>LOC_Os01g01307:12001.t06760:unspliced-genomic translocon-associated protein beta containing protein, expressed|
Length = 2529
Score = 77.1 bits (162), Expect(5) = 2e-62
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = +3 / +1
Query: 114 PFLVAHKKVALSRPKPGVERLAVSLDLYNQGSA 212
PFLVAHKKV+LSRPKPGVERLAVSLDLYNQGSA
Sbjct: 172 PFLVAHKKVSLSRPKPGVERLAVSLDLYNQGSA 270
Score = 75.3 bits (158), Expect(5) = 2e-62
Identities = 29/33 (87%), Positives = 33/33 (100%)
Frame = +3 / +3
Query: 213 TAYDVAINDDSWPKEAFELVSGEVSKTLERLEP 311
TAYDV+INDD+WPKEAFELVSGE+SKTLERL+P
Sbjct: 1407 TAYDVSINDDTWPKEAFELVSGEMSKTLERLDP 1505
Score = 71.6 bits (150), Expect(5) = 2e-62
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +2 / +3
Query: 311 WCHCFARVCIGEQNTGKVPSFTCCHQVPCCHKGCTSG 421
WCHCFA +C+G+Q+TG+V FTC + + C HKGC SG
Sbjct: 1590 WCHCFACICLGDQSTGQVSRFTCGYYLSCSHKGCASG 1700
Score = 55.1 bits (114), Expect(5) = 2e-62
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +3 / +3
Query: 414 LQEAYSTPIPALDILAERPPVKKFEW 491
++EAYSTPI ALD+LAERPP KKFEW
Sbjct: 1806 VKEAYSTPILALDVLAERPPEKKFEW 1883
Score = 48.3 bits (99), Expect(5) = 2e-62
Identities = 24/52 (46%), Positives = 33/52 (63%)
Frame = +2 / +1
Query: 497 ETCCEVRSTGVCRFLRSGLHLPGREPIEIFWLKVWQEEALIYLSIIHGSPFL 652
E C EVR GV +L ++LPG +P++I K QEEALIYL I+ + F+
Sbjct: 2107 EACGEVRVAGVRCWLGWSVYLPGCKPVKIQRCKSKQEEALIYLPTIYKAVFV 2262
Score = 76.2 bits (160), Expect(5) = 2e-54
Identities = 31/33 (93%), Positives = 31/33 (93%)
Frame = -1 / -2
Query: 211 ADPWL*RSRETARRSTPGLGRERATFLCATRKG 113
ADPWL*RSRETARRSTPGLGRE TFLCATRKG
Sbjct: 269 ADPWL*RSRETARRSTPGLGRESETFLCATRKG 171
Score = 64.8 bits (135), Expect(5) = 2e-54
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = -1 / -1
Query: 628 R*IDQRLFLPDFEPEDFDGLATR*MKPRTKETTDTSAPYFATS 500
R + QRLFL F P DFDGLATR*+ TK TTDTS PYFATS
Sbjct: 2238 RQVYQRLFLLAFAPLDFDGLATR*INTPTKPTTDTSDPYFATS 2110
Score = 56.5 bits (117), Expect(5) = 2e-54
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = -1 / -3
Query: 328 CEAVAPGSSLSKVFETSPETSSNASLGQESSLMATSYAV 212
C GSSLS VF+ SPETSSNAS GQ SSLM TS AV
Sbjct: 1522 CMKCTHGSSLSNVFDISPETSSNASFGQVSSLMLTS*AV 1406
Score = 54.2 bits (112), Expect(5) = 2e-54
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = -1 / -2
Query: 406 FVATRYLMTAGEAWNLPCVLLSNTNACEAVAP 311
FV TR ++TAGE NLPC L+S TNACEAV P
Sbjct: 1685 FVGTR*VITAGEP*NLPCTLVSKTNACEAVTP 1590
Score = 48.7 bits (100), Expect(5) = 2e-54
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -3 / -2
Query: 491 PFKLLHWRPFSKNVKGRDGS*VGLL 417
PFKLL WRP SKN+K +DG *+GLL
Sbjct: 1883 PFKLLFWRPLSKNIKCKDGG*IGLL 1809
Score = 70.3 bits (147), Expect(4) = 1e-33
Identities = 30/36 (83%), Positives = 31/36 (86%)
Frame = +3 / +1
Query: 312 GATASHAFVLESKTQGRFQASPAVIKYRVATKAALQ 419
G TASHAFVLE+K QGRFQ SPAVI YRV TKAALQ
Sbjct: 1591 GVTASHAFVLETKVQGRFQGSPAVITYRVPTKAALQ 1698
Score = 52.8 bits (109), Expect(4) = 1e-33
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2 / +2
Query: 206 IRNCI*CGH**RLLAQGSI*TCLWRGLKDFGKA* 307
++NC+*C H** LA+G I* CLWR +KD GKA*
Sbjct: 1400 LQNCL*CEH***YLAKGGI*ACLWRDVKDIGKA* 1501
Score = 44.6 bits (91), Expect(4) = 1e-33
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +3 / +2
Query: 495 KKLVAKYGALVSVVSFVLGFIYLVASP 575
++LVAKYG+LVSVV V FIYLVASP
Sbjct: 2105 QRLVAKYGSLVSVVGLVGVFIYLVASP 2185
Score = 42.3 bits (86), Expect(4) = 1e-33
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +2 / +2
Query: 419 GGLLNSHPCP*HSC*KASSEEV*MG 493
GGL N HPC * SC*+AS +EV*MG
Sbjct: 1811 GGLFNPHPCT*CSC*EASRKEV*MG 1885
Score = 53.3 bits (110), Expect(4) = 7e-24
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = -3 / -2
Query: 314 TRFKPFQSL*DLSRDKFKCFLGPRVVINGHIICS 213
+R KPFQ L* LSRDK KC L P ++IN HII S
Sbjct: 1508 SRVKPFQCL*HLSRDKLKCLLWPSIIINAHIIGS 1407
Score = 49.2 bits (101), Expect(4) = 7e-24
Identities = 22/36 (61%), Positives = 23/36 (63%)
Frame = -2 / -3
Query: 420 PEVQPLWQHGT**QQVKLGTFPVFCSPIQTRAKQWH 313
PE QPLW+H ** QV L T PV SP Q AKQ H
Sbjct: 1699 PEAQPLWEHDR**PQVNLETCPVLWSPRQMHAKQ*H 1592
Score = 45.1 bits (92), Expect(4) = 7e-24
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = -2 / -1
Query: 492 PIQTSSLEAFQQECQGQGWELSRPP 418
PIQTS LEA QQE Q QGW L+RPP
Sbjct: 1884 PIQTSFLEASQQEHQVQGWGLNRPP 1810
Score = 28.6 bits (56), Expect(4) = 7e-24
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3 / -3
Query: 566 DQVDEAQNEGNDRHQCSVLRNK 501
+QVD+ N+ N+ HQ VLR+K
Sbjct: 2176 NQVDKHSNQANNGHQRPVLRHK 2111
Score = 48.3 bits (99), Expect(4) = 5e-19
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = +1 / +1
Query: 211 QLHMMWPLMTTLGPRKHLNLSLERSQRLWKGL 306
+L MM LM LG R+HL+LSLER QR WKGL
Sbjct: 1405 ELPMM*ALMMILGQRRHLSLSLERCQRHWKGL 1500
Score = 46.4 bits (95), Expect(4) = 5e-19
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +1 / +2
Query: 304 LNLVPLLRTRLYWRAKHREGSKLHLLSSSTVLPQRLHFR 420
L +V LLR L WR K+R G K+HL V PQRL FR
Sbjct: 1583 LLVVSLLRMHLSWRPKYRAGFKVHLRLLPIVFPQRLRFR 1699
Score = 38.6 bits (78), Expect(4) = 5e-19
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1 / +3
Query: 514 TEHWCLSFPSFWASSTWSRAHRNLLAQSLARRGADLSIYH 633
T WC STW +A +N Q ARRG D+ YH
Sbjct: 2124 TGRWCPLLAWLECLSTWLQARQNPAVQKQARRGVDILAYH 2243
Score = 25.8 bits (50), Expect(4) = 5e-19
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / +1
Query: 418 RRPTQLPSLPLTFLLK 465
RRP Q PSL L FLL+
Sbjct: 1810 RRPIQPPSLHLMFLLR 1857
Score = 46.0 bits (94), Expect(3) = 3e-17
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = -3 / -1
Query: 419 LKCSLCGNTVLDDSR*SLEPSLCFALQYKRVRSSGT 312
LK SLCGNT+ ++ R*+L+P+L F LQ K +RSS T
Sbjct: 1698 LKRSLCGNTIGNNRR*TLKPALYFGLQDKCMRSSDT 1591
Score = 44.6 bits (91), Expect(3) = 3e-17
Identities = 20/31 (64%), Positives = 20/31 (64%)
Frame = -2 / -1
Query: 306 QAFPKSLRPLQRQVQMLPWAKSRH*WPHHMQ 214
QAFP SL LQRQ QM P AK H* HH Q
Sbjct: 1500 QAFPMSLTSLQRQAQMPPLAKYHH*CSHHRQ 1408
Score = 43.2 bits (88), Expect(3) = 3e-17
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -1 / -3
Query: 496 LAHSNFFTGGLSARMSRAGMGVE 428
L HSNFF+GGLSAR S A MGVE
Sbjct: 1888 LTHSNFFSGGLSARTSSARMGVE 1820
>LOC_Os05g01262:12005.t04696:unspliced-genomic translocon-associated protein beta containing protein, expressed|
Length = 2426
Score = 67.0 bits (140), Expect(5) = 6e-45
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +3 / +2
Query: 114 PFLVAHKKVALSRPKPGVERLAVSLDLYNQGSAT 215
PF+VA KKVALSRP PGVERLAV+L+LYNQGSA+
Sbjct: 173 PFVVAQKKVALSRPGPGVERLAVTLNLYNQGSAS 274
Score = 67.0 bits (140), Expect(5) = 6e-45
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +3 / +3
Query: 312 GATASHAFVLESKTQGRFQASPAVIKYRVATKAALQ 419
GATASH F+LE+K QG+FQ SPA+I YRV TKAALQ
Sbjct: 1272 GATASHNFILETKVQGKFQGSPAIITYRVPTKAALQ 1379
Score = 47.3 bits (97), Expect(5) = 6e-45
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +3 / +3
Query: 414 LQEAYSTPIPALDILAERPPVKKFEWAKKLV 506
L+EAYSTP+ LDILAERPP +KFE L+
Sbjct: 1722 LKEAYSTPMFPLDILAERPPQQKFELVSYLI 1814
Score = 47.3 bits (97), Expect(5) = 6e-45
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +3 / +1
Query: 495 KKLVAKYGALVSVVSFVLGFIYLVASP 575
++LV KYG+LVSVVSFV FIYLVASP
Sbjct: 2059 QRLVGKYGSLVSVVSFVGVFIYLVASP 2139
Score = 38.6 bits (78), Expect(5) = 6e-45
Identities = 18/29 (62%), Positives = 19/29 (65%)
Frame = +1 / +2
Query: 220 MMWPLMTTLGPRKHLNLSLERSQRLWKGL 306
MM TTLG R+ NLSLE QRLWK L
Sbjct: 1094 MMLA*TTTLGHRRLFNLSLEPHQRLWKNL 1180
Score = 59.3 bits (123), Expect(5) = 4e-35
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = -1 / -3
Query: 211 ADPWL*RSRETARRSTPGLGRERATFLCATRKG 113
A+PWL*R R TARRSTPG GR+ ATF CAT G
Sbjct: 270 AEPWL*RLRVTARRSTPGPGRDSATFFCATTNG 172
Score = 57.9 bits (120), Expect(5) = 4e-35
Identities = 26/38 (68%), Positives = 28/38 (73%)
Frame = -1 / -1
Query: 613 RLFLPDFEPEDFDGLATR*MKPRTKETTDTSAPYFATS 500
RLFL F DFDGLATR*+ TKETT+TS PYF TS
Sbjct: 2177 RLFLLPFAAVDFDGLATR*INTPTKETTETSDPYFPTS 2064
Score = 45.5 bits (93), Expect(5) = 4e-35
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -1 / -2
Query: 406 FVATRYLMTAGEAWNLPCVLLSNTNACEAVAP 311
FV TRY++ AGE NLPC L+S EAVAP
Sbjct: 1366 FVGTRYVIMAGEP*NLPCTLVSKMKLWEAVAP 1271
Score = 36.3 bits (73), Expect(5) = 4e-35
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = -2 / -3
Query: 498 S*PIQTSSLEAFQQECQGQGWELSRPP 418
+*PIQTS E QQE Q + W LS+PP
Sbjct: 1806 N*PIQTSVGEVSQQEYQVETWALSKPP 1726
Score = 34.5 bits (69), Expect(5) = 4e-35
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = -3 / -3
Query: 311 RFKPFQSL*DLSRDKFKCFLGPRVVINGHII 219
R K F +L* SRDK K L PRVV+ +II
Sbjct: 1185 RIKFFHNL*CGSRDKLKSLLWPRVVVQANII 1093
Score = 65.2 bits (136), Expect(4) = 3e-29
Identities = 27/55 (49%), Positives = 39/55 (70%)
Frame = +3 / +1
Query: 174 LAVSLDLYNQGSATAYDVAINDDSWPKEAFELVSGEVSKTLERLEPGATASHAFV 338
L +SL L TAYDV++NDDSWP+EAF+L+SG SK +E+L+P T +++
Sbjct: 1048 LLLSLSLSLIFYRTAYDVSLNDDSWPQEAFQLISGTTSKIVEKLDPLVTTLTSYL 1212
Score = 57.4 bits (119), Expect(4) = 3e-29
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = +2 / +2
Query: 311 WCHCFARVCIGEQNTGKVPSFTCCHQVPCCHKGCTSG 421
WC+CF ++ +G+Q+ G+V +C + +PC HKG TSG
Sbjct: 1271 WCYCFPQLHLGDQSAGQVSGLSCHYHIPCSHKGRTSG 1381
Score = 36.8 bits (74), Expect(4) = 3e-29
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +2 / +3
Query: 497 ETCCEVRSTGVCRFLRSGLHLPGREPIEIFWLKVWQEEAL 616
ETC E+ G+ FL ++LPG +P++I K QEEAL
Sbjct: 2061 ETCGEIWVAGLRCFLCRCVYLPGCKPVKIHCCKRKQEEAL 2180
Score = 35.0 bits (70), Expect(4) = 3e-29
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2 / +2
Query: 413 TSGGLLNSHPCP*HSC*KASSEEV*MG* 496
+ GGLLN+H *+SC*+ S EV*+G*
Sbjct: 1721 SQGGLLNAHVST*YSC*ETSPTEV*IG* 1804
Score = 43.7 bits (89), Expect(3) = 8e-14
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = -3 / -1
Query: 419 LKCSLCGNTVLDDSR*SLEPSLCFALQYKRVRSSGT 312
LKC LCGNTV D+ R +L+ +L F LQ + V SS T
Sbjct: 1379 LKCGLCGNTVCDNGRRALKLALHFGLQDEVVGSSST 1272
Score = 43.2 bits (88), Expect(3) = 8e-14
Identities = 23/50 (46%), Positives = 29/50 (58%)
Frame = -1 / -1
Query: 319 VAPGSSLSKVFETSPETSSNASLGQESSLMATSYAVADPWL*RSRETARR 170
V GSS S +F+ PE S AS GQESS TS AV R RE++++
Sbjct: 1193 VTNGSSFSTIFDVVPEIS*KASCGQESSFKLTS*AVL*KMRERERESSKQ 1044
Score = 35.0 bits (70), Expect(3) = 8e-14
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -1 / -2
Query: 496 LAHSNFFTGGLSARMSRAGMGVE 428
L +SNF GGLSAR+S MGVE
Sbjct: 1804 LTNSNFCWGGLSARISSGNMGVE 1736
Score = 36.8 bits (74), Expect(3) = 3e-07
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +1 / +1
Query: 304 LNLVPLLRTRLYWRAKHREGSKLHLLSSSTVLPQRLHFR 420
L++V LL T WR K R + L S TV PQR HFR
Sbjct: 1264 LSVVLLLPTTSSWRPKCRASFRALLPLSHTVFPQRPHFR 1380
Score = 32.7 bits (65), Expect(3) = 3e-07
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +1 / +2
Query: 523 WCLSFPSFWASSTWSRAHRNLLAQSLARRGA 615
W FP STW +A +N L Q ARRGA
Sbjct: 2087 WSPLFPLSVCLSTWLQARQNPLLQKEARRGA 2179
Score = 29.5 bits (58), Expect(3) = 3e-07
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2 / +3
Query: 239 RLLAQGSI*TCLWRGLKDFGKA*T 310
RLLA G T LW +KD GK *+
Sbjct: 1113 RLLATGGFSTYLWNHIKDCGKT*S 1184
Score = 37.7 bits (76), Expect(3) = 1e-06
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = -2 / -3
Query: 420 PEVQPLWQHGT**QQVKLGTFPVFCSPIQTRAKQWH 313
PEV+PLW+HG ** Q T P SP + KQ H
Sbjct: 1380 PEVRPLWEHGM**WQESPETCPALWSPR*SCGKQ*H 1273
Score = 29.9 bits (59), Expect(3) = 1e-06
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3 / -1
Query: 488 FKLLHWRPFSKNVKGRDGS*VGLLK 414
FKLL R SKN+K + G *V LL+
Sbjct: 1796 FKLLLGRSLSKNIKWKHGR*VSLLE 1722
Score = 29.0 bits (57), Expect(3) = 1e-06
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -2
Query: 306 QAFPKSLRPLQRQVQMLPWAKSRH*WPHH 220
Q FP+SL QR V+ P AKSR HH
Sbjct: 1180 QVFPQSLMWFQR*VEKPPVAKSRRSS*HH 1094
>LOC_Os04g31610:12004.t02842:unspliced-genomic MYND finger family protein, expressed|
Length = 1702
Score = 25.4 bits (49), Expect(3) = 4.3
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +2 / +1
Query: 368 SFTCCHQVPCCHKGCTSGGLLNSHPCP 448
S T C C C++G +S P P
Sbjct: 862 SGTACRTATACAAPCSTGAASSSRPTP 942
Score = 24.0 bits (46), Expect(3) = 4.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3 / +1
Query: 873 VVVHPILAPGITSLLLQMKP*NGKS 947
+ V +PG +S LL M P*N ++
Sbjct: 1594 ITVRSFFSPGWSSTLLYMGP*NERT 1668
Score = 22.6 bits (43), Expect(3) = 4.3
Identities = 5/10 (50%), Positives = 7/10 (70%)
Frame = +2 / +2
Query: 308 TWCHCFARVC 337
+WC C R+C
Sbjct: 590 SWCSCLRRLC 619
>LOC_Os07g10540:12007.t00928:unspliced-genomic aminopeptidase/ metalloexopeptidase, putative, expressed|
Length = 8005
Score = 26.3 bits (51), Expect(3) = 7.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3 / -3
Query: 314 TRFKPFQSL*DLSRDKFKCFLGPRVVINGHIICSCG 207
T PF + DL++D F P +I ++CS G
Sbjct: 1970 TALHPFSASCDLTKDNFDGTSTPAYLIPCTLVCSFG 1863
Score = 25.4 bits (49), Expect(3) = 7.6
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1 / -3
Query: 730 RFMGCCNLRDFFHRLSRVSLHANGQLQ 650
R GC F R SR LH++G Q
Sbjct: 3710 RLYGCLRYGSFNSRKSRFCLHSSGIFQ 3630
Score = 23.5 bits (45), Expect(3) = 7.6
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -3 / -3
Query: 566 DQVDEAQNEGNDRHQCSVLRN 504
D + + E +++H+C V+RN
Sbjct: 2111 DS*ESIKKEYSNKHRCQVIRN 2049
>LOC_Os09g23310:12009.t02015:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
Length = 4167
Score = 25.8 bits (50), Expect(2) = 9.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2 / -2
Query: 557 LPGREPIEIFWLKVW 601
LPG EP+E+ L+ W
Sbjct: 569 LPGSEPLELLLLRSW 525
Score = 22.6 bits (43), Expect(2) = 9.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3 / -3
Query: 645 RFCSWPFAWRETLDSR*KKSLRL 713
R C W WR TL+ R +++ L
Sbjct: 529 RGCHWLDPWRLTLERRREQTREL 461
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 383,019,012
Number of extensions: 6069814
Number of successful extensions: 23638
Number of sequences better than 10.0: 21
Length of query: 329
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 279
Effective length of database: 52,799,986
Effective search space: 14731196094
Effective search space used: 14731196094
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)