>O49453:Y4844_ARATH Uncharacterized protein At4g28440 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 153
 Score =  160 bits (406), Expect = 4e-39
 Identities = 78/120 (65%), Positives = 95/120 (79%), Gaps = 3/120 (2%)
 Frame = +3

Query: 186 KRKPVFVKVDQLKPVTSGHTLVAKVLSSKTVL---QKARATGGPGPAAKPTRIAECLIGD 356
           KRKPVFVKV+QLKP T+GHTL  KV+ +  V+   +K R        ++P+RI ECLIGD
Sbjct: 17  KRKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRIVECLIGD 76

Query: 357 ETGCVLFTARNDQVDVLKPGNTVIIRNAKIDMFKGSMRLAVDKWGRVEVTEPASFGVKED 536
           ETGC+LFTARNDQVD++KPG TVI+RN++IDMFKG+MRL VDKWGR+E T  ASF VKED
Sbjct: 77  ETGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATGAASFTVKED 136

>Q5AVT9:AT222_EMENI Autophagy-related protein 22-2 - Emericella nidulans (Aspergillus|
           nidulans)
          Length = 593

 Score = 32.0 bits (71), Expect = 3.2
 Identities = 34/130 (26%), Positives = 51/130 (39%), Gaps = 21/130 (16%)
 Frame = -2

Query: 523 PKLAGSVTSTRPHLSTASLIDPLNISIFALRIMTVLPGFNTSTWSLRAVKRTQPVSSPMR 344
           P+ A S TS    LST      + +   A  ++ +L      T S  ++ ++ P + P+R
Sbjct: 250 PEKASSSTSPELQLSTRISSRGVGLGYCAAVLVQILSILLLFTLSKTSMGKSHP-TLPLR 308

Query: 343 HSAILVG-------------LAAGPGPPVA--------RAFWRTVLELSTLATSVWPLVT 227
              +LVG             L + PGPP+         R  WR           VW  V 
Sbjct: 309 FVLLLVGIWWAAFTVVCSRWLRSRPGPPLEGVTPGAGYRQKWR-----------VWLRVV 357

Query: 226 GLSWSTLTNT 197
           G +W +L NT
Sbjct: 358 GFAWKSLWNT 367

>Q9AAU1:RPOC_CAUCR DNA-directed RNA polymerase beta' chain - Caulobacter crescentus|
            (Caulobacter vibrioides)
          Length = 1396

 Score = 31.2 bits (69), Expect = 5.4
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +3

Query: 393  QVDVLKPGNTVIIRNAKIDM--FKGSMRLAVDKWGRVEVTEPASFGV 527
            +V++L+PG+T +I+   +D   F      A+ + GR  VT+P   G+
Sbjct: 1259 KVEILEPGDTGLIKGDHLDKPEFDKEQEKAIARGGRPAVTQPVLLGI 1305

>Q9HUR2:MDLC_PSEAE Benzoylformate decarboxylase - Pseudomonas aeruginosa|
          Length = 528

 Score = 30.8 bits (68), Expect = 7.0
 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
 Frame = +3

Query: 237 GHTLVAKV-LSSKTVLQKARATGGPGPAAKPTRIAECLIGDETGCVLFTARNDQVDVLKP 413
           G  LV  + L+ + +L++ R +  P P A P   A   + +E G +      D +D L P
Sbjct: 311 GDALVGDIALTLEALLEQVRPSARPLPEALPRPPA---LAEEGGPLRPETVFDVIDALAP 367

Query: 414 GNTVIIRNAKIDMFKGSMRLAVDKWGRVEVTEPASF 521
            + + +        K S       W RVE+ EP S+
Sbjct: 368 RDAIFV--------KESTSTVTAFWQRVEMREPGSY 395


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 117,904,287
Number of extensions: 2218022
Number of successful extensions: 5848
Number of sequences better than 10.0: 4
Number of HSP's gapped: 5844
Number of HSP's successfully gapped: 4
Length of query: 281
Length of database: 100,686,439
Length adjustment: 112
Effective length of query: 169
Effective length of database: 69,965,399
Effective search space: 11824152431
Effective search space used: 11824152431
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)