ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf84j02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK059165:Os01g0962400 | 168 | 3e-42 | 2 | AK108410:Os02g0831700 | 32 | 0.44 | 3 | AJ238116:Os02g0831700 | 32 | 0.44 | 4 | AK100203:Os02g0245100 | 30 | 1.7 | 5 | AK111589:Os11g0569600 | 29 | 2.8 | 6 | AK068138:Os05g0449900 | 29 | 2.8 | 7 | Os02g0765900:Os02g0765900 | 28 | 3.7 | 8 | AK107262:Os08g0514800 | 28 | 3.7 | 9 | AK110455: | 28 | 4.8 | 10 | AK119471:Os02g0511400 | 28 | 4.8 | 11 | AK067729:Os07g0495900 | 28 | 4.8 | 12 | AK065813:Os07g0495900 | 28 | 4.8 | 13 | AK121611:Os03g0116900 | 28 | 6.3 | 14 | AK106850:Os01g0293100 | 28 | 6.3 | 15 | AK100255:Os03g0116900 | 28 | 6.3 | 16 | AK066800:Os10g0377800 | 27 | 8.3 | 17 | AK058664:Os06g0220600 | 27 | 8.3 |
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>AK059165:Os01g0962400 | Length = 102 Score = 168 bits (425), Expect = 3e-42 Identities = 89/111 (80%), Positives = 90/111 (81%) Frame = +3 Query: 90 GGGGVSAPDSTPMAAEXXXXXXXXKVSFKVILTSDPKLPFKVFSVPEAAPFTAVLKFAAE 269 GGGG A KVSFK+ILTSDPKLPFKVFSVPEAAPFTAVLKFAAE Sbjct: 5 GGGGAGAAGG-------------GKVSFKIILTSDPKLPFKVFSVPEAAPFTAVLKFAAE 51 Query: 270 EFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGATAASF 422 EFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA AA F Sbjct: 52 EFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGALAAPF 102
>AK108410:Os02g0831700 | Length = 138 Score = 31.6 bits (70), Expect = 0.44 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -2 Query: 130 AMGVLSGAETPPPPPCRGS 74 A GVLS A +PPPPPC S Sbjct: 14 AAGVLSSATSPPPPPCSRS 32
>AJ238116:Os02g0831700 | Length = 138 Score = 31.6 bits (70), Expect = 0.44 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -2 Query: 130 AMGVLSGAETPPPPPCRGS 74 A GVLS A +PPPPPC S Sbjct: 14 AAGVLSSATSPPPPPCSRS 32
>AK100203:Os02g0245100 | Length = 216 Score = 29.6 bits (65), Expect = 1.7 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = -2 Query: 115 SGAETPPPPPCRGSRDRVLAPHEFR-PMRCDAMRLTSP 5 S + T PPPP RG+R R R P RC R SP Sbjct: 6 SSSSTSPPPPPRGARRRPRRCSPSRPPTRCSTARGRSP 43
>AK111589:Os11g0569600 | Length = 1102 Score = 28.9 bits (63), Expect = 2.8 Identities = 19/63 (30%), Positives = 30/63 (47%) Frame = -2 Query: 373 SEPCFKNTLPALCCGLMPTPSLVMMALVWGGTLNSSAANLSTAVKGAASGTLNTLKGSLG 194 SE +P+ C L SL + GT+ S NL++ ++ A S NTL G++ Sbjct: 237 SENSLSGGIPSSLCNLTSLSSLYLNKNTLSGTIPSCLGNLNSLLELALSD--NTLSGAIP 294 Query: 193 SEV 185 S + Sbjct: 295 SSL 297
>AK068138:Os05g0449900 | Length = 315 Score = 28.9 bits (63), Expect = 2.8 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -2 Query: 136 SAAMGVLSGAETPPPPPCRGSRDRVLAPHEFRPMRCDA 23 S GVL + PPPP RG+ PH + ++ +A Sbjct: 249 SEQFGVLVDGKPPPPPLGRGAGHHHFMPHPYAQVKIEA 286
>Os02g0765900:Os02g0765900 | Length = 626 Score = 28.5 bits (62), Expect = 3.7 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -1 Query: 176 LERHLPPSSAAAALRRHGCAVRCR 105 L+R LPPSS AA RR AVR R Sbjct: 60 LQRFLPPSSHVAASRRRPPAVRTR 83
>AK107262:Os08g0514800 | Length = 445 Score = 28.5 bits (62), Expect = 3.7 Identities = 21/70 (30%), Positives = 29/70 (41%) Frame = +2 Query: 380 PHSPRQSWSYGGVFLVIVRVNNEETYI*QE*KHVDARLYNGCNMVEYNLPPTASPMIDRM 559 P SP WSYG N++E Q V+ + G + PPTA M+D+M Sbjct: 71 PPSPVMDWSYGH------DANHKEQPAQQTNSDVEVPIRRGTRK---SRPPTAGIMLDKM 121 Query: 560 NAVCQTVPCA 589 +P A Sbjct: 122 TKAMGRMPIA 131
>AK110455: | Length = 908 Score = 28.1 bits (61), Expect = 4.8 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = -1 Query: 188 GEDHLERHLPPSSAAAA 138 G+D L RHL PSS+AAA Sbjct: 477 GDDDLSRHLSPSSSAAA 493
>AK119471:Os02g0511400 | Length = 395 Score = 28.1 bits (61), Expect = 4.8 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = -2 Query: 283 GTLNSSAANLSTAVKGAASGTLNTLKGSLGSEVRITL 173 GT+ +S + A K A TL+ LGSEV IT+ Sbjct: 188 GTVGTSRMSFYNATKAAQLRFYETLRAELGSEVGITV 224
>AK067729:Os07g0495900 | Length = 1121 Score = 28.1 bits (61), Expect = 4.8 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Frame = +3 Query: 240 FTAVLKFAAEEFKVPPQTSA---IITNDGVGINPQQSAGNVFLKHGSELRLIPRDRV 401 F ++K A+ K+ ++ + + +G+N ++ A VF K +ELRL+P D + Sbjct: 193 FAPLIKLEADYDKMMKESQSKDSLTVRWDIGLNKKRIAYFVFPKEDNELRLVPGDEL 249
>AK065813:Os07g0495900 | Length = 948 Score = 28.1 bits (61), Expect = 4.8 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Frame = +3 Query: 240 FTAVLKFAAEEFKVPPQTSA---IITNDGVGINPQQSAGNVFLKHGSELRLIPRDRV 401 F ++K A+ K+ ++ + + +G+N ++ A VF K +ELRL+P D + Sbjct: 20 FAPLIKLEADYDKMMKESQSKDSLTVRWDIGLNKKRIAYFVFPKEDNELRLVPGDEL 76
>AK121611:Os03g0116900 | Length = 563 Score = 27.7 bits (60), Expect = 6.3 Identities = 30/114 (26%), Positives = 39/114 (34%) Frame = -2 Query: 376 SSEPCFKNTLPALCCGLMPTPSLVMMALVWGGTLNSSAANLSTAVKGAASGTLNTLKGSL 197 SS PCF ALC L+ + V L L + A K ++ L G L Sbjct: 65 SSHPCFAKN--ALCRELLQS---VAATLAEAAELAARCREPPAAGKLQMQSAIDALAGKL 119 Query: 196 GSEVRITLNDTFXXXXXXXPSAAMGVLSGAETPPPPPCRGSRDRVLAPHEFRPM 35 +R GVLS A TPPPP + A + R + Sbjct: 120 DLNLR-----------DCALLVKTGVLSDAFTPPPPTDEATSTATAAQADVREL 162
>AK106850:Os01g0293100 | Length = 379 Score = 27.7 bits (60), Expect = 6.3 Identities = 28/97 (28%), Positives = 37/97 (38%), Gaps = 1/97 (1%) Frame = -2 Query: 337 CCGLMPTPSLVMMALVWGGTLNSSAANLSTAVKGAASGTLNT-LKGSLGSEVRITLNDTF 161 C LMP SL M + ++L+ AV A G LN L SL + + Sbjct: 6 CELLMPLESLEM---------DVGQSHLAAAVAAAMPGELNFHLLHSLDAAAAAASSTAA 56 Query: 160 XXXXXXXPSAAMGVLSGAETPPPPPCRGSRDRVLAPH 50 G GA+ PPPP D++ APH Sbjct: 57 SASSQPTVDYFFG---GADQQPPPPAAMQYDQLAAPH 90
>AK100255:Os03g0116900 | Length = 563 Score = 27.7 bits (60), Expect = 6.3 Identities = 30/114 (26%), Positives = 39/114 (34%) Frame = -2 Query: 376 SSEPCFKNTLPALCCGLMPTPSLVMMALVWGGTLNSSAANLSTAVKGAASGTLNTLKGSL 197 SS PCF ALC L+ + V L L + A K ++ L G L Sbjct: 65 SSHPCFAKN--ALCRELLQS---VAATLAEAAELAARCREPPAAGKLQMQSAIDALAGKL 119 Query: 196 GSEVRITLNDTFXXXXXXXPSAAMGVLSGAETPPPPPCRGSRDRVLAPHEFRPM 35 +R GVLS A TPPPP + A + R + Sbjct: 120 DLNLR-----------DCALLVKTGVLSDAFTPPPPTDEATSTATAAQADVREL 162
>AK066800:Os10g0377800 | Length = 548 Score = 27.3 bits (59), Expect = 8.3 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = -2 Query: 136 SAAMGVLSGAETPPPPPCRGSRDRVLAPHEFRPM 35 S AM L + TPPPPP S R +P P+ Sbjct: 22 SLAMPFLLSSPTPPPPPHSSSLPRSPSPRPRLPL 55
>AK058664:Os06g0220600 | Length = 189 Score = 27.3 bits (59), Expect = 8.3 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = +3 Query: 21 IASHRIGRNS*GAKTLSRDPRQGGGGGVSAPDSTPMA 131 +AS R G GA + + GGGG SA D+ P+A Sbjct: 1 LASRRDGGGCGGAVVVDVGVARRGGGGGSADDAVPVA 37 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 17,154,201 Number of extensions: 384094 Number of successful extensions: 2384 Number of sequences better than 10.0: 17 Number of HSP's gapped: 2351 Number of HSP's successfully gapped: 17 Length of query: 205 Length of database: 15,399,855 Length adjustment: 96 Effective length of query: 109 Effective length of database: 11,555,919 Effective search space: 1259595171 Effective search space used: 1259595171 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
