ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf87i07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os03g0241200:Os03g0241200 | 213 | 2e-55 | 2 | AK121991:Os10g0124000 | 181 | 6e-46 | 3 | AK063054:Os02g0728600 | 57 | 1e-08 | 4 | AK073155:Os06g0274200 | 57 | 2e-08 | 5 | AK063121: | 36 | 0.033 | 6 | AK121298:Os08g0296700 | 31 | 0.82 | 7 | AK105618:Os05g0132100 | 31 | 1.1 | 8 | AK069689:Os05g0132100 | 31 | 1.1 | 9 | AK059083:Os05g0132100 | 31 | 1.1 | 10 | AK068663:Os04g0551700 | 28 | 5.3 | 11 | AK120452:Os06g0146100 | 28 | 7.0 | 12 | Os01g0640000:Os01g0640000 | 28 | 9.1 | 13 | AK121497:Os01g0109700 | 28 | 9.1 | 14 | AK099755:Os02g0110600 | 28 | 9.1 | 15 | AK069727:Os02g0110600 | 28 | 9.1 |
|---|
>Os03g0241200:Os03g0241200 | Length = 128 Score = 213 bits (541), Expect = 2e-55 Identities = 110/128 (85%), Positives = 114/128 (89%) Frame = +3 Query: 108 MSQETVNPKAYPLADAQLTITILDIVQQAANYKQLKKGANEATKTLNRGISEFVVMAADT 287 MSQE VNPKAYPLADAQLT+TILD+VQQA+NYKQLKKGANEATKTLNRGISEFVVMAADT Sbjct: 1 MSQEVVNPKAYPLADAQLTMTILDLVQQASNYKQLKKGANEATKTLNRGISEFVVMAADT 60 Query: 288 XXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKQPIQSLK 467 AEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLK PIQ+LK Sbjct: 61 EPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKTPIQNLK 120 Query: 468 DAIEKLLI 491 DAIEKLLI Sbjct: 121 DAIEKLLI 128
>AK121991:Os10g0124000 | Length = 126 Score = 181 bits (458), Expect = 6e-46 Identities = 94/123 (76%), Positives = 100/123 (81%) Frame = +3 Query: 123 VNPKAYPLADAQLTITILDIVQQAANYKQLKKGANEATKTLNRGISEFVVMAADTXXXXX 302 VNPKAYPLAD+QL I ++V QAANYKQLKKGANEATKTLNRGI+EFVVMAAD Sbjct: 4 VNPKAYPLADSQLAQAIQELVSQAANYKQLKKGANEATKTLNRGIAEFVVMAADAEPLEI 63 Query: 303 XXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKQPIQSLKDAIEK 482 AEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNE S L+ PI +LK AIEK Sbjct: 64 LLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASNLRDPINNLKVAIEK 123 Query: 483 LLI 491 LLI Sbjct: 124 LLI 126
>AK063054:Os02g0728600 | Length = 150 Score = 57.0 bits (136), Expect = 1e-08 Identities = 32/99 (32%), Positives = 49/99 (49%) Frame = +3 Query: 105 KMSQETVNPKAYPLADAQLTITILDIVQQAANYKQLKKGANEATKTLNRGISEFVVMAAD 284 K + + P A PLA +L L +V++A+ K LK+G E K++ RG V+A + Sbjct: 10 KKAPTALAPIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAGN 69 Query: 285 TXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRP 401 E+ N+PY++VPSK+ L A RP Sbjct: 70 ISPIDVITHVPILCEEANIPYIYVPSKEDLATAGTTKRP 108
>AK073155:Os06g0274200 | Length = 150 Score = 56.6 bits (135), Expect = 2e-08 Identities = 32/99 (32%), Positives = 49/99 (49%) Frame = +3 Query: 105 KMSQETVNPKAYPLADAQLTITILDIVQQAANYKQLKKGANEATKTLNRGISEFVVMAAD 284 K + + P A PLA +L L +V++A+ K LK+G E K++ RG ++A + Sbjct: 10 KKTPVALAPIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGQKGLCIIAGN 69 Query: 285 TXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRP 401 E+ N+PYV+VPSK+ L A RP Sbjct: 70 ISPIDVITHVPILCEEANIPYVYVPSKEDLATAGTTKRP 108
>AK063121: | Length = 136 Score = 35.8 bits (81), Expect = 0.033 Identities = 19/74 (25%), Positives = 35/74 (47%) Frame = +3 Query: 177 DIVQQAANYKQLKKGANEATKTLNRGISEFVVMAADTXXXXXXXXXXXXAEDKNVPYVFV 356 +++++A + LK+G +EA K L+ + +A D E+ V + V Sbjct: 22 EVLKKALVHDGLKRGLHEAAKALDSRRARLCCLAQDCDEPSYSKLVRALCEEHGVNLILV 81 Query: 357 PSKQALGRACGVTR 398 PS + LG CG+ + Sbjct: 82 PSGKQLGEWCGLCK 95
>AK121298:Os08g0296700 | Length = 1575 Score = 31.2 bits (69), Expect = 0.82 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 8/70 (11%) Frame = -3 Query: 340 TFLSSASNGRWRRISSGSVSAAITTN--------SDIPLLRVLVASLAPFLSCL*LAACW 185 T LS A +G IS S+ T SD+ + L S P L+CL L++C Sbjct: 1192 TLLSRALSGGASHISPSSLDKLCMTGIQDSTLQFSDVSSIADLDVSGCPKLACLDLSSCT 1251 Query: 184 TMSRIVIVSC 155 + ++ ++ C Sbjct: 1252 ALEKLCVIDC 1261
>AK105618:Os05g0132100 | Length = 669 Score = 30.8 bits (68), Expect = 1.1 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -2 Query: 542 EKLCHTRPITLKGLDKSYEKLLDGILETLDRLLQLATLI 426 + L +P L G+ + YEK+ +GIL+ L L L LI Sbjct: 311 DDLMELKPTLLVGVPRVYEKIYEGILKALSELRPLRRLI 349
>AK069689:Os05g0132100 | Length = 669 Score = 30.8 bits (68), Expect = 1.1 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -2 Query: 542 EKLCHTRPITLKGLDKSYEKLLDGILETLDRLLQLATLI 426 + L +P L G+ + YEK+ +GIL+ L L L LI Sbjct: 311 DDLMELKPTLLVGVPRVYEKIYEGILKALSELRPLRRLI 349
>AK059083:Os05g0132100 | Length = 537 Score = 30.8 bits (68), Expect = 1.1 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -2 Query: 542 EKLCHTRPITLKGLDKSYEKLLDGILETLDRLLQLATLI 426 + L +P L G+ + YEK+ +GIL+ L L L LI Sbjct: 214 DDLMELKPTLLVGVPRVYEKIYEGILKALSELRPLRRLI 252
>AK068663:Os04g0551700 | Length = 215 Score = 28.5 bits (62), Expect = 5.3 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +3 Query: 3 VAPFSRPPKALAPSSPTRGGRLLLAPPSRQTR 98 +AP R + LAP+ P GG L PSR++R Sbjct: 5 LAPIPRGNRRLAPAPPAAGGFLRALFPSRRSR 36
>AK120452:Os06g0146100 | Length = 1026 Score = 28.1 bits (61), Expect = 7.0 Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 4/83 (4%) Frame = -2 Query: 677 LWITQVTNIRWQT*WQHDLT*QSCKI*LKNIKDLADKTPSPVQAPEKLCHTRPITLKGLD 498 LW T+ + T W ++ + +N +DLA+ + SP+ P + H T L Sbjct: 283 LWSTKAWDCLKPTLWGNNREGSRLVVTTRN-RDLAEGSSSPLVYPLQTLHREDATKLLLA 341 Query: 497 KSYEKLL----DGILETLDRLLQ 441 K+ + L DG+ ET +++L+ Sbjct: 342 KTNKSLCDINKDGMNETFEKILK 364
>Os01g0640000:Os01g0640000 | Length = 1660 Score = 27.7 bits (60), Expect = 9.1 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Frame = +3 Query: 9 PF-SRPPKALAPSSPTRGGRLLLAPP--SRQTRQGKMSQETVNPKAYPLADA 155 PF PP L P PT+ G++ L P SR + Q V K P ADA Sbjct: 1511 PFRGEPPSTLPPLPPTQHGQVCLEPQSVSRSRLARGVRQVLVQWKNKPAADA 1562
>AK121497:Os01g0109700 | Length = 1326 Score = 27.7 bits (60), Expect = 9.1 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = +3 Query: 15 SRPPKALAPSSP--TRGGRLLLAPPSRQTRQGKMSQETVNPKAYPLADAQ 158 S PP+A+APS P R R L PP+ S+ KA+P AD + Sbjct: 121 SVPPQAVAPSRPGIRRDDRTSLVPPA--------SRNEKRDKAHPHADRE 162
>AK099755:Os02g0110600 | Length = 269 Score = 27.7 bits (60), Expect = 9.1 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 4/32 (12%) Frame = +2 Query: 122 GQPQGLPAGGRAADDNDPRHR----PAGRQLQ 205 G+ G+PA G A D PRH+ PA RQ+Q Sbjct: 65 GEGGGVPARGGGAADPPPRHQVHQHPARRQVQ 96
>AK069727:Os02g0110600 | Length = 269 Score = 27.7 bits (60), Expect = 9.1 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 4/32 (12%) Frame = +2 Query: 122 GQPQGLPAGGRAADDNDPRHR----PAGRQLQ 205 G+ G+PA G A D PRH+ PA RQ+Q Sbjct: 65 GEGGGVPARGGGAADPPPRHQVHQHPARRQVQ 96 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 20,485,029 Number of extensions: 457511 Number of successful extensions: 1454 Number of sequences better than 10.0: 15 Number of HSP's gapped: 1454 Number of HSP's successfully gapped: 15 Length of query: 257 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 159 Effective length of database: 11,475,837 Effective search space: 1824658083 Effective search space used: 1824658083 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
