ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf85b18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK121866:Os02g0130100 434 e-122
2AK119945: 135 4e-32
3AK073854:Os03g0256400 41 0.001
4AK100753:Os04g0671700 32 0.90
5Os01g0956800:Os01g0956800 30 4.4
6AK105595:Os01g0235400 30 4.4
7AK108641:Os05g0477100 29 7.6
8AK065948:Os02g0778200 29 7.6
9Os06g0711700:Os06g0711700 28 9.9

>AK121866:Os02g0130100 |
          Length = 255
 Score =  434 bits (1116), Expect = e-122
 Identities = 217/255 (85%), Positives = 228/255 (89%)
 Frame = +1

Query: 166 MAVVGVLALQGSYNEHMSALRRIGVKGVEVRKPEQLQGIDSLIIPGGESTTMAKLANYHN 345
           MAVVGVLALQGS+NEH++ALRRIGV+GVEVRKPEQLQG+DSLIIPGGESTTMAKLANYHN
Sbjct: 1   MAVVGVLALQGSFNEHLAALRRIGVRGVEVRKPEQLQGLDSLIIPGGESTTMAKLANYHN 60

Query: 346 LFPALREFVGAGKPVWGTCAGLIFLANKAVGQKSGGQELIGGLDCTVHRNFFGSQQQSFE 525
           LFPALREFVG G+PVWGTCAGLIFLANKAVGQKSGGQELIGGLDCTVHRNFFGSQ QSFE
Sbjct: 61  LFPALREFVGTGRPVWGTCAGLIFLANKAVGQKSGGQELIGGLDCTVHRNFFGSQLQSFE 120

Query: 526 TELSVPMLAEKEGGSNTCRGVFIRAPAILEVGSDVEILADCPVPSGKPSITIPSSMGVEE 705
           TELSVPMLAEKEGGS+TCRGVFIRAPAIL+VGS+VE+LADCPVPS +PSITI S  GVEE
Sbjct: 121 TELSVPMLAEKEGGSDTCRGVFIRAPAILDVGSNVEVLADCPVPSDRPSITIASGEGVEE 180

Query: 706 EVYSKDRVIVAVRQGNILATAFHPELTSDCRWHRFFLDMDKESHPKAFCAXXXXXXXXXX 885
           EVYSKDRVIVAVRQGNILATAFHPELTSD RWHRFFLDMDKES  KAF A          
Sbjct: 181 EVYSKDRVIVAVRQGNILATAFHPELTSDSRWHRFFLDMDKESDTKAFSALSLSSSSRDT 240

Query: 886 XXXXMTKPFDLPIFE 930
                 KP DLPIFE
Sbjct: 241 QDGSKNKPLDLPIFE 255



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>AK119945: |
          Length = 361

 Score =  135 bits (341), Expect = 4e-32
 Identities = 81/176 (46%), Positives = 109/176 (61%), Gaps = 9/176 (5%)
 Frame = +1

Query: 175 VGVLALQGSYNEHMSALRRIG-------VKGVEVRKPEQLQGIDSLIIPGGESTTMAKLA 333
           VGVLA+QG++ EH S + R+        ++   VR PEQL   D+LIIPGGEST ++   
Sbjct: 36  VGVLAIQGAFREHASHINRLNTLYPLETIRSTLVRTPEQLGECDALIIPGGESTAISLGC 95

Query: 334 NYHNLFPALREFVGAGKPVWGTCAGLIFLANKAVGQKSGGQELIGGLDCTVHRNFFGSQQ 513
               L   LR++V AG+PVWGTCAG+I LA +A G K GGQ+LIGG+D  V RN FG+Q 
Sbjct: 96  ERIGLLEPLRQWVRAGRPVWGTCAGMIMLAREASGGKKGGQQLIGGVDVRVGRNGFGTQV 155

Query: 514 QSFETELSVPMLAEKEGGSNTCRGVFIRAPAI--LEVGSDVEILADCPVPSGKPSI 675
            SFET L +  L ++   S    GVFIRAP +  L + +D+E      VP  +P++
Sbjct: 156 DSFETGLEIHGLDKQ---SEPFNGVFIRAPVVDALLLPTDLE-----KVPVDQPTL 203



 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 30/75 (40%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
 Frame = +1

Query: 628 VEILADCPVPSGKPSITIPSSMGVEEEVYSKD------------RVIVAVRQGNILATAF 771
           +EILA  P P   P    P++  V      +D              IVA+RQGNIL T+F
Sbjct: 277 IEILATLPQPVTPPKS--PANQPVASSASQRDPRLDLPRRPDHDSQIVALRQGNILMTSF 334

Query: 772 HPELTSDCRWHRFFL 816
           HPELT D R H  F+
Sbjct: 335 HPELTPDTRLHNLFV 349



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>AK073854:Os03g0256400 |
          Length = 568

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 52/208 (25%), Positives = 81/208 (38%), Gaps = 13/208 (6%)
 Frame = +1

Query: 196 GSYNEHMSALRRIGVKGVEVRKPEQLQGIDSLIIPG-GESTTMAKLANYHNLFPALREFV 372
           G+     +A+R +G    +VR PE +   D L+ PG G   +   +     +  ALRE++
Sbjct: 48  GNVRSVRNAIRHLGFGIRDVRSPEDILAADRLVFPGVGAFGSAMDVLTRSGMADALREYI 107

Query: 373 GAGKPVWGTCAGLIFLANKAVGQKSGGQELIGGLDCTVHRNFFGSQQQSFETELSVPMLA 552
              +P  G C GL  L + +  +++G    +G +   V R  F S +      L VP + 
Sbjct: 108 RRDRPFLGICLGLQLLFDSS--EENGPISGLGVIPGVVRR--FDSSK-----GLIVPHI- 157

Query: 553 EKEGGSNTCRGVFIRAPAILEVGSDVEILADC------------PVPSGKPSITIPSSMG 696
               G N            LE+  D ++L                +PS +    I S   
Sbjct: 158 ----GWNA-----------LEITKDTQLLKGAEGHHVYFVHSYHALPSDENKEWISSVCN 202

Query: 697 VEEEVYSKDRVIVAVRQGNILATAFHPE 780
             E   S      ++  GNI A  FHPE
Sbjct: 203 YGESFIS------SISMGNIQAVQFHPE 224



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>AK100753:Os04g0671700 |
          Length = 387

 Score = 32.0 bits (71), Expect = 0.90
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +1

Query: 283 DSLIIPGGESTTMAKLANYHNLFPALREFVGAGKPVWGTCAGLIFLANKAVGQ 441
           D L+IPGG +     LA    +   +R+F  A KP+   C G + LA   V Q
Sbjct: 82  DGLVIPGGRAPEY--LAMDEKVLDLVRKFSDAKKPIASVCHGQLILAAAGVVQ 132



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>Os01g0956800:Os01g0956800 |
          Length = 930

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = -1

Query: 901 SLNGLRNLLKTTIEIAHRRPLDGILCPCPRR---SDAIYSLTSILGEKRW 761
           SL  L N    ++++      D   CP  RR     AI  L S++GEK W
Sbjct: 807 SLPSLENFCNFSLDLPSLEYFDVFACPKLRRLPFGHAIVKLKSVMGEKTW 856



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>AK105595:Os01g0235400 |
          Length = 542

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 24/71 (33%), Positives = 31/71 (43%)
 Frame = +2

Query: 752 ISSPPLFTQN*RQTVDGIASSWTWTKNPIQRPSVRYLYRRLQEIPKAVQ*LSLLIFPYLN 931
           +S PPL +QN  Q    + S+ TW + P     VR L   L++IP              N
Sbjct: 244 LSRPPL-SQNYMQLFGVLLSNATWDRPPCVPALVRLLRAFLRKIP--------------N 288

Query: 932 SSQPGGRLPNI 964
                GRLPNI
Sbjct: 289 ELNQEGRLPNI 299



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>AK108641:Os05g0477100 |
          Length = 242

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = -3

Query: 722 SLEYTSSSTPMEDGMVMLGLPEGTGQSASISTSDPTSKIAGARINTPRHVLLPPSFS 552
           +L   SSS+     M+M      T  S + S+S P++ +A  R +TPR   LP + S
Sbjct: 123 TLSGVSSSSSAPRSMIMSASDVITLTSTAASSSGPSTVVARRRNSTPRPPSLPMNMS 179



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>AK065948:Os02g0778200 |
          Length = 1058

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 332 ASLAMVVLSPPGMMSESMPCSCSGLRTSTPFT 237
           A+  +  LS PG++ E +P  C  + T+TP+T
Sbjct: 279 AAFKITNLSKPGLLEEFLPNLCLAIWTTTPWT 310



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>Os06g0711700:Os06g0711700 |
          Length = 436

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +3

Query: 444 IGRSGAYWGARLHRPPELFWKPAAKL*NRTFSANA 548
           + RSGA W      PP   W+P   L +  FS +A
Sbjct: 238 VARSGATWDPAASPPPAAAWEPIPPLRDGRFSRDA 272


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 33,583,324
Number of extensions: 795612
Number of successful extensions: 2417
Number of sequences better than 10.0: 9
Number of HSP's gapped: 2414
Number of HSP's successfully gapped: 10
Length of query: 401
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 298
Effective length of database: 11,275,632
Effective search space: 3360138336
Effective search space used: 3360138336
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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