sbjct: 644 ggcggttcgaagatacaggaagcttatctcattttcgaggatttttctgagaagtaccca 703 Query: 719 atgacaggaatggttcttaatggcaaggcagtttgctgtatgcatatggggagctttgag 778 |||||| | || | | |||||||| || |||||||||||||| ||||| | ||| || Sbjct: 704 atgacatgcttgatcttgaatggcaaagctgtttgctgtatgcaaatgggtaacttcgat 763 Query: 779 gaggctgaaactctattgcttgaagccctaaacaaggacgcaaaggatcctgaaactctt 838 || |||||||| ||| | |||||||| || |||||||| || || ||||| ||||||||| Sbjct: 764 gaagctgaaacactacttcttgaagcactcaacaaggatgctaaagatccagaaactctt 823 Query: 839 gccaatcttattgt 852 || |||||| |||| Sbjct: 824 gcaaatcttgttgt 837 Score = 44.1 bits (22), Expect = 1.2 Identities = 49/58 (84%) Strand = Plus / Plus Query: 249 tcgtcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgagatcga 306 |||||||||| || |||||||||||||| ||| ||||| || ||||| |||||||| Sbjct: 228 tcgtcttccgatcttacatcgccctcggtagctatcagcttgttatcagtgagatcga 285
>gb|AY142051.1| Arabidopsis thaliana At2g34840/F19I3.7 mRNA, complete cds Length = 882 Score = 107 bits (54), Expect = 9e-20 Identities = 159/194 (81%) Strand = Plus / Plus Query: 659 ggcggctctaagatccgggaagcttatctcatattccaggactttgctgagaagtaccct 718 ||||| || ||||| | ||||||||||||||| ||| |||| ||| ||||||||||||| Sbjct: 553 ggcggttcgaagatacaggaagcttatctcattttcgaggatttttctgagaagtaccca 612 Query: 719 atgacaggaatggttcttaatggcaaggcagtttgctgtatgcatatggggagctttgag 778 |||||| | || | | |||||||| || |||||||||||||| ||||| | ||| || Sbjct: 613 atgacatgcttgatcttgaatggcaaagctgtttgctgtatgcaaatgggtaacttcgat 672 Query: 779 gaggctgaaactctattgcttgaagccctaaacaaggacgcaaaggatcctgaaactctt 838 || |||||||| ||| | |||||||| || |||||||| || || ||||| ||||||||| Sbjct: 673 gaagctgaaacactacttcttgaagcactcaacaaggatgctaaagatccagaaactctt 732 Query: 839 gccaatcttattgt 852 || |||||| |||| Sbjct: 733 gcaaatcttgttgt 746 Score = 44.1 bits (22), Expect = 1.2 Identities = 49/58 (84%) Strand = Plus / Plus Query: 249 tcgtcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgagatcga 306 |||||||||| || |||||||||||||| ||| ||||| || ||||| |||||||| Sbjct: 137 tcgtcttccgatcttacatcgccctcggtagctatcagcttgttatcagtgagatcga 194
>gb|AY075627.1| Arabidopsis thaliana At2g34840/F19I3.7 mRNA, complete cds Length = 1129 Score = 107 bits (54), Expect = 9e-20 Identities = 159/194 (81%) Strand = Plus / Plus Query: 659 ggcggctctaagatccgggaagcttatctcatattccaggactttgctgagaagtaccct 718 ||||| || ||||| | ||||||||||||||| ||| |||| ||| ||||||||||||| Sbjct: 612 ggcggttcgaagatacaggaagcttatctcattttcgaggatttttctgagaagtaccca 671 Query: 719 atgacaggaatggttcttaatggcaaggcagtttgctgtatgcatatggggagctttgag 778 |||||| | || | | |||||||| || |||||||||||||| ||||| | ||| || Sbjct: 672 atgacatgcttgatcttgaatggcaaagctgtttgctgtatgcaaatgggtaacttcgat 731 Query: 779 gaggctgaaactctattgcttgaagccctaaacaaggacgcaaaggatcctgaaactctt 838 || |||||||| ||| | |||||||| || |||||||| || || ||||| ||||||||| Sbjct: 732 gaagctgaaacactacttcttgaagcactcaacaaggatgctaaagatccagaaactctt 791 Query: 839 gccaatcttattgt 852 || |||||| |||| Sbjct: 792 gcaaatcttgttgt 805 Score = 44.1 bits (22), Expect = 1.2 Identities = 49/58 (84%) Strand = Plus / Plus Query: 249 tcgtcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgagatcga 306 |||||||||| || |||||||||||||| ||| ||||| || ||||| |||||||| Sbjct: 196 tcgtcttccgatcttacatcgccctcggtagctatcagcttgttatcagtgagatcga 253
>ref|NM_102800.2| Arabidopsis thaliana protein transporter (AT1G30630) mRNA, complete cds Length = 1199 Score = 95.6 bits (48), Expect = 4e-16 Identities = 123/148 (83%) Strand = Plus / Plus Query: 440 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacaca 499 ||||||||||| | |||||| ||||||||| ||||||| || |||||||| |||||||| Sbjct: 419 ttgattgctggtactatattcatgcatgaggaagactataatgaggctctgaagcacact 478 Query: 500 catactgggggaactctggacctgcatgcactgaacgtccagatcttccttaagatgcac 559 ||| |||| ||||| |||| |||||||| |||| |||||||| ||| | ||||||||| Sbjct: 479 cattctggaggaaccatggatctgcatgctttgaatgtccagatattcataaagatgcac 538 Query: 560 cgctcagattatgctgacaagcaactga 587 | ||||||| ||| || || ||||||| Sbjct: 539 agatcagattttgcggagaaacaactga 566 Score = 81.8 bits (41), Expect = 5e-12 Identities = 134/165 (81%) Strand = Plus / Plus Query: 676 ggaagcttatctcatattccaggactttgctgagaagtaccctatgacaggaatggttct 735 |||||||||||| || |||||||| || ||||||||||||| |||||| | || | | Sbjct: 655 ggaagcttatctaatcttccaggatttctctgagaagtacccaatgacaagcttgatctt 714 Query: 736 taatggcaaggcagtttgctgtatgcatatggggagctttgaggaggctgaaactctatt 795 || ||||| ||||||||||| ||||||||||| | ||||| || ||||| |||||| | Sbjct: 715 gaacggcaaagcagtttgctgcatgcatatgggtaattttgaagaagctgagactctact 774 Query: 796 gcttgaagccctaaacaaggacgcaaaggatcctgaaactcttgc 840 |||||||| || |||||||| || || || || ||||||||||| Sbjct: 775 acttgaagcactcaacaaggatgctaaagacccagaaactcttgc 819
>gb|AF348588.1| Arabidopsis thaliana putative coatomer protein, epsilon subunit (At1g30630) mRNA, complete cds Length = 879 Score = 95.6 bits (48), Expect = 4e-16 Identities = 123/148 (83%) Strand = Plus / Plus Query: 440 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacaca 499 ||||||||||| | |||||| ||||||||| ||||||| || |||||||| |||||||| Sbjct: 331 ttgattgctggtactatattcatgcatgaggaagactataatgaggctctgaagcacact 390 Query: 500 catactgggggaactctggacctgcatgcactgaacgtccagatcttccttaagatgcac 559 ||| |||| ||||| |||| |||||||| |||| |||||||| ||| | ||||||||| Sbjct: 391 cattctggaggaaccatggatctgcatgctttgaatgtccagatattcataaagatgcac 450 Query: 560 cgctcagattatgctgacaagcaactga 587 | ||||||| ||| || || ||||||| Sbjct: 451 agatcagattttgcggagaaacaactga 478 Score = 81.8 bits (41), Expect = 5e-12 Identities = 134/165 (81%) Strand = Plus / Plus Query: 676 ggaagcttatctcatattccaggactttgctgagaagtaccctatgacaggaatggttct 735 |||||||||||| || |||||||| || ||||||||||||| |||||| | || | | Sbjct: 567 ggaagcttatctaatcttccaggatttctctgagaagtacccaatgacaagcttgatctt 626 Query: 736 taatggcaaggcagtttgctgtatgcatatggggagctttgaggaggctgaaactctatt 795 || ||||| ||||||||||| ||||||||||| | ||||| || ||||| |||||| | Sbjct: 627 gaacggcaaagcagtttgctgcatgcatatgggtaattttgaagaagctgagactctact 686 Query: 796 gcttgaagccctaaacaaggacgcaaaggatcctgaaactcttgc 840 |||||||| || |||||||| || || || || ||||||||||| Sbjct: 687 acttgaagcactcaacaaggatgctaaagacccagaaactcttgc 731
>gb|AY063113.1| Arabidopsis thaliana putative coatomer protein, epsilon subunit (At1g30630) mRNA, complete cds Length = 910 Score = 95.6 bits (48), Expect = 4e-16 Identities = 123/148 (83%) Strand = Plus / Plus Query: 440 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacaca 499 ||||||||||| | |||||| ||||||||| ||||||| || |||||||| |||||||| Sbjct: 331 ttgattgctggtactatattcatgcatgaggaagactataatgaggctctgaagcacact 390 Query: 500 catactgggggaactctggacctgcatgcactgaacgtccagatcttccttaagatgcac 559 ||| |||| ||||| |||| |||||||| |||| |||||||| ||| | ||||||||| Sbjct: 391 cattctggaggaaccatggatctgcatgctttgaatgtccagatattcataaagatgcac 450 Query: 560 cgctcagattatgctgacaagcaactga 587 | ||||||| ||| || || ||||||| Sbjct: 451 agatcagattttgcggagaaacaactga 478 Score = 81.8 bits (41), Expect = 5e-12 Identities = 134/165 (81%) Strand = Plus / Plus Query: 676 ggaagcttatctcatattccaggactttgctgagaagtaccctatgacaggaatggttct 735 |||||||||||| || |||||||| || ||||||||||||| |||||| | || | | Sbjct: 567 ggaagcttatctaatcttccaggatttctctgagaagtacccaatgacaagcttgatctt 626 Query: 736 taatggcaaggcagtttgctgtatgcatatggggagctttgaggaggctgaaactctatt 795 || ||||| ||||||||||| ||||||||||| | ||||| || ||||| |||||| | Sbjct: 627 gaacggcaaagcagtttgctgcatgcatatgggtaattttgaagaagctgagactctact 686 Query: 796 gcttgaagccctaaacaaggacgcaaaggatcctgaaactcttgc 840 |||||||| || |||||||| || || || || ||||||||||| Sbjct: 687 acttgaagcactcaacaaggatgctaaagacccagaaactcttgc 731
>gb|AF370325.1| Arabidopsis thaliana putative coatomer protein, epsilon subunit (At1g30630) mRNA, complete cds Length = 1172 Score = 95.6 bits (48), Expect = 4e-16 Identities = 123/148 (83%) Strand = Plus / Plus Query: 440 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacaca 499 ||||||||||| | |||||| ||||||||| ||||||| || |||||||| |||||||| Sbjct: 394 ttgattgctggtactatattcatgcatgaggaagactataatgaggctctgaagcacact 453 Query: 500 catactgggggaactctggacctgcatgcactgaacgtccagatcttccttaagatgcac 559 ||| |||| ||||| |||| |||||||| |||| |||||||| ||| | ||||||||| Sbjct: 454 cattctggaggaaccatggatctgcatgctttgaatgtccagatattcataaagatgcac 513 Query: 560 cgctcagattatgctgacaagcaactga 587 | ||||||| ||| || || ||||||| Sbjct: 514 agatcagattttgcggagaaacaactga 541 Score = 81.8 bits (41), Expect = 5e-12 Identities = 134/165 (81%) Strand = Plus / Plus Query: 676 ggaagcttatctcatattccaggactttgctgagaagtaccctatgacaggaatggttct 735 |||||||||||| || |||||||| || ||||||||||||| |||||| | || | | Sbjct: 630 ggaagcttatctaatcttccaggatttctctgagaagtacccaatgacaagcttgatctt 689 Query: 736 taatggcaaggcagtttgctgtatgcatatggggagctttgaggaggctgaaactctatt 795 || ||||| ||||||||||| ||||||||||| | ||||| || ||||| |||||| | Sbjct: 690 gaacggcaaagcagtttgctgcatgcatatgggtaattttgaagaagctgagactctact 749 Query: 796 gcttgaagccctaaacaaggacgcaaaggatcctgaaactcttgc 840 |||||||| || |||||||| || || || || ||||||||||| Sbjct: 750 acttgaagcactcaacaaggatgctaaagacccagaaactcttgc 794
>gb|AY087474.1| Arabidopsis thaliana clone 35814 mRNA, complete sequence Length = 1189 Score = 95.6 bits (48), Expect = 4e-16 Identities = 123/148 (83%) Strand = Plus / Plus Query: 440 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacaca 499 ||||||||||| | |||||| ||||||||| ||||||| || |||||||| |||||||| Sbjct: 419 ttgattgctggtactatattcatgcatgaggaagactataatgaggctctgaagcacact 478 Query: 500 catactgggggaactctggacctgcatgcactgaacgtccagatcttccttaagatgcac 559 ||| |||| ||||| |||| |||||||| |||| |||||||| ||| | ||||||||| Sbjct: 479 cattctggaggaaccatggatctgcatgctttgaatgtccagatattcataaagatgcac 538 Query: 560 cgctcagattatgctgacaagcaactga 587 | ||||||| ||| || || ||||||| Sbjct: 539 agatcagattttgcggagaaacaactga 566 Score = 81.8 bits (41), Expect = 5e-12 Identities = 134/165 (81%) Strand = Plus / Plus Query: 676 ggaagcttatctcatattccaggactttgctgagaagtaccctatgacaggaatggttct 735 |||||||||||| || |||||||| || ||||||||||||| |||||| | || | | Sbjct: 655 ggaagcttatctaatcttccaggatttctctgagaagtacccaatgacaagcttgatctt 714 Query: 736 taatggcaaggcagtttgctgtatgcatatggggagctttgaggaggctgaaactctatt 795 || ||||| ||||||||||| ||||||||||| | ||||| || ||||| |||||| | Sbjct: 715 gaacggcaaagcagtttgctgcatgcatatgggtaattttgaagaagctgagactctact 774 Query: 796 gcttgaagccctaaacaaggacgcaaaggatcctgaaactcttgc 840 |||||||| || |||||||| || || || || ||||||||||| Sbjct: 775 acttgaagcactcaacaaggatgctaaagacccagaaactcttgc 819
>emb|BX814617.1|CNS0ADQB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB84ZH02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1174 Score = 95.6 bits (48), Expect = 4e-16 Identities = 123/148 (83%) Strand = Plus / Plus Query: 440 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacaca 499 ||||||||||| | |||||| ||||||||| ||||||| || |||||||| |||||||| Sbjct: 394 ttgattgctggtactatattcatgcatgaggaagactataatgaggctctgaagcacact 453 Query: 500 catactgggggaactctggacctgcatgcactgaacgtccagatcttccttaagatgcac 559 ||| |||| ||||| |||| |||||||| |||| |||||||| ||| | ||||||||| Sbjct: 454 cattctggaggaaccatggatctgcatgctttgaatgtccagatattcataaagatgcac 513 Query: 560 cgctcagattatgctgacaagcaactga 587 | ||||||| ||| || || ||||||| Sbjct: 514 agatcagattttgcggagaaacaactga 541 Score = 81.8 bits (41), Expect = 5e-12 Identities = 134/165 (81%) Strand = Plus / Plus Query: 676 ggaagcttatctcatattccaggactttgctgagaagtaccctatgacaggaatggttct 735 |||||||||||| || |||||||| || ||||||||||||| |||||| | || | | Sbjct: 630 ggaagcttatctaatcttccaggatttctctgagaagtacccaatgacaagcttgatctt 689 Query: 736 taatggcaaggcagtttgctgtatgcatatggggagctttgaggaggctgaaactctatt 795 || ||||| ||||||||||| ||||||||||| | ||||| || ||||| |||||| | Sbjct: 690 gaacggcaaagcagtttgctgcatgcatatgggtaattttgaagaagctgagactctact 749 Query: 796 gcttgaagccctaaacaaggacgcaaaggatcctgaaactcttgc 840 |||||||| || |||||||| || || || || ||||||||||| Sbjct: 750 acttgaagcactcaacaaggatgctaaagacccagaaactcttgc 794
>emb|BX841764.1|CNS09Y7R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB11ZC12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1136 Score = 95.6 bits (48), Expect = 4e-16 Identities = 123/148 (83%) Strand = Plus / Plus Query: 440 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacaca 499 ||||||||||| | |||||| ||||||||| ||||||| || |||||||| |||||||| Sbjct: 380 ttgattgctggtactatattcatgcatgaggaagactataatgaggctctgaagcacact 439 Query: 500 catactgggggaactctggacctgcatgcactgaacgtccagatcttccttaagatgcac 559 ||| |||| ||||| |||| |||||||| |||| |||||||| ||| | ||||||||| Sbjct: 440 cattctggaggaaccatggatctgcatgctttgaatgtccagatattcataaagatgcac 499 Query: 560 cgctcagattatgctgacaagcaactga 587 | ||||||| ||| || || ||||||| Sbjct: 500 agatcagattttgcggagaaacaactga 527 Score = 81.8 bits (41), Expect = 5e-12 Identities = 134/165 (81%) Strand = Plus / Plus Query: 676 ggaagcttatctcatattccaggactttgctgagaagtaccctatgacaggaatggttct 735 |||||||||||| || |||||||| || ||||||||||||| |||||| | || | | Sbjct: 616 ggaagcttatctaatcttccaggatttctctgagaagtacccaatgacaagcttgatctt 675 Query: 736 taatggcaaggcagtttgctgtatgcatatggggagctttgaggaggctgaaactctatt 795 || ||||| ||||||||||| ||||||||||| | ||||| || ||||| |||||| | Sbjct: 676 gaacggcaaagcagtttgctgcatgcatatgggtaattttgaagaagctgagactctact 735 Query: 796 gcttgaagccctaaacaaggacgcaaaggatcctgaaactcttgc 840 |||||||| || |||||||| || || || || ||||||||||| Sbjct: 736 acttgaagcactcaacaaggatgctaaagacccagaaactcttgc 780
>gb|DQ539634.1| Brassica napus clone BnA37 mRNA sequence Length = 262 Score = 87.7 bits (44), Expect = 9e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 461 atgcatgagcaagactacaacgaggctctcaagcacacacatactgggggaactctggac 520 ||||||||| ||||||| | ||||||||||||||||| ||| |||| ||||| ||||| Sbjct: 10 atgcatgaggaagactatagtgaggctctcaagcacactcattctggaggaaccatggac 69 Query: 521 ctgcatgcactgaacgtccagatcttccttaagatgcaccgctcagattatgctga 576 ||||| || |||| |||||||| ||| | ||||||||| | |||||||||||||| Sbjct: 70 ctgcacgctttgaatgtccagatattcataaagatgcacaggtcagattatgctga 125
>emb|AM263430.1| Chenopodium rubrum partial mRNA for putative coatomer protein, epsilon subunit (cope gene) Length = 635 Score = 87.7 bits (44), Expect = 9e-14 Identities = 197/248 (79%) Strand = Plus / Plus Query: 587 aagatcatgcaacaaactgacgaggaccatacactgacacaactagcaaatgcttggctt 646 ||||| ||||||||| |||| || || || ||| |||| ||||| || ||||||||||| Sbjct: 303 aagattatgcaacaagctgatgaagatcacacattgactcaacttgctaatgcttggcta 362 Query: 647 gatatcgctgttggcggctctaagatccgggaagcttatctcatattccaggactttgct 706 || | || || || || || ||||| | |||||| |||||||| |||||||| ||| | Sbjct: 363 aatttggcagtgggaggttccaagatacaggaagcatatctcatcttccaggatttttca 422 Query: 707 gagaagtaccctatgacaggaatggttcttaatggcaaggcagtttgctgtatgcatatg 766 |||||||| ||||||| || || | || ||||||||||| ||||| || ||||| ||| Sbjct: 423 gagaagtattctatgactggcttgatcctgaatggcaaggctgtttgttgcatgcacatg 482 Query: 767 gggagctttgaggaggctgaaactctattgcttgaagccctaaacaaggacgcaaaggat 826 || | |||||| || || ||| | ||||| |||||||| || |||||||| || |||||| Sbjct: 483 ggaaactttgatgaagcagaatcgctattacttgaagctctgaacaaggatgcgaaggat 542 Query: 827 cctgaaac 834 ||||||| Sbjct: 543 gctgaaac 550
>gb|BT014249.1| Lycopersicon esculentum clone 133451F, mRNA sequence Length = 1320 Score = 83.8 bits (42), Expect = 1e-12 Identities = 78/90 (86%) Strand = Plus / Plus Query: 737 aatggcaaggcagtttgctgtatgcatatggggagctttgaggaggctgaaactctattg 796 ||||| ||||| |||||||| ||||| ||||||| ||||| || ||||| || || ||| Sbjct: 711 aatgggaaggctgtttgctgcatgcacatggggaattttgacgaagctgagacactgttg 770 Query: 797 cttgaagccctaaacaaggacgcaaaggat 826 ||||||||||||||||||||| |||||||| Sbjct: 771 cttgaagccctaaacaaggacacaaaggat 800 Score = 54.0 bits (27), Expect = 0.001 Identities = 159/203 (78%) Strand = Plus / Plus Query: 443 attgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacacacat 502 |||||||| ||| |||| ||||||||||| || ||||| || ||| | ||||| ||| || Sbjct: 417 attgctgggattgtattcatgcatgagcaggattacaatgaagctttgaagcatacaaat 476 Query: 503 actgggggaactctggacctgcatgcactgaacgtccagatcttccttaagatgcaccgc 562 |||| || || |||| ||||||| |||| |||||||| ||| |||||||||| | Sbjct: 477 gctggagggacgatggaattgcatgctttgaatgtccagatattcattaagatgcatagg 536 Query: 563 tcagattatgctgacaagcaactgaagatcatgcaacaaactgacgaggaccatacactg 622 || |||||||| || || || ||| ||||||||||| |||| || || ||||| || Sbjct: 537 tccgattatgcagagaaacagttgagaatcatgcaacaggctgatgaagatcatacccta 596 Query: 623 acacaactagcaaatgcttggct 645 || ||||| |||||||| ||||| Sbjct: 597 actcaacttgcaaatgcatggct 619
>emb|BX814442.1|CNS0ADOH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB74ZA12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1145 Score = 83.8 bits (42), Expect = 1e-12 Identities = 108/130 (83%) Strand = Plus / Plus Query: 440 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacaca 499 ||||||||||| | |||| | ||||||||| ||||||| | |||||||| |||||||| Sbjct: 408 ttgattgctggtactatactcatgcatgaggaagactatgatgaggctctgaagcacact 467 Query: 500 catactgggggaactctggacctgcatgcactgaacgtccagatcttccttaagatgcac 559 ||| |||| ||||| |||| |||||||| |||| |||||||| ||| | ||||||||| Sbjct: 468 cattctggaggaaccatggatctgcatgctttgaatgtccagatattcatgaagatgcac 527 Query: 560 cgctcagatt 569 ||||||||| Sbjct: 528 agctcagatt 537 Score = 50.1 bits (25), Expect = 0.019 Identities = 43/49 (87%) Strand = Plus / Plus Query: 676 ggaagcttatctcatattccaggactttgctgagaagtaccctatgaca 724 |||||||||||| || |||||||| || ||||||||||||| |||||| Sbjct: 644 ggaagcttatctaatcttccaggatttctctgagaagtacccaatgaca 692
>gb|AC004238.3| Arabidopsis thaliana chromosome 2 clone F19I3 map ve016, complete sequence Length = 108484 Score = 81.8 bits (41), Expect = 5e-12 Identities = 128/157 (81%) Strand = Plus / Plus Query: 659 ggcggctctaagatccgggaagcttatctcatattccaggactttgctgagaagtaccct 718 ||||| || ||||| | ||||||||||||||| ||| |||| ||| ||||||||||||| Sbjct: 32189 ggcggttcgaagatacaggaagcttatctcattttcgaggatttttctgagaagtaccca 32248 Query: 719 atgacaggaatggttcttaatggcaaggcagtttgctgtatgcatatggggagctttgag 778 |||||| | || | | |||||||| || |||||||||||||| ||||| | ||| || Sbjct: 32249 atgacatgcttgatcttgaatggcaaagctgtttgctgtatgcaaatgggtaacttcgat 32308 Query: 779 gaggctgaaactctattgcttgaagccctaaacaagg 815 || |||||||| ||| | |||||||| || ||||||| Sbjct: 32309 gaagctgaaacactacttcttgaagcactcaacaagg 32345
>emb|BX814680.1|CNS0AEHW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB89ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 640 Score = 81.8 bits (41), Expect = 5e-12 Identities = 134/165 (81%) Strand = Plus / Plus Query: 676 ggaagcttatctcatattccaggactttgctgagaagtaccctatgacaggaatggttct 735 |||||||||||| || |||||||| || ||||||||||||| |||||| | || | | Sbjct: 112 ggaagcttatctaatcttccaggatttctctgagaagtacccaatgacaagcttgctctt 171 Query: 736 taatggcaaggcagtttgctgtatgcatatggggagctttgaggaggctgaaactctatt 795 || ||||| ||||||||||| ||||||||||| | ||||| || ||||| |||||| | Sbjct: 172 gaacggcaaagcagtttgctgcatgcatatgggtaattttgaagaagctgagactctact 231 Query: 796 gcttgaagccctaaacaaggacgcaaaggatcctgaaactcttgc 840 |||||||| || |||||||| || || || || ||||||||||| Sbjct: 232 acttgaagcactcaacaaggatgctaaagacccagaaactcttgc 276
>emb|CT988100.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 540 Score = 77.8 bits (39), Expect = 8e-11 Identities = 207/263 (78%) Strand = Plus / Minus Query: 566 gattatgctgacaagcaactgaagatcatgcaacaaactgacgaggaccatacactgaca 625 ||||||||||| || || || | |||||||||||| | ||| ||||| || |||| || Sbjct: 407 gattatgctgagaaacagctaaggatcatgcaacagattgatgaggatcactcactaact 348 Query: 626 caactagcaaatgcttggcttgatatcgctgttggcggctctaagatccgggaagcttat 685 ||||| |||||||| ||||| || || ||||| || || | ||||| | |||||| ||| Sbjct: 347 caacttgcaaatgcatggctagacatggctgtgggtggtgccaagatacaggaagcatat 288 Query: 686 ctcatattccaggactttgctgagaagtaccctatgacaggaatggttcttaatggcaag 745 ||||| ||||| || || |||||||||| | ||||||||| || | | ||||| ||| Sbjct: 287 ctcattttccaagatttctctgagaagtatcagatgacaggattgatattgaatgggaag 228 Query: 746 gcagtttgctgtatgcatatggggagctttgaggaggctgaaactctattgcttgaagcc 805 || |||||||| ||||| ||||| | ||||| || |||||||| | ||||||||||| Sbjct: 227 gctgtttgctgcatgcacatgggaaattttgatgaagctgaaaccttgttgcttgaagct 168 Query: 806 ctaaacaaggacgcaaaggatcc 828 | || ||||| ||||||||||| Sbjct: 167 ttgaataaggatgcaaaggatcc 145
>emb|CT988089.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 435 Score = 77.8 bits (39), Expect = 8e-11 Identities = 207/263 (78%) Strand = Plus / Plus Query: 566 gattatgctgacaagcaactgaagatcatgcaacaaactgacgaggaccatacactgaca 625 ||||||||||| || || || | |||||||||||| | ||| ||||| || |||| || Sbjct: 29 gattatgctgagaaacagctaaggatcatgcaacagattgatgaggatcactcactaact 88 Query: 626 caactagcaaatgcttggcttgatatcgctgttggcggctctaagatccgggaagcttat 685 ||||| |||||||| ||||| || || ||||| || || | ||||| | |||||| ||| Sbjct: 89 caacttgcaaatgcatggctagacatggctgtgggtggtgccaagatacaggaagcatat 148 Query: 686 ctcatattccaggactttgctgagaagtaccctatgacaggaatggttcttaatggcaag 745 ||||| ||||| || || |||||||||| | ||||||||| || | | ||||| ||| Sbjct: 149 ctcattttccaagatttctctgagaagtatcagatgacaggattgatattgaatgggaag 208 Query: 746 gcagtttgctgtatgcatatggggagctttgaggaggctgaaactctattgcttgaagcc 805 || |||||||| ||||| ||||| | ||||| || |||||||| | ||||||||||| Sbjct: 209 gctgtttgctgcatgcacatgggaaattttgatgaagctgaaaccttgttgcttgaagct 268 Query: 806 ctaaacaaggacgcaaaggatcc 828 | || ||||| ||||||||||| Sbjct: 269 ttgaataaggatgcaaaggatcc 291
>emb|CT988356.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 438 Score = 77.8 bits (39), Expect = 8e-11 Identities = 207/263 (78%) Strand = Plus / Plus Query: 566 gattatgctgacaagcaactgaagatcatgcaacaaactgacgaggaccatacactgaca 625 ||||||||||| || || || | |||||||||||| | ||| ||||| || |||| || Sbjct: 32 gattatgctgagaaacagctaaggatcatgcaacagattgatgaggatcactcactaact 91 Query: 626 caactagcaaatgcttggcttgatatcgctgttggcggctctaagatccgggaagcttat 685 ||||| |||||||| ||||| || || ||||| || || | ||||| | |||||| ||| Sbjct: 92 caacttgcaaatgcatggctagacatggctgtgggtggtgccaagatacaggaagcatat 151 Query: 686 ctcatattccaggactttgctgagaagtaccctatgacaggaatggttcttaatggcaag 745 ||||| ||||| || || |||||||||| | ||||||||| || | | ||||| ||| Sbjct: 152 ctcattttccaagatttctctgagaagtatcagatgacaggattgatattgaatgggaag 211 Query: 746 gcagtttgctgtatgcatatggggagctttgaggaggctgaaactctattgcttgaagcc 805 || |||||||| ||||| ||||| | ||||| || |||||||| | ||||||||||| Sbjct: 212 gctgtttgctgcatgcacatgggaaattttgatgaagctgaaaccttgttgcttgaagct 271 Query: 806 ctaaacaaggacgcaaaggatcc 828 | || ||||| ||||||||||| Sbjct: 272 ttgaataaggatgcaaaggatcc 294
>emb|CT988294.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 438 Score = 77.8 bits (39), Expect = 8e-11 Identities = 207/263 (78%) Strand = Plus / Minus Query: 566 gattatgctgacaagcaactgaagatcatgcaacaaactgacgaggaccatacactgaca 625 ||||||||||| || || || | |||||||||||| | ||| ||||| || |||| || Sbjct: 407 gattatgctgagaaacagctaaggatcatgcaacagattgatgaggatcactcactaact 348 Query: 626 caactagcaaatgcttggcttgatatcgctgttggcggctctaagatccgggaagcttat 685 ||||| |||||||| ||||| || || ||||| || || | ||||| | |||||| ||| Sbjct: 347 caacttgcaaatgcatggctagacatggctgtgggtggtgccaagatacaggaagcatat 288 Query: 686 ctcatattccaggactttgctgagaagtaccctatgacaggaatggttcttaatggcaag 745 ||||| ||||| || || |||||||||| | ||||||||| || | | ||||| ||| Sbjct: 287 ctcattttccaagatttctctgagaagtatcagatgacaggattgatattgaatgggaag 228 Query: 746 gcagtttgctgtatgcatatggggagctttgaggaggctgaaactctattgcttgaagcc 805 || |||||||| ||||| ||||| | ||||| || |||||||| | ||||||||||| Sbjct: 227 gctgtttgctgcatgcacatgggaaattttgatgaagctgaaaccttgttgcttgaagct 168 Query: 806 ctaaacaaggacgcaaaggatcc 828 | || ||||| ||||||||||| Sbjct: 167 ttgaataaggatgcaaaggatcc 145
>dbj|AB042113.1| Glycine max cope1 mRNA for epsilon1-COP, complete cds Length = 1269 Score = 77.8 bits (39), Expect = 8e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 137 gacctcctcttcaacctgcgcaacctcttctacctcggcgcctaccagtccgccatcaac 196 |||| |||||||||||| |||||| ||||||||||||||| ||||| ||||||||||| Sbjct: 71 gaccacctcttcaacctccgcaacaacttctacctcggcgcttaccaagccgccatcaac 130 Query: 197 aacagcgacgt 207 | ||||||||| Sbjct: 131 agcagcgacgt 141 Score = 69.9 bits (35), Expect = 2e-08 Identities = 98/119 (82%) Strand = Plus / Plus Query: 737 aatggcaaggcagtttgctgtatgcatatggggagctttgaggaggctgaaactctattg 796 ||||||||||| |||||||| ||||| ||||| | ||| || || ||||| || || ||| Sbjct: 677 aatggcaaggctgtttgctgcatgcacatgggcaacttcgacgaagctgagacccttttg 736 Query: 797 cttgaagccctaaacaaggacgcaaaggatcctgaaactcttgccaatcttattgtatg 855 ||||||| || |||||||| || | |||||| |||||||| |||||||| ||||||| Sbjct: 737 gttgaagctcttaacaaggatgccagggatccagaaactctagccaatctagttgtatg 795
>gb|AC189655.1| Brassica rapa subsp. pekinensis clone KBrS012M03, complete sequence Length = 107479 Score = 75.8 bits (38), Expect = 3e-10 Identities = 125/154 (81%) Strand = Plus / Plus Query: 662 ggctctaagatccgggaagcttatctcatattccaggactttgctgagaagtaccctatg 721 ||||| ||||| | |||||||||||| || |||||||| || |||||| ||| || ||| Sbjct: 103508 ggctcgaagatacaggaagcttatcttattttccaggatttctctgagaggtatccaatg 103567 Query: 722 acaggaatggttcttaatggcaaggcagtttgctgtatgcatatggggagctttgaggag 781 ||| | ||||| | ||| |||| ||||||||||||||||| ||||| | ||||| || Sbjct: 103568 acatgcttggttttgaatagcaaagcagtttgctgtatgcaaatgggtaattttgatgaa 103627 Query: 782 gctgaaactctattgcttgaagccctaaacaagg 815 |||||| | ||| |||||||||| || ||||||| Sbjct: 103628 gctgaatcactactgcttgaagcactcaacaagg 103661 Score = 48.1 bits (24), Expect = 0.074 Identities = 45/52 (86%) Strand = Plus / Plus Query: 531 tgaacgtccagatcttccttaagatgcaccgctcagattatgctgacaagca 582 |||| |||||||| ||| ||||||||||| | |||||||| ||||| ||||| Sbjct: 103306 tgaatgtccagatattcattaagatgcacagatcagattacgctgagaagca 103357 Score = 44.1 bits (22), Expect = 1.2 Identities = 103/130 (79%) Strand = Plus / Plus Query: 390 tgaaggaatggttgagtgattcagccataggaagcaatcctgttctgcgattgattgctg 449 |||||||||||||| |||||| | ||||||| |||| || | || | |||||||||| Sbjct: 103071 tgaaggaatggttggcagattcaacaataggaaacaatgctatcttgaggttgattgctg 103130 Query: 450 gaattatatttatgcatgagcaagactacaacgaggctctcaagcacacacatactgggg 509 | | ||| || ||||||||| |||| || || || ||||| || ||||| ||| |||| | Sbjct: 103131 gtactattttcatgcatgaggaagattataatgaagctctgaaacacactcatgctggag 103190 Query: 510 gaactctgga 519 ||||| |||| Sbjct: 103191 gaactatgga 103200
>gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5I8 sequence, complete sequence Length = 96183 Score = 71.9 bits (36), Expect = 5e-09 Identities = 114/140 (81%) Strand = Plus / Minus Query: 676 ggaagcttatctcatattccaggactttgctgagaagtaccctatgacaggaatggttct 735 |||||||||||| || |||||||| || ||||||||||||| |||||| | || | | Sbjct: 34400 ggaagcttatctaatcttccaggatttctctgagaagtacccaatgacaagcttgatctt 34341 Query: 736 taatggcaaggcagtttgctgtatgcatatggggagctttgaggaggctgaaactctatt 795 || ||||| ||||||||||| ||||||||||| | ||||| || ||||| |||||| | Sbjct: 34340 gaacggcaaagcagtttgctgcatgcatatgggtaattttgaagaagctgagactctact 34281 Query: 796 gcttgaagccctaaacaagg 815 |||||||| || ||||||| Sbjct: 34280 acttgaagcactcaacaagg 34261 Score = 67.9 bits (34), Expect = 8e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 440 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacaca 499 ||||||||||| | |||||| ||||||||| ||||||| || |||||||| |||||||| Sbjct: 34812 ttgattgctggtactatattcatgcatgaggaagactataatgaggctctgaagcacact 34753 Query: 500 catactgggggaac 513 ||| |||| ||||| Sbjct: 34752 cattctggaggaac 34739
>dbj|AB042114.1| Glycine max cope2 mRNA for epsilon2-COP, partial cds Length = 1223 Score = 71.9 bits (36), Expect = 5e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 737 aatggcaaggcagtttgctgtatgcatatggggagctttgaggaggctgaaactctattg 796 ||||||||||| |||||||| ||||| ||||| | ||| || || || || || || ||| Sbjct: 613 aatggcaaggctgtttgctgcatgcacatgggcaacttcgacgaagccgagacccttttg 672 Query: 797 cttgaagccctaaacaaggacgcaaaggatcctgaaactcttgccaatcttattgtatgt 856 ||||||| ||||||||||| || | |||||| |||||||| |||||||| ||||||| Sbjct: 673 gttgaagctctaaacaaggatgccagggatccagaaactctagccaatctagttgtatgc 732 Query: 857 aatctccaccttggcaaacc 876 ||| ||||| |||||||| Sbjct: 733 tgtcttcacctcggcaaacc 752
>emb|CT988657.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 427 Score = 69.9 bits (35), Expect = 2e-08 Identities = 206/263 (78%) Strand = Plus / Plus Query: 566 gattatgctgacaagcaactgaagatcatgcaacaaactgacgaggaccatacactgaca 625 ||||||||||| || || || | |||||||||||| | ||| ||||| || |||| || Sbjct: 26 gattatgctgagaaacagctaaggatcatgcaacagattgatgaggatcactcactaact 85 Query: 626 caactagcaaatgcttggcttgatatcgctgttggcggctctaagatccgggaagcttat 685 ||||| |||||||| ||||| | || ||||| || || | ||||| | |||||| ||| Sbjct: 86 caacttgcaaatgcatggctatacatggctgtgggtggtgccaagatacaggaagcatat 145 Query: 686 ctcatattccaggactttgctgagaagtaccctatgacaggaatggttcttaatggcaag 745 ||||| ||||| || || |||||||||| | ||||||||| || | | ||||| ||| Sbjct: 146 ctcattttccaagatttctctgagaagtatcagatgacaggattgatattgaatgggaag 205 Query: 746 gcagtttgctgtatgcatatggggagctttgaggaggctgaaactctattgcttgaagcc 805 || |||||||| ||||| ||||| | ||||| || |||||||| | ||||||||||| Sbjct: 206 gctgtttgctgcatgcacatgggaaattttgatgaagctgaaaccttgttgcttgaagct 265 Query: 806 ctaaacaaggacgcaaaggatcc 828 | || ||||| ||||||||||| Sbjct: 266 ttgaataaggatgcaaaggatcc 288
>emb|AJ866984.1| Medicago truncatula mRNA for coatomer epsilon subunit (cope1 gene) Length = 870 Score = 69.9 bits (35), Expect = 2e-08 Identities = 98/119 (82%) Strand = Plus / Plus Query: 737 aatggcaaggcagtttgctgtatgcatatggggagctttgaggaggctgaaactctattg 796 ||||||||||| |||||||| ||||| ||||| | |||||| || ||||| ||||| ||| Sbjct: 619 aatggcaaggctgtttgctgcatgcaaatgggtaactttgatgaagctgagactcttttg 678 Query: 797 cttgaagccctaaacaaggacgcaaaggatcctgaaactcttgccaatcttattgtatg 855 | ||||| || |||||||| || | |||||| ||||| || || |||||| ||||||| Sbjct: 679 gtggaagcactcaacaaggatgctagggatccagaaacactggcaaatcttgttgtatg 737 Score = 52.0 bits (26), Expect = 0.005 Identities = 53/62 (85%) Strand = Plus / Plus Query: 143 ctcttcaacctgcgcaacctcttctacctcggcgcctaccagtccgccatcaacaacagc 202 ||||||||||| |||||| ||||||||||||||| ||||| | || ||||||| |||| Sbjct: 19 ctcttcaacctccgcaacaacttctacctcggcgcataccaagctgcaatcaacagcagc 78 Query: 203 ga 204 || Sbjct: 79 ga 80
>ref|NM_001060595.1| Oryza sativa (japonica cultivar-group) Os04g0644700 (Os04g0644700) mRNA, complete cds Length = 894 Score = 65.9 bits (33), Expect = 3e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 233 gccgagcgcgacgtcatcgtcttccgctcctacatcgccctcggatcctaccagctggtg 292 |||||||||||| | || ||| |||||||||||||||| |||| ||| ||||||||||| Sbjct: 130 gccgagcgcgactccctcctctaccgctcctacatcgccatcggctcccaccagctggtg 189 Query: 293 atcagcgagatcg 305 ||| |||||||| Sbjct: 190 atcgacgagatcg 202
>emb|CT988528.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 392 Score = 58.0 bits (29), Expect = 8e-05 Identities = 122/153 (79%) Strand = Plus / Minus Query: 676 ggaagcttatctcatattccaggactttgctgagaagtaccctatgacaggaatggttct 735 |||||| |||||||| ||||| || || |||||||||| | ||||||||| || | | Sbjct: 297 ggaagcatatctcattttccaagatttctctgagaagtatcagatgacaggattgatatt 238 Query: 736 taatggcaaggcagtttgctgtatgcatatggggagctttgaggaggctgaaactctatt 795 ||||| ||||| |||||||| ||||| ||||| | ||||| || |||||||| | || Sbjct: 237 gaatgggaaggctgtttgctgcatgcacatgggaaattttgatgaagctgaaaccttgtt 178 Query: 796 gcttgaagccctaaacaaggacgcaaaggatcc 828 ||||||||| | || ||||| ||||||||||| Sbjct: 177 gcttgaagctttgaataaggatgcaaaggatcc 145
>gb|AC149424.1| Populus trichocarpa clone Pop1-011N15, complete sequence Length = 152544 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Minus Query: 440 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacac 498 |||||||||||||| ||||| ||||||||| | || ||||| |||||||| || ||||| Sbjct: 120897 ttgattgctggaatcatattaatgcatgaggaggattacaatgaggctctgaaacacac 120839
>gb|AC149297.1| Populus trichocarpa clone Pop1-015H07, complete sequence Length = 131790 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Minus Query: 440 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacac 498 |||||||||||||| ||||| ||||||||| | || ||||| |||||||| || ||||| Sbjct: 5324 ttgattgctggaatcatattaatgcatgaggaggattacaatgaggctctgaaacacac 5266
>gb|AC149295.1| Populus trichocarpa clone Pop1-008L01, complete sequence Length = 101981 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Minus Query: 440 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacac 498 |||||||||||||| ||||| ||||||||| | || ||||| |||||||| || ||||| Sbjct: 71706 ttgattgctggaatcatattaatgcatgaggaggattacaatgaggctctgaaacacac 71648
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 52.0 bits (26), Expect = 0.005 Identities = 65/78 (83%) Strand = Plus / Minus Query: 192 tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 251 ||||||||||||| ||||| | |||| ||||| |||||| | | |||||| || ||||| Sbjct: 13531105 tcaacaacagcgatgtccctgacctcaccgccgccgccgccgacaagcgcggcgccatcg 13531046 Query: 252 tcttccgctcctacatcg 269 |||||| ||||| ||||| Sbjct: 13531045 tcttccactcctgcatcg 13531028
>dbj|AP005865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0037J12 Length = 118553 Score = 52.0 bits (26), Expect = 0.005 Identities = 65/78 (83%) Strand = Plus / Minus Query: 192 tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 251 ||||||||||||| ||||| | |||| ||||| |||||| | | |||||| || ||||| Sbjct: 46410 tcaacaacagcgatgtccctgacctcaccgccgccgccgccgacaagcgcggcgccatcg 46351 Query: 252 tcttccgctcctacatcg 269 |||||| ||||| ||||| Sbjct: 46350 tcttccactcctgcatcg 46333
>dbj|AP004177.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_E03 Length = 126845 Score = 52.0 bits (26), Expect = 0.005 Identities = 65/78 (83%) Strand = Plus / Minus Query: 192 tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 251 ||||||||||||| ||||| | |||| ||||| |||||| | | |||||| || ||||| Sbjct: 117034 tcaacaacagcgatgtccctgacctcaccgccgccgccgccgacaagcgcggcgccatcg 116975 Query: 252 tcttccgctcctacatcg 269 |||||| ||||| ||||| Sbjct: 116974 tcttccactcctgcatcg 116957
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 48.1 bits (24), Expect = 0.074 Identities = 24/24 (100%) Strand = Plus / Minus Query: 220 cgccgacgccgcggccgagcgcga 243 |||||||||||||||||||||||| Sbjct: 2065829 cgccgacgccgcggccgagcgcga 2065806
>gb|AC190304.4| Rhesus Macaque BAC CH250-294D15 () complete sequence Length = 166724 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1058 tgaattgtattggtttttgctttatattgtt 1088 ||||||| ||| ||||||||||||||||||| Sbjct: 29016 tgaattgcattcgtttttgctttatattgtt 28986
>gb|AC113266.24| Papio anubis clone rp41-106a4, complete sequence Length = 193032 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1058 tgaattgtattggtttttgctttatattgtt 1088 ||||||| ||| ||||||||||||||||||| Sbjct: 155437 tgaattgaattcgtttttgctttatattgtt 155467
>gb|AE010372.1| Methanopyrus kandleri AV19 section 71 of 157 of the complete genome Length = 12580 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Plus Query: 937 caccacgtcggcggaggataact 959 ||||||||||||||||||||||| Sbjct: 6166 caccacgtcggcggaggataact 6188
>emb|CT829369.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA056N06, full insert sequence Length = 1536 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 308 tcgtcggcggcgacgtcgctgc 329 |||||||||||||||||||||| Sbjct: 109 tcgtcggcggcgacgtcgctgc 130
>ref|NM_001067199.1| Oryza sativa (japonica cultivar-group) Os07g0683200 (Os07g0683200) mRNA, partial cds Length = 1650 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 308 tcgtcggcggcgacgtcgctgc 329 |||||||||||||||||||||| Sbjct: 120 tcgtcggcggcgacgtcgctgc 141
>emb|AL732331.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0413E07, complete sequence Length = 76546 Score = 44.1 bits (22), Expect = 1.2 Identities = 46/54 (85%) Strand = Plus / Plus Query: 233 gccgagcgcgacgtcatcgtcttccgctcctacatcgccctcggatcctaccag 286 |||||||||||| | || ||| |||||||||||||||| |||| ||| ||||| Sbjct: 46933 gccgagcgcgactccctcctctaccgctcctacatcgccatcggctcccaccag 46986
>gb|AC150687.3| Bos taurus BAC CH240-243M2 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 144223 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1067 ttggtttttgctttatattgtt 1088 |||||||||||||||||||||| Sbjct: 58853 ttggtttttgctttatattgtt 58832
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 308 tcgtcggcggcgacgtcgctgc 329 |||||||||||||||||||||| Sbjct: 28932343 tcgtcggcggcgacgtcgctgc 28932364
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 cgacgccgacgccgcggccgagcgcg 242 |||||||| ||||||||||||||||| Sbjct: 4937907 cgacgccgtcgccgcggccgagcgcg 4937882 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 211 gggcctcgacgccgacgccgcggccg 236 ||||||||||||||||| |||||||| Sbjct: 8902964 gggcctcgacgccgacggcgcggccg 8902989
>ref|NM_001006339.1| Gallus gallus coatomer protein complex, subunit epsilon (COPE), mRNA emb|AJ720775.1| Gallus gallus mRNA for hypothetical protein, clone 25f12 Length = 1286 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 163 cttctacctcggcgcctaccagtccgccatcaac 196 ||||||| |||| ||||||||| ||||||||||| Sbjct: 118 cttctacatcggggcctaccaggccgccatcaac 151
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 308 tcgtcggcggcgacgtcgctgc 329 |||||||||||||||||||||| Sbjct: 49880 tcgtcggcggcgacgtcgctgc 49901
>gb|AC106742.3| Homo sapiens chromosome 16 clone RP11-1136G4, complete sequence Length = 145009 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 395 gaatggttgagtgattcagcca 416 |||||||||||||||||||||| Sbjct: 40373 gaatggttgagtgattcagcca 40352
>dbj|AK068606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157G23, full insert sequence Length = 1650 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 308 tcgtcggcggcgacgtcgctgc 329 |||||||||||||||||||||| Sbjct: 120 tcgtcggcggcgacgtcgctgc 141
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 289 ggtgatcagcgagatcgactcg 310 |||||||||||||||||||||| Sbjct: 497344 ggtgatcagcgagatcgactcg 497323
>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05, complete sequence Length = 142556 Score = 44.1 bits (22), Expect = 1.2 Identities = 46/54 (85%) Strand = Plus / Plus Query: 233 gccgagcgcgacgtcatcgtcttccgctcctacatcgccctcggatcctaccag 286 |||||||||||| | || ||| |||||||||||||||| |||| ||| ||||| Sbjct: 113930 gccgagcgcgactccctcctctaccgctcctacatcgccatcggctcccaccag 113983
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 cgacgccgacgccgcggccga 237 ||||||||||||||||||||| Sbjct: 3106619 cgacgccgacgccgcggccga 3106599
>ref|XM_001220877.1| Chaetomium globosum CBS 148.51 conserved hypothetical protein (CHGG_01657) mRNA, complete cds Length = 2316 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 gactcgtcggcggcgacgtcg 325 ||||||||||||||||||||| Sbjct: 1850 gactcgtcggcggcgacgtcg 1830
>emb|CR854837.11| Zebrafish DNA sequence from clone DKEYP-19H2 in linkage group 23, complete sequence Length = 27353 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1067 ttggtttttgctttatattgttcta 1091 |||||||||||||||| |||||||| Sbjct: 16429 ttggtttttgctttattttgttcta 16453
>emb|CT573201.14| Zebrafish DNA sequence from clone CH211-85A16 in linkage group 18, complete sequence Length = 68817 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 ggaatggttgagtgattcagc 414 ||||||||||||||||||||| Sbjct: 50449 ggaatggttgagtgattcagc 50429
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 cgggcctcgacgccgacgccg 230 ||||||||||||||||||||| Sbjct: 4180667 cgggcctcgacgccgacgccg 4180687
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 acgccgcggccgagcgcgacg 245 ||||||||||||||||||||| Sbjct: 1816506 acgccgcggccgagcgcgacg 1816486
>gb|DQ182118.1| Uncultured bacterium clone SRP17 putative nitrite reductase (nirS) gene, partial cds Length = 410 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 gatcagcgagatcgactcgtc 312 ||||||||||||||||||||| Sbjct: 309 gatcagcgagatcgactcgtc 289
>gb|AC100212.8| Mus musculus chromosome 18, clone RP23-60D22, complete sequence Length = 225698 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 582 aactgaagatcatgcaacaaa 602 ||||||||||||||||||||| Sbjct: 30876 aactgaagatcatgcaacaaa 30856
>ref|XM_502196.1| Yarrowia lipolytica CLIB122, YALI0C23793g predicted mRNA Length = 1437 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 859 tctccaccttggcaaaccgtc 879 ||||||||||||||||||||| Sbjct: 478 tctccaccttggcaaaccgtc 458
>ref|XM_807142.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509895.100) partial mRNA Length = 1464 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 809 aacaaggacgcaaaggatcct 829 ||||||||||||||||||||| Sbjct: 901 aacaaggacgcaaaggatcct 921
>ref|XM_802105.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507277.10) partial mRNA Length = 1476 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 809 aacaaggacgcaaaggatcct 829 ||||||||||||||||||||| Sbjct: 901 aacaaggacgcaaaggatcct 921
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 cctgcgcaacctcttctacct 171 ||||||||||||||||||||| Sbjct: 2146009 cctgcgcaacctcttctacct 2145989
>emb|AL355885.4|CNS05TCW Human chromosome 14 DNA sequence BAC R-434O22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 174442 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 443 attgctggaattatatttatg 463 ||||||||||||||||||||| Sbjct: 142249 attgctggaattatatttatg 142269
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 859 tctccaccttggcaaaccgtc 879 ||||||||||||||||||||| Sbjct: 3189526 tctccaccttggcaaaccgtc 3189546
>emb|AL121603.4|CNS01DS0 Human chromosome 14 DNA sequence BAC R-73E17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 141534 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 443 attgctggaattatatttatg 463 ||||||||||||||||||||| Sbjct: 26191 attgctggaattatatttatg 26211 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 194,666,992 Number of extensions: 10758472 Number of successful extensions: 201572 Number of sequences better than 10.0: 78 Number of HSP's gapped: 201559 Number of HSP's successfully gapped: 122 Length of query: 1203 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1180 Effective length of database: 18,503,978,556 Effective search space: 21834694696080 Effective search space used: 21834694696080 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
