| Clone Name | FLbaf84h08 |
|---|---|
| Clone Library Name | barley_pub |
>Q9Y2V7:COG6_HUMAN Conserved oligomeric Golgi complex component 6 - Homo sapiens (Human)| Length = 605 Score = 347 bits (891), Expect = 1e-94 Identities = 219/667 (32%), Positives = 347/667 (52%), Gaps = 5/667 (0%) Frame = +2 Query: 236 LLASLGALSTFYEHNTPQARRNLKSSVEQRALAINRHFLDASLPAQKALDRVEGEVHALD 415 +L +L ALSTF+ N+ + RRNL+ +E+++LAIN F+ ++ L+ + +V A+ Sbjct: 1 MLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEELESISEDVQAMS 60 Query: 416 DSWKKIEEALSSCSASTGDIISTTERLQQELEVITQRQEIVSCFLRDYQLSNEEIHALR- 592 + + + L + T D+I T +LQ E + + R ++ FL +QL+++E+ LR Sbjct: 61 NCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADAFLSKFQLTSDEMSLLRG 120 Query: 593 --EEDIDEKFFKALLHVQEIHSNCKVLLRTHHQRAGLELMDMMSVYQEGAYERLCRWVQV 766 E I E FFKAL V++IH++ KVLLRT+ Q AGLE+M+ M++ QE AYERL RW Q Sbjct: 121 TREGPITEDFFKALGRVKQIHNDVKVLLRTNQQTAGLEIMEQMALLQETAYERLYRWAQS 180 Query: 767 ECKKLGDTDNPEVSELLKKAVRCLKERPVLFKYCAEEVANMRHHALFRRFISALTXXXXX 946 EC+ L ++ +VS +L +A+ L++RPVL+KY +E R + R FI ALT Sbjct: 181 ECRTLTQ-ESCDVSPVLTQAMEALQDRPVLYKYTLDEFGTARRSTVVRGFIDALTRGGPG 239 Query: 947 XXXXXIEVHAHDPLRYVGDMLGWLHQALASERELIAALLDPDAISDSGPANHRHSVREGD 1126 IE+H+HDPLRYVGDML WLHQA ASE+E + ALL +H +G Sbjct: 240 GTPRPIEMHSHDPLRYVGDMLAWLHQATASEKEHLEALL-------------KHVTTQG- 285 Query: 1127 SSKGESDFTFVLNRIFEGACRPFKVRVEQVLQSQPSLIVSYKLSNTLEFYGYTISELLGV 1306 E + V+ I EG CRP KVR+EQV+ ++P ++ YK+SN L+FY +TIS ++G Sbjct: 286 ---VEENIQEVVGHITEGVCRPLKVRIEQVIVAEPGAVLLYKISNLLKFYHHTISGIVGN 342 Query: 1307 D-TALCNTIWSLRDATQRTFFNILKSRGEKLLRYPPLVAVDLSPPPAVREGVSLLLELIS 1483 TAL TI + +++ FFN L KL+ L DL P A+ + + LL E+++ Sbjct: 343 SATALLTTIEEMHLLSKKIFFNSLSLHASKLMDKVELPPPDLGPSSALNQTLMLLREVLA 402 Query: 1484 TYNSMMVSASGKGLNFDPVISAILDPIIQMCEQSAEAQKSKGALARRGRTSSEPIGSKRD 1663 +++S +V + +F V+S +LDP++QMC SA Sbjct: 403 SHDSSVVPLDARQADFVQVLSCVLDPLLQMCTVSAS------------------------ 438 Query: 1664 SISVDAILXXXXXXXXXXXXXXXXVYLINCLSAIEEPLMDQEVATSYVKNLRSMIETHTR 1843 +++N L ++ L E ++ L+ IE H Sbjct: 439 ----------------NLGTADMATFMVNSLYMMKTTLALFEFTDRRLEMLQFQIEAHLD 482 Query: 1844 ALVDKEADSILSKCGLSSKMPYIKNYSSTDGKDDARPLADVVETSAQMLLECLKAFYGLV 2023 L++++A +L++ GLS ++ + G P D V A M+ F + Sbjct: 483 TLINEQASYVLTRVGLSYIYNTVQQHKPEQGSLANMPNLDSVTLKAAMV-----QFDRYL 537 Query: 2024 TGTEGSL-PEFEQLQVPRLRSDACYGLARALAEAYELIYKAVMDPKNCYPDPRSLVKHSP 2200 + + L P+ L ++ + AY +Y AVM+P N Y DP +++ SP Sbjct: 538 SAPDNLLIPQLNFLLSATVKEQIVKQSTELVCRAYGEVYAAVMNPINEYKDPENILHRSP 597 Query: 2201 EQIRTIL 2221 +Q++T+L Sbjct: 598 QQVQTLL 604
>Q8R3I3:COG6_MOUSE Conserved oligomeric Golgi complex component 6 - Mus musculus (Mouse)| Length = 605 Score = 342 bits (876), Expect = 6e-93 Identities = 216/667 (32%), Positives = 347/667 (52%), Gaps = 5/667 (0%) Frame = +2 Query: 236 LLASLGALSTFYEHNTPQARRNLKSSVEQRALAINRHFLDASLPAQKALDRVEGEVHALD 415 +L +L ALS F+ N+ + RRNL+ +E+R+LAIN F++ ++ L+ + +V A+ Sbjct: 1 MLEALKALSAFFVENSLRTRRNLRGDIERRSLAINEEFVNIFKDVKEELESINEDVQAMS 60 Query: 416 DSWKKIEEALSSCSASTGDIISTTERLQQELEVITQRQEIVSCFLRDYQLSNEEIHALRE 595 + + L + T D+I T +LQ E + + R ++V FL +QL+++E+ LR Sbjct: 61 SCCQDMTSRLQAAKEQTQDLIVKTTKLQAENQRLEIRAQVVDAFLAKFQLTSDEMSLLRG 120 Query: 596 E---DIDEKFFKALLHVQEIHSNCKVLLRTHHQRAGLELMDMMSVYQEGAYERLCRWVQV 766 + E FFKAL V++IH++ KVLLRT+ Q AGLE+M+ M++ QE AYERL RW Q Sbjct: 121 TRGGPVTEDFFKALGRVKQIHNDVKVLLRTNQQTAGLEIMEQMALLQETAYERLYRWAQS 180 Query: 767 ECKKLGDTDNPEVSELLKKAVRCLKERPVLFKYCAEEVANMRHHALFRRFISALTXXXXX 946 EC+ L ++ +VS +L +A+ L++RPVL+KY +E R + R FI ALT Sbjct: 181 ECRALTQ-ESCDVSAVLSQAMEALQDRPVLYKYTLDEFGTARRSTVVRGFIDALTREGPG 239 Query: 947 XXXXXIEVHAHDPLRYVGDMLGWLHQALASERELIAALLDPDAISDSGPANHRHSVREGD 1126 IE+H+HDPLRYVGDML WLHQA ASE+E + ALL +H +G Sbjct: 240 GTPRPIEMHSHDPLRYVGDMLAWLHQATASEKEHLEALL-------------KHVTAQG- 285 Query: 1127 SSKGESDFTFVLNRIFEGACRPFKVRVEQVLQSQPSLIVSYKLSNTLEFYGYTISELLGV 1306 + + V+ I EG CRP KVR+EQV+ ++P ++ YK+SN L+FY +TIS ++G Sbjct: 286 ---VKENIQEVVGHITEGVCRPLKVRIEQVILAEPGAVLLYKISNLLKFYHHTISGIVGN 342 Query: 1307 DTA-LCNTIWSLRDATQRTFFNILKSRGEKLLRYPPLVAVDLSPPPAVREGVSLLLELIS 1483 A L TI + +++ FF L KL+ L DL P A+ + ++LL ++++ Sbjct: 343 SAATLLTTIEEMHLLSKKIFFTSLSLHANKLMDKVELPPPDLGPSSALSQTLTLLRDILA 402 Query: 1484 TYNSMMVSASGKGLNFDPVISAILDPIIQMCEQSAEAQKSKGALARRGRTSSEPIGSKRD 1663 +++S +V + +F V+S LDP++QMC SA Sbjct: 403 SHDSSVVPLDARQADFVQVLSCALDPLLQMCTVSAS------------------------ 438 Query: 1664 SISVDAILXXXXXXXXXXXXXXXXVYLINCLSAIEEPLMDQEVATSYVKNLRSMIETHTR 1843 +++N L ++ L E ++ L+ IE H Sbjct: 439 ----------------NLGTADMATFMVNSLYMMKTTLALFEFTDRRLEMLQFQIEAHLD 482 Query: 1844 ALVDKEADSILSKCGLSSKMPYIKNYSSTDGKDDARPLADVVETSAQMLLECLKAFYGLV 2023 L++++A +L++ GLS YI N + + D LA++ A L + F + Sbjct: 483 TLINEQASYVLTRVGLS----YIYN-TIQQHRPDQGSLANMPNLDAVALKAAMAQFDRYL 537 Query: 2024 TGTEGSL-PEFEQLQVPRLRSDACYGLARALAEAYELIYKAVMDPKNCYPDPRSLVKHSP 2200 + + L P+ L ++ + AY ++ AVM+P N Y DP +++ SP Sbjct: 538 SAPDHLLMPQLNSLLSATVKEQIIKQSTELICRAYAEVHAAVMNPDNAYKDPENILHRSP 597 Query: 2201 EQIRTIL 2221 EQ++T+L Sbjct: 598 EQVKTLL 604
>Q9V564:COG6_DROME Putative conserved oligomeric Golgi complex component 6 - Drosophila| melanogaster (Fruit fly) Length = 630 Score = 276 bits (705), Expect = 4e-73 Identities = 194/693 (27%), Positives = 333/693 (48%), Gaps = 14/693 (2%) Frame = +2 Query: 185 VSRKLKKVLETRTDSP-DLLASLGALSTFYEHNTPQARRNLKSSVEQRALAINRHFLDAS 361 + +++ K+LE R +S D L +L LSTF+ NT Q RRNL+S +E R++ IN +FL A Sbjct: 14 IQKRVNKILEARLESDKDTLDALSGLSTFFTENTLQNRRNLRSQIEHRSVGINENFLKAF 73 Query: 362 LPAQKALDRVEGEVHALDDSWKKIEEALSSCSASTGDIISTTERLQQELEVITQRQEIVS 541 + +LD V ++ + S + ++ L + A T D+I T +Q+E + + ++I Sbjct: 74 RQVKLSLDAVCEDLDTMATSVETMKSDLETSKALTKDLIKQTNTMQRERDRLEVHKQIAQ 133 Query: 542 CFLRDYQLSNEEIHAL----REEDIDEKFFKALLHVQEIHSNCKVLLRTHHQRAGLELMD 709 FL +QLS E L ++ I FF+ L VQ IH++C++L++ +Q A +++M+ Sbjct: 134 AFLARFQLSGAEHQLLYGAAKDAPIVADFFRVLDRVQSIHADCRLLMQCGYQTAAIDIME 193 Query: 710 MMSVYQEGAYERLCRWVQVECKKLGDTDNPEVSELLKKAVRCLKERPVLFKYCAEEVANM 889 M+++QEGA ERL RW Q C+ L +N E+ L+ +A+ L++RPVLFKY +E A Sbjct: 194 EMTLHQEGALERLYRWTQNHCRSL---ENNEIGPLIVEAMSRLQDRPVLFKYVIDEYAIA 250 Query: 890 RHHALFRRFISALTXXXXXXXXXXIEVHAHDPLRYVGDMLGWLHQALASERELIAALLDP 1069 R L R+FI ALT IE+HAHDP RY+GDM WLHQ++ +E+E ++ L Sbjct: 251 RRAVLVRQFIEALTEGGPGGNPKPIELHAHDPKRYIGDMFAWLHQSIPTEKENLSLLF-- 308 Query: 1070 DAISDSGPANHRHSVREGDSSKGESDFTFVLNRIFEGACRPFKVRVEQVLQSQPSLIVSY 1249 ++ D L I +G C P KVRVE +LQ++ IV + Sbjct: 309 ---------------KKCDKQDISDQLQNALGYIADGVCHPLKVRVETILQAEKDTIVLF 353 Query: 1250 KLSNTLEFYGYTISELLGVDTALCNTIWSLRDATQRTFFNILKSRGEKLLRYP------- 1408 +SN L FY + +++ +L + L+ ++++ + L ++ +L+ P Sbjct: 354 TISNLLRFYQQIMRQVV-QGGSLEECLVELQKSSEQIYLGALAAQVRSVLQRPSGGSGLA 412 Query: 1409 -PLVAVDLSPPPAVREGVSLLLELISTYNSMMVSASGKGLNFDPVISAILDPIIQMCEQS 1585 DL PPP+V +++L E++ S+ G+ + ++S ++DP++Q ++S Sbjct: 413 LEPPQRDLVPPPSVARLLNMLKEIL----SVATMVDGRQADITKIVSCVIDPLLQSVQES 468 Query: 1586 AEAQKSKGALARRGRTSSEPIGSKRDSISVDAILXXXXXXXXXXXXXXXXVYLINCLSAI 1765 A +VD VYL+NCL + Sbjct: 469 AAHLP-----------------------TVD-----------------MGVYLLNCLHHM 488 Query: 1766 EEPLMDQEVATSYVKNLRSMIETHTRALVDKEADSILSKCGLSSKMPYIKNYSSTDGKDD 1945 + L E V+ L++ + L ++A S+++ L +++ S Sbjct: 489 QSSLAVYEYMDERVERLQAQSDAQLDTLTSEQASSLVANLNLGPIYAILQSNQSK----- 543 Query: 1946 ARPLADVVETS-AQMLLECLKAFYGLVTGTEGSLPEFEQLQVPRLRSDACYGLARALAEA 2122 +ET+ ++ + + AF L LP+ + + R+ + Sbjct: 544 -------IETNLLKIFMSKMDAFLELPDVL--LLPQVQLIMSSSHRAAVQKRSFNVIVAI 594 Query: 2123 YELIYKAVMDPKNCYPDPRSLVKHSPEQIRTIL 2221 Y+ IY+ V DP N + P L+ +PEQ+ IL Sbjct: 595 YKQIYERVHDPANGFEQPEQLLHRTPEQVAHIL 627
>Q21270:COG6_CAEEL Putative conserved oligomeric Golgi complex component 6 -| Caenorhabditis elegans Length = 642 Score = 130 bits (326), Expect = 3e-29 Identities = 114/538 (21%), Positives = 221/538 (41%), Gaps = 6/538 (1%) Frame = +2 Query: 296 RNLKSSVEQRALAINRHFLDASLPAQKALDRVEGEVHALDDSWKKIEEALSSCSASTGDI 475 R L + +E+ L +N+ +L + + + ++ + + + + + + D+ Sbjct: 54 RKLHNKLERYELRLNKEYLSEFEKINNIVQKFDELCVKMNSTCTNLSKQMETVKFKSVDL 113 Query: 476 ISTTERLQQELEVITQRQEIVSCFLRDYQLSNEEIHALREED----IDEKFFKALLHVQE 643 + T L+++ I R +++ FL +Y LS+EE+ L E + + E FFK L E Sbjct: 114 VQKTASLKEKKASIESRCNMINEFLENYSLSSEELRELDECEQSGHLSEFFFKVLERCHE 173 Query: 644 IHSNCKVLLRTHHQRAGLELMDMMSVYQEGAYERLCRWVQVECKKLGDTDNPEVSELLKK 823 I NC+ +++ A E+M+ M E ++ +C ++ E + L D+ + ++L K Sbjct: 174 IRENCRNMVQEQGHLAAFEVMEKMQKIDERSHAIICNNLKREFQNL-TVDSHQKKQILSK 232 Query: 824 AVRCLKERPVLFKYCAEEVANMRHHALFRRFISALTXXXXXXXXXXIEVHAHDPLRYVGD 1003 A + + + +F+ ++ + R L +F+ + +PL+ VGD Sbjct: 233 AFKIISQNDAVFQLAIDQYISSRSQELLNQFVEI------NKMAVQMPEGLAEPLKAVGD 286 Query: 1004 MLGWLHQALASERELIAALLDPDAISDSGPANHRHSVREGDSSKGESDFTFVLNRIFEGA 1183 ML +H+ E++L +++ + + VL+ + Sbjct: 287 MLTSIHELTEQEKQLFSSICSAE------------------------NLPIVLDECLKSL 322 Query: 1184 CRPFKVRVEQVLQSQPSLIVSYKLSNTLEFYGYTISELLGVDTALCNTIWSLRDATQRTF 1363 PFK+RVEQ+L ++ + I +K+ N L FY L+ D+ + L ++ Sbjct: 323 TSPFKIRVEQLLSTEKNAITIFKMGNILIFYANKFETLIRKDSYFTIMLADLVKTVRQVC 382 Query: 1364 FNILKSRGEKLLRYPPLVAVDLSPPPAVREGVSLLLELISTYNSMMVSASGKGLNFDP-- 1537 + + L+R DL P P VR+ +SL LI S+ V L +P Sbjct: 383 IAGINHHVDGLMRKMTSPHYDLLPVPEVRQCLSLYHGLI----SIAVKTGDLNLLLEPER 438 Query: 1538 VISAILDPIIQMCEQSAEAQKSKGALARRGRTSSEPIGSKRDSISVDAILXXXXXXXXXX 1717 + +L+P+IQ + SA KS I V Sbjct: 439 IYEYVLEPLIQTVQLSATRLKS--------------------DIEVS------------- 465 Query: 1718 XXXXXXVYLINCLSAIEEPLMDQEVATSYVKNLRSMIETHTRALVDKEADSILSKCGL 1891 V+ INCL+ I + + ++ + +MIE ++ LV + +L K G+ Sbjct: 466 ------VFTINCLTVIRSAISEISAFKKKIEMIDAMIEGNSDVLVSVQVSEMLEKSGI 517
>P53959:COG6_YEAST Conserved oligomeric Golgi complex subunit 6 - Saccharomyces| cerevisiae (Baker's yeast) Length = 839 Score = 83.6 bits (205), Expect = 4e-15 Identities = 81/412 (19%), Positives = 181/412 (43%), Gaps = 12/412 (2%) Frame = +2 Query: 290 ARRNLKSSVEQRALAINRHFLDASLPAQKALDRVEGEVHALDDSWKKIEEALSSCSASTG 469 ARR L++ +E + L + L+ P + + R+ V + + +K+ ++ + Sbjct: 195 ARRALRTDLESQLLKEHITVLEEFKPIIRRIKRLSSSVEKIQRTSEKLLSNETNEVPTNN 254 Query: 470 DIISTTERLQQELEVITQRQEIVSCFLRDYQLSNEEIHALREEDIDEKFFKALLHVQEIH 649 ++ ++ + + E + +++I+ + L+ E + ID FF+ + V I Sbjct: 255 VVLQEIDQYRLKAEQLKLKKKILLSIRDRFTLNQVEDDVITNGTIDNIFFEVVKKVINIK 314 Query: 650 SNCKVLLRTHHQRAGLELMDMMSVYQEGAYERLCRWV-------QVECKKLGD--TDNPE 802 LL + AG L+ ++ E +++ ++ + L D T E Sbjct: 315 DESSFLLTLPNLNAGNALIMGVNEILEKTNKKIFNYLIDFLYSFESSSNLLNDHGTTEQE 374 Query: 803 VSELLKKAVRCLKERPVLFKYCAEEVANMRHHALFRRFISALTXXXXXXXXXXIEVHAHD 982 + +K++ L LF + V +R ++ F+S I + AHD Sbjct: 375 SLNIFRKSLVFLSSDLELFNELLKRVTTLRSKSILDEFLSQFDMNSTTSKP--IILSAHD 432 Query: 983 PLRYVGDMLGWLHQALASERELIAALLDPDAISDSGPANHRHSVREGDSSKGESDFTFVL 1162 P+RY+GD+L +H +A+E + + +L D D + S+ + + + + +L Sbjct: 433 PIRYIGDVLASVHSIIANEADFVKSLFD---FQDEDLKDTPISILQQNKTFLKGIDNKLL 489 Query: 1163 NRIFEGACRPFKVRVEQVLQSQPSLIVSYKLSNTLEFYGYTISELLGV--DTALCNTIWS 1336 N I + ++R+EQ+++ + + I+++++ L+ Y + E G+ D+++ N + S Sbjct: 490 NDIIQSLSNSCRIRIEQIVRFEENPIINFEIVRLLKLY-RVMFERKGIQDDSSIINNLKS 548 Query: 1337 LRDATQRTFFNILKS-RGEKLLRYPPLVAVDLSPPPAVREGVSLLLELISTY 1489 L D ++ + + ++ + DL PP + E ++ L+EL Y Sbjct: 549 LEDISKNRIIGYYEDYMKQTVMAETKNSSDDLLPPEWLSEYMNKLVELFEIY 600
>Q12234:RUD3_YEAST GRIP domain-containing protein RUD3 - Saccharomyces cerevisiae| (Baker's yeast) Length = 484 Score = 39.7 bits (91), Expect = 0.060 Identities = 39/166 (23%), Positives = 74/166 (44%), Gaps = 3/166 (1%) Frame = +2 Query: 194 KLKKVLE-TRTDSPDLLASLGALSTFYEH--NTPQARRNLKSSVEQRALAINRHFLDASL 364 KLKK LE T+T++ +L +++ L+T E+ ++ + E R A+ D Sbjct: 178 KLKKKLEATKTENSELQSTIVTLNTELENLEKEQESTEEVFLEYESRIEALEDEKHDIIE 237 Query: 365 PAQKALDRVEGEVHALDDSWKKIEEALSSCSASTGDIISTTERLQQELEVITQRQEIVSC 544 K L+ E L+ +++ L + D+ + + L+Q LE + + ++ Sbjct: 238 KHSKELNTYRKEKDQLNLQVQELMIILENNKQDISDLRTERDELRQALESHEKEKAVLKN 297 Query: 545 FLRDYQLSNEEIHALREEDIDEKFFKALLHVQEIHSNCKVLLRTHH 682 L D +L EE+ REE+ E+ V+ + S + TH+ Sbjct: 298 SLNDLELKIEEVDNKREEEARERD----QEVKSLRSQLDTEIETHN 339
>P25386:USO1_YEAST Intracellular protein transport protein USO1 - Saccharomyces| cerevisiae (Baker's yeast) Length = 1790 Score = 36.6 bits (83), Expect = 0.51 Identities = 51/222 (22%), Positives = 97/222 (43%), Gaps = 11/222 (4%) Frame = +2 Query: 188 SRKLKKVLETRTDSPDL-LASLGALSTFYEHNTPQARRNLKSSVEQRALAINRHFLDASL 364 S K+K+ L+ +T + L + LS E + + R K+S E+R Sbjct: 1298 SEKIKEELDAKTTELKIQLEKITNLSKAKEKSESELSRLKKTSSEERK------------ 1345 Query: 365 PAQKALDRVEGEVHALDDSWKK----IEEALSSCSASTGDIISTTE----RLQQELEVIT 520 A++ L++++ E+ + +++K + E S+ + + I+T E RLQ E E+ Sbjct: 1346 NAEEQLEKLKNEIQIKNQAFEKERKLLNEGSSTITQEYSEKINTLEDELIRLQNENELKA 1405 Query: 521 QRQEIVSCFLRDYQLSNEEIHALREEDIDEKFFKALLHVQEIHSNCKVLL--RTHHQRAG 694 + + L LSN+E+ ++ I + L + +I N + LL ++R Sbjct: 1406 KEIDNTRSELEKVSLSNDELLEEKQNTIKSLQDEILSYKDKITRNDEKLLSIERDNKRDL 1465 Query: 695 LELMDMMSVYQEGAYERLCRWVQVECKKLGDTDNPEVSELLK 820 L + + QE + V+ KKL + + E +EL K Sbjct: 1466 ESLKEQLRAAQESKAK-----VEEGLKKLEEESSKEKAELEK 1502
>Q96T51:RUFY1_HUMAN RUN and FYVE domain-containing protein 1 - Homo sapiens (Human)| Length = 708 Score = 36.2 bits (82), Expect = 0.66 Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 12/187 (6%) Frame = +2 Query: 374 KALDRVEGEVHALDDSWKKIEEALSSCSASTGDIISTTERLQQELE--------VITQRQ 529 +A+ EG+ + + S K++EE L + + +LQQEL ++Q Sbjct: 482 EAITSFEGKTNQVMSSMKQMEERLQHSERARQGAEERSHKLQQELGGRIGALQLQLSQLH 541 Query: 530 EIVSCFLRDYQLSNEEIHALREEDIDEKFFKALL--HVQEIHSNCKVLLRTHHQRAGLEL 703 E S ++ + E+ AL+ E EK +LL +Q++ K L ++A L+ Sbjct: 542 EQCSSLEKELKSEKEQRQALQRELQHEKDTSSLLRMELQQVEGLKKELRELQDEKAELQ- 600 Query: 704 MDMMSVYQEGAYERLCRWVQVECKKLGDTDNPEVSELLKKAVRCLKERPVLFKYCAEE-- 877 + QE A + + + + KL D EV++ LK + + C +E Sbjct: 601 --KICEEQEQALQEM--GLHLSQSKLKMEDIKEVNQALKGHAWLKDDEATHCRQCEKEFS 656 Query: 878 VANMRHH 898 ++ +HH Sbjct: 657 ISRRKHH 663
>Q568M3:CRLF3_DANRE Cytokine receptor-like factor 3 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 444 Score = 35.4 bits (80), Expect = 1.1 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Frame = +2 Query: 275 HNTPQARRNLKSSVEQRALAINRHFLDASLPAQKAL-DRVEGEVHALDDSWKKIEEALSS 451 H QAR+ ++ S Q A+ RHF + + L DR+ G + +D+ L Sbjct: 31 HGLSQARKQVRGSASQTRKALQRHFQELQTAVSRLLIDRLNGLLQEVDNIELDSVSPLDD 90 Query: 452 CSASTGDIISTTERLQQELE 511 C +ST + L +E E Sbjct: 91 CQKLIEHGVSTADELLREGE 110
>O67124:RAD50_AQUAE Probable DNA double-strand break repair rad50 ATPase - Aquifex| aeolicus Length = 978 Score = 34.7 bits (78), Expect = 1.9 Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 3/180 (1%) Frame = +2 Query: 314 VEQRALAINRHFLDASLPAQKALDRVEGEVHALDDSWKKIEEALSSCSASTGDIISTTER 493 +E++ + +HF + S K +EGE+ AL++S +EE + Sbjct: 655 IEEKEKKLRKHFEELSSRKSK----LEGELSALNESINSLEEERK----------EKLKE 700 Query: 494 LQQELEVITQRQEIVSCFLRDYQLSNEEIHALREEDIDEKFFKALLHVQEIHSNCKVLLR 673 L EV +E+V +L D + E + ++ +E F L EI K Sbjct: 701 LANIYEVAKSPREVVELYLGDKEAELER----KIKEFEESFQSLKLKKSEIEEKLK---- 752 Query: 674 THHQRAGL-ELMDMMSVYQEGAYERLCRWVQVECKKLGDT--DNPEVSELLKKAVRCLKE 844 + G+ EL D+ +G YE + ++ + KKLG+ + + E LK+ KE Sbjct: 753 ---EYEGIRELSDI-----KGEYESVKTQLEEKHKKLGEVKRELEHLGERLKRKEELQKE 804
>P25506:ENV_BLVB2 Envelope glycoprotein precursor - Bovine leukemia virus (isolate| Belgium LB285) (BLV) Length = 515 Score = 34.3 bits (77), Expect = 2.5 Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 9/128 (7%) Frame = +2 Query: 1235 LIVSYKLSNTLEFYGYTISELLGVDTALCNTIWSLRDATQRTFFNILKSRGEKLLRYPPL 1414 L+ + +SN+ +++ V+T+L NT +QR FN+ S+G LL PP+ Sbjct: 227 LVYNKTISNSGPGLALPDAQIFWVNTSLFNTTQGWHHPSQRLLFNV--SQGNALL-LPPI 283 Query: 1415 VAVDLS-----PPPAVREGVSLLLELISTYNSMMVSASGKGLNFDPVISAI----LDPII 1567 V+LS PP VR + L L + +S G+N +SA+ L +I Sbjct: 284 SLVNLSTASSAPPTRVRRSPAAALTL-----GLALSVGLTGINV--AVSALSHQRLTSLI 336 Query: 1568 QMCEQSAE 1591 + EQ + Sbjct: 337 HVLEQDQQ 344
>P49025:CTRO_MOUSE Citron Rho-interacting kinase - Mus musculus (Mouse)| Length = 2055 Score = 34.3 bits (77), Expect = 2.5 Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 21/196 (10%) Frame = +2 Query: 185 VSRKLKKVLETRTDSPDLLASLGALSTFYEHNTPQARRNLKSSVEQRALAINRHFLDASL 364 + KL+K ++ T++ +LL N QA+ + +E+ NR D+S Sbjct: 640 LQEKLEKAVKASTEATELL-----------QNIRQAKERAERELEKLH---NRE--DSSE 683 Query: 365 PAQKALDRVEGEVHALDDSWKKIEEALSSCSASTGDIISTTERLQQELEVITQRQEIVSC 544 +K L E H+L++ K++E + DI + +E++QQ + I + +E Sbjct: 684 GIKKKLVEAEERRHSLENKVKRLETMERRENRLKDDIQTKSEQIQQMADKILELEE---- 739 Query: 545 FLRDYQLSNE--EIHALREEDIDEKFFKAL-------------------LHVQEIHSNCK 661 R+ Q+S + E+H ++E E+ K L H +E H K Sbjct: 740 KHREAQVSAQHLEVHLKQKEQHYEEKIKVLDNQIKKDLADKESLENMMQRHEEEAHEKGK 799 Query: 662 VLLRTHHQRAGLELMD 709 +L Q+A + MD Sbjct: 800 IL---SEQKAMINAMD 812
>P12270:TPR_HUMAN Nucleoprotein TPR - Homo sapiens (Human)| Length = 2349 Score = 33.5 bits (75), Expect = 4.3 Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 11/120 (9%) Frame = +2 Query: 350 LDASLPAQKALDRVEGEVHALDDSWKKIEEALSSCSASTGDIISTTERLQQELEVITQRQ 529 L A K L+ + A+ + + +E L A D+I T ERL QELE +T+ Sbjct: 89 LKALTEKNKELEIAQDRNIAIQSQFTRTKEELE---AEKRDLIRTNERLSQELEYLTEDV 145 Query: 530 EIVSCFLRDYQLSNEEIH----ALREEDIDEKF-------FKALLHVQEIHSNCKVLLRT 676 + ++ L++ + E+ L+ D+ K+ K LLH Q N ++ +T Sbjct: 146 KRLNEKLKESNTTKGELQLKLDELQASDVSVKYREKRLEQEKELLHSQNTWLNTELKTKT 205
>Q96P64:CTLF1_HUMAN Centaurin-gamma-like family member 1 - Homo sapiens (Human)| Length = 663 Score = 33.5 bits (75), Expect = 4.3 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 7/75 (9%) Frame = +2 Query: 1427 LSPPPAVREGVSLLLELISTYNSMMVSASGKGLNFDPVISAILDPIIQMCE-------QS 1585 L+PPP+ L+ ST N M+VSA+G+ +F+ D +Q + QS Sbjct: 366 LNPPPSPHANKKKHLKKKSTNNFMIVSATGQTWHFEATTYEERDAWVQAIQSQILASLQS 425 Query: 1586 AEAQKSKGALARRGR 1630 E+ KSK L + + Sbjct: 426 CESSKSKSQLTSQSK 440
>P19199:POL_COYMV Putative polyprotein [Contains: Coat protein; Protease - Commelina| yellow mottle virus (CoYMV) Length = 1886 Score = 33.1 bits (74), Expect = 5.6 Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 1/135 (0%) Frame = +2 Query: 197 LKKVLETRTDSPDLLASLGALSTFYEHNTPQAR-RNLKSSVEQRALAINRHFLDASLPAQ 373 L+ E R DS + L S YE+ TPQ+ +L + R+ + + + + Sbjct: 413 LEHAYEQRCDSDESLQSGDPRK--YEYPTPQSSPEHLDNESRSRSSSASSTSMQDDV--- 467 Query: 374 KALDRVEGEVHALDDSWKKIEEALSSCSASTGDIISTTERLQQELEVITQRQEIVSCFLR 553 + + R+ E+ KK ++ALSS + I E +Q E TQ + + Sbjct: 468 EEIVRLMKEMRMKKQKKKKAQQALSSQAQEEPIIEENIEENKQAQEEPTQEEIPTHKENQ 527 Query: 554 DYQLSNEEIHALREE 598 ++ NEEIH EE Sbjct: 528 PEEIQNEEIHVFEEE 542
>Q9NFZ4:TPM_LEPDS Tropomyosin - Lepidoglyphus destructor (Fodder mite)| Length = 284 Score = 32.7 bits (73), Expect = 7.3 Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 17/123 (13%) Frame = +2 Query: 278 NTPQARRNLKSSVEQRALAINRHFLDASLPA----------QKALDRVEGEVHALDDSWK 427 N QA + K + RA + DA+L A QK + ++E E+ + +S Sbjct: 6 NKMQAMKLEKDNAIDRAEIAEQKSRDANLRAEKSEEEVRGLQKKIQQIENELDQVQESLT 65 Query: 428 ----KIEEALSSCSASTGDIISTTERLQ---QELEVITQRQEIVSCFLRDYQLSNEEIHA 586 K+EE S + GD+ + R+Q ++LE R +I + L + S +E Sbjct: 66 QANTKLEEKEKSLQTAEGDVAALNRRIQLIEEDLERSEGRLKIATSKLEEASQSADESER 125 Query: 587 LRE 595 +R+ Sbjct: 126 MRK 128
>P50468:M21_STRPY M protein, serotype 2.1 precursor - Streptococcus pyogenes| Length = 407 Score = 32.7 bits (73), Expect = 7.3 Identities = 48/218 (22%), Positives = 97/218 (44%), Gaps = 9/218 (4%) Frame = +2 Query: 266 FYEHNTPQARRNLKSSVEQRALAINRHFLDASLPAQKALD----RVEGEVHALDDSWKKI 433 + E Q + + + + + R L+AS A+K L+ +++ E + S K + Sbjct: 143 YQEQLQKQQQLEKEKQISEASRKSLRRDLEASRAAKKDLEAEHQKLKEEKQISEASRKSL 202 Query: 434 EEALSSCSASTGDIISTTERLQQELEVITQRQEIVSCFLRDYQLSNEEIHA----LREE- 598 L + A+ D+ + ++L++E ++ ++ +S L + + +++ A L+EE Sbjct: 203 RRDLEASRAAKKDLEAEHQKLKEEKQISEASRQGLSRDLEASRAAKKDLEAEHQKLKEEK 262 Query: 599 DIDEKFFKALLHVQEIHSNCKVLLRTHHQRAGLELMDMMSVYQEGAYERLCRWVQVECKK 778 I E + L E K + A +L A E+L + ++ E KK Sbjct: 263 QISEASRQGLSRDLEASREAKKKVEADLAEANSKLQ---------ALEKLNKELE-EGKK 312 Query: 779 LGDTDNPEVSELLKKAVRCLKERPVLFKYCAEEVANMR 892 L + + E+ L+ + LKE+ L K AEE+A ++ Sbjct: 313 LSEKEKAELQAKLEAEAKALKEQ--LAKQ-AEELAKLK 347
>Q5SRD3:CTLF5_HUMAN Centaurin gamma-like family member 5 - Homo sapiens (Human)| Length = 663 Score = 32.7 bits (73), Expect = 7.3 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 7/70 (10%) Frame = +2 Query: 1427 LSPPPAVREGVSLLLELISTYNSMMVSASGKGLNFDPVISAILDPIIQMCE-------QS 1585 L+PPP+ L+ ST N M+VSA+G+ +F+ D +Q + QS Sbjct: 366 LNPPPSPHANKKKHLKKKSTNNFMIVSATGQTWHFEATTYEERDAWVQAIQSQILASLQS 425 Query: 1586 AEAQKSKGAL 1615 E+ KSK L Sbjct: 426 CESSKSKSQL 435
>Q5VUJ5:CTLF4_HUMAN Centaurin-gamma-like family member 4 - Homo sapiens (Human)| Length = 663 Score = 32.7 bits (73), Expect = 7.3 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 7/70 (10%) Frame = +2 Query: 1427 LSPPPAVREGVSLLLELISTYNSMMVSASGKGLNFDPVISAILDPIIQMCE-------QS 1585 L+PPP+ L+ ST N M+VSA+G+ +F+ D +Q + QS Sbjct: 366 LNPPPSPHANKKKHLKKKSTNNFMIVSATGQTWHFEATTYEERDAWVQAIQSQILASLQS 425 Query: 1586 AEAQKSKGAL 1615 E+ KSK L Sbjct: 426 CESSKSKSQL 435
>Q5VW22:CTLF3_HUMAN Centaurin-gamma-like family member 3 - Homo sapiens (Human)| Length = 663 Score = 32.7 bits (73), Expect = 7.3 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 7/70 (10%) Frame = +2 Query: 1427 LSPPPAVREGVSLLLELISTYNSMMVSASGKGLNFDPVISAILDPIIQMCE-------QS 1585 L+PPP+ L+ ST N M+VSA+G+ +F+ D +Q + QS Sbjct: 366 LNPPPSPHANKKKHLKKKSTNNFMIVSATGQTWHFEATTYEERDAWVQAIQSQILASLQS 425 Query: 1586 AEAQKSKGAL 1615 E+ KSK L Sbjct: 426 CESSKSKSQL 435
>O18416:TPM_DERPT Tropomyosin - Dermatophagoides pteronyssinus (House-dust mite)| Length = 284 Score = 32.3 bits (72), Expect = 9.6 Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 17/123 (13%) Frame = +2 Query: 278 NTPQARRNLKSSVEQRALAINRHFLDASLPA----------QKALDRVEGEVHALDDSWK 427 N QA + K + RA + DA+L A QK + ++E E+ + + Sbjct: 6 NKMQAMKLEKDNAIDRAEIAEQKARDANLRAEKSEEEVRALQKKIQQIENELDQVQEQLS 65 Query: 428 ----KIEEALSSCSASTGDIISTTERLQ---QELEVITQRQEIVSCFLRDYQLSNEEIHA 586 K+EE + + GD+ + R+Q ++LE +R +I + L + S +E Sbjct: 66 AANTKLEEKEKALQTAEGDVAALNRRIQLIEEDLERSEERLKIATAKLEEASQSADESER 125 Query: 587 LRE 595 +R+ Sbjct: 126 MRK 128
>P38904:SPP41_YEAST Protein SPP41 - Saccharomyces cerevisiae (Baker's yeast)| Length = 1435 Score = 32.3 bits (72), Expect = 9.6 Identities = 52/217 (23%), Positives = 83/217 (38%), Gaps = 9/217 (4%) Frame = +2 Query: 1331 WSLRDATQRTFFNI-LKS--RGEKLLRYPPLVAVDLSP---PPAVREGVSLLLELIS-TY 1489 W L D++ ++ LK+ EK+ +PP P P A R+ + + + T Sbjct: 766 WPLSDSSASQNYDAHLKTVVHKEKIPFHPPWTIPSQPPFALPVARRKKIPNIKKYRKRTN 825 Query: 1490 NSMMVSASGKGLNFDPVISAILDPIIQMCEQSAEAQKSKGALARRGRTSSEPIGSKRDSI 1669 NS VS G + ++ AIL PII + +A++Q + GA R I S Sbjct: 826 NSFRVSKEGTASTRNRILPAILLPIINTLKAAAKSQTAAGATPEEARKRLATIIQHAKST 885 Query: 1670 SVDAILXXXXXXXXXXXXXXXXVYLINCLSAIEEPLMDQEVAT--SYVKNLRSMIETHTR 1843 + A L N + A E+AT S +KN MI Sbjct: 886 VIRAALQARK----------------NSMQAAHSKGTTTELATTASRMKNPLKMIPIFNT 929 Query: 1844 ALVDKEADSILSKCGLSSKMPYIKNYSSTDGKDDARP 1954 + V ++ D L +++ SS++ D A P Sbjct: 930 SRVKQQLDKQLPARSAGTEI------SSSESPDKATP 960
>Q8BIJ7:RUFY1_MOUSE RUN and FYVE domain-containing protein 1 - Mus musculus (Mouse)| Length = 712 Score = 32.3 bits (72), Expect = 9.6 Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 12/187 (6%) Frame = +2 Query: 374 KALDRVEGEVHALDDSWKKIEEALSSCSASTGDIISTTERLQQELE--------VITQRQ 529 +A+ EG+ + S K++EE L + + +LQQEL ++Q + Sbjct: 486 EAIASFEGKTTQVMSSMKQMEERLQQAERARQAAEERSHKLQQELSGRGSALQLQLSQLR 545 Query: 530 EIVSCFLRDYQLSNEEIHALREEDIDEKFFKALL--HVQEIHSNCKVLLRTHHQRAGLEL 703 + S ++ + E+ AL+ E EK LL +Q++ K L ++A L Sbjct: 546 DQCSGLEKELKSEKEQRQALQRELQREKDTSCLLQTELQQVEGLKKELRELQDEKAELR- 604 Query: 704 MDMMSVYQEGAYERLCRWVQVECKKLGDTDNPEVSELLKKAVRCLKERPVLFKYCAEE-- 877 + QE A + + + + KL D EV++ LK + K C ++ Sbjct: 605 --KVCEEQEQALQEM--GLHLSQSKLKMEDIKEVNKALKGHTWLKDDEATHCKQCEKDFS 660 Query: 878 VANMRHH 898 ++ +HH Sbjct: 661 ISRRKHH 667
>Q14789:GOGB1_HUMAN Golgin subfamily B member 1 - Homo sapiens (Human)| Length = 3259 Score = 32.3 bits (72), Expect = 9.6 Identities = 25/98 (25%), Positives = 46/98 (46%) Frame = +2 Query: 362 LPAQKALDRVEGEVHALDDSWKKIEEALSSCSASTGDIISTTERLQQELEVITQRQEIVS 541 L ++ DR+ EVH D+ K+ E L S +AS + + ER++ E E ++++ Sbjct: 1690 LELEEENDRLRAEVHPAGDTAKECMETLLSSNASMKEEL---ERVKMEYETLSKK---FQ 1743 Query: 542 CFLRDYQLSNEEIHALREEDIDEKFFKALLHVQEIHSN 655 + + +EE+ L+ + +A L E H N Sbjct: 1744 SLMSEKDSLSEEVQDLKHQIEGNVSKQANLEATEKHDN 1781
>Q8BL66:EEA1_MOUSE Early endosome antigen 1 - Mus musculus (Mouse)| Length = 1411 Score = 32.3 bits (72), Expect = 9.6 Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 2/89 (2%) Frame = +2 Query: 272 EHNTPQA-RRNLKSSVEQRALAINRHFLDASLPA-QKALDRVEGEVHALDDSWKKIEEAL 445 +HN A R+ L++S+ QR L + L A L A + +L R +GE+ ++ +K+ E L Sbjct: 324 KHNEESASRKTLQASLHQRDLDCQQ--LQARLTASESSLQRAQGELSEKAEAAQKLREEL 381 Query: 446 SSCSASTGDIISTTERLQQELEVITQRQE 532 ++ ST + L+ E++ + Q++E Sbjct: 382 R-------EVESTRQHLKVEVKQLQQQRE 403
>Q8CJ40:CROCC_MOUSE Rootletin - Mus musculus (Mouse)| Length = 2009 Score = 32.3 bits (72), Expect = 9.6 Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 24/127 (18%) Frame = +2 Query: 287 QARRNLKSSVEQRALAINRHFL------DASLPAQKALDRVEGEVHALDDSWKKIEEALS 448 ++ NL+S V+ A+ + D +L QKAL E + L + +ALS Sbjct: 1712 ESEGNLRSKVQSLTDALTQSSASLSSTQDKNLHLQKALSTCEHDRQVLQERLDAARQALS 1771 Query: 449 SC---SASTGDIISTTE---------------RLQQELEVITQRQEIVSCFLRDYQLSNE 574 S+S G+ + T +LQQ + + QRQE + LR Q E Sbjct: 1772 EARRQSSSLGEQVQTLRGELASLELQRGDAEGQLQQLQQALRQRQEGEAMALRSVQKLQE 1831 Query: 575 EIHALRE 595 E L+E Sbjct: 1832 ERRLLQE 1838
>Q5TZA2:CROCC_HUMAN Rootletin - Homo sapiens (Human)| Length = 2017 Score = 32.3 bits (72), Expect = 9.6 Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 18/118 (15%) Frame = +2 Query: 296 RNLKSSVEQRALAINRHFLDASLPAQKALDRVEGEVHALDDSWKKIEEALSSC---SAST 466 R L ++ Q + ++N D +L QKAL E + L + +ALS S+S Sbjct: 1729 RGLTEALAQSSASLNST-RDKNLHLQKALTACEHDRQVLQERLDAARQALSEARKQSSSL 1787 Query: 467 GDIISTTE---------------RLQQELEVITQRQEIVSCFLRDYQLSNEEIHALRE 595 G+ + T +LQQ EV+ QRQE + L Q +E L+E Sbjct: 1788 GEQVQTLRGEVADLELQRVEAEGQLQQLREVLRQRQEGEAAALNTVQKLQDERRLLQE 1845
>Q9M439:BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplast precursor| - Arabidopsis thaliana (Mouse-ear cress) Length = 388 Score = 32.3 bits (72), Expect = 9.6 Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 6/90 (6%) Frame = +2 Query: 365 PAQKALDRVEG----EVHALDDSWKKIEEALSSCSAST--GDIISTTERLQQELEVITQR 526 P KAL R + +V LD KK E SSC+ G IST LE IT++ Sbjct: 242 PVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNVFVVKGRTISTPATNGTILEGITRK 301 Query: 527 QEIVSCFLRDYQLSNEEIHALREEDIDEKF 616 + + YQ+ + +H D DE F Sbjct: 302 SVMEIASDQGYQVVEKAVHVDEVMDADEVF 331 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 413,645,987 Number of extensions: 8810914 Number of successful extensions: 24779 Number of sequences better than 10.0: 28 Number of HSP's gapped: 24739 Number of HSP's successfully gapped: 31 Length of query: 821 Length of database: 100,686,439 Length adjustment: 122 Effective length of query: 699 Effective length of database: 67,222,449 Effective search space: 46988491851 Effective search space used: 46988491851 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)