| Clone Name | FLbaf87j22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 149 bits (75), Expect = 3e-32 Identities = 111/123 (90%) Strand = Plus / Plus Query: 418 caagctcccactggaagagaagcagaagtactcaaacttggtgaacggcgacgaagtcag 477 ||||||||||||||||||||||||||||||||| ||| ||||||||||| | || |||| Sbjct: 3858059 caagctcccactggaagagaagcagaagtactccaacctggtgaacggcaaggatttcag 3858118 Query: 478 gatcgaaggttacgggaacgacatggtcgtatcagagaagcagatcctggactggtgtga 537 ||||||||| ||||| |||||||||||||| |||||||| ||||||||| ||||||| || Sbjct: 3858119 gatcgaagggtacggcaacgacatggtcgtgtcagagaaacagatcctgaactggtgcga 3858178 Query: 538 ccg 540 ||| Sbjct: 3858179 ccg 3858181 Score = 149 bits (75), Expect = 3e-32 Identities = 111/123 (90%) Strand = Plus / Plus Query: 418 caagctcccactggaagagaagcagaagtactcaaacttggtgaacggcgacgaagtcag 477 ||||||||||||||||||||||||||||||||| ||| ||||||||||| | || |||| Sbjct: 3907938 caagctcccactggaagagaagcagaagtactccaacctggtgaacggcaaggatttcag 3907997 Query: 478 gatcgaaggttacgggaacgacatggtcgtatcagagaagcagatcctggactggtgtga 537 ||||||||| ||||| |||||||||||||| |||||||| ||||||||| ||||||| || Sbjct: 3907998 gatcgaagggtacggcaacgacatggtcgtgtcagagaaacagatcctgaactggtgcga 3908057 Query: 538 ccg 540 ||| Sbjct: 3908058 ccg 3908060 Score = 56.0 bits (28), Expect = 3e-04 Identities = 118/148 (79%) Strand = Plus / Plus Query: 143 gtcaagatacccccgatcgtgcaggagctggcgaccggcgtgcaagagccaccgagccgg 202 ||||||||||| ||||| ||||||||||| || ||||||| || ||||| ||||||| | Sbjct: 3857453 gtcaagataccgccgattgtgcaggagctcgccgccggcgtccatgagccgccgagccag 3857512 Query: 203 tatgtgatcgctgagcacaaccgccccgccgtggctgcttctgagatgcctgatccgata 262 || || ||| ||| | ||||||| ||| | || | || || |||||||| || || Sbjct: 3857513 tacatggtcggcgagaaagaccgccctgccatcgccggctccgacatgcctgagcccatc 3857572 Query: 263 cccatcgtcgatctcagccggctgtctg 290 ||| ||||||| |||||||||||||||| Sbjct: 3857573 cccgtcgtcgacctcagccggctgtctg 3857600 Score = 56.0 bits (28), Expect = 3e-04 Identities = 118/148 (79%) Strand = Plus / Plus Query: 143 gtcaagatacccccgatcgtgcaggagctggcgaccggcgtgcaagagccaccgagccgg 202 ||||||||||| ||||| ||||||||||| || ||||||| || ||||| ||||||| | Sbjct: 3907332 gtcaagataccgccgattgtgcaggagctcgccgccggcgtccatgagccgccgagccag 3907391 Query: 203 tatgtgatcgctgagcacaaccgccccgccgtggctgcttctgagatgcctgatccgata 262 || || ||| ||| | ||||||| ||| | || | || || |||||||| || || Sbjct: 3907392 tacatggtcggcgagaaagaccgccctgccatcgccggctccgacatgcctgagcccatc 3907451 Query: 263 cccatcgtcgatctcagccggctgtctg 290 ||| ||||||| |||||||||||||||| Sbjct: 3907452 cccgtcgtcgacctcagccggctgtctg 3907479 Score = 50.1 bits (25), Expect = 0.021 Identities = 43/49 (87%) Strand = Plus / Plus Query: 305 gaggttgccaagctgcggtctgccttggagaactggggcctgttcctgg 353 |||| ||||||||||||||| || || ||||||||||||| ||||||| Sbjct: 3911577 gaggctgccaagctgcggtcggctctgcagaactggggcctcttcctgg 3911625 Score = 48.1 bits (24), Expect = 0.083 Identities = 108/136 (79%) Strand = Plus / Plus Query: 939 agataatgagcaatggattcttcaagagcccgattcacagggttgtgaccaatgcagaga 998 |||||||||||||||| || || ||||||||| | || ||||| ||||| || || |||| Sbjct: 3859207 agataatgagcaatgggttgttaaagagcccggtgcatagggtggtgacgaacgccgaga 3859266 Query: 999 aagagcggttatctttggtgatgttctacacgatgaaccctgagaaggagattgagccac 1058 ||||| | || |||||||||||||| || || | || ||||||||| | ||||| Sbjct: 3859267 gggagcgagtgtcggtggtgatgttctacgcgctggatccggagaaggagctggagccgg 3859326 Query: 1059 tgccagagctggtgga 1074 ||| ||||||||||| Sbjct: 3859327 cgccggagctggtgga 3859342 Score = 48.1 bits (24), Expect = 0.083 Identities = 108/136 (79%) Strand = Plus / Plus Query: 939 agataatgagcaatggattcttcaagagcccgattcacagggttgtgaccaatgcagaga 998 |||||||||||||||| || || ||||||||| | || ||||| ||||| || || |||| Sbjct: 3909086 agataatgagcaatgggttgttaaagagcccggtgcatagggtggtgacgaacgccgaga 3909145 Query: 999 aagagcggttatctttggtgatgttctacacgatgaaccctgagaaggagattgagccac 1058 ||||| | || |||||||||||||| || || | || ||||||||| | ||||| Sbjct: 3909146 gggagcgagtgtcggtggtgatgttctacgcgctggatccggagaaggagctggagccgg 3909205 Query: 1059 tgccagagctggtgga 1074 ||| ||||||||||| Sbjct: 3909206 cgccggagctggtgga 3909221 Score = 48.1 bits (24), Expect = 0.083 Identities = 27/28 (96%) Strand = Plus / Plus Query: 177 ccggcgtgcaagagccaccgagccggta 204 |||||||||| ||||||||||||||||| Sbjct: 3911446 ccggcgtgcaggagccaccgagccggta 3911473
>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0035I03 Length = 153749 Score = 149 bits (75), Expect = 3e-32 Identities = 111/123 (90%) Strand = Plus / Plus Query: 418 caagctcccactggaagagaagcagaagtactcaaacttggtgaacggcgacgaagtcag 477 ||||||||||||||||||||||||||||||||| ||| ||||||||||| | || |||| Sbjct: 13814 caagctcccactggaagagaagcagaagtactccaacctggtgaacggcaaggatttcag 13873 Query: 478 gatcgaaggttacgggaacgacatggtcgtatcagagaagcagatcctggactggtgtga 537 ||||||||| ||||| |||||||||||||| |||||||| ||||||||| ||||||| || Sbjct: 13874 gatcgaagggtacggcaacgacatggtcgtgtcagagaaacagatcctgaactggtgcga 13933 Query: 538 ccg 540 ||| Sbjct: 13934 ccg 13936 Score = 56.0 bits (28), Expect = 3e-04 Identities = 118/148 (79%) Strand = Plus / Plus Query: 143 gtcaagatacccccgatcgtgcaggagctggcgaccggcgtgcaagagccaccgagccgg 202 ||||||||||| ||||| ||||||||||| || ||||||| || ||||| ||||||| | Sbjct: 13208 gtcaagataccgccgattgtgcaggagctcgccgccggcgtccatgagccgccgagccag 13267 Query: 203 tatgtgatcgctgagcacaaccgccccgccgtggctgcttctgagatgcctgatccgata 262 || || ||| ||| | ||||||| ||| | || | || || |||||||| || || Sbjct: 13268 tacatggtcggcgagaaagaccgccctgccatcgccggctccgacatgcctgagcccatc 13327 Query: 263 cccatcgtcgatctcagccggctgtctg 290 ||| ||||||| |||||||||||||||| Sbjct: 13328 cccgtcgtcgacctcagccggctgtctg 13355 Score = 50.1 bits (25), Expect = 0.021 Identities = 43/49 (87%) Strand = Plus / Plus Query: 305 gaggttgccaagctgcggtctgccttggagaactggggcctgttcctgg 353 |||| ||||||||||||||| || || ||||||||||||| ||||||| Sbjct: 17453 gaggctgccaagctgcggtcggctctgcagaactggggcctcttcctgg 17501 Score = 48.1 bits (24), Expect = 0.083 Identities = 108/136 (79%) Strand = Plus / Plus Query: 939 agataatgagcaatggattcttcaagagcccgattcacagggttgtgaccaatgcagaga 998 |||||||||||||||| || || ||||||||| | || ||||| ||||| || || |||| Sbjct: 14962 agataatgagcaatgggttgttaaagagcccggtgcatagggtggtgacgaacgccgaga 15021 Query: 999 aagagcggttatctttggtgatgttctacacgatgaaccctgagaaggagattgagccac 1058 ||||| | || |||||||||||||| || || | || ||||||||| | ||||| Sbjct: 15022 gggagcgagtgtcggtggtgatgttctacgcgctggatccggagaaggagctggagccgg 15081 Query: 1059 tgccagagctggtgga 1074 ||| ||||||||||| Sbjct: 15082 cgccggagctggtgga 15097 Score = 48.1 bits (24), Expect = 0.083 Identities = 27/28 (96%) Strand = Plus / Plus Query: 177 ccggcgtgcaagagccaccgagccggta 204 |||||||||| ||||||||||||||||| Sbjct: 17322 ccggcgtgcaggagccaccgagccggta 17349
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0015E04 Length = 152046 Score = 149 bits (75), Expect = 3e-32 Identities = 111/123 (90%) Strand = Plus / Plus Query: 418 caagctcccactggaagagaagcagaagtactcaaacttggtgaacggcgacgaagtcag 477 ||||||||||||||||||||||||||||||||| ||| ||||||||||| | || |||| Sbjct: 116013 caagctcccactggaagagaagcagaagtactccaacctggtgaacggcaaggatttcag 116072 Query: 478 gatcgaaggttacgggaacgacatggtcgtatcagagaagcagatcctggactggtgtga 537 ||||||||| ||||| |||||||||||||| |||||||| ||||||||| ||||||| || Sbjct: 116073 gatcgaagggtacggcaacgacatggtcgtgtcagagaaacagatcctgaactggtgcga 116132 Query: 538 ccg 540 ||| Sbjct: 116133 ccg 116135 Score = 56.0 bits (28), Expect = 3e-04 Identities = 118/148 (79%) Strand = Plus / Plus Query: 143 gtcaagatacccccgatcgtgcaggagctggcgaccggcgtgcaagagccaccgagccgg 202 ||||||||||| ||||| ||||||||||| || ||||||| || ||||| ||||||| | Sbjct: 115407 gtcaagataccgccgattgtgcaggagctcgccgccggcgtccatgagccgccgagccag 115466 Query: 203 tatgtgatcgctgagcacaaccgccccgccgtggctgcttctgagatgcctgatccgata 262 || || ||| ||| | ||||||| ||| | || | || || |||||||| || || Sbjct: 115467 tacatggtcggcgagaaagaccgccctgccatcgccggctccgacatgcctgagcccatc 115526 Query: 263 cccatcgtcgatctcagccggctgtctg 290 ||| ||||||| |||||||||||||||| Sbjct: 115527 cccgtcgtcgacctcagccggctgtctg 115554 Score = 48.1 bits (24), Expect = 0.083 Identities = 108/136 (79%) Strand = Plus / Plus Query: 939 agataatgagcaatggattcttcaagagcccgattcacagggttgtgaccaatgcagaga 998 |||||||||||||||| || || ||||||||| | || ||||| ||||| || || |||| Sbjct: 117161 agataatgagcaatgggttgttaaagagcccggtgcatagggtggtgacgaacgccgaga 117220 Query: 999 aagagcggttatctttggtgatgttctacacgatgaaccctgagaaggagattgagccac 1058 ||||| | || |||||||||||||| || || | || ||||||||| | ||||| Sbjct: 117221 gggagcgagtgtcggtggtgatgttctacgcgctggatccggagaaggagctggagccgg 117280 Query: 1059 tgccagagctggtgga 1074 ||| ||||||||||| Sbjct: 117281 cgccggagctggtgga 117296
>ref|NM_001063499.1| Oryza sativa (japonica cultivar-group) Os06g0178600 (Os06g0178600) mRNA, complete cds Length = 954 Score = 141 bits (71), Expect = 7e-30 Identities = 104/115 (90%) Strand = Plus / Plus Query: 418 caagctcccactggaagagaagcagaagtactcaaacttggtgaacggcgacgaagtcag 477 ||||||||||||||||||||||||||||||||| ||| ||||||||||| | || |||| Sbjct: 294 caagctcccactggaagagaagcagaagtactccaacctggtgaacggcaaggatttcag 353 Query: 478 gatcgaaggttacgggaacgacatggtcgtatcagagaagcagatcctggactgg 532 ||||||||| ||||| |||||||||||||| |||||||| ||||||||| ||||| Sbjct: 354 gatcgaagggtacggcaacgacatggtcgtgtcagagaaacagatcctgaactgg 408 Score = 61.9 bits (31), Expect = 6e-06 Identities = 121/151 (80%) Strand = Plus / Plus Query: 924 tgggagatgtaatggagataatgagcaatggattcttcaagagcccgattcacagggttg 983 |||| |||| ||||||||||||||||||||| || || ||||||||| | || ||||| | Sbjct: 686 tgggggatggaatggagataatgagcaatgggttgttaaagagcccggtgcatagggtgg 745 Query: 984 tgaccaatgcagagaaagagcggttatctttggtgatgttctacacgatgaaccctgaga 1043 |||| || || |||| ||||| | || |||||||||||||| || || | || |||| Sbjct: 746 tgacgaacgccgagagggagcgagtgtcggtggtgatgttctacgcgctggatccggaga 805 Query: 1044 aggagattgagccactgccagagctggtgga 1074 ||||| | ||||| ||| ||||||||||| Sbjct: 806 aggagctggagccggcgccggagctggtgga 836 Score = 56.0 bits (28), Expect = 3e-04 Identities = 118/148 (79%) Strand = Plus / Plus Query: 143 gtcaagatacccccgatcgtgcaggagctggcgaccggcgtgcaagagccaccgagccgg 202 ||||||||||| ||||| ||||||||||| || ||||||| || ||||| ||||||| | Sbjct: 28 gtcaagataccgccgattgtgcaggagctcgccgccggcgtccatgagccgccgagccag 87 Query: 203 tatgtgatcgctgagcacaaccgccccgccgtggctgcttctgagatgcctgatccgata 262 || || ||| ||| | ||||||| ||| | || | || || |||||||| || || Sbjct: 88 tacatggtcggcgagaaagaccgccctgccatcgccggctccgacatgcctgagcccatc 147 Query: 263 cccatcgtcgatctcagccggctgtctg 290 ||| ||||||| |||||||||||||||| Sbjct: 148 cccgtcgtcgacctcagccggctgtctg 175
>ref|NM_001063493.1| Oryza sativa (japonica cultivar-group) Os06g0176800 (Os06g0176800) mRNA, complete cds Length = 954 Score = 141 bits (71), Expect = 7e-30 Identities = 104/115 (90%) Strand = Plus / Plus Query: 418 caagctcccactggaagagaagcagaagtactcaaacttggtgaacggcgacgaagtcag 477 ||||||||||||||||||||||||||||||||| ||| ||||||||||| | || |||| Sbjct: 294 caagctcccactggaagagaagcagaagtactccaacctggtgaacggcaaggatttcag 353 Query: 478 gatcgaaggttacgggaacgacatggtcgtatcagagaagcagatcctggactgg 532 ||||||||| ||||| |||||||||||||| |||||||| ||||||||| ||||| Sbjct: 354 gatcgaagggtacggcaacgacatggtcgtgtcagagaaacagatcctgaactgg 408 Score = 61.9 bits (31), Expect = 6e-06 Identities = 121/151 (80%) Strand = Plus / Plus Query: 924 tgggagatgtaatggagataatgagcaatggattcttcaagagcccgattcacagggttg 983 |||| |||| ||||||||||||||||||||| || || ||||||||| | || ||||| | Sbjct: 686 tgggggatggaatggagataatgagcaatgggttgttaaagagcccggtgcatagggtgg 745 Query: 984 tgaccaatgcagagaaagagcggttatctttggtgatgttctacacgatgaaccctgaga 1043 |||| || || |||| ||||| | || |||||||||||||| || || | || |||| Sbjct: 746 tgacgaacgccgagagggagcgagtgtcggtggtgatgttctacgcgctggatccggaga 805 Query: 1044 aggagattgagccactgccagagctggtgga 1074 ||||| | ||||| ||| ||||||||||| Sbjct: 806 aggagctggagccggcgccggagctggtgga 836 Score = 56.0 bits (28), Expect = 3e-04 Identities = 118/148 (79%) Strand = Plus / Plus Query: 143 gtcaagatacccccgatcgtgcaggagctggcgaccggcgtgcaagagccaccgagccgg 202 ||||||||||| ||||| ||||||||||| || ||||||| || ||||| ||||||| | Sbjct: 28 gtcaagataccgccgattgtgcaggagctcgccgccggcgtccatgagccgccgagccag 87 Query: 203 tatgtgatcgctgagcacaaccgccccgccgtggctgcttctgagatgcctgatccgata 262 || || ||| ||| | ||||||| ||| | || | || || |||||||| || || Sbjct: 88 tacatggtcggcgagaaagaccgccctgccatcgccggctccgacatgcctgagcccatc 147 Query: 263 cccatcgtcgatctcagccggctgtctg 290 ||| ||||||| |||||||||||||||| Sbjct: 148 cccgtcgtcgacctcagccggctgtctg 175
>gb|BT016483.1| Zea mays clone Contig316 mRNA sequence Length = 1124 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 936 tggagataatgagcaatggattcttcaagagcccgattcacagggttgtgaccaatgcag 995 |||||||||||||||| || | ||||||||||| | |||||||||||||| ||||||| Sbjct: 782 tggagataatgagcaacgggatattcaagagcccagtgcacagggttgtgacgaatgcag 841 Query: 996 agaa 999 |||| Sbjct: 842 agaa 845
>ref|NM_001063500.1| Oryza sativa (japonica cultivar-group) Os06g0178700 (Os06g0178700) mRNA, complete cds Length = 1302 Score = 50.1 bits (25), Expect = 0.021 Identities = 43/49 (87%) Strand = Plus / Plus Query: 305 gaggttgccaagctgcggtctgccttggagaactggggcctgttcctgg 353 |||| ||||||||||||||| || || ||||||||||||| ||||||| Sbjct: 275 gaggctgccaagctgcggtcggctctgcagaactggggcctcttcctgg 323 Score = 48.1 bits (24), Expect = 0.083 Identities = 27/28 (96%) Strand = Plus / Plus Query: 177 ccggcgtgcaagagccaccgagccggta 204 |||||||||| ||||||||||||||||| Sbjct: 144 ccggcgtgcaggagccaccgagccggta 171
>gb|AC185359.2| Populus trichocarpa clone Pop1-53C7, complete sequence Length = 136782 Score = 50.1 bits (25), Expect = 0.021 Identities = 43/49 (87%) Strand = Plus / Minus Query: 939 agataatgagcaatggattcttcaagagcccgattcacagggttgtgac 987 ||||||||||||||||| | ||||||||||| | |||||||| ||||| Sbjct: 63780 agataatgagcaatggaatattcaagagcccagtacacagggtggtgac 63732
>dbj|AK102979.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115N23, full insert sequence Length = 1303 Score = 50.1 bits (25), Expect = 0.021 Identities = 43/49 (87%) Strand = Plus / Plus Query: 305 gaggttgccaagctgcggtctgccttggagaactggggcctgttcctgg 353 |||| ||||||||||||||| || || ||||||||||||| ||||||| Sbjct: 276 gaggctgccaagctgcggtcggctctgcagaactggggcctcttcctgg 324 Score = 48.1 bits (24), Expect = 0.083 Identities = 27/28 (96%) Strand = Plus / Plus Query: 177 ccggcgtgcaagagccaccgagccggta 204 |||||||||| ||||||||||||||||| Sbjct: 145 ccggcgtgcaggagccaccgagccggta 172
>dbj|AP006375.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT32M04, TM0219, complete sequence Length = 72880 Score = 50.1 bits (25), Expect = 0.021 Identities = 43/49 (87%) Strand = Plus / Minus Query: 939 agataatgagcaatggattcttcaagagcccgattcacagggttgtgac 987 |||| |||||||||||| | ||||||||||| || ||||||||| |||| Sbjct: 67322 agatcatgagcaatggaatattcaagagcccaatgcacagggttttgac 67274 Score = 42.1 bits (21), Expect = 5.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 939 agataatgagcaatggattcttcaagagcccgattcacagggttgtgac 987 |||| |||||||||||| | |||||||| || || ||||||| |||||| Sbjct: 51619 agatcatgagcaatggaatattcaagagtccaatgcacagggctgtgac 51571 Score = 42.1 bits (21), Expect = 5.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 939 agataatgagcaatggattcttcaagagcccgattcacagggttgtgac 987 |||| |||||||||||| | |||||||| || || ||||||| |||||| Sbjct: 61617 agattatgagcaatggaatattcaagagtccaatgcacagggctgtgac 61569
>ref|NM_122062.1| Arabidopsis thaliana oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and > (AT5G20550) mRNA, complete cds Length = 1227 Score = 48.1 bits (24), Expect = 0.083 Identities = 57/68 (83%) Strand = Plus / Plus Query: 935 atggagataatgagcaatggattcttcaagagcccgattcacagggttgtgaccaatgca 994 |||||||||||||||||||| | | |||||||||| |||| || || ||||| ||| || Sbjct: 833 atggagataatgagcaatgggatatacaagagcccggttcatagagtggtgactaataca 892 Query: 995 gagaaaga 1002 || ||||| Sbjct: 893 gaaaaaga 900
>gb|AF527606.1| Hordeum vulgare iron/ascorbate-dependent oxidoreductase (Hcp1) mRNA, complete cds Length = 1360 Score = 48.1 bits (24), Expect = 0.083 Identities = 45/52 (86%) Strand = Plus / Plus Query: 936 tggagataatgagcaatggattcttcaagagcccgattcacagggttgtgac 987 |||||||||||| ||||||| |||| | ||||||| ||||||| || ||||| Sbjct: 836 tggagataatgaacaatggaatctttaggagcccggttcacagagtggtgac 887
>gb|AY085103.1| Arabidopsis thaliana clone 12971 mRNA, complete sequence Length = 1228 Score = 48.1 bits (24), Expect = 0.083 Identities = 57/68 (83%) Strand = Plus / Plus Query: 935 atggagataatgagcaatggattcttcaagagcccgattcacagggttgtgaccaatgca 994 |||||||||||||||||||| | | |||||||||| |||| || || ||||| ||| || Sbjct: 833 atggagataatgagcaatgggatatacaagagcccggttcatagagtggtgactaataca 892 Query: 995 gagaaaga 1002 || ||||| Sbjct: 893 gaaaaaga 900
>ref|NM_001053220.1| Oryza sativa (japonica cultivar-group) Os02g0320800 (Os02g0320800) mRNA, partial cds Length = 1256 Score = 46.1 bits (23), Expect = 0.33 Identities = 56/67 (83%) Strand = Plus / Plus Query: 937 ggagataatgagcaatggattcttcaagagcccgattcacagggttgtgaccaatgcaga 996 |||| ||||||||||||| | |||| |||||| | || |||||||||| || |||||| Sbjct: 867 ggaggtaatgagcaatgggatgttcagaagcccggtgcatagggttgtgaacagtgcaga 926 Query: 997 gaaagag 1003 ||||||| Sbjct: 927 gaaagag 933
>dbj|AK111474.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-F04, full insert sequence Length = 1257 Score = 46.1 bits (23), Expect = 0.33 Identities = 56/67 (83%) Strand = Plus / Plus Query: 937 ggagataatgagcaatggattcttcaagagcccgattcacagggttgtgaccaatgcaga 996 |||| ||||||||||||| | |||| |||||| | || |||||||||| || |||||| Sbjct: 867 ggaggtaatgagcaatgggatgttcagaagcccggtgcatagggttgtgaacagtgcaga 926 Query: 997 gaaagag 1003 ||||||| Sbjct: 927 gaaagag 933
>gb|U97530.1|PAU97530 Prunus armeniaca ethylene-forming-enzyme-like dioxygenase mRNA, complete cds Length = 1318 Score = 46.1 bits (23), Expect = 0.33 Identities = 50/59 (84%) Strand = Plus / Plus Query: 938 gagataatgagcaatggattcttcaagagcccgattcacagggttgtgaccaatgcaga 996 |||||| ||||||||||| | ||||||||||| | |||||||| ||||| ||| |||| Sbjct: 934 gagatattgagcaatggaatattcaagagccctgtacacagggtagtgacaaatccaga 992
>emb|CU207366.1| Gramella forsetii KT0803 complete genome Length = 3798465 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 428 ctggaagagaagcagaagtactcaaa 453 |||||||||||||||||||| ||||| Sbjct: 2927736 ctggaagagaagcagaagtattcaaa 2927711
>emb|AM114193.2| Uncultured methanogenic archaeon RC-I complete genome Length = 3179916 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 708 ttgtcaacatgttcgacgagaa 729 |||||||||||||||||||||| Sbjct: 1240535 ttgtcaacatgttcgacgagaa 1240556
>gb|DQ087252.1| Fragaria x ananassa flavonol synthase (FLS) mRNA, complete cds Length = 1044 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 934 aatggagataatgagcaatgga 955 |||||||||||||||||||||| Sbjct: 812 aatggagataatgagcaatgga 833
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1088 aggcggtacaggaagacaacaa 1109 |||||||||||||||||||||| Sbjct: 1667138 aggcggtacaggaagacaacaa 1667117
>ref|NM_122047.2| Arabidopsis thaliana unknown protein (AT5G20400) mRNA, complete cds Length = 1228 Score = 44.1 bits (22), Expect = 1.3 Identities = 37/42 (88%) Strand = Plus / Plus Query: 934 aatggagataatgagcaatggattcttcaagagcccgattca 975 ||||||||||||||||||||| | | |||||||||| |||| Sbjct: 821 aatggagataatgagcaatgggatatacaagagcccggttca 862
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 1.3 Identities = 52/62 (83%) Strand = Plus / Plus Query: 942 taatgagcaatggattcttcaagagcccgattcacagggttgtgaccaatgcagagaaag 1001 ||||||||||||| | |||| |||||| | || |||||||||| || ||||||||||| Sbjct: 12789458 taatgagcaatgggatgttcagaagcccggtgcatagggttgtgaacagtgcagagaaag 12789517 Query: 1002 ag 1003 || Sbjct: 12789518 ag 12789519
>gb|AY087779.1| Arabidopsis thaliana clone 38372 mRNA, complete sequence Length = 1187 Score = 44.1 bits (22), Expect = 1.3 Identities = 37/42 (88%) Strand = Plus / Plus Query: 934 aatggagataatgagcaatggattcttcaagagcccgattca 975 ||||||||||||||||||||| | | |||||||||| |||| Sbjct: 821 aatggagataatgagcaatgggatatacaagagcccggttca 862
>gb|BT005178.1| Arabidopsis thaliana clone U20890 putative ethylene-forming dioxygenase (At5g20400) mRNA, complete cds Length = 1078 Score = 44.1 bits (22), Expect = 1.3 Identities = 37/42 (88%) Strand = Plus / Plus Query: 934 aatggagataatgagcaatggattcttcaagagcccgattca 975 ||||||||||||||||||||| | | |||||||||| |||| Sbjct: 804 aatggagataatgagcaatgggatatacaagagcccggttca 845
>dbj|AP005651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0086N11 Length = 146185 Score = 44.1 bits (22), Expect = 1.3 Identities = 52/62 (83%) Strand = Plus / Plus Query: 942 taatgagcaatggattcttcaagagcccgattcacagggttgtgaccaatgcagagaaag 1001 ||||||||||||| | |||| |||||| | || |||||||||| || ||||||||||| Sbjct: 137735 taatgagcaatgggatgttcagaagcccggtgcatagggttgtgaacagtgcagagaaag 137794 Query: 1002 ag 1003 || Sbjct: 137795 ag 137796
>dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A18 Length = 176755 Score = 44.1 bits (22), Expect = 1.3 Identities = 52/62 (83%) Strand = Plus / Plus Query: 942 taatgagcaatggattcttcaagagcccgattcacagggttgtgaccaatgcagagaaag 1001 ||||||||||||| | |||| |||||| | || |||||||||| || ||||||||||| Sbjct: 8940 taatgagcaatgggatgttcagaagcccggtgcatagggttgtgaacagtgcagagaaag 8999 Query: 1002 ag 1003 || Sbjct: 9000 ag 9001
>gb|BT002900.1| Arabidopsis thaliana clone RAFL16-03-J22 (R20890) putative ethylene-forming dioxygenase (At5g20400) mRNA, complete cds Length = 1197 Score = 44.1 bits (22), Expect = 1.3 Identities = 37/42 (88%) Strand = Plus / Plus Query: 934 aatggagataatgagcaatggattcttcaagagcccgattca 975 ||||||||||||||||||||| | | |||||||||| |||| Sbjct: 815 aatggagataatgagcaatgggatatacaagagcccggttca 856
>emb|BX831586.1|CNS09ZJV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH16ZH08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1135 Score = 44.1 bits (22), Expect = 1.3 Identities = 37/42 (88%) Strand = Plus / Plus Query: 934 aatggagataatgagcaatggattcttcaagagcccgattca 975 ||||||||||||||||||||| | | |||||||||| |||| Sbjct: 809 aatggagataatgagcaatgggatatacaagagcccggttca 850
>gb|AC151744.23| Medicago truncatula clone mth2-32k10, complete sequence Length = 110897 Score = 44.1 bits (22), Expect = 1.3 Identities = 49/58 (84%) Strand = Plus / Minus Query: 939 agataatgagcaatggattcttcaagagcccgattcacagggttgtgaccaatgcaga 996 |||| ||||| |||||| | ||||||||||| || || ||||||||||| ||| |||| Sbjct: 64278 agattatgagtaatggaatattcaagagcccaatgcatagggttgtgacaaatacaga 64221
>gb|AY850367.1| Penicillium chrysogenum calreticulin mRNA, complete cds Length = 1674 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1032 tgaaccctgagaaggagattga 1053 |||||||||||||||||||||| Sbjct: 725 tgaaccctgagaaggagattga 746
>gb|DQ230993.1| Pyrus communis flavonol synthase mRNA, complete cds Length = 1014 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 935 atggagataatgagcaatgga 955 ||||||||||||||||||||| Sbjct: 796 atggagataatgagcaatgga 816
>dbj|AB241068.1| Streptomyces halstedii halstoctacosanolide biosynthetic gene cluster (hlsA, hlsB, hlsC, hlsD, hlsE, hlsF, hlsG, hlsH, hlsI), complete cds Length = 107687 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 caccgagccggtatgtgatcg 212 ||||||||||||||||||||| Sbjct: 106214 caccgagccggtatgtgatcg 106194
>gb|AY742296.1| Malus x domestica flavonol synthase-like mRNA, partial sequence Length = 334 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 935 atggagataatgagcaatgga 955 ||||||||||||||||||||| Sbjct: 225 atggagataatgagcaatgga 245
>gb|AY965343.1| Malus x domestica cultivar M9 flavonol synthase mRNA, complete cds Length = 1014 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 935 atggagataatgagcaatgga 955 ||||||||||||||||||||| Sbjct: 796 atggagataatgagcaatgga 816
>gb|AC023794.37| Homo sapiens 12 BAC RP11-834C11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 198488 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 851 agtgggctccagcttcagaat 871 ||||||||||||||||||||| Sbjct: 179252 agtgggctccagcttcagaat 179232
>gb|AF494389.1| Malus x domestica flavonol synthase (FLS-2) mRNA, partial cds Length = 273 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 935 atggagataatgagcaatgga 955 ||||||||||||||||||||| Sbjct: 175 atggagataatgagcaatgga 195
>gb|AF494388.1| Malus x domestica flavonol synthase (FLS-1) mRNA, partial cds Length = 288 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 935 atggagataatgagcaatgga 955 ||||||||||||||||||||| Sbjct: 184 atggagataatgagcaatgga 204
>dbj|AK107421.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-F07, full insert sequence Length = 1990 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 cggcgacgaagtcaggatcga 483 ||||||||||||||||||||| Sbjct: 1493 cggcgacgaagtcaggatcga 1513
>gb|AF119095.1|AF119095 Malus domestica flavonol synthase (FLS) mRNA, complete cds Length = 1333 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 935 atggagataatgagcaatgga 955 ||||||||||||||||||||| Sbjct: 869 atggagataatgagcaatgga 889
>emb|AL844592.6| Mouse DNA sequence from clone RP23-244J24 on chromosome 2, complete sequence Length = 197462 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 426 cactggaagagaagcagaagt 446 ||||||||||||||||||||| Sbjct: 12359 cactggaagagaagcagaagt 12339
>emb|AL807768.5| Mouse DNA sequence from clone RP23-302D20 on chromosome X, complete sequence Length = 95261 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1112 aatgactacatagcaaaactc 1132 ||||||||||||||||||||| Sbjct: 74177 aatgactacatagcaaaactc 74197 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 221,591,566 Number of extensions: 11483119 Number of successful extensions: 206851 Number of sequences better than 10.0: 41 Number of HSP's gapped: 206845 Number of HSP's successfully gapped: 68 Length of query: 1351 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1328 Effective length of database: 18,503,978,556 Effective search space: 24573283522368 Effective search space used: 24573283522368 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)