| Clone Name | FLbaf87h03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X57407.1|TAPPSBP Wheat PsbP mRNA for 23 kDa oxygen evolving protein of photosystem II Length = 967 Score = 1626 bits (820), Expect = 0.0 Identities = 927/958 (96%), Gaps = 6/958 (0%) Strand = Plus / Plus Query: 62 taaacagcagcgagcaatggcgtccacctcctgcttcctccaccagtccaccgcgcgcct 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3 taaacagcagcgagcaatggcgtccacctcctgcttcctccaccagtccaccgcgcgcct 62 Query: 122 ggctgcctcggcgcgccctgctcccgccgtcgggcgcacccagctgttcgtctgcaaggc 181 ||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 63 ggccgcctcggcgcgccctgcgcccgccgtcgggcgcacccagcttttcgtctgcaaggc 122 Query: 182 gcacaagaatgacgaggctgcatctgacgctgctgtcgtcaccagccggcgcgccgcgct 241 ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 123 gcagaagaatgacgaggctgcatctgacgctgccgtcgtcaccagccggcgcgccgcgct 182 Query: 242 gtccctcctcgccggtgccgccgccgtcgccgtcaaggtctctcccgccgctgccgccta 301 ||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| Sbjct: 183 gtccctcctcgccggtgccgccgccatcgccgtcaaggtctcccccgccgccgccgccta 242 Query: 302 cggagaagcagcgaacgtgttcggcaaggcgaagaagaacacggacttcgtggcgtacag 361 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 cggagaagcagccaacgtgttcggcaaggcgaagaagaacacggacttcgtggcgtacag 302 Query: 362 cggcgaggggttcaaactgatgatcccggccaagtggaaccccagcaaggagcgtgagtt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 303 cggcgaggggttcaaactgatgatcccggccaagtggaaccccagcaaggagcgtgagtt 362 Query: 422 ccctgggcaggtgctccgttacgaggacaacttcgacgccaccagcaacctctccgttat 481 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 ccctgggcaggtgctccgctacgaggacaacttcgacgccaccagcaacctctccgttat 422 Query: 482 aatcaaccccaccaccaagaagaccatcaccgactacggttcccctgaggagttcctctc 541 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 423 aatcaaccccactaccaagaagaccatcaccgactacggttcccctgaggagttcctctc 482 Query: 542 ccaggtcggcttcctcctcggccagcagtcctacggcggcaagaccgactccgagggcgg 601 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 483 ccaggtcggcttcctcctcggccagcagtcctacggtggcaagaccgactccgagggtgg 542 Query: 602 cttcgagtcagacgctgtggcgacggccaacgtgctcgagagctcggcgccggtggtgga 661 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 543 gttcgagtcagacgctgtggcgacggcgaacgtgctggagagctcggcgccggtggtgga 602 Query: 662 cggtaagcagtactacagcataacggtgctcaccaggaccgcggacggagacgagggagg 721 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 603 cggtaagcagtactacagcataacggtgctcacgaggaccgcggacggagacgagggagg 662 Query: 722 gaagcaccagctcatcaccgccaccgtcgccgacggcaagctctacgtctgcaaggcgca 781 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 663 gaagcaccagctcatcaccgccaccgtcgccgacggcaagctctacgtctgcaaggcgca 722 Query: 782 agccggagacaagaggtggttcaagggcgccaagaagttcgtcgagaacgccgcaggatc 841 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 723 a---cgagacaagaggtggttcaagggcgccaagaagttcgtcgagaacgccgcaggatc 779 Query: 842 cttcagtgtcgcataaatatacatgaccgatcggcgaatttaatgg-aatctcctcaggg 900 |||||| |||||||||||||||| |||||| |||||| |||||||| ||| ||||||||| Sbjct: 780 cttcagcgtcgcataaatatacacgaccgaccggcgagtttaatggaaatttcctcaggg 839 Query: 901 aagcaccgtgtagagaccgatccagggcatgcatgtgtgtttctttgatttgtacatgag 960 | ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 840 atgcaccatgtagagaccgat-cagggcatgcatgtgtgtttctttgatttgtacatgag 898 Query: 961 gatggatgaactaagaggtcgatttccc-tcaaggattcatgtgtgcacaatgattaa 1017 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 899 gatggatgaactaagaggtcgatttcccttcaaggattcatgtgtgcacaatgattaa 956
>gb|DQ245893.1| Zea mays clone 22016 mRNA sequence Length = 1087 Score = 593 bits (299), Expect = e-166 Identities = 542/623 (86%) Strand = Plus / Plus Query: 231 cgcgccgcgctgtccctcctcgccggtgccgccgccgtcgccgtcaaggtctctcccgcc 290 ||||||||||| | ||||||||||| | ||| ||||||| || ||||| |||||| Sbjct: 296 cgcgccgcgctcgcgctcctcgccggcgtcgcggccgtcggcgccaaggcgagccccgcc 355 Query: 291 gctgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacggacttc 350 || ||||||||||| |||||||| ||||||||||||||| | |||||||||||||||||| Sbjct: 356 gccgccgcctacggggaagcagccaacgtgttcggcaagaccaagaagaacacggacttc 415 Query: 351 gtggcgtacagcggcgaggggttcaaactgatgatcccggccaagtggaaccccagcaag 410 | | ||| |||||| || ||||| ||| |||||||| |||||||||||||||||||| Sbjct: 416 atctcctacgtcggcgacggcttcaagctgctgatcccgtccaagtggaaccccagcaag 475 Query: 411 gagcgtgagttccctgggcaggtgctccgttacgaggacaacttcgacgccaccagcaac 470 ||||| |||||||| |||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 476 gagcgggagttccccgggcaggtgctccgctacgaggacaacttcgacgccaacagcaac 535 Query: 471 ctctccgttataatcaaccccaccaccaagaagaccatcaccgactacggttcccctgag 530 | ||||| || ||| | |||||| |||||||| |||||||||| ||||| ||||| ||| Sbjct: 536 gtgtccgtcatcatccagcccacctccaagaaggccatcaccgagtacggctcccccgag 595 Query: 531 gagttcctctcccaggtcggcttcctcctcggccagcagtcctacggcggcaagaccgac 590 ||||||||||| ||||||| || ||| |||||| ||||| |||||||||||||||||||| Sbjct: 596 gagttcctctcgcaggtcgactacctgctcggcaagcaggcctacggcggcaagaccgac 655 Query: 591 tccgagggcggcttcgagtcagacgctgtggcgacggccaacgtgctcgagagctcggcg 650 |||||||||||||||||| | ||||| ||||| || ||||||||||| |||||||| | Sbjct: 656 tccgagggcggcttcgagaccgacgccgtggccaccgccaacgtgctggagagctccacc 715 Query: 651 ccggtggtggacggtaagcagtactacagcataacggtgctcaccaggaccgcggacgga 710 || ||||||||||| ||||||||||||||||| || ||||| |||||||| |||||||| Sbjct: 716 cccgtggtggacggcaagcagtactacagcatcaccgtgctgaccaggacggcggacggc 775 Query: 711 gacgagggagggaagcaccagctcatcaccgccaccgtcgccgacggcaagctctacgtc 770 |||||||| || ||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 776 gacgagggcggcaagcaccagctcatcaccgccaccgtctccgacggcaagctctacatc 835 Query: 771 tgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaagttcgtcgagaac 830 ||||||||||| ||||| |||||| |||||||||||||||||| |||| ||||||||| Sbjct: 836 tgcaaggcgcaggccggcgacaagcggtggttcaagggcgccaggaagggcgtcgagaag 895 Query: 831 gccgcaggatccttcagtgtcgc 853 ||||| | |||||||| ||||| Sbjct: 896 gccgccgcctccttcagcgtcgc 918 Score = 69.9 bits (35), Expect = 2e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 78 atggcgtccacctcctgcttcctccaccagtccaccgcgcgcctggc 124 |||||||||||||| ||||||||||||||||||||||| ||| |||| Sbjct: 146 atggcgtccacctcgtgcttcctccaccagtccaccgcccgcgtggc 192
>ref|NM_001065398.1| Oryza sativa (japonica cultivar-group) Os07g0141400 (Os07g0141400) mRNA, complete cds Length = 1109 Score = 553 bits (279), Expect = e-154 Identities = 498/571 (87%) Strand = Plus / Plus Query: 285 cccgccgctgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacg 344 |||||||| || |||||||| || || |||||||||||||| ||| | |||| ||||||| Sbjct: 299 cccgccgccgcggcctacggcgaggcggcgaacgtgttcgggaagcccaagacgaacacg 358 Query: 345 gacttcgtggcgtacagcggcgaggggttcaaactgatgatcccggccaagtggaacccc 404 || ||| | || |||||||||||||||||||| ||| |||||||| |||||||||||||| Sbjct: 359 gagttcatcgcctacagcggcgaggggttcaagctgctgatcccgtccaagtggaacccc 418 Query: 405 agcaaggagcgtgagttccctgggcaggtgctccgttacgaggacaacttcgacgccacc 464 ||||||||||| |||||||| || ||||| ||||| |||||||||||||||||||||| | Sbjct: 419 agcaaggagcgcgagttccccggacaggtcctccgctacgaggacaacttcgacgccaac 478 Query: 465 agcaacctctccgttataatcaaccccaccaccaagaagaccatcaccgactacggttcc 524 |||||| ||||||| ||||||||||||||||||||||||||||||||||| | ||| ||| Sbjct: 479 agcaacgtctccgtcataatcaaccccaccaccaagaagaccatcaccgagttcggctcc 538 Query: 525 cctgaggagttcctctcccaggtcggcttcctcctcggccagcagtcctacggcggcaag 584 || |||||||||||| ||||||||| |||| | || ||| ||||| ||||| ||||||| Sbjct: 539 cccgaggagttcctcgcccaggtcgacttcttgcttggcaagcaggcctactccggcaag 598 Query: 585 accgactccgagggcggcttcgagtcagacgctgtggcgacggccaacgtgctcgagagc 644 || || |||||||| || || ||||| ||||| ||||||||||| ||| | || |||||| Sbjct: 599 acagattccgagggtgggtttgagtcggacgcggtggcgacggcgaacatcctggagagc 658 Query: 645 tcggcgccggtggtggacggtaagcagtactacagcataacggtgctcaccaggaccgcg 704 |||||||||||||||| || ||||||||||||||| |||||||||| || ||||| ||| Sbjct: 659 tcggcgccggtggtgggagggaagcagtactacagcgtaacggtgctgacgaggacggcg 718 Query: 705 gacggagacgagggagggaagcaccagctcatcaccgccaccgtcgccgacggcaagctc 764 ||||| |||||||| || ||||||||||| ||||| ||||||||| |||||||||||| Sbjct: 719 gacggcgacgagggcggcaagcaccagctgatcacggccaccgtcaacgacggcaagctg 778 Query: 765 tacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaagttcgtc 824 ||| ||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 779 tacatctgcaaggcgcaggccggcgacaagaggtggttcaagggcgccaggaagttcgtc 838 Query: 825 gagaacgccgcaggatccttcagtgtcgcat 855 |||| ||| || | |||||||| ||||||| Sbjct: 839 gagagcgcagccagctccttcagcgtcgcat 869 Score = 75.8 bits (38), Expect = 3e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 75 gcaatggcgtccacctcctgcttcctccaccagtccac 112 |||||||||||||||||||||||||||||||||||||| Sbjct: 104 gcaatggcgtccacctcctgcttcctccaccagtccac 141
>dbj|AK104722.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-B02, full insert sequence Length = 1078 Score = 553 bits (279), Expect = e-154 Identities = 498/571 (87%) Strand = Plus / Plus Query: 285 cccgccgctgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacg 344 |||||||| || |||||||| || || |||||||||||||| ||| | |||| ||||||| Sbjct: 258 cccgccgccgcggcctacggcgaggcggcgaacgtgttcgggaagcccaagacgaacacg 317 Query: 345 gacttcgtggcgtacagcggcgaggggttcaaactgatgatcccggccaagtggaacccc 404 || ||| | || |||||||||||||||||||| ||| |||||||| |||||||||||||| Sbjct: 318 gagttcatcgcctacagcggcgaggggttcaagctgctgatcccgtccaagtggaacccc 377 Query: 405 agcaaggagcgtgagttccctgggcaggtgctccgttacgaggacaacttcgacgccacc 464 ||||||||||| |||||||| || ||||| ||||| |||||||||||||||||||||| | Sbjct: 378 agcaaggagcgcgagttccccggacaggtcctccgctacgaggacaacttcgacgccaac 437 Query: 465 agcaacctctccgttataatcaaccccaccaccaagaagaccatcaccgactacggttcc 524 |||||| ||||||| ||||||||||||||||||||||||||||||||||| | ||| ||| Sbjct: 438 agcaacgtctccgtcataatcaaccccaccaccaagaagaccatcaccgagttcggctcc 497 Query: 525 cctgaggagttcctctcccaggtcggcttcctcctcggccagcagtcctacggcggcaag 584 || |||||||||||| ||||||||| |||| | || ||| ||||| ||||| ||||||| Sbjct: 498 cccgaggagttcctcgcccaggtcgacttcttgcttggcaagcaggcctactccggcaag 557 Query: 585 accgactccgagggcggcttcgagtcagacgctgtggcgacggccaacgtgctcgagagc 644 || || |||||||| || || ||||| ||||| ||||||||||| ||| | || |||||| Sbjct: 558 acagattccgagggtgggtttgagtcggacgcggtggcgacggcgaacatcctggagagc 617 Query: 645 tcggcgccggtggtggacggtaagcagtactacagcataacggtgctcaccaggaccgcg 704 |||||||||||||||| || ||||||||||||||| |||||||||| || ||||| ||| Sbjct: 618 tcggcgccggtggtgggagggaagcagtactacagcgtaacggtgctgacgaggacggcg 677 Query: 705 gacggagacgagggagggaagcaccagctcatcaccgccaccgtcgccgacggcaagctc 764 ||||| |||||||| || ||||||||||| ||||| ||||||||| |||||||||||| Sbjct: 678 gacggcgacgagggcggcaagcaccagctgatcacggccaccgtcaacgacggcaagctg 737 Query: 765 tacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaagttcgtc 824 ||| ||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 738 tacatctgcaaggcgcaggccggcgacaagaggtggttcaagggcgccaggaagttcgtc 797 Query: 825 gagaacgccgcaggatccttcagtgtcgcat 855 |||| ||| || | |||||||| ||||||| Sbjct: 798 gagagcgcagccagctccttcagcgtcgcat 828 Score = 75.8 bits (38), Expect = 3e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 75 gcaatggcgtccacctcctgcttcctccaccagtccac 112 |||||||||||||||||||||||||||||||||||||| Sbjct: 63 gcaatggcgtccacctcctgcttcctccaccagtccac 100
>dbj|AK065248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J02, full insert sequence Length = 1114 Score = 553 bits (279), Expect = e-154 Identities = 498/571 (87%) Strand = Plus / Plus Query: 285 cccgccgctgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacg 344 |||||||| || |||||||| || || |||||||||||||| ||| | |||| ||||||| Sbjct: 302 cccgccgccgcggcctacggcgaggcggcgaacgtgttcgggaagcccaagacgaacacg 361 Query: 345 gacttcgtggcgtacagcggcgaggggttcaaactgatgatcccggccaagtggaacccc 404 || ||| | || |||||||||||||||||||| ||| |||||||| |||||||||||||| Sbjct: 362 gagttcatcgcctacagcggcgaggggttcaagctgctgatcccgtccaagtggaacccc 421 Query: 405 agcaaggagcgtgagttccctgggcaggtgctccgttacgaggacaacttcgacgccacc 464 ||||||||||| |||||||| || ||||| ||||| |||||||||||||||||||||| | Sbjct: 422 agcaaggagcgcgagttccccggacaggtcctccgctacgaggacaacttcgacgccaac 481 Query: 465 agcaacctctccgttataatcaaccccaccaccaagaagaccatcaccgactacggttcc 524 |||||| ||||||| ||||||||||||||||||||||||||||||||||| | ||| ||| Sbjct: 482 agcaacgtctccgtcataatcaaccccaccaccaagaagaccatcaccgagttcggctcc 541 Query: 525 cctgaggagttcctctcccaggtcggcttcctcctcggccagcagtcctacggcggcaag 584 || |||||||||||| ||||||||| |||| | || ||| ||||| ||||| ||||||| Sbjct: 542 cccgaggagttcctcgcccaggtcgacttcttgcttggcaagcaggcctactccggcaag 601 Query: 585 accgactccgagggcggcttcgagtcagacgctgtggcgacggccaacgtgctcgagagc 644 || || |||||||| || || ||||| ||||| ||||||||||| ||| | || |||||| Sbjct: 602 acagattccgagggtgggtttgagtcggacgcggtggcgacggcgaacatcctggagagc 661 Query: 645 tcggcgccggtggtggacggtaagcagtactacagcataacggtgctcaccaggaccgcg 704 |||||||||||||||| || ||||||||||||||| |||||||||| || ||||| ||| Sbjct: 662 tcggcgccggtggtgggagggaagcagtactacagcgtaacggtgctgacgaggacggcg 721 Query: 705 gacggagacgagggagggaagcaccagctcatcaccgccaccgtcgccgacggcaagctc 764 ||||| |||||||| || ||||||||||| ||||| ||||||||| |||||||||||| Sbjct: 722 gacggcgacgagggcggcaagcaccagctgatcacggccaccgtcaacgacggcaagctg 781 Query: 765 tacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaagttcgtc 824 ||| ||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 782 tacatctgcaaggcgcaggccggcgacaagaggtggttcaagggcgccaggaagttcgtc 841 Query: 825 gagaacgccgcaggatccttcagtgtcgcat 855 |||| ||| || | |||||||| ||||||| Sbjct: 842 gagagcgcagccagctccttcagcgtcgcat 872 Score = 75.8 bits (38), Expect = 3e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 75 gcaatggcgtccacctcctgcttcctccaccagtccac 112 |||||||||||||||||||||||||||||||||||||| Sbjct: 107 gcaatggcgtccacctcctgcttcctccaccagtccac 144
>gb|AF052203.1|AF052203 Oryza sativa 23 kDa polypeptide of photosystem II mRNA, complete cds Length = 1107 Score = 553 bits (279), Expect = e-154 Identities = 498/571 (87%) Strand = Plus / Plus Query: 285 cccgccgctgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacg 344 |||||||| || |||||||| || || |||||||||||||| ||| | |||| ||||||| Sbjct: 277 cccgccgccgcggcctacggcgaggcggcgaacgtgttcgggaagcccaagacgaacacg 336 Query: 345 gacttcgtggcgtacagcggcgaggggttcaaactgatgatcccggccaagtggaacccc 404 || ||| | || |||||||||||||||||||| ||| |||||||| |||||||||||||| Sbjct: 337 gagttcatcgcctacagcggcgaggggttcaagctgctgatcccgtccaagtggaacccc 396 Query: 405 agcaaggagcgtgagttccctgggcaggtgctccgttacgaggacaacttcgacgccacc 464 ||||||||||| |||||||| || ||||| ||||| |||||||||||||||||||||| | Sbjct: 397 agcaaggagcgcgagttccccggacaggtcctccgctacgaggacaacttcgacgccaac 456 Query: 465 agcaacctctccgttataatcaaccccaccaccaagaagaccatcaccgactacggttcc 524 |||||| ||||||| ||||||||||||||||||||||||||||||||||| | ||| ||| Sbjct: 457 agcaacgtctccgtcataatcaaccccaccaccaagaagaccatcaccgagttcggctcc 516 Query: 525 cctgaggagttcctctcccaggtcggcttcctcctcggccagcagtcctacggcggcaag 584 || |||||||||||| ||||||||| |||| | || ||| ||||| ||||| ||||||| Sbjct: 517 cccgaggagttcctcgcccaggtcgacttcttgcttggcaagcaggcctactccggcaag 576 Query: 585 accgactccgagggcggcttcgagtcagacgctgtggcgacggccaacgtgctcgagagc 644 || || |||||||| || || ||||| ||||| ||||||||||| ||| | || |||||| Sbjct: 577 acagattccgagggtgggtttgagtcggacgcggtggcgacggcgaacatcctggagagc 636 Query: 645 tcggcgccggtggtggacggtaagcagtactacagcataacggtgctcaccaggaccgcg 704 |||||||||||||||| || ||||||||||||||| |||||||||| || ||||| ||| Sbjct: 637 tcggcgccggtggtgggagggaagcagtactacagcgtaacggtgctgacgaggacggcg 696 Query: 705 gacggagacgagggagggaagcaccagctcatcaccgccaccgtcgccgacggcaagctc 764 ||||| |||||||| || ||||||||||| ||||| ||||||||| |||||||||||| Sbjct: 697 gacggcgacgagggcggcaagcaccagctgatcacggccaccgtcaacgacggcaagctg 756 Query: 765 tacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaagttcgtc 824 ||| ||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 757 tacatctgcaaggcgcaggccggcgacaagaggtggttcaagggcgccaggaagttcgtc 816 Query: 825 gagaacgccgcaggatccttcagtgtcgcat 855 |||| ||| || | |||||||| ||||||| Sbjct: 817 gagagcgcagccagctccttcagcgtcgcat 847 Score = 75.8 bits (38), Expect = 3e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 75 gcaatggcgtccacctcctgcttcctccaccagtccac 112 |||||||||||||||||||||||||||||||||||||| Sbjct: 82 gcaatggcgtccacctcctgcttcctccaccagtccac 119
>emb|CT832981.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA046I09, full insert sequence Length = 1019 Score = 545 bits (275), Expect = e-151 Identities = 497/571 (87%) Strand = Plus / Plus Query: 285 cccgccgctgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacg 344 |||||||| || |||||||| || || |||||||||||||| ||| | |||| ||||||| Sbjct: 268 cccgccgccgcggcctacggcgaggcggcgaacgtgttcgggaagcccaagacgaacacg 327 Query: 345 gacttcgtggcgtacagcggcgaggggttcaaactgatgatcccggccaagtggaacccc 404 || ||| | || |||||||||||||||||||| ||| |||||||| |||||||||||||| Sbjct: 328 gagttcatcgcctacagcggcgaggggttcaagctgctgatcccgtccaagtggaacccc 387 Query: 405 agcaaggagcgtgagttccctgggcaggtgctccgttacgaggacaacttcgacgccacc 464 ||||||||||| |||||||| || ||||| ||||| |||||||||||||||||||||| | Sbjct: 388 agcaaggagcgcgagttccccggacaggtcctccgctacgaggacaacttcgacgccaac 447 Query: 465 agcaacctctccgttataatcaaccccaccaccaagaagaccatcaccgactacggttcc 524 |||||| ||||||| ||||||||||||||||||||||||||||||||||| | ||| ||| Sbjct: 448 agcaacgtctccgtcataatcaaccccaccaccaagaagaccatcaccgagttcggctcc 507 Query: 525 cctgaggagttcctctcccaggtcggcttcctcctcggccagcagtcctacggcggcaag 584 || |||||||||||| ||||||||| |||| | || ||| ||||| ||||| ||||||| Sbjct: 508 cccgaggagttcctcgcccaggtcgacttcttgcttggcaagcaggcctactccggcaag 567 Query: 585 accgactccgagggcggcttcgagtcagacgctgtggcgacggccaacgtgctcgagagc 644 || || || ||||| || || ||||| ||||| ||||||||||| ||| | || |||||| Sbjct: 568 acagattctgagggtgggtttgagtcggacgcggtggcgacggcgaacatcctggagagc 627 Query: 645 tcggcgccggtggtggacggtaagcagtactacagcataacggtgctcaccaggaccgcg 704 |||||||||||||||| || ||||||||||||||| |||||||||| || ||||| ||| Sbjct: 628 tcggcgccggtggtgggagggaagcagtactacagcgtaacggtgctgacgaggacggcg 687 Query: 705 gacggagacgagggagggaagcaccagctcatcaccgccaccgtcgccgacggcaagctc 764 ||||| |||||||| || ||||||||||| ||||| ||||||||| |||||||||||| Sbjct: 688 gacggcgacgagggcggcaagcaccagctgatcacggccaccgtcaacgacggcaagctg 747 Query: 765 tacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaagttcgtc 824 ||| ||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 748 tacatctgcaaggcgcaggccggcgacaagaggtggttcaagggcgccaggaagttcgtc 807 Query: 825 gagaacgccgcaggatccttcagtgtcgcat 855 |||| ||| || | |||||||| ||||||| Sbjct: 808 gagagcgcagccagctccttcagcgtcgcat 838 Score = 75.8 bits (38), Expect = 3e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 75 gcaatggcgtccacctcctgcttcctccaccagtccac 112 |||||||||||||||||||||||||||||||||||||| Sbjct: 73 gcaatggcgtccacctcctgcttcctccaccagtccac 110
>emb|CT832980.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA046I08, full insert sequence Length = 1020 Score = 545 bits (275), Expect = e-151 Identities = 497/571 (87%) Strand = Plus / Plus Query: 285 cccgccgctgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacg 344 |||||||| || |||||||| || || |||||||||||||| ||| | |||| ||||||| Sbjct: 268 cccgccgccgcggcctacggcgaggcggcgaacgtgttcgggaagcccaagacgaacacg 327 Query: 345 gacttcgtggcgtacagcggcgaggggttcaaactgatgatcccggccaagtggaacccc 404 || ||| | || |||||||||||||||||||| ||| |||||||| |||||||||||||| Sbjct: 328 gagttcatcgcctacagcggcgaggggttcaagctgctgatcccgtccaagtggaacccc 387 Query: 405 agcaaggagcgtgagttccctgggcaggtgctccgttacgaggacaacttcgacgccacc 464 ||||||||||| |||||||| || ||||| ||||| |||||||||||||||||||||| | Sbjct: 388 agcaaggagcgcgagttccccggacaggtcctccgctacgaggacaacttcgacgccaac 447 Query: 465 agcaacctctccgttataatcaaccccaccaccaagaagaccatcaccgactacggttcc 524 |||||| ||||||| ||||||||||||||||||||||||||||||||||| | ||| ||| Sbjct: 448 agcaacgtctccgtcataatcaaccccaccaccaagaagaccatcaccgagttcggctcc 507 Query: 525 cctgaggagttcctctcccaggtcggcttcctcctcggccagcagtcctacggcggcaag 584 || |||||||||||| ||||||||| |||| | || ||| ||||| ||||| ||||||| Sbjct: 508 cccgaggagttcctcgcccaggtcgacttcttgcttggcaagcaggcctactccggcaag 567 Query: 585 accgactccgagggcggcttcgagtcagacgctgtggcgacggccaacgtgctcgagagc 644 || || || ||||| || || ||||| ||||| ||||||||||| ||| | || |||||| Sbjct: 568 acagattctgagggtgggtttgagtcggacgcggtggcgacggcgaacatcctggagagc 627 Query: 645 tcggcgccggtggtggacggtaagcagtactacagcataacggtgctcaccaggaccgcg 704 |||||||||||||||| || ||||||||||||||| |||||||||| || ||||| ||| Sbjct: 628 tcggcgccggtggtgggagggaagcagtactacagcgtaacggtgctgacgaggacggcg 687 Query: 705 gacggagacgagggagggaagcaccagctcatcaccgccaccgtcgccgacggcaagctc 764 ||||| |||||||| || ||||||||||| ||||| ||||||||| |||||||||||| Sbjct: 688 gacggcgacgagggcggcaagcaccagctgatcacggccaccgtcaacgacggcaagctg 747 Query: 765 tacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaagttcgtc 824 ||| ||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 748 tacatctgcaaggcgcaggccggcgacaagaggtggttcaagggcgccaggaagttcgtc 807 Query: 825 gagaacgccgcaggatccttcagtgtcgcat 855 |||| ||| || | |||||||| ||||||| Sbjct: 808 gagagcgcagccagctccttcagcgtcgcat 838 Score = 75.8 bits (38), Expect = 3e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 75 gcaatggcgtccacctcctgcttcctccaccagtccac 112 |||||||||||||||||||||||||||||||||||||| Sbjct: 73 gcaatggcgtccacctcctgcttcctccaccagtccac 110
>emb|CT832979.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA121H19, full insert sequence Length = 1077 Score = 545 bits (275), Expect = e-151 Identities = 497/571 (87%) Strand = Plus / Plus Query: 285 cccgccgctgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacg 344 |||||||| || |||||||| || || |||||||||||||| ||| | |||| ||||||| Sbjct: 309 cccgccgccgcggcctacggcgaggcggcgaacgtgttcgggaagcccaagacgaacacg 368 Query: 345 gacttcgtggcgtacagcggcgaggggttcaaactgatgatcccggccaagtggaacccc 404 || ||| | || |||||||||||||||||||| ||| |||||||| |||||||||||||| Sbjct: 369 gagttcatcgcctacagcggcgaggggttcaagctgctgatcccgtccaagtggaacccc 428 Query: 405 agcaaggagcgtgagttccctgggcaggtgctccgttacgaggacaacttcgacgccacc 464 ||||||||||| |||||||| || ||||| ||||| |||||||||||||||||||||| | Sbjct: 429 agcaaggagcgcgagttccccggacaggtcctccgctacgaggacaacttcgacgccaac 488 Query: 465 agcaacctctccgttataatcaaccccaccaccaagaagaccatcaccgactacggttcc 524 |||||| ||||||| ||||||||||||||||||||||||||||||||||| | ||| ||| Sbjct: 489 agcaacgtctccgtcataatcaaccccaccaccaagaagaccatcaccgagttcggctcc 548 Query: 525 cctgaggagttcctctcccaggtcggcttcctcctcggccagcagtcctacggcggcaag 584 || |||||||||||| ||||||||| |||| | || ||| ||||| ||||| ||||||| Sbjct: 549 cccgaggagttcctcgcccaggtcgacttcttgcttggcaagcaggcctactccggcaag 608 Query: 585 accgactccgagggcggcttcgagtcagacgctgtggcgacggccaacgtgctcgagagc 644 || || || ||||| || || ||||| ||||| ||||||||||| ||| | || |||||| Sbjct: 609 acagattctgagggtgggtttgagtcggacgcggtggcgacggcgaacatcctggagagc 668 Query: 645 tcggcgccggtggtggacggtaagcagtactacagcataacggtgctcaccaggaccgcg 704 |||||||||||||||| || ||||||||||||||| |||||||||| || ||||| ||| Sbjct: 669 tcggcgccggtggtgggagggaagcagtactacagcgtaacggtgctgacgaggacggcg 728 Query: 705 gacggagacgagggagggaagcaccagctcatcaccgccaccgtcgccgacggcaagctc 764 ||||| |||||||| || ||||||||||| ||||| ||||||||| |||||||||||| Sbjct: 729 gacggcgacgagggcggcaagcaccagctgatcacggccaccgtcaacgacggcaagctg 788 Query: 765 tacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaagttcgtc 824 ||| ||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 789 tacatctgcaaggcgcaggccggcgacaagaggtggttcaagggcgccaggaagttcgtc 848 Query: 825 gagaacgccgcaggatccttcagtgtcgcat 855 |||| ||| || | |||||||| ||||||| Sbjct: 849 gagagcgcagccagctccttcagcgtcgcat 879 Score = 75.8 bits (38), Expect = 3e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 75 gcaatggcgtccacctcctgcttcctccaccagtccac 112 |||||||||||||||||||||||||||||||||||||| Sbjct: 114 gcaatggcgtccacctcctgcttcctccaccagtccac 151
>dbj|D49713.1|RICOSEE2 Rice OSOEE2 gene for 23 kDa polypeptide of photosystem II, complete cds Length = 1008 Score = 521 bits (263), Expect = e-144 Identities = 497/571 (87%), Gaps = 3/571 (0%) Strand = Plus / Plus Query: 285 cccgccgctgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacg 344 |||||||| || |||||||| || || |||||||||||||| ||| | |||| ||||||| Sbjct: 219 cccgccgccgcggcctacggcgaggcggcgaacgtgttcgggaagcccaagacgaacacg 278 Query: 345 gacttcgtggcgtacagcggcgaggggttcaaactgatgatcccggccaagtggaacccc 404 || ||| | || |||||||||||||||||||| ||| |||||||| |||||||||||||| Sbjct: 279 gagttcatcgcctacagcggcgaggggttcaagctgctgatcccgtccaagtggaacccc 338 Query: 405 agcaaggagcgtgagttccctgggcaggtgctccgttacgaggacaacttcgacgccacc 464 ||||||||||| |||||||| || ||||| ||||| |||||||||||||||||||||| | Sbjct: 339 agcaaggagcgcgagttccccggacaggtcctccgctacgaggacaacttcgacgccaac 398 Query: 465 agcaacctctccgttataatcaaccccaccaccaagaagaccatcaccgactacggttcc 524 |||||| ||||||| ||||||||||||||||||||||||||||||||||| | ||| ||| Sbjct: 399 agcaacgtctccgtcataatcaaccccaccaccaagaagaccatcaccgagttcggctcc 458 Query: 525 cctgaggagttcctctcccaggtcggcttcctcctcggccagcagtcctacggcggcaag 584 || |||||||||||| ||||||||| |||| | || ||| ||||| ||||| ||||||| Sbjct: 459 cccgaggagttcctcgcccaggtcgacttcttgcttggcaagcaggcctactccggcaag 518 Query: 585 accgactccgagggcggcttcgagtcagacgctgtggcgacggccaacgtgctcgagagc 644 || || |||||||| || || ||||| ||||| ||||||||||| ||| | || |||||| Sbjct: 519 acagattccgagggtgggtttgagtcggacgcggtggcgacggcgaacatcctggagagc 578 Query: 645 tcggcgccggtggtggacggtaagcagtactacagcataacggtgctcaccaggaccgcg 704 ||||||||||||||||| || |||| |||||||||| |||||||||| || ||||| ||| Sbjct: 579 tcggcgccggtggtgga-gggaagc-gtactacagcgtaacggtgctgacgaggacggcg 636 Query: 705 gacggagacgagggagggaagcaccagctcatcaccgccaccgtcgccgacggcaagctc 764 ||||| |||||||| | ||||||||||| ||||| ||||||||| |||||||||||| Sbjct: 637 gacggcgacgaggg-cgcaagcaccagctgatcacggccaccgtcaacgacggcaagctg 695 Query: 765 tacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaagttcgtc 824 ||| ||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 696 tacatctgcaaggcgcaggccggcgacaagaggtggttcaagggcgccaggaagttcgtc 755 Query: 825 gagaacgccgcaggatccttcagtgtcgcat 855 |||| ||| || | |||||||| ||||||| Sbjct: 756 gagagcgcagccagctccttcagcgtcgcat 786 Score = 75.8 bits (38), Expect = 3e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 75 gcaatggcgtccacctcctgcttcctccaccagtccac 112 |||||||||||||||||||||||||||||||||||||| Sbjct: 27 gcaatggcgtccacctcctgcttcctccaccagtccac 64
>emb|CT832978.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA018K19, full insert sequence Length = 1018 Score = 496 bits (250), Expect = e-137 Identities = 452/518 (87%), Gaps = 1/518 (0%) Strand = Plus / Plus Query: 338 gaacacggacttcgtggcgtacagcggcgaggggttcaaactgatgatcccggccaagtg 397 ||||||||| ||| | || |||||||||||||||| ||| ||| |||||||| ||||||| Sbjct: 322 gaacacggagttcatcgcctacagcggcgaggggt-caagctgctgatcccgtccaagtg 380 Query: 398 gaaccccagcaaggagcgtgagttccctgggcaggtgctccgttacgaggacaacttcga 457 |||||||||||||||||| |||||||| || ||||| ||||| ||||||||||||||||| Sbjct: 381 gaaccccagcaaggagcgcgagttccccggacaggtcctccgctacgaggacaacttcga 440 Query: 458 cgccaccagcaacctctccgttataatcaaccccaccaccaagaagaccatcaccgacta 517 ||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 441 cgccaacagcaacgtctccgtcataatcaaccccaccaccaagaagaccatcaccgagtt 500 Query: 518 cggttcccctgaggagttcctctcccaggtcggcttcctcctcggccagcagtcctacgg 577 ||| ||||| |||||||||||| ||||||||| |||| | || ||| ||||| ||||| Sbjct: 501 cggctcccccgaggagttcctcgcccaggtcgacttcttgcttggcaagcaggcctactc 560 Query: 578 cggcaagaccgactccgagggcggcttcgagtcagacgctgtggcgacggccaacgtgct 637 ||||||||| || || ||||| || || ||||| ||||| ||||||||||| ||| | || Sbjct: 561 cggcaagacagattctgagggtgggtttgagtcggacgcggtggcgacggcgaacatcct 620 Query: 638 cgagagctcggcgccggtggtggacggtaagcagtactacagcataacggtgctcaccag 697 |||||||||||||||||||||| || ||||||||||||||| |||||||||| || || Sbjct: 621 ggagagctcggcgccggtggtgggagggaagcagtactacagcgtaacggtgctgacgag 680 Query: 698 gaccgcggacggagacgagggagggaagcaccagctcatcaccgccaccgtcgccgacgg 757 ||| |||||||| |||||||| || ||||||||||| ||||| ||||||||| |||||| Sbjct: 681 gacggcggacggcgacgagggcggcaagcaccagctgatcacggccaccgtcaacgacgg 740 Query: 758 caagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaa 817 |||||| ||| ||||||||||||| ||||| ||||||||||||||||||||||||| ||| Sbjct: 741 caagctgtacatctgcaaggcgcaggccggcgacaagaggtggttcaagggcgccaggaa 800 Query: 818 gttcgtcgagaacgccgcaggatccttcagtgtcgcat 855 ||||||||||| ||| || | |||||||| ||||||| Sbjct: 801 gttcgtcgagagcgcagccagctccttcagcgtcgcat 838 Score = 75.8 bits (38), Expect = 3e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 75 gcaatggcgtccacctcctgcttcctccaccagtccac 112 |||||||||||||||||||||||||||||||||||||| Sbjct: 75 gcaatggcgtccacctcctgcttcctccaccagtccac 112
>gb|AY103732.1| Zea mays PCO073407 mRNA sequence Length = 1083 Score = 476 bits (240), Expect = e-131 Identities = 471/548 (85%) Strand = Plus / Plus Query: 288 gccgctgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacggac 347 ||||| ||||||||||| |||||||| ||||||||||||||| | |||||||||||||| Sbjct: 283 gccgccgccgcctacggggaagcagccaacgtgttcggcaagaccaagaagaacacggag 342 Query: 348 ttcgtggcgtacagcggcgaggggttcaaactgatgatcccggccaagtggaaccccagc 407 | | | | ||| |||||| || ||||| ||| |||||||| ||||||||||||||||| Sbjct: 343 tacatctcctacgtcggcgacggcttcaagctgctgatcccgtccaagtggaaccccagc 402 Query: 408 aaggagcgtgagttccctgggcaggtgctccgttacgaggacaacttcgacgccaccagc 467 |||||||| |||||||| |||||||||||||| |||||||||||||||||||||| |||| Sbjct: 403 aaggagcgggagttccccgggcaggtgctccgctacgaggacaacttcgacgccaacagc 462 Query: 468 aacctctccgttataatcaaccccaccaccaagaagaccatcaccgactacggttcccct 527 ||| | ||||| || ||| | ||||| |||||||||||||| |||||||||| || || Sbjct: 463 aacgtgtccgtcatcatccagcccacgtccaagaagaccatcgccgactacggctctccc 522 Query: 528 gaggagttcctctcccaggtcggcttcctcctcggccagcagtcctacggcggcaagacc 587 |||||||||||||||||||||| || ||| |||||| |||| ||||||||||||||||| Sbjct: 523 gaggagttcctctcccaggtcgactacctgctcggcaggcaggcctacggcggcaagacc 582 Query: 588 gactccgagggcggcttcgagtcagacgctgtggcgacggccaacgtgctcgagagctcg 647 |||||||||||||| |||||| | | ||| ||||| || |||||||| || |||||||| Sbjct: 583 gactccgagggcgggttcgagaccggcgccgtggccaccgccaacgtcctggagagctcc 642 Query: 648 gcgccggtggtggacggtaagcagtactacagcataacggtgctcaccaggaccgcggac 707 | || ||| | ||||| |||||||||||| | | | |||||||||||||| |||||| Sbjct: 643 acccccgtgatcgacggcaagcagtactacgccgtgtccgtgctcaccaggacggcggac 702 Query: 708 ggagacgagggagggaagcaccagctcatcaccgccaccgtcgccgacggcaagctctac 767 || |||||||| || ||||||||||||||| | ||||||||| ||||||||||||||||| Sbjct: 703 ggcgacgagggcggcaagcaccagctcatcgcggccaccgtctccgacggcaagctctac 762 Query: 768 gtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaagttcgtcgag 827 ||||||||||||| ||||| ||||||||||||||||||||||||| |||| |||||| Sbjct: 763 atctgcaaggcgcaggccggcgacaagaggtggttcaagggcgccaggaagggagtcgag 822 Query: 828 aacgccgc 835 || ||||| Sbjct: 823 aaggccgc 830 Score = 50.1 bits (25), Expect = 0.016 Identities = 42/47 (89%), Gaps = 3/47 (6%) Strand = Plus / Plus Query: 78 atggcgtccacctcctgct---tcctccaccagtccaccgcgcgcct 121 ||||||||||||||||||| ||||||||||||| ||||| ||||| Sbjct: 70 atggcgtccacctcctgctgcctcctccaccagtcaaccgcccgcct 116
>gb|AF022732.1|AF022732 Oryza sativa 23kDa polypeptide of photosystem II mRNA, complete cds Length = 1031 Score = 394 bits (199), Expect = e-106 Identities = 469/559 (83%) Strand = Plus / Plus Query: 297 gcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacggacttcgtggcg 356 |||||||| || || |||||||||||||| ||| | || | |||||||| ||| | | Sbjct: 272 gcctacggcgaggcggcgaacgtgttcgggaagcccaaaacaaacacggagttcatcccc 331 Query: 357 tacagcggcgaggggttcaaactgatgatcccggccaagtggaaccccagcaaggagcgt 416 |||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||| Sbjct: 332 tacagcggcgaggggttcaagctgctgatcccgtccaagtggaaccccagcaaggagcgc 391 Query: 417 gagttccctgggcaggtgctccgttacgaggacaacttcgacgccaccagcaacctctcc 476 |||||||| || ||||| ||||| ||| | || |||||| ||||| ||||||| ||||| Sbjct: 392 gagttccccggacaggtcctccgctacaaagagaacttccacgccgacagcaacgtctcc 451 Query: 477 gttataatcaaccccaccaccaagaagaccatcaccgactacggttcccctgaggagttc 536 || |||||||||||| |||||||||||||| || |||| | ||| ||||| | || ||| Sbjct: 452 gtcataatcaacccccccaccaagaagaccgtcgccgagttcggctccccccaagaattc 511 Query: 537 ctctcccaggtcggcttcctcctcggccagcagtcctacggcggcaagaccgactccgag 596 ||| |||| |||| |||| | || ||| ||||| ||||| ||||||||| || |||||| Sbjct: 512 ctcccccaagtcgacttcttgcttggcaagcaggcctactccggcaagacagattccgag 571 Query: 597 ggcggcttcgagtcagacgctgtggcgacggccaacgtgctcgagagctcggcgccggtg 656 || || || ||||| ||||| ||||||||||| ||| | || |||||||||||||||||| Sbjct: 572 ggtgggtttgagtcggacgcggtggcgacggcgaacatcctggagagctcggcgccggtg 631 Query: 657 gtggacggtaagcagtactacagcataacggtgctcaccaggaccgcggacggagacgag 716 |||| || ||||||||| ||||| |||||||||| || ||||| |||||||| |||||| Sbjct: 632 gtgggagggaagcagtaccacagcgtaacggtgctgacgaggacggcggacggcgacgag 691 Query: 717 ggagggaagcaccagctcatcaccgccaccgtcgccgacggcaagctctacgtctgcaag 776 || || ||||||||||| ||||| ||||||||| |||||||||||| || |||||||| Sbjct: 692 ggcggcaagcaccagctgatcacggccaccgtcaacgacggcaagctgaacatctgcaag 751 Query: 777 gcgcaagccggagacaagaggtggttcaagggcgccaagaagttcgtcgagaacgccgca 836 ||||| |||| ||||||||||||||||||||||||| |||||| ||||||| ||| || Sbjct: 752 gcgcagcccggcgacaagaggtggttcaagggcgccaggaagtttgtcgagagcgcagcc 811 Query: 837 ggatccttcagtgtcgcat 855 | |||||||| ||||||| Sbjct: 812 agctccttcagcgtcgcat 830 Score = 75.8 bits (38), Expect = 3e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 75 gcaatggcgtccacctcctgcttcctccaccagtccac 112 |||||||||||||||||||||||||||||||||||||| Sbjct: 65 gcaatggcgtccacctcctgcttcctccaccagtccac 102
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 291 bits (147), Expect = 3e-75 Identities = 234/263 (88%) Strand = Plus / Minus Query: 285 cccgccgctgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacg 344 |||||||| || |||||||| || || |||||||||||||| ||| | |||| ||||||| Sbjct: 2170189 cccgccgccgcggcctacggcgaggcggcgaacgtgttcgggaagcccaagacgaacacg 2170130 Query: 345 gacttcgtggcgtacagcggcgaggggttcaaactgatgatcccggccaagtggaacccc 404 || ||| | || |||||||||||||||||||| ||| |||||||| |||||||||||||| Sbjct: 2170129 gagttcatcgcctacagcggcgaggggttcaagctgctgatcccgtccaagtggaacccc 2170070 Query: 405 agcaaggagcgtgagttccctgggcaggtgctccgttacgaggacaacttcgacgccacc 464 ||||||||||| |||||||| || ||||| ||||| |||||||||||||||||||||| | Sbjct: 2170069 agcaaggagcgcgagttccccggacaggtcctccgctacgaggacaacttcgacgccaac 2170010 Query: 465 agcaacctctccgttataatcaaccccaccaccaagaagaccatcaccgactacggttcc 524 |||||| ||||||| ||||||||||||||||||||||||||||||||||| | ||| ||| Sbjct: 2170009 agcaacgtctccgtcataatcaaccccaccaccaagaagaccatcaccgagttcggctcc 2169950 Query: 525 cctgaggagttcctctcccaggt 547 || |||||||||||| ||||||| Sbjct: 2169949 cccgaggagttcctcgcccaggt 2169927 Score = 250 bits (126), Expect = 9e-63 Identities = 219/250 (87%) Strand = Plus / Minus Query: 606 gagtcagacgctgtggcgacggccaacgtgctcgagagctcggcgccggtggtggacggt 665 ||||| ||||| ||||||||||| ||| | || |||||||||||||||||||||| || Sbjct: 2169522 gagtcggacgcggtggcgacggcgaacatcctggagagctcggcgccggtggtgggaggg 2169463 Query: 666 aagcagtactacagcataacggtgctcaccaggaccgcggacggagacgagggagggaag 725 ||||||||||||||| |||||||||| || ||||| |||||||| |||||||| || ||| Sbjct: 2169462 aagcagtactacagcgtaacggtgctgacgaggacggcggacggcgacgagggcggcaag 2169403 Query: 726 caccagctcatcaccgccaccgtcgccgacggcaagctctacgtctgcaaggcgcaagcc 785 |||||||| ||||| ||||||||| |||||||||||| ||| ||||||||||||| ||| Sbjct: 2169402 caccagctgatcacggccaccgtcaacgacggcaagctgtacatctgcaaggcgcaggcc 2169343 Query: 786 ggagacaagaggtggttcaagggcgccaagaagttcgtcgagaacgccgcaggatccttc 845 || ||||||||||||||||||||||||| |||||||||||||| ||| || | |||||| Sbjct: 2169342 ggcgacaagaggtggttcaagggcgccaggaagttcgtcgagagcgcagccagctccttc 2169283 Query: 846 agtgtcgcat 855 || ||||||| Sbjct: 2169282 agcgtcgcat 2169273 Score = 75.8 bits (38), Expect = 3e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 75 gcaatggcgtccacctcctgcttcctccaccagtccac 112 |||||||||||||||||||||||||||||||||||||| Sbjct: 2170384 gcaatggcgtccacctcctgcttcctccaccagtccac 2170347 Score = 46.1 bits (23), Expect = 0.26 Identities = 29/31 (93%) Strand = Plus / Minus Query: 245 cctcctcgccggtgccgccgccgtcgccgtc 275 ||||||||||||||| ||||||| ||||||| Sbjct: 16576865 cctcctcgccggtgcggccgccgccgccgtc 16576835 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 gtgccgccgccgtcgccgtca 276 ||||||||||||||||||||| Sbjct: 539778 gtgccgccgccgtcgccgtca 539798
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1351_C05 Length = 112465 Score = 291 bits (147), Expect = 3e-75 Identities = 234/263 (88%) Strand = Plus / Minus Query: 285 cccgccgctgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacg 344 |||||||| || |||||||| || || |||||||||||||| ||| | |||| ||||||| Sbjct: 38091 cccgccgccgcggcctacggcgaggcggcgaacgtgttcgggaagcccaagacgaacacg 38032 Query: 345 gacttcgtggcgtacagcggcgaggggttcaaactgatgatcccggccaagtggaacccc 404 || ||| | || |||||||||||||||||||| ||| |||||||| |||||||||||||| Sbjct: 38031 gagttcatcgcctacagcggcgaggggttcaagctgctgatcccgtccaagtggaacccc 37972 Query: 405 agcaaggagcgtgagttccctgggcaggtgctccgttacgaggacaacttcgacgccacc 464 ||||||||||| |||||||| || ||||| ||||| |||||||||||||||||||||| | Sbjct: 37971 agcaaggagcgcgagttccccggacaggtcctccgctacgaggacaacttcgacgccaac 37912 Query: 465 agcaacctctccgttataatcaaccccaccaccaagaagaccatcaccgactacggttcc 524 |||||| ||||||| ||||||||||||||||||||||||||||||||||| | ||| ||| Sbjct: 37911 agcaacgtctccgtcataatcaaccccaccaccaagaagaccatcaccgagttcggctcc 37852 Query: 525 cctgaggagttcctctcccaggt 547 || |||||||||||| ||||||| Sbjct: 37851 cccgaggagttcctcgcccaggt 37829 Score = 250 bits (126), Expect = 9e-63 Identities = 219/250 (87%) Strand = Plus / Minus Query: 606 gagtcagacgctgtggcgacggccaacgtgctcgagagctcggcgccggtggtggacggt 665 ||||| ||||| ||||||||||| ||| | || |||||||||||||||||||||| || Sbjct: 37424 gagtcggacgcggtggcgacggcgaacatcctggagagctcggcgccggtggtgggaggg 37365 Query: 666 aagcagtactacagcataacggtgctcaccaggaccgcggacggagacgagggagggaag 725 ||||||||||||||| |||||||||| || ||||| |||||||| |||||||| || ||| Sbjct: 37364 aagcagtactacagcgtaacggtgctgacgaggacggcggacggcgacgagggcggcaag 37305 Query: 726 caccagctcatcaccgccaccgtcgccgacggcaagctctacgtctgcaaggcgcaagcc 785 |||||||| ||||| ||||||||| |||||||||||| ||| ||||||||||||| ||| Sbjct: 37304 caccagctgatcacggccaccgtcaacgacggcaagctgtacatctgcaaggcgcaggcc 37245 Query: 786 ggagacaagaggtggttcaagggcgccaagaagttcgtcgagaacgccgcaggatccttc 845 || ||||||||||||||||||||||||| |||||||||||||| ||| || | |||||| Sbjct: 37244 ggcgacaagaggtggttcaagggcgccaggaagttcgtcgagagcgcagccagctccttc 37185 Query: 846 agtgtcgcat 855 || ||||||| Sbjct: 37184 agcgtcgcat 37175 Score = 75.8 bits (38), Expect = 3e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 75 gcaatggcgtccacctcctgcttcctccaccagtccac 112 |||||||||||||||||||||||||||||||||||||| Sbjct: 38286 gcaatggcgtccacctcctgcttcctccaccagtccac 38249
>gb|AF037458.1|AF037458 Fritillaria agrestis photosystem II oxygen evolving complex protein 2 precursor (psbP) mRNA, complete cds Length = 970 Score = 89.7 bits (45), Expect = 2e-14 Identities = 141/173 (81%) Strand = Plus / Plus Query: 297 gcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacggacttcgtggcg 356 |||||||||||||| || || || ||||| |||||||||| ||||| |||||| | | Sbjct: 244 gcctacggagaagctgctaatgttttcggaaaggcgaagactaacacagacttccttcca 303 Query: 357 tacagcggcgaggggttcaaactgatgatcccggccaagtggaaccccagcaaggagcgt 416 |||| ||| || || ||||| ||| |||| || || ||||||||||| || |||||| Sbjct: 304 tacaccggtgatggattcaatctgttgataccagcaaagtggaacccgagtaaggaggtc 363 Query: 417 gagttccctgggcaggtgctccgttacgaggacaacttcgacgccaccagcaa 469 |||||||| || |||||||| | ||||||||||||||||||| ||||||||| Sbjct: 364 gagttcccaggtcaggtgctaaggtacgaggacaacttcgacgtcaccagcaa 416 Score = 87.7 bits (44), Expect = 8e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 693 accaggaccgcggacggagacgagggagggaagcaccagctcatcaccgccaccgtcgcc 752 |||||||| || |||||||| || ||||| |||||||| | ||| |||| || ||| | Sbjct: 640 accaggactgctgacggagatgaaggaggcaagcaccatgttatctccgcaactgtcaca 699 Query: 753 gacggcaagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgcc 812 || || ||||||||| |||||||||| || ||||| |||||||| ||||||||||| ||| Sbjct: 700 gatggtaagctctacatctgcaaggcacaggccggggacaagagatggttcaagggagcc 759 Query: 813 aagaagtt 820 |||||||| Sbjct: 760 aagaagtt 767 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 488 ccccaccaccaagaagaccatcaccgactacggttcccctgaggagttcctctc 541 ||||||| |||||||| | ||||| |||||||| |||| |||||||||||||| Sbjct: 435 ccccacctccaagaagtcaatcactgactacggcaccccagaggagttcctctc 488
>emb|X05511.1|SOOEC23 Spinach mRNA 23 kDa protein of the photosynthetic oxygen-evolving complex (OEC) Length = 1000 Score = 79.8 bits (40), Expect = 2e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 753 gacggcaagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgcc 812 ||||| ||||| ||| |||||||||| ||||| ||||||||||| ||||||||||| || Sbjct: 731 gacggtaagctttacatctgcaaggctcaagctggagacaagagatggttcaagggtgct 790 Query: 813 aagaagttcgtcgaga 828 |||||||| ||||||| Sbjct: 791 aagaagtttgtcgaga 806 Score = 48.1 bits (24), Expect = 0.065 Identities = 36/40 (90%) Strand = Plus / Plus Query: 505 ccatcaccgactacggttcccctgaggagttcctctccca 544 ||||||| |||| |||||||||||| || ||||||||||| Sbjct: 483 ccatcacagacttcggttcccctgaagatttcctctccca 522 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 441 tacgaggacaacttcgacgccaccagcaa 469 |||||||||||||| || ||||||||||| Sbjct: 419 tacgaggacaactttgatgccaccagcaa 447
>emb|X78816.1|NPOEC23 N.pseudonarcissus mRNA for OEC 23 Length = 932 Score = 73.8 bits (37), Expect = 1e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 393 aagtggaaccccagcaaggagcgtgagttccctgggcaggtgctccgttacgaggacaac 452 ||||||||||| ||||||||| |||||||||||| |||||| | || ||||| |||||| Sbjct: 366 aagtggaacccgagcaaggaggttgagttccctggtcaggtgttgcggtacgaagacaac 425 Query: 453 ttcgacgccaccagcaa 469 ||||| |||||||||| Sbjct: 426 ttcgataccaccagcaa 442 Score = 52.0 bits (26), Expect = 0.004 Identities = 53/62 (85%) Strand = Plus / Plus Query: 759 aagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaag 818 ||||| ||| ||||||| || || || || |||||||| ||||||||||| ||||||||| Sbjct: 732 aagctttacatctgcaaagctcaggctggcgacaagagatggttcaagggagccaagaag 791 Query: 819 tt 820 || Sbjct: 792 tt 793
>gb|DQ245757.1| Zea mays clone 20159 mRNA sequence Length = 964 Score = 67.9 bits (34), Expect = 7e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 769 tctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaa 814 |||||||||| ||||| ||||||||||||||||||||||| ||||| Sbjct: 737 tctgcaaggcacaagctggagacaagaggtggttcaagggggccaa 782 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggtc 548 ||||||| ||||||| || |||||||| ||||| ||||||||||| |||||| Sbjct: 465 caagaagtccatcactgattacggttctcctgaagagttcctctctcaggtc 516
>ref|NM_100545.2| Arabidopsis thaliana PSBP (OXYGEN-EVOLVING ENHANCER PROTEIN 2); calcium ion binding (PSBP) mRNA, complete cds Length = 1085 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 759 aagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaag 818 ||||| ||| ||||||| || ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 755 aagctttacatctgcaaagcacaagctggagacaagaggtggttcaagggagccaggaaa 814 Query: 819 ttcgtcgaga 828 || ||||||| Sbjct: 815 tttgtcgaga 824 Score = 46.1 bits (23), Expect = 0.26 Identities = 44/51 (86%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 493 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 543 Score = 44.1 bits (22), Expect = 1.0 Identities = 49/58 (84%) Strand = Plus / Plus Query: 293 tgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacggacttc 350 |||||||||||| ||||| || |||||||| || ||| | |||| |||||| |||||| Sbjct: 289 tgccgcctacggtgaagctgcaaacgtgtttgggaagccaaagacgaacacagacttc 346
>gb|BT015556.1| Arabidopsis thaliana At1g06680 mRNA sequence Length = 561 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 759 aagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaag 818 ||||| ||| ||||||| || ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 463 aagctttacatctgcaaagcacaagctggagacaagaggtggttcaagggagccaggaaa 522 Query: 819 ttcgtcgaga 828 || ||||||| Sbjct: 523 tttgtcgaga 532 Score = 46.1 bits (23), Expect = 0.26 Identities = 44/51 (86%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 201 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 251
>gb|AY096487.1| Arabidopsis thaliana putative 23 kDa polypeptide of oxygen-evolving complex (OEC) (At1g06680) mRNA, complete cds Length = 823 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 759 aagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaag 818 ||||| ||| ||||||| || ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 694 aagctttacatctgcaaagcacaagctggagacaagaggtggttcaagggagccaggaaa 753 Query: 819 ttcgtcgaga 828 || ||||||| Sbjct: 754 tttgtcgaga 763 Score = 46.1 bits (23), Expect = 0.26 Identities = 44/51 (86%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 432 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 482 Score = 44.1 bits (22), Expect = 1.0 Identities = 49/58 (84%) Strand = Plus / Plus Query: 293 tgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacggacttc 350 |||||||||||| ||||| || |||||||| || ||| | |||| |||||| |||||| Sbjct: 228 tgccgcctacggtgaagctgcaaacgtgtttgggaagccaaagacgaacacagacttc 285
>gb|AY074308.1| Arabidopsis thaliana putative 23 kDa polypeptide of oxygen-evolving comlex protein (At1g06680) mRNA, complete cds Length = 1046 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 759 aagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaag 818 ||||| ||| ||||||| || ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 751 aagctttacatctgcaaagcacaagctggagacaagaggtggttcaagggagccaggaaa 810 Query: 819 ttcgtcgaga 828 || ||||||| Sbjct: 811 tttgtcgaga 820 Score = 46.1 bits (23), Expect = 0.26 Identities = 44/51 (86%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 489 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 539 Score = 44.1 bits (22), Expect = 1.0 Identities = 49/58 (84%) Strand = Plus / Plus Query: 293 tgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacggacttc 350 |||||||||||| ||||| || |||||||| || ||| | |||| |||||| |||||| Sbjct: 285 tgccgcctacggtgaagctgcaaacgtgtttgggaagccaaagacgaacacagacttc 342
>dbj|AK221243.1| Arabidopsis thaliana mRNA for PSII-P protein, partial cds, clone: RAFL24-01-M24 Length = 292 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 759 aagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaag 818 ||||| ||| ||||||| || ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 3 aagctttacatctgcaaagcacaagctggagacaagaggtggttcaagggagccaggaaa 62 Query: 819 ttcgtcgaga 828 || ||||||| Sbjct: 63 tttgtcgaga 72
>gb|AY070469.1| Arabidopsis thaliana At1g06680/F4H5_18 mRNA, complete cds Length = 937 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 759 aagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaag 818 ||||| ||| ||||||| || ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 749 aagctttacatctgcaaagcacaagctggagacaagaggtggttcaagggagccaggaaa 808 Query: 819 ttcgtcgaga 828 || ||||||| Sbjct: 809 tttgtcgaga 818 Score = 46.1 bits (23), Expect = 0.26 Identities = 44/51 (86%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 487 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 537 Score = 44.1 bits (22), Expect = 1.0 Identities = 49/58 (84%) Strand = Plus / Plus Query: 293 tgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacggacttc 350 |||||||||||| ||||| || |||||||| || ||| | |||| |||||| |||||| Sbjct: 283 tgccgcctacggtgaagctgcaaacgtgtttgggaagccaaagacgaacacagacttc 340
>gb|AY056416.1| Arabidopsis thaliana At1g06680/F4H5_18 mRNA, complete cds Length = 935 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 759 aagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaag 818 ||||| ||| ||||||| || ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 749 aagctttacatctgcaaagcacaagctggagacaagaggtggttcaagggagccaggaaa 808 Query: 819 ttcgtcgaga 828 || ||||||| Sbjct: 809 tttgtcgaga 818 Score = 46.1 bits (23), Expect = 0.26 Identities = 44/51 (86%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 487 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 537 Score = 44.1 bits (22), Expect = 1.0 Identities = 49/58 (84%) Strand = Plus / Plus Query: 293 tgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacggacttc 350 |||||||||||| ||||| || |||||||| || ||| | |||| |||||| |||||| Sbjct: 283 tgccgcctacggtgaagctgcaaacgtgtttgggaagccaaagacgaacacagacttc 340
>gb|AY087305.1| Arabidopsis thaliana clone 33922 mRNA, complete sequence Length = 1067 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 759 aagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaag 818 ||||| ||| ||||||| || ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 756 aagctttacatctgcaaagcacaagctggagacaagaggtggttcaagggagccaggaaa 815 Query: 819 ttcgtcgaga 828 || ||||||| Sbjct: 816 tttgtcgaga 825 Score = 46.1 bits (23), Expect = 0.26 Identities = 44/51 (86%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 494 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 544 Score = 44.1 bits (22), Expect = 1.0 Identities = 49/58 (84%) Strand = Plus / Plus Query: 293 tgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacggacttc 350 |||||||||||| ||||| || |||||||| || ||| | |||| |||||| |||||| Sbjct: 290 tgccgcctacggtgaagctgcaaacgtgtttgggaagccaaagacgaacacagacttc 347
>gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana BAC F12K11 from chromosome I, complete sequence Length = 93724 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 759 aagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaag 818 ||||| ||| ||||||| || ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 4922 aagctttacatctgcaaagcacaagctggagacaagaggtggttcaagggagccaggaaa 4863 Query: 819 ttcgtcgaga 828 || ||||||| Sbjct: 4862 tttgtcgaga 4853 Score = 48.1 bits (24), Expect = 0.065 Identities = 45/52 (86%) Strand = Plus / Minus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggtc 548 ||||||| ||||||| || |||||||| || || ||||||||||| |||||| Sbjct: 5529 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggtc 5478
>emb|BX813852.1|CNS0AEBT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB42ZH11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 948 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 759 aagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaag 818 ||||| ||| ||||||| || ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 737 aagctttacatctgcaaagcacaagctggagacaagaggtggttcaagggagccaggaaa 796 Query: 819 ttcgtcgaga 828 || ||||||| Sbjct: 797 tttgtcgaga 806 Score = 46.1 bits (23), Expect = 0.26 Identities = 44/51 (86%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 475 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 525 Score = 44.1 bits (22), Expect = 1.0 Identities = 49/58 (84%) Strand = Plus / Plus Query: 293 tgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacggacttc 350 |||||||||||| ||||| || |||||||| || ||| | |||| |||||| |||||| Sbjct: 271 tgccgcctacggtgaagctgcaaacgtgtttgggaagccaaagacgaacacagacttc 328
>emb|BX813677.1|CNS0AE2Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB32ZA05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 739 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 759 aagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaag 818 ||||| ||| ||||||| || ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 475 aagctttacatctgcaaagcacaagctggagacaagaggtggttcaagggagccaggaaa 534 Query: 819 ttcgtcgaga 828 || ||||||| Sbjct: 535 tttgtcgaga 544 Score = 46.1 bits (23), Expect = 0.26 Identities = 44/51 (86%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 213 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 263 Score = 44.1 bits (22), Expect = 1.0 Identities = 49/58 (84%) Strand = Plus / Plus Query: 293 tgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacggacttc 350 |||||||||||| ||||| || |||||||| || ||| | |||| |||||| |||||| Sbjct: 9 tgccgcctacggtgaagctgcaaacgtgtttgggaagccaaagacgaacacagacttc 66
>emb|BX815468.1|CNS0ACDF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS62ZH01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 922 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 759 aagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaag 818 ||||| ||| ||||||| || ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 708 aagctttacatctgcaaagcacaagctggagacaagaggtggttcaagggagccaggaaa 767 Query: 819 ttcgtcgaga 828 || ||||||| Sbjct: 768 tttgtcgaga 777 Score = 46.1 bits (23), Expect = 0.26 Identities = 44/51 (86%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 446 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 496 Score = 44.1 bits (22), Expect = 1.0 Identities = 49/58 (84%) Strand = Plus / Plus Query: 293 tgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacggacttc 350 |||||||||||| ||||| || |||||||| || ||| | |||| |||||| |||||| Sbjct: 242 tgccgcctacggtgaagctgcaaacgtgtttgggaagccaaagacgaacacagacttc 299
>emb|BX814211.1|CNS0ACB9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZH06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 994 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 759 aagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaag 818 ||||| ||| ||||||| || ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 735 aagctttacatctgcaaagcacaagctggagacaagaggtggttcaagggagccaggaaa 794 Query: 819 ttcgtcgaga 828 || ||||||| Sbjct: 795 tttgtcgaga 804 Score = 46.1 bits (23), Expect = 0.26 Identities = 44/51 (86%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 473 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 523 Score = 44.1 bits (22), Expect = 1.0 Identities = 49/58 (84%) Strand = Plus / Plus Query: 293 tgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacggacttc 350 |||||||||||| ||||| || |||||||| || ||| | |||| |||||| |||||| Sbjct: 269 tgccgcctacggtgaagctgcaaacgtgtttgggaagccaaagacgaacacagacttc 326
>emb|BX814208.1|CNS0ACB8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 661 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 759 aagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaag 818 ||||| ||| ||||||| || ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 381 aagctttacatctgcaaagcacaagctggagacaagaggtggttcaagggagccaggaaa 440 Query: 819 ttcgtcgaga 828 || ||||||| Sbjct: 441 tttgtcgaga 450 Score = 46.1 bits (23), Expect = 0.26 Identities = 44/51 (86%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 119 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 169
>emb|BX815307.1|CNS0ABGV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS50ZF04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1014 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 759 aagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaag 818 ||||| ||| ||||||| || ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 735 aagctttacatctgcaaagcacaagctggagacaagaggtggttcaagggagccaggaaa 794 Query: 819 ttcgtcgaga 828 || ||||||| Sbjct: 795 tttgtcgaga 804 Score = 44.1 bits (22), Expect = 1.0 Identities = 49/58 (84%) Strand = Plus / Plus Query: 293 tgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacggacttc 350 |||||||||||| ||||| || |||||||| || ||| | |||| |||||| |||||| Sbjct: 269 tgccgcctacggtgaagctgcaaacgtgtttgggaagccaaagacgaacacagacttc 326 Score = 42.1 bits (21), Expect = 4.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctc 541 ||||||| ||||||| || |||||||| || || ||||||||||| Sbjct: 473 caagaagtccatcactgattacggttctcccgaagagttcctctc 517
>emb|BX815232.1|CNS0ABDH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS44ZE08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 996 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 759 aagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaag 818 ||||| ||| ||||||| || ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 737 aagctttacatctgcaaagcacaagctggagacaagaggtggttcaagggagccaggaaa 796 Query: 819 ttcgtcgaga 828 || ||||||| Sbjct: 797 tttgtcgaga 806 Score = 46.1 bits (23), Expect = 0.26 Identities = 44/51 (86%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 475 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 525 Score = 44.1 bits (22), Expect = 1.0 Identities = 49/58 (84%) Strand = Plus / Plus Query: 293 tgccgcctacggagaagcagcgaacgtgttcggcaaggcgaagaagaacacggacttc 350 |||||||||||| ||||| || |||||||| || ||| | |||| |||||| |||||| Sbjct: 271 tgccgcctacggtgaagctgcaaacgtgtttgggaagccaaagacgaacacagacttc 328
>emb|BX814903.1|CNS0AAGT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS18ZA03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 570 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 759 aagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaag 818 ||||| ||| ||||||| || ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 305 aagctttacatctgcaaagcacaagctggagacaagaggtggttcaagggagccaggaaa 364 Query: 819 ttcgtcgaga 828 || ||||||| Sbjct: 365 tttgtcgaga 374 Score = 46.1 bits (23), Expect = 0.26 Identities = 44/51 (86%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 43 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 93
>emb|BX814881.1|CNS0AAH2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZA07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 709 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 759 aagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaag 818 ||||| ||| ||||||| || ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 392 aagctttacatctgcaaagcacaagctggagacaagaggtggttcaagggagccaggaaa 451 Query: 819 ttcgtcgaga 828 || ||||||| Sbjct: 452 tttgtcgaga 461 Score = 46.1 bits (23), Expect = 0.26 Identities = 44/51 (86%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 130 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 180
>gb|AC011001.2|AC011001 Arabidopsis thaliana chromosome I BAC F4H5 genomic sequence, complete sequence Length = 91608 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 759 aagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaag 818 ||||| ||| ||||||| || ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 86008 aagctttacatctgcaaagcacaagctggagacaagaggtggttcaagggagccaggaaa 85949 Query: 819 ttcgtcgaga 828 || ||||||| Sbjct: 85948 tttgtcgaga 85939 Score = 48.1 bits (24), Expect = 0.065 Identities = 45/52 (86%) Strand = Plus / Minus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggtc 548 ||||||| ||||||| || |||||||| || || ||||||||||| |||||| Sbjct: 86615 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggtc 86564
>emb|X98108.1|ATPSPB A.thaliana psbP gene Length = 1683 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 759 aagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaag 818 ||||| ||| ||||||| || ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 1439 aagctttacatctgcaaagcacaagctggagacaagaggtggttcaagggagccaggaaa 1498 Query: 819 ttcgtcgaga 828 || ||||||| Sbjct: 1499 tttgtcgaga 1508 Score = 48.1 bits (24), Expect = 0.065 Identities = 45/52 (86%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggtc 548 ||||||| ||||||| || |||||||| || || ||||||||||| |||||| Sbjct: 832 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggtc 883
>gb|AF545584.1| Xerophyta humilis PsbP mRNA, partial cds Length = 732 Score = 65.9 bits (33), Expect = 3e-07 Identities = 147/185 (79%) Strand = Plus / Plus Query: 363 ggcgaggggttcaaactgatgatcccggccaagtggaaccccagcaaggagcgtgagttc 422 ||||| |||||||| || |||||||| | || |||||| ||||| ||| ||||| | Sbjct: 283 ggcgatgggttcaaggtgttgatcccgtcgaaatggaactttagcaaagaggttgagtac 342 Query: 423 cctgggcaggtgctccgttacgaggacaacttcgacgccaccagcaacctctccgttata 482 || || || ||||| || ||||||||||||||||| |||| ||||||||| |||| || Sbjct: 343 ccaggtcaagtgctgcggtacgaggacaacttcgatgccaacagcaaccttgccgtcatg 402 Query: 483 atcaaccccaccaccaagaagaccatcaccgactacggttcccctgaggagttcctctcc 542 || | || ||| ||||||| ||||||| |||| ||||||||||| |||||||| ||| Sbjct: 403 gtccagccaaccgacaagaagtccatcactgactttggttcccctgaagagttcctttcc 462 Query: 543 caggt 547 |||| Sbjct: 463 aaggt 467 Score = 58.0 bits (29), Expect = 7e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 672 tactacagcataacggtgctcaccaggaccgcggacggagacgagggagggaagcaccag 731 ||||||| |||| |||| ||||| ||||| || ||||| || || || |||||||||||| Sbjct: 592 tactacaacatatcggttctcacgaggactgccgacggggatgaaggtgggaagcaccag 651 Query: 732 ctcatcaccgccaccgtcgccgacggcaagctctacgtctgcaaggcgcaagccggagac 791 | ||| |||| ||||| | || || ||||||||| | ||||||| || || || ||| Sbjct: 652 attatcgccgcaaccgtgtcggatgggaagctctacatttgcaaggtccaggctggtgac 711 Query: 792 aagaggtggttcaaggg 808 ||||||||||| ||||| Sbjct: 712 aagaggtggtttaaggg 728
>emb|X63007.1|LEPSBXMR L.esculentum psbX mRNA for photosystem II 23 kDa protein Length = 997 Score = 65.9 bits (33), Expect = 3e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctc 541 ||||||| |||||||||||||||| |||||||| ||||||||||| Sbjct: 516 caagaagtccatcaccgactacggctcccctgaagagttcctctc 560
>emb|Y08886.1|BJ23OESP2 B.juncea mRNA for 23 kD protein of oxygen evolving system of photosystem II Length = 754 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 769 tctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaa 814 ||||||| || ||||| ||||||||||||||||||||||| ||||| Sbjct: 566 tctgcaaagcacaagctggagacaagaggtggttcaagggagccaa 611 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggtc 548 ||||||| ||||||| || |||||||| ||||| ||||||||||| |||||| Sbjct: 294 caagaagtccatcactgattacggttctcctgaagagttcctctctcaggtc 345
>emb|X99320.1|STPSBPGEN S.tuberosum mRNA for 23 kDa oxygen evolving protein of photosystem II Length = 1089 Score = 58.0 bits (29), Expect = 7e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctc 541 ||||||| |||||||||||||||| |||||||| || |||||||| Sbjct: 490 caagaagtccatcaccgactacggctcccctgaagaattcctctc 534 Score = 44.1 bits (22), Expect = 1.0 Identities = 88/110 (80%) Strand = Plus / Plus Query: 720 gggaagcaccagctcatcaccgccaccgtcgccgacggcaagctctacgtctgcaaggcg 779 |||||||||||| | ||||| ||||| || || ||||| || ||| | |||||||| Sbjct: 713 gggaagcaccagttgatcacagccacagtgaatgatggcaaactttacatttgcaaggca 772 Query: 780 caagccggagacaagaggtggttcaagggcgccaagaagttcgtcgagaa 829 ||||| || |||||||| ||||| ||||| ||||| ||||| || ||||| Sbjct: 773 caagctggtgacaagagatggtttaagggtgccaaaaagtttgtggagaa 822
>gb|AY486007.1| Thlaspi caerulescens oxygen-evolving system subunit-like mRNA, partial sequence Length = 861 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggtc 548 ||||||| ||||||| || |||||||| ||||| ||||||||||| |||||| Sbjct: 432 caagaagtccatcactgattacggttctcctgaagagttcctctctcaggtc 483
>emb|X17213.1|SA23KDP2 S.alba psbP gene for 23 kDa polypeptide of the oxygen-evolving complex of photosystem II Length = 1936 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggtc 548 ||||||| ||||||| || |||||||| ||||| ||||||||||| |||||| Sbjct: 860 caagaagtccatcactgattacggttctcctgaagagttcctctctcaggtc 911 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 756 ggcaagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaa 814 |||||||| || ||||||| || ||||| |||||||||||||||||||| || ||||| Sbjct: 1366 ggcaagctttatatctgcaaagcacaagctggagacaagaggtggttcaaaggagccaa 1424
>emb|Y07498.1|SAOES23 Sinapis alba mRNA fragment for 23kD subunit of oxygen evolving system of photosystem II Length = 867 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggtc 548 ||||||| ||||||| || |||||||| ||||| ||||||||||| |||||| Sbjct: 388 caagaagtccatcactgattacggttctcctgaagagttcctctctcaggtc 439 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 756 ggcaagctctacgtctgcaaggcgcaagccggagacaagaggtggttcaagggcgccaa 814 |||||||| || ||||||| || ||||| |||||||||||||||||||| || ||||| Sbjct: 647 ggcaagctttatatctgcaaagcacaagctggagacaagaggtggttcaaaggagccaa 705
>ref|NM_128632.2| Arabidopsis thaliana calcium ion binding (AT2G30790) mRNA, complete cds Length = 786 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 771 tgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaagttcgtcgagaa 829 ||||| || ||||| |||||||||||||||||||| || || | ||||||||| ||||| Sbjct: 700 tgcaaagctcaagcaggagacaagaggtggttcaaaggagctaggaagttcgttgagaa 758 Score = 50.1 bits (25), Expect = 0.016 Identities = 85/105 (80%) Strand = Plus / Plus Query: 443 cgaggacaacttcgacgccaccagcaacctctccgttataatcaaccccaccaccaagaa 502 |||||||||||| |||||||||||||| |||| || || |||| || || |||||| Sbjct: 372 cgaggacaactttgacgccaccagcaatgtctctgtcatgatcactcctacagacaagaa 431 Query: 503 gaccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||| || |||||||| ||||| |||||||||| ||||| Sbjct: 432 atccatcactgattacggttctcctgaacagttcctctctcaggt 476
>gb|BT015608.1| Arabidopsis thaliana At2g30790 mRNA sequence Length = 581 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 771 tgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaagttcgtcgagaa 829 ||||| || ||||| |||||||||||||||||||| || || | ||||||||| ||||| Sbjct: 495 tgcaaagctcaagcaggagacaagaggtggttcaaaggagctaggaagttcgttgagaa 553 Score = 50.1 bits (25), Expect = 0.016 Identities = 85/105 (80%) Strand = Plus / Plus Query: 443 cgaggacaacttcgacgccaccagcaacctctccgttataatcaaccccaccaccaagaa 502 |||||||||||| |||||||||||||| |||| || || |||| || || |||||| Sbjct: 167 cgaggacaactttgacgccaccagcaatgtctctgtcatgatcactcctacagacaagaa 226 Query: 503 gaccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||| || |||||||| ||||| |||||||||| ||||| Sbjct: 227 atccatcactgattacggttctcctgaacagttcctctctcaggt 271
>gb|AC002340.3| Arabidopsis thaliana chromosome 2 BAC T11J7 genomic sequence, complete sequence Length = 79574 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Minus Query: 771 tgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaagttcgtcgagaa 829 ||||| || ||||| |||||||||||||||||||| || || | ||||||||| ||||| Sbjct: 73015 tgcaaagctcaagcaggagacaagaggtggttcaaaggagctaggaagttcgttgagaa 72957 Score = 50.1 bits (25), Expect = 0.016 Identities = 85/105 (80%) Strand = Plus / Minus Query: 443 cgaggacaacttcgacgccaccagcaacctctccgttataatcaaccccaccaccaagaa 502 |||||||||||| |||||||||||||| |||| || || |||| || || |||||| Sbjct: 73515 cgaggacaactttgacgccaccagcaatgtctctgtcatgatcactcctacagacaagaa 73456 Query: 503 gaccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||| || |||||||| ||||| |||||||||| ||||| Sbjct: 73455 atccatcactgattacggttctcctgaacagttcctctctcaggt 73411
>gb|BT022094.1| Arabidopsis thaliana At2g30790 mRNA, complete cds Length = 833 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 771 tgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaagttcgtcgagaa 829 ||||| || ||||| |||||||||||||||||||| || || | ||||||||| ||||| Sbjct: 707 tgcaaagctcaagcaggagacaagaggtggttcaaaggagctaggaagttcgttgagaa 765 Score = 50.1 bits (25), Expect = 0.016 Identities = 85/105 (80%) Strand = Plus / Plus Query: 443 cgaggacaacttcgacgccaccagcaacctctccgttataatcaaccccaccaccaagaa 502 |||||||||||| |||||||||||||| |||| || || |||| || || |||||| Sbjct: 379 cgaggacaactttgacgccaccagcaatgtctctgtcatgatcactcctacagacaagaa 438 Query: 503 gaccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||| || |||||||| ||||| |||||||||| ||||| Sbjct: 439 atccatcactgattacggttctcctgaacagttcctctctcaggt 483
>dbj|AK175934.1| Arabidopsis thaliana mRNA for putative photosystem II oxygen-evolving complex 23K protein, complete cds, clone: RAFL22-60-I02 Length = 936 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 771 tgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaagttcgtcgagaa 829 ||||| || ||||| |||||||||||||||||||| || || | ||||||||| ||||| Sbjct: 735 tgcaaagctcaagcaggagacaagaggtggttcaaaggagctaggaagttcgttgagaa 793 Score = 50.1 bits (25), Expect = 0.016 Identities = 85/105 (80%) Strand = Plus / Plus Query: 443 cgaggacaacttcgacgccaccagcaacctctccgttataatcaaccccaccaccaagaa 502 |||||||||||| |||||||||||||| |||| || || |||| || || |||||| Sbjct: 407 cgaggacaactttgacgccaccagcaatgtctctgtcatgatcactcctacagacaagaa 466 Query: 503 gaccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||| || |||||||| ||||| |||||||||| ||||| Sbjct: 467 atccatcactgattacggttctcctgaacagttcctctctcaggt 511
>dbj|AK175821.1| Arabidopsis thaliana mRNA for putative photosystem II oxygen-evolving complex 23K protein, complete cds, clone: RAFL22-42-D16 Length = 936 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 771 tgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaagttcgtcgagaa 829 ||||| || ||||| |||||||||||||||||||| || || | ||||||||| ||||| Sbjct: 735 tgcaaagctcaagcaggagacaagaggtggttcaaaggagctaggaagttcgttgagaa 793 Score = 50.1 bits (25), Expect = 0.016 Identities = 85/105 (80%) Strand = Plus / Plus Query: 443 cgaggacaacttcgacgccaccagcaacctctccgttataatcaaccccaccaccaagaa 502 |||||||||||| |||||||||||||| |||| || || |||| || || |||||| Sbjct: 407 cgaggacaactttgacgccaccagcaatgtctctgtcatgatcactcctacagacaagaa 466 Query: 503 gaccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||| || |||||||| ||||| |||||||||| ||||| Sbjct: 467 atccatcactgattacggttctcctgaacagttcctctctcaggt 511
>dbj|AK175738.1| Arabidopsis thaliana mRNA for putative photosystem II oxygen-evolving complex 23K protein, complete cds, clone: RAFL22-28-H07 Length = 936 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 771 tgcaaggcgcaagccggagacaagaggtggttcaagggcgccaagaagttcgtcgagaa 829 ||||| || ||||| |||||||||||||||||||| || || | ||||||||| ||||| Sbjct: 735 tgcaaagctcaagcaggagacaagaggtggttcaaaggagctaggaagttcgttgagaa 793 Score = 50.1 bits (25), Expect = 0.016 Identities = 85/105 (80%) Strand = Plus / Plus Query: 443 cgaggacaacttcgacgccaccagcaacctctccgttataatcaaccccaccaccaagaa 502 |||||||||||| |||||||||||||| |||| || || |||| || || |||||| Sbjct: 407 cgaggacaactttgacgccaccagcaatgtctctgtcatgatcactcctacagacaagaa 466 Query: 503 gaccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||| || |||||||| ||||| |||||||||| ||||| Sbjct: 467 atccatcactgattacggttctcctgaacagttcctctctcaggt 511
>dbj|AB043961.1| Bruguiera gymnorhiza mRNA for oxygen evolving enhancer protein 2, partial cds Length = 482 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 505 ccatcaccgactacggttcccctgaggagttcctctcccaggt 547 ||||||||||||| |||||||||||| | || ||||||||||| Sbjct: 182 ccatcaccgactatggttcccctgagcaatttctctcccaggt 224
>dbj|AB236819.1| Trifolium pratense RNA for putative PSII-P protein, partial cds, clone: C214 Length = 915 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 771 tgcaaggcgcaagccggagacaagaggtggttcaaggg 808 |||||||| ||||| ||||||||||||||||| ||||| Sbjct: 702 tgcaaggctcaagctggagacaagaggtggtttaaggg 739 Score = 42.1 bits (21), Expect = 4.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 498 aagaagaccatcaccgactacggttcccctgaggagttcct 538 |||||| ||||||| ||||||||||| ||||| ||||||| Sbjct: 429 aagaagtccatcactgactacggttcacctgaacagttcct 469
>dbj|AB032245.1| Cucumis sativus psbP mRNA for 23kDa polypeptide of the oxygen-evolving complex of photosystem II, complete cds Length = 1023 Score = 48.1 bits (24), Expect = 0.065 Identities = 30/32 (93%) Strand = Plus / Plus Query: 771 tgcaaggcgcaagccggagacaagaggtggtt 802 |||||||| ||||| ||||||||||||||||| Sbjct: 720 tgcaaggcacaagcaggagacaagaggtggtt 751
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 48.1 bits (24), Expect = 0.065 Identities = 30/32 (93%) Strand = Plus / Minus Query: 722 gaagcaccagctcatcaccgccaccgtcgccg 753 ||||||||||||| |||||||| ||||||||| Sbjct: 4994443 gaagcaccagctcctcaccgccgccgtcgccg 4994412
>emb|X15552.1|PS23KDAP Pea mRNA for 23kDa polypeptide of the oxygen evolving complex of photosystem II Length = 987 Score = 48.1 bits (24), Expect = 0.065 Identities = 36/40 (90%) Strand = Plus / Plus Query: 769 tctgcaaggcgcaagccggagacaagaggtggttcaaggg 808 |||||||||| ||||| || |||||||||||||| ||||| Sbjct: 720 tctgcaaggctcaagctggtgacaagaggtggtttaaggg 759
>dbj|D13296.1|PEAPSBP Pisum sativum mRNA for precursor for 23-kDa protein of photosystem II, complete cds Length = 1026 Score = 48.1 bits (24), Expect = 0.065 Identities = 36/40 (90%) Strand = Plus / Plus Query: 769 tctgcaaggcgcaagccggagacaagaggtggttcaaggg 808 |||||||||| ||||| || |||||||||||||| ||||| Sbjct: 764 tctgcaaggctcaagctggtgacaagaggtggtttaaggg 803
>gb|M15187.1|CREOEE2A C.reinhardtii oxygen-evolving enhancer protein 2 (OEE2) mRNA, complete cds Length = 1552 Score = 48.1 bits (24), Expect = 0.065 Identities = 24/24 (100%) Strand = Plus / Plus Query: 390 gccaagtggaaccccagcaaggag 413 |||||||||||||||||||||||| Sbjct: 418 gccaagtggaaccccagcaaggag 441
>ref|NM_001066127.1| Oryza sativa (japonica cultivar-group) Os07g0467600 (Os07g0467600) mRNA, partial cds Length = 1479 Score = 46.1 bits (23), Expect = 0.26 Identities = 29/31 (93%) Strand = Plus / Plus Query: 245 cctcctcgccggtgccgccgccgtcgccgtc 275 ||||||||||||||| ||||||| ||||||| Sbjct: 467 cctcctcgccggtgcggccgccgccgccgtc 497
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 46.1 bits (23), Expect = 0.26 Identities = 29/31 (93%) Strand = Plus / Plus Query: 245 cctcctcgccggtgccgccgccgtcgccgtc 275 ||||||||||| |||||||||||||||||| Sbjct: 10897422 cctcctcgccgccgccgccgccgtcgccgtc 10897452
>emb|AL663012.3|OSJN00217 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0069N01, complete sequence Length = 180264 Score = 46.1 bits (23), Expect = 0.26 Identities = 29/31 (93%) Strand = Plus / Plus Query: 245 cctcctcgccggtgccgccgccgtcgccgtc 275 ||||||||||| |||||||||||||||||| Sbjct: 147895 cctcctcgccgccgccgccgccgtcgccgtc 147925
>dbj|AP005180.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0003B09 Length = 161813 Score = 46.1 bits (23), Expect = 0.26 Identities = 29/31 (93%) Strand = Plus / Minus Query: 245 cctcctcgccggtgccgccgccgtcgccgtc 275 ||||||||||||||| ||||||| ||||||| Sbjct: 67485 cctcctcgccggtgcggccgccgccgccgtc 67455
>emb|AL731618.3|OSJN00269 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012A12, complete sequence Length = 122766 Score = 46.1 bits (23), Expect = 0.26 Identities = 29/31 (93%) Strand = Plus / Plus Query: 245 cctcctcgccggtgccgccgccgtcgccgtc 275 ||||||||||| |||||||||||||||||| Sbjct: 487 cctcctcgccgccgccgccgccgtcgccgtc 517
>dbj|AK065880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047C23, full insert sequence Length = 1483 Score = 46.1 bits (23), Expect = 0.26 Identities = 29/31 (93%) Strand = Plus / Plus Query: 245 cctcctcgccggtgccgccgccgtcgccgtc 275 ||||||||||||||| ||||||| ||||||| Sbjct: 471 cctcctcgccggtgcggccgccgccgccgtc 501
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 46.1 bits (23), Expect = 0.26 Identities = 29/31 (93%) Strand = Plus / Plus Query: 749 cgccgacggcaagctctacgtctgcaaggcg 779 |||||||||||||| ||||| |||||||||| Sbjct: 3966251 cgccgacggcaagccctacgactgcaaggcg 3966281
>gb|AC003101.2| Homo sapiens chromosome 17, clone RP5-41C23, complete sequence Length = 208407 Score = 44.1 bits (22), Expect = 1.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 269 cgccgtcaaggtctctcccgccgctgccgc 298 |||||||| |||||||||||||| |||||| Sbjct: 149116 cgccgtcagggtctctcccgccggtgccgc 149145
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 549 ggcttcctcctcggccagcagt 570 |||||||||||||||||||||| Sbjct: 20801386 ggcttcctcctcggccagcagt 20801407
>ref|NM_141003.2| Drosophila melanogaster CG3634-RA (CG3634), mRNA Length = 2312 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 549 ggcttcctcctcggccagcagt 570 |||||||||||||||||||||| Sbjct: 894 ggcttcctcctcggccagcagt 873
>gb|AC010064.7| Drosophila melanogaster 3L BAC RP98-22I16 (Roswell Park Cancer Institute Drosophila BAC library) complete sequence Length = 199396 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 549 ggcttcctcctcggccagcagt 570 |||||||||||||||||||||| Sbjct: 39184 ggcttcctcctcggccagcagt 39205
>gb|AY071424.1| Drosophila melanogaster RE50559 full length cDNA Length = 2327 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 549 ggcttcctcctcggccagcagt 570 |||||||||||||||||||||| Sbjct: 894 ggcttcctcctcggccagcagt 873
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 250 tcgccggtgccgccgccgtcgccgtc 275 |||||||||||| ||||||||||||| Sbjct: 2106706 tcgccggtgccgtcgccgtcgccgtc 2106731
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 250 tcgccggtgccgccgccgtcgc 271 |||||||||||||||||||||| Sbjct: 177744 tcgccggtgccgccgccgtcgc 177723
>ref|NM_001074386.1| Oryza sativa (japonica cultivar-group) Os11g0459200 (Os11g0459200) mRNA, complete cds Length = 1666 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 ctcgccggtgccgccgccgtc 269 ||||||||||||||||||||| Sbjct: 736 ctcgccggtgccgccgccgtc 756
>ref|NM_001052903.1| Oryza sativa (japonica cultivar-group) Os02g0231600 (Os02g0231600) mRNA, complete cds Length = 1672 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 tcctcgccggtgccgccgccgtcgccgtc 275 ||||||||| ||||| ||||||||||||| Sbjct: 6 tcctcgccgttgccgtcgccgtcgccgtc 34
>dbj|AK227051.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL09-59-H13 Length = 1765 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 251 cgccggtgccgccgccgtcgccgtc 275 |||||| |||||||||||||||||| Sbjct: 63 cgccggagccgccgccgtcgccgtc 87
>ref|NM_127903.3| Arabidopsis thaliana unknown protein (AT2G23390) mRNA, complete cds Length = 1749 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 251 cgccggtgccgccgccgtcgccgtc 275 |||||| |||||||||||||||||| Sbjct: 58 cgccggagccgccgccgtcgccgtc 82
>gb|AC136999.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009L15, complete sequence Length = 137570 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 250 tcgccggtgccgccgccgtcgccgt 274 |||||| |||||||||||||||||| Sbjct: 98834 tcgccgctgccgccgccgtcgccgt 98858
>gb|AC135242.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0070D14, complete sequence Length = 174780 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 ctcgccggtgccgccgccgtc 269 ||||||||||||||||||||| Sbjct: 14786 ctcgccggtgccgccgccgtc 14766
>gb|AC135864.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0071K13, complete sequence Length = 176150 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 ctcgccggtgccgccgccgtc 269 ||||||||||||||||||||| Sbjct: 131612 ctcgccggtgccgccgccgtc 131592
>gb|AC113299.14| Mus musculus chromosome 5, clone RP23-429P17, complete sequence Length = 214124 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 946 tgatttgtacatgaggatgga 966 ||||||||||||||||||||| Sbjct: 136756 tgatttgtacatgaggatgga 136776
>gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0085H08, from chromosome 3, complete sequence Length = 130656 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 cctagctaagctaagctaaac 66 ||||||||||||||||||||| Sbjct: 101506 cctagctaagctaagctaaac 101526
>gb|AC026122.14| Homo sapiens 12 BAC RP11-902D13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 184834 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 528 gaggagttcctctcccaggtc 548 ||||||||||||||||||||| Sbjct: 114443 gaggagttcctctcccaggtc 114423
>gb|AY094462.1| Arabidopsis thaliana At2g23390/F26B6.4 mRNA, complete cds Length = 1640 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 251 cgccggtgccgccgccgtcgccgtc 275 |||||| |||||||||||||||||| Sbjct: 58 cgccggagccgccgccgtcgccgtc 82
>gb|AC003040.3| Arabidopsis thaliana chromosome 2 clone F26B6 map CIC06C07, complete sequence Length = 123360 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 251 cgccggtgccgccgccgtcgccgtc 275 |||||| |||||||||||||||||| Sbjct: 14927 cgccggagccgccgccgtcgccgtc 14903
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 ctcgccggtgccgccgccgtc 269 ||||||||||||||||||||| Sbjct: 15021825 ctcgccggtgccgccgccgtc 15021805
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 250 tcgccggtgccgccgccgtcgccgt 274 |||||| |||||||||||||||||| Sbjct: 16967797 tcgccgctgccgccgccgtcgccgt 16967821
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 tcctcgccggtgccgccgccgtcgccgtc 275 ||||||||| ||||| ||||||||||||| Sbjct: 7430462 tcctcgccgttgccgtcgccgtcgccgtc 7430490
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 cctagctaagctaagctaaac 66 ||||||||||||||||||||| Sbjct: 11319316 cctagctaagctaagctaaac 11319336
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 244 ccctcctcgccggtgccgccgccgtcgcc 272 ||||||||| ||||||||||| ||||||| Sbjct: 43441 ccctcctcggcggtgccgccgtcgtcgcc 43469
>gb|AC004824.3| Homo sapiens PAC clone RP1-20B21 from 1, complete sequence Length = 137506 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 966 atgaactaagaggtcgatttccctc 990 ||||||| ||||||||||||||||| Sbjct: 103513 atgaacttagaggtcgatttccctc 103537
>gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0005J15, complete sequence Length = 159270 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 cctagctaagctaagctaaac 66 ||||||||||||||||||||| Sbjct: 30850 cctagctaagctaagctaaac 30870
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 gtgccgccgccgtcgccgtca 276 ||||||||||||||||||||| Sbjct: 141942 gtgccgccgccgtcgccgtca 141962
>dbj|AP004857.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1711_D06 Length = 87613 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 tcctcgccggtgccgccgccgtcgccgtc 275 ||||||||| ||||| ||||||||||||| Sbjct: 73503 tcctcgccgttgccgtcgccgtcgccgtc 73531
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 tcctcgccggtgccgccgccgtcgccgtc 275 ||||||||| ||||| ||||||||||||| Sbjct: 24168 tcctcgccgttgccgtcgccgtcgccgtc 24196
>emb|AJ549502.2|HSA549502 Homo sapiens peptidylarginine deiminase gene locus (PADI12346 genes) Length = 355060 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 966 atgaactaagaggtcgatttccctc 990 ||||||| ||||||||||||||||| Sbjct: 304572 atgaacttagaggtcgatttccctc 304548
>dbj|AK101656.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057F03, full insert sequence Length = 1675 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 tcctcgccggtgccgccgccgtcgccgtc 275 ||||||||| ||||| ||||||||||||| Sbjct: 9 tcctcgccgttgccgtcgccgtcgccgtc 37
>dbj|AK070697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058P13, full insert sequence Length = 1667 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 ctcgccggtgccgccgccgtc 269 ||||||||||||||||||||| Sbjct: 737 ctcgccggtgccgccgccgtc 757
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 gtgccgccgccgtcgccgtca 276 ||||||||||||||||||||| Sbjct: 93690 gtgccgccgccgtcgccgtca 93710
>gb|AY952374.1| Nicotiana benthamiana chloroplast photosynthetic oxygen-evolving protein 23 kDa subunit (psbP) mRNA, partial cds; nuclear gene for chloroplast product Length = 850 Score = 42.1 bits (21), Expect = 4.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctc 541 ||||||| ||||||| |||| ||||||||||| |||||||||| Sbjct: 426 caagaagtccatcactgactttggttcccctgaacagttcctctc 470
>emb|X64348.1|NT23WOP2B N.tabacum mRNA for 23 kDa polypeptide of water-oxidizing complex of photosystem II Length = 742 Score = 42.1 bits (21), Expect = 4.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctc 541 ||||||| ||||||| |||| ||||||||||| |||||||||| Sbjct: 260 caagaagtccatcactgactttggttcccctgaacagttcctctc 304
>emb|X62427.1|NTT232AF N.tabacum mRNA (T23-2AF) for PSII 23-kDa polypeptide Length = 1080 Score = 42.1 bits (21), Expect = 4.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 497 caagaagaccatcaccgactacggttcccctgaggagttcctctc 541 ||||||| ||||||| |||| ||||||||||| |||||||||| Sbjct: 532 caagaagtccatcactgactttggttcccctgaacagttcctctc 576
>gb|AC164611.3| Mus musculus BAC clone RP23-421C2 from chromosome 8, complete sequence Length = 188068 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 tccacctcctgcttcctccac 104 ||||||||||||||||||||| Sbjct: 81388 tccacctcctgcttcctccac 81408 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 162,834,425 Number of extensions: 8999957 Number of successful extensions: 243098 Number of sequences better than 10.0: 104 Number of HSP's gapped: 243085 Number of HSP's successfully gapped: 175 Length of query: 1063 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1040 Effective length of database: 18,503,978,556 Effective search space: 19244137698240 Effective search space used: 19244137698240 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)