ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf86o06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q851Y7:GRXS7_ORYSJ Monothiol glutaredoxin-S7, chloroplast precur... 32 0.51
2P83714:CTF2_MOUSE Cardiotrophin-2 precursor - Mus musculus (Mouse) 30 2.5
3Q84Y95:GRS14_ARATH Monothiol glutaredoxin-S14, chloroplast precu... 30 2.5
4Q9JJ74:RAMP1_RAT Receptor activity-modifying protein 1 precursor... 29 5.6

>Q851Y7:GRXS7_ORYSJ Monothiol glutaredoxin-S7, chloroplast precursor - Oryza sativa|
           subsp. japonica (Rice)
          Length = 168
 Score = 32.3 bits (72), Expect = 0.51
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +3

Query: 3   YKSGELQETLEKAMCS 50
           YKSGELQETLEKAM S
Sbjct: 153 YKSGELQETLEKAMLS 168



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>P83714:CTF2_MOUSE Cardiotrophin-2 precursor - Mus musculus (Mouse)|
          Length = 204

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 84 VYCMMSLVICAKSTLLSPASPAVPHS 7
          +YC+++  +C  S LL P SPA P S
Sbjct: 1  MYCLLATPLCLLSLLLPPLSPAAPIS 26



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>Q84Y95:GRS14_ARATH Monothiol glutaredoxin-S14, chloroplast precursor - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 173

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +3

Query: 3   YKSGELQETLEKAMCS 50
           +K+GELQE +EKAMCS
Sbjct: 158 FKTGELQEEVEKAMCS 173



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>Q9JJ74:RAMP1_RAT Receptor activity-modifying protein 1 precursor - Rattus norvegicus|
           (Rat)
          Length = 148

 Score = 28.9 bits (63), Expect = 5.6
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
 Frame = -3

Query: 247 THCTKFTIAKVHCTF----VTRYFIFLNHLQLSDC 155
           THCTK    K+ C +    V ++FI ++H   S C
Sbjct: 70  THCTKLVANKIGCFWPNPEVDKFFIAVHHRYFSKC 104


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 52,061,012
Number of extensions: 1124138
Number of successful extensions: 2312
Number of sequences better than 10.0: 4
Number of HSP's gapped: 2312
Number of HSP's successfully gapped: 4
Length of query: 95
Length of database: 100,686,439
Length adjustment: 65
Effective length of query: 30
Effective length of database: 82,857,264
Effective search space: 2485717920
Effective search space used: 2485717920
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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