ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf84c21 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ291295.1|HVU291295 Hordeum vulgare mRNA for cold-regulated protein, clone cor tma-ap3 Length = 672 Score = 991 bits (500), Expect = 0.0 Identities = 503/504 (99%) Strand = Plus / Plus Query: 1 ggtcgctggcgctggtggtgcaggacatcgacgcggacgagcgggtgccgtggacgcact 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 ggtcgctggcgctggtggtgcaggacatcgacgcggacgagcgggtgccgtggacgcact 218 Query: 61 gggtggtggccaacatctcgcccgaggagaaggggctgcccgaggggttctccggcgccg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 219 gggtggtggccaacatctcgcccgaggagaaggggctgcccgaggggttctccggcgccg 278 Query: 121 ggggcaacgccaacgccggcggcgaaggcggcctccaggagggggtcaacgactggaagc 180 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 279 ggggcaacgccaacgccggcggggaaggcggcctccaggagggggtcaacgactggaagc 338 Query: 181 agcccgggtggcgcggccccgtcccggactcccacggccaccgcatccagttccggctct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 agcccgggtggcgcggccccgtcccggactcccacggccaccgcatccagttccggctct 398 Query: 241 acgcgctcgacgacgtgctcagcctcggcaacaaggtgaccgtggataaggtcatggagg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 acgcgctcgacgacgtgctcagcctcggcaacaaggtgaccgtggataaggtcatggagg 458 Query: 301 ccatcgaggggcacgtgctcggggaggcagagctcacggccgtcttctaaggagttagga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ccatcgaggggcacgtgctcggggaggcagagctcacggccgtcttctaaggagttagga 518 Query: 361 gtttcgtggattttgtctgacaccacctgcttgctacttcttctttaccaatttgtgtgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 gtttcgtggattttgtctgacaccacctgcttgctacttcttctttaccaatttgtgtgt 578 Query: 421 ggtctgttctgtagcgtgcctgtatacatatggcaacgaccagcctttgtaattttcatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 579 ggtctgttctgtagcgtgcctgtatacatatggcaacgaccagcctttgtaattttcatc 638 Query: 481 caataaatgaagtaacttgttatc 504 |||||||||||||||||||||||| Sbjct: 639 caataaatgaagtaacttgttatc 662
>dbj|AB097412.1| Triticum aestivum Wcor18 mRNA for cold regulated protein, complete cds Length = 784 Score = 581 bits (293), Expect = e-162 Identities = 343/359 (95%), Gaps = 3/359 (0%) Strand = Plus / Plus Query: 1 ggtcgctggcgctggtggtgcaggacatcgacgcggacgagcgggtgccgtggacgcact 60 ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 225 ggtcgctggcggtggtggtgcaggacgtcgacgcggacgagcgggtgccgtggacgcact 284 Query: 61 gggtggtggccaacatctcgcccgaggagaaggggctgcccgaggggttctccggcgccg 120 ||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 285 gggtggtcgtcaacatctcgcccgaggagaaggggctgcccgagggcttctccggcgccg 344 Query: 121 ggggcaacgccaacgccggcggcg---aaggcggcctccaggagggggtcaacgactgga 177 |||||||||||||||||||||||| | |||||| |||||||||||||||||||||||| Sbjct: 345 ggggcaacgccaacgccggcggcggcgacggcggcgtccaggagggggtcaacgactgga 404 Query: 178 agcagcccgggtggcgcggccccgtcccggactcccacggccaccgcatccagttccggc 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 agcagcccgggtggcgcggccccgtcccggactcccacggccaccgcatccagttccggc 464 Query: 238 tctacgcgctcgacgacgtgctcagcctcggcaacaaggtgaccgtggataaggtcatgg 297 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 465 tctacgcgctcgacgacgtgctcagcctcggcaacaaggtgactgtggacaaggtcatgg 524 Query: 298 aggccatcgaggggcacgtgctcggggaggcagagctcacggccgtcttctaaggagtt 356 |||||||||||||||||||||| |||||||| ||| |||||||||| |||||||||||| Sbjct: 525 aggccatcgaggggcacgtgctgggggaggccgagatcacggccgtgttctaaggagtt 583 Score = 127 bits (64), Expect = 4e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 413 ttgtgtgtggtctgttctgtagcgtgcctgtatacatatggcaacgaccagcctttgtaa 472 ||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| Sbjct: 645 ttgtgtgtggtctgttctgtagcgtgcctgtatacgcatggccacgagcagcctttgtaa 704 Query: 473 ttttcatccaataaatgaagtaacttgttatc 504 |||| |||||||||||||||| |||| ||||| Sbjct: 705 ttttgatccaataaatgaagtgacttcttatc 736
>gb|DQ245527.1| Zea mays clone 16762 mRNA sequence Length = 744 Score = 208 bits (105), Expect = 1e-50 Identities = 156/173 (90%) Strand = Plus / Plus Query: 147 ggcggcctccaggagggggtcaacgactggaagcagcccgggtggcgcggccccgtcccg 206 |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||| Sbjct: 410 ggcggcctgcaggagggggtcaacgactggaagcagcccggctggcgcgggcccgtgccg 469 Query: 207 gactcccacggccaccgcatccagttccggctctacgcgctcgacgacgtgctcagcctc 266 ||||||||||||||||||||||||| |||||||||||||||||||| | | |||| Sbjct: 470 ccctcccacggccaccgcatccagttcaagctctacgcgctcgacgacgaggtgcacctc 529 Query: 267 ggcaacaaggtgaccgtggataaggtcatggaggccatcgaggggcacgtgct 319 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||| Sbjct: 530 ggcaacaaggtgaccagggataagctcatggaggccatcgacgggcacgtgct 582 Score = 111 bits (56), Expect = 3e-21 Identities = 104/120 (86%) Strand = Plus / Plus Query: 1 ggtcgctggcgctggtggtgcaggacatcgacgcggacgagcgggtgccgtggacgcact 60 |||||||||||||| ||||||||||||||||||| ||| | |||||||||||||||| Sbjct: 255 ggtcgctggcgctgctggtgcaggacatcgacgccgaccccagcgtgccgtggacgcact 314 Query: 61 gggtggtggccaacatctcgcccgaggagaaggggctgcccgaggggttctccggcgccg 120 ||||||||||||||||| |||||| | ||| || |||||||||||||||||||||| Sbjct: 315 gggtggtggccaacatcccgcccgccaccaggggcctccccgaggggttctccggcgccg 374
>emb|CT836477.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN077D02, full insert sequence Length = 728 Score = 180 bits (91), Expect = 3e-42 Identities = 175/203 (86%) Strand = Plus / Plus Query: 147 ggcggcctccaggagggggtcaacgactggaagcagcccgggtggcgcggccccgtcccg 206 |||||| |||||||||| ||||||||||||||||||||||| |||||||||||| |||| Sbjct: 397 ggcggcatccaggagggcgtcaacgactggaagcagcccggctggcgcggccccatccct 456 Query: 207 gactcccacggccaccgcatccagttccggctctacgcgctcgacgacgtgctcagcctc 266 ||||| ||||||||||||||||||| ||||||||| |||||||||| | | |||| Sbjct: 457 ccctcccgcggccaccgcatccagttcaagctctacgccctcgacgacgaggtgcacctc 516 Query: 267 ggcaacaaggtgaccgtggataaggtcatggaggccatcgaggggcacgtgctcggggag 326 ||||||||||||||| ||| ||| | ||||| |||||||||||||| ||||| || || Sbjct: 517 ggcaacaaggtgaccaaggacaagctgatggacgccatcgaggggcatgtgctgggagaa 576 Query: 327 gcagagctcacggccgtcttcta 349 || ||||||| |||||||||||| Sbjct: 577 gccgagctcatggccgtcttcta 599 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 45 gtgccgtggacgcactgggtggtggccaacatctcgcccgaggagaaggggctgcccgag 104 |||||||||||||||||||| || ||||||||| ||||| | ||||| || |||||| Sbjct: 298 gtgccgtggacgcactgggtcgtcgccaacatcccgccctccgtcaagggcctccccgag 357 Query: 105 gggttctccggc 116 || ||||||||| Sbjct: 358 ggcttctccggc 369 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 ggtcgctggcgctggtggtgcaggacatcgacgc 34 |||||||||||||||||||||| ||| ||||||| Sbjct: 242 ggtcgctggcgctggtggtgcacgacgtcgacgc 275
>dbj|AK241478.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065165M02, full insert sequence Length = 731 Score = 172 bits (87), Expect = 8e-40 Identities = 174/203 (85%) Strand = Plus / Plus Query: 147 ggcggcctccaggagggggtcaacgactggaagcagcccgggtggcgcggccccgtcccg 206 |||||| |||||||||| ||||||||||||||||||||||| |||||||||||| |||| Sbjct: 399 ggcggcatccaggagggcgtcaacgactggaagcagcccggctggcgcggccccatccct 458 Query: 207 gactcccacggccaccgcatccagttccggctctacgcgctcgacgacgtgctcagcctc 266 ||||| ||||||||||||||||||| ||||||||| |||||||||| | | |||| Sbjct: 459 ccctcccgcggccaccgcatccagttcaagctctacgccctcgacgacgaggtgcacctc 518 Query: 267 ggcaacaaggtgaccgtggataaggtcatggaggccatcgaggggcacgtgctcggggag 326 ||||||||||||||| ||| ||| | ||||| |||||||||||||| ||||| || || Sbjct: 519 ggcaacaaggtgaccaaggacaagctgatggacgccatcgaggggcatgtgctgggagaa 578 Query: 327 gcagagctcacggccgtcttcta 349 | ||||||| |||||||||||| Sbjct: 579 cccgagctcatggccgtcttcta 601 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 45 gtgccgtggacgcactgggtggtggccaacatctcgcccgaggagaaggggctgcccgag 104 |||||||||||||||||||| || ||||||||| ||||| | ||||| || |||||| Sbjct: 300 gtgccgtggacgcactgggtcgtcgccaacatcccgccctccgtcaagggcctccccgag 359 Query: 105 gggttctccggc 116 || ||||||||| Sbjct: 360 ggcttctccggc 371 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 ggtcgctggcgctggtggtgcaggacatcgacgc 34 |||||||||||||||||||||| ||| ||||||| Sbjct: 244 ggtcgctggcgctggtggtgcacgacgtcgacgc 277
>gb|AC112159.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_C01, complete sequence Length = 114236 Score = 131 bits (66), Expect = 3e-27 Identities = 114/130 (87%) Strand = Plus / Minus Query: 147 ggcggcctccaggagggggtcaacgactggaagcagcccgggtggcgcggccccgtcccg 206 |||||| |||||||||| ||||||||||||||||||||||| |||||||||||| |||| Sbjct: 67507 ggcggcatccaggagggcgtcaacgactggaagcagcccggctggcgcggccccatccct 67448 Query: 207 gactcccacggccaccgcatccagttccggctctacgcgctcgacgacgtgctcagcctc 266 ||||| ||||||||||||||||||| ||||||||| |||||||||| | | |||| Sbjct: 67447 ccctcccgcggccaccgcatccagttcaagctctacgccctcgacgacgaggtgcacctc 67388 Query: 267 ggcaacaagg 276 |||||||||| Sbjct: 67387 ggcaacaagg 67378 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 294 atggaggccatcgaggggcacgtgctcggggaggcagagctcacggccgtcttcta 349 ||||| |||||||||||||| ||||| || || || ||||||| |||||||||||| Sbjct: 67266 atggacgccatcgaggggcatgtgctgggagaagccgagctcatggccgtcttcta 67211 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 45 gtgccgtggacgcactgggtggtggccaacatctcgcccgaggagaaggggctgcccgag 104 |||||||||||||||||||| || ||||||||| ||||| | ||||| || |||||| Sbjct: 67606 gtgccgtggacgcactgggtcgtcgccaacatcccgccctccgtcaagggcctccccgag 67547 Query: 105 gggttctccggc 116 || ||||||||| Sbjct: 67546 ggcttctccggc 67535 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 1 ggtcgctggcgctggtggtgcaggacatcgacgc 34 |||||||||||||||||||||| ||| ||||||| Sbjct: 67662 ggtcgctggcgctggtggtgcacgacgtcgacgc 67629
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 131 bits (66), Expect = 3e-27 Identities = 114/130 (87%) Strand = Plus / Minus Query: 147 ggcggcctccaggagggggtcaacgactggaagcagcccgggtggcgcggccccgtcccg 206 |||||| |||||||||| ||||||||||||||||||||||| |||||||||||| |||| Sbjct: 22868803 ggcggcatccaggagggcgtcaacgactggaagcagcccggctggcgcggccccatccct 22868744 Query: 207 gactcccacggccaccgcatccagttccggctctacgcgctcgacgacgtgctcagcctc 266 ||||| ||||||||||||||||||| ||||||||| |||||||||| | | |||| Sbjct: 22868743 ccctcccgcggccaccgcatccagttcaagctctacgccctcgacgacgaggtgcacctc 22868684 Query: 267 ggcaacaagg 276 |||||||||| Sbjct: 22868683 ggcaacaagg 22868674 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 294 atggaggccatcgaggggcacgtgctcggggaggcagagctcacggccgtcttcta 349 ||||| |||||||||||||| ||||| || || || ||||||| |||||||||||| Sbjct: 22868562 atggacgccatcgaggggcatgtgctgggagaagccgagctcatggccgtcttcta 22868507 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 45 gtgccgtggacgcactgggtggtggccaacatctcgcccgaggagaaggggctgcccgag 104 |||||||||||||||||||| || ||||||||| ||||| | ||||| || |||||| Sbjct: 22868902 gtgccgtggacgcactgggtcgtcgccaacatcccgccctccgtcaagggcctccccgag 22868843 Query: 105 gggttctccggc 116 || ||||||||| Sbjct: 22868842 ggcttctccggc 22868831 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 1 ggtcgctggcgctggtggtgcaggacatcgacgc 34 |||||||||||||||||||||| ||| ||||||| Sbjct: 22868958 ggtcgctggcgctggtggtgcacgacgtcgacgc 22868925
>ref|NM_001062337.1| Oryza sativa (japonica cultivar-group) Os05g0468800 (Os05g0468800) mRNA, complete cds Length = 486 Score = 129 bits (65), Expect = 1e-26 Identities = 98/109 (89%) Strand = Plus / Plus Query: 147 ggcggcctccaggagggggtcaacgactggaagcagcccgggtggcgcggccccgtcccg 206 |||||| |||||||||| ||||||||||||||||||||||| |||||||||||| |||| Sbjct: 301 ggcggcatccaggagggcgtcaacgactggaagcagcccggctggcgcggccccatccct 360 Query: 207 gactcccacggccaccgcatccagttccggctctacgcgctcgacgacg 255 ||||| ||||||||||||||||||| ||||||||| |||||||||| Sbjct: 361 ccctcccgcggccaccgcatccagttcaagctctacgccctcgacgacg 409 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 45 gtgccgtggacgcactgggtggtggccaacatctcgcccgaggagaaggggctgcccgag 104 |||||||||||||||||||| || ||||||||| ||||| | ||||| || |||||| Sbjct: 202 gtgccgtggacgcactgggtcgtcgccaacatcccgccctccgtcaagggcctccccgag 261 Query: 105 gggttctccggc 116 || ||||||||| Sbjct: 262 ggcttctccggc 273 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 294 atggaggccatcgaggggcacgtgctcggggaggcagagctcacggccgtcttcta 349 ||||| |||||||||||||| ||||| || || || ||||||| |||||||||||| Sbjct: 430 atggacgccatcgaggggcatgtgctgggagaagccgagctcatggccgtcttcta 485 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 ggtcgctggcgctggtggtgcaggacatcgacgc 34 |||||||||||||||||||||| ||| ||||||| Sbjct: 146 ggtcgctggcgctggtggtgcacgacgtcgacgc 179
>gb|CP000384.1| Mycobacterium sp. MCS, complete genome Length = 5705448 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 118 ccgggggcaacgccaacgccggcggcgaaggcgg 151 |||| ||||||||||||||||||||||||||||| Sbjct: 3888944 ccggtggcaacgccaacgccggcggcgaaggcgg 3888911
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 215 cggccaccgcatccagttccggctctacgcgctcgacgacgtgctcagcctcggcaacaa 274 ||||||||||||||||||| ||||||||| |||||||||| | | |||||||||||| Sbjct: 20149604 cggccaccgcatccagttcaagctctacgccctcgacgacgaggtgcacctcggcaacaa 20149663 Query: 275 gg 276 || Sbjct: 20149664 gg 20149665 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 294 atggaggccatcgaggggcacgtgctcggggaggcagagctcacggccgtcttctaag 351 ||||| |||||||||||||| ||||| || || || |||||| |||||||||||||| Sbjct: 15807979 atggacgccatcgaggggcatgtgctgggagaagccaagctcatggccgtcttctaag 15807922 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 215 cggccaccgcatccagttccggctctacgcgctcgacgacgtgctcagcctcggcaacaa 274 ||||||||||||||||||| |||||||| |||||||||| | | |||||||||||| Sbjct: 15808141 cggccaccgcatccagttcaagctctacgtcctcgacgacgaggtgcacctcggcaacaa 15808082 Query: 275 gg 276 || Sbjct: 15808081 gg 15808080 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 294 atggaggccatcgaggggcacgtgctcggggaggcagagctcacggccgtcttctaag 351 ||||| |||||||||||||| ||||| || || || |||||| |||||||||||||| Sbjct: 20149768 atggacgccatcgaggggcatgtgctgggagaagcccagctcatggccgtcttctaag 20149825
>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0047P18 Length = 169128 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 215 cggccaccgcatccagttccggctctacgcgctcgacgacgtgctcagcctcggcaacaa 274 ||||||||||||||||||| ||||||||| |||||||||| | | |||||||||||| Sbjct: 43104 cggccaccgcatccagttcaagctctacgccctcgacgacgaggtgcacctcggcaacaa 43163 Query: 275 gg 276 || Sbjct: 43164 gg 43165 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 294 atggaggccatcgaggggcacgtgctcggggaggcagagctcacggccgtcttctaag 351 ||||| |||||||||||||| ||||| || || || |||||| |||||||||||||| Sbjct: 43268 atggacgccatcgaggggcatgtgctgggagaagcccagctcatggccgtcttctaag 43325
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 284 ggataaggtcatggaggccatcgaggggcacgtgctcggggaggcagagctcacggccgt 343 ||||||| | ||||| |||||||||||||| ||||| || || || |||||| |||||| Sbjct: 29108132 ggataagctgatggacgccatcgaggggcatgtgctgggagaagccaagctcatggccgt 29108073 Query: 344 cttctaag 351 |||||||| Sbjct: 29108072 cttctaag 29108065 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 215 cggccaccgcatccagttccggctctacgcgctcgacgacgtgctcagcctcggcaacaa 274 ||||||||||||||||||| |||||||| |||||||||| | | |||||||||||| Sbjct: 29108284 cggccaccgcatccagttcaagctctacgtcctcgacgacgaggtgcacctcggcaacaa 29108225 Query: 275 gg 276 || Sbjct: 29108224 gg 29108223
>dbj|AP003813.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1150_E04 Length = 130973 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 284 ggataaggtcatggaggccatcgaggggcacgtgctcggggaggcagagctcacggccgt 343 ||||||| | ||||| |||||||||||||| ||||| || || || |||||| |||||| Sbjct: 43250 ggataagctgatggacgccatcgaggggcatgtgctgggagaagccaagctcatggccgt 43191 Query: 344 cttctaag 351 |||||||| Sbjct: 43190 cttctaag 43183 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 215 cggccaccgcatccagttccggctctacgcgctcgacgacgtgctcagcctcggcaacaa 274 ||||||||||||||||||| |||||||| |||||||||| | | |||||||||||| Sbjct: 43402 cggccaccgcatccagttcaagctctacgtcctcgacgacgaggtgcacctcggcaacaa 43343 Query: 275 gg 276 || Sbjct: 43342 gg 43341
>dbj|AP003818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1200_C08 Length = 106214 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 284 ggataaggtcatggaggccatcgaggggcacgtgctcggggaggcagagctcacggccgt 343 ||||||| | ||||| |||||||||||||| ||||| || || || |||||| |||||| Sbjct: 56089 ggataagctgatggacgccatcgaggggcatgtgctgggagaagccaagctcatggccgt 56030 Query: 344 cttctaag 351 |||||||| Sbjct: 56029 cttctaag 56022 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 215 cggccaccgcatccagttccggctctacgcgctcgacgacgtgctcagcctcggcaacaa 274 ||||||||||||||||||| |||||||| |||||||||| | | |||||||||||| Sbjct: 56241 cggccaccgcatccagttcaagctctacgtcctcgacgacgaggtgcacctcggcaacaa 56182 Query: 275 gg 276 || Sbjct: 56181 gg 56180
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 294 atggaggccatcgaggggcacgtgctcggggaggcagagctcacggccgtcttc 347 ||||| |||||||||||||| ||||| || || || ||||||| |||||||||| Sbjct: 11607243 atggacgccatcgaggggcatgtgctgggagaagccgagctcatggccgtcttc 11607190
>dbj|AP007204.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0008D05 Length = 134776 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 294 atggaggccatcgaggggcacgtgctcggggaggcagagctcacggccgtcttc 347 ||||| |||||||||||||| ||||| || || || ||||||| |||||||||| Sbjct: 114250 atggacgccatcgaggggcatgtgctgggagaagccgagctcatggccgtcttc 114197
>dbj|AP003934.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551A11 Length = 132384 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 294 atggaggccatcgaggggcacgtgctcggggaggcagagctcacggccgtcttc 347 ||||| |||||||||||||| ||||| || || || ||||||| |||||||||| Sbjct: 46367 atggacgccatcgaggggcatgtgctgggagaagccgagctcatggccgtcttc 46314
>dbj|AP004253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1116_C07 Length = 108208 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 294 atggaggccatcgaggggcacgtgctcggggaggcagagctcacggccgtcttc 347 ||||| |||||||||||||| ||||| || || || ||||||| |||||||||| Sbjct: 61039 atggacgccatcgaggggcatgtgctgggagaagccgagctcatggccgtcttc 60986
>dbj|AP005747.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0039E17 Length = 144126 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 294 atggaggccatcgaggggcacgtgctcggggaggcagagctcacggccgtcttctaag 351 ||||| |||||||||||||| ||||| || || || |||||| |||||||||||||| Sbjct: 93165 atggacgccatcgaggggcatgtgctgggagaagccaagctcatggccgtcttctaag 93108 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 215 cggccaccgcatccagttccggctctacgcgctcgacgacgtgctcagcctcggcaacaa 274 ||||||||||||||||||| |||||||| |||||||||| | | |||||||||||| Sbjct: 93327 cggccaccgcatccagttcaagctctacgtcctcgacgacgaggtgcacctcggcaacaa 93268 Query: 275 gg 276 || Sbjct: 93267 gg 93266
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 acgccggcggcgaaggcggcct 154 |||||||||||||||||||||| Sbjct: 5736983 acgccggcggcgaaggcggcct 5736962 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ggtcgctggcgctggtggtgc 21 ||||||||||||||||||||| Sbjct: 4033348 ggtcgctggcgctggtggtgc 4033328
>dbj|AB106872.1| Mus musculus Trio-V1 mRNA for Trio splicing variant, complete cds Length = 6364 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 5 gctggcgctggtggtgcaggac 26 |||||||||||||||||||||| Sbjct: 1474 gctggcgctggtggtgcaggac 1453
>gb|AC187968.4| Canis Familiaris, clone XX-151D9, complete sequence Length = 223039 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 394 ctacttcttctttaccaatttg 415 |||||||||||||||||||||| Sbjct: 14231 ctacttcttctttaccaatttg 14252 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 46522 acttcttctttaccaatttg 46503
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 acgccggcggcgaaggcggcct 154 |||||||||||||||||||||| Sbjct: 5466319 acgccggcggcgaaggcggcct 5466298
>ref|XM_001058824.1| PREDICTED: Rattus norvegicus triple functional domain (PTPRF interacting) (Trio), mRNA Length = 11116 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 5 gctggcgctggtggtgcaggac 26 |||||||||||||||||||||| Sbjct: 1651 gctggcgctggtggtgcaggac 1630
>ref|XM_226888.4| PREDICTED: Rattus norvegicus triple functional domain (PTPRF interacting) (Trio), mRNA Length = 11116 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 5 gctggcgctggtggtgcaggac 26 |||||||||||||||||||||| Sbjct: 1651 gctggcgctggtggtgcaggac 1630
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1 ggtcgctggcgctggtggtgcaggac 26 |||||||||||||||||| ||||||| Sbjct: 1254036 ggtcgctggcgctggtggcgcaggac 1254061
>ref|XM_908972.2| PREDICTED: Mus musculus triple functional domain (PTPRF interacting), transcript variant 5 (Trio), mRNA Length = 11326 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 5 gctggcgctggtggtgcaggac 26 |||||||||||||||||||||| Sbjct: 1834 gctggcgctggtggtgcaggac 1813
>ref|XM_888341.2| PREDICTED: Mus musculus triple functional domain (PTPRF interacting), transcript variant 1 (Trio), mRNA Length = 11495 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 5 gctggcgctggtggtgcaggac 26 |||||||||||||||||||||| Sbjct: 2003 gctggcgctggtggtgcaggac 1982
>gb|AC116808.10| Mus musculus chromosome 15, clone RP24-351J19, complete sequence Length = 164398 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 5 gctggcgctggtggtgcaggac 26 |||||||||||||||||||||| Sbjct: 118096 gctggcgctggtggtgcaggac 118075
>gb|AC130219.3| Mus musculus BAC clone RP23-126O16 from chromosome 15, complete sequence Length = 224179 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 5 gctggcgctggtggtgcaggac 26 |||||||||||||||||||||| Sbjct: 31172 gctggcgctggtggtgcaggac 31151
>gb|AC011846.16| Homo sapiens chromosome 15, clone RP11-346A8, complete sequence Length = 147760 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 404 tttaccaatttgtgtgtggtct 425 |||||||||||||||||||||| Sbjct: 3152 tttaccaatttgtgtgtggtct 3131
>gb|AC105129.4| Homo sapiens chromosome 15, clone RP11-349G13, complete sequence Length = 198295 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 404 tttaccaatttgtgtgtggtct 425 |||||||||||||||||||||| Sbjct: 71729 tttaccaatttgtgtgtggtct 71750
>emb|AL805978.10| Mouse DNA sequence from clone RP23-344I3 on chromosome X, complete sequence Length = 190744 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 395 tacttcttctttaccaatttgt 416 |||||||||||||||||||||| Sbjct: 13836 tacttcttctttaccaatttgt 13857
>emb|AL713991.13| Mouse DNA sequence from clone RP23-132C16 on chromosome 1, complete sequence Length = 210040 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 398 ttcttctttaccaatttgtgtg 419 |||||||||||||||||||||| Sbjct: 61355 ttcttctttaccaatttgtgtg 61334
>ref|XM_001173837.1| PREDICTED: Pan troglodytes lupus brain antigen 1 (LOC460260), mRNA Length = 8964 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 gctggtggtgcaggacatcga 31 ||||||||||||||||||||| Sbjct: 8613 gctggtggtgcaggacatcga 8633
>ref|XM_940627.2| PREDICTED: Homo sapiens lupus brain antigen 1 (LBA1), mRNA Length = 10815 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 gctggtggtgcaggacatcga 31 ||||||||||||||||||||| Sbjct: 9006 gctggtggtgcaggacatcga 9026
>ref|XM_047357.6| PREDICTED: Homo sapiens lupus brain antigen 1 (LBA1), mRNA Length = 10815 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 gctggtggtgcaggacatcga 31 ||||||||||||||||||||| Sbjct: 9006 gctggtggtgcaggacatcga 9026
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 8 ggcgctggtggtgcaggacatcgac 32 ||||||||||||| ||||||||||| Sbjct: 935510 ggcgctggtggtggaggacatcgac 935486
>gb|DQ249341.1| Streptomyces hygroscopicus subsp. duamyceticus strain JCM4427 geldanamycin biosynthesis gene cluster, partial sequence Length = 75920 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 19 tgcaggacatcgacgcggacgagcg 43 |||||||||||||||||| |||||| Sbjct: 26315 tgcaggacatcgacgcggtcgagcg 26291 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 19 tgcaggacatcgacgcggacgagcg 43 |||||||||||||||||| |||||| Sbjct: 42809 tgcaggacatcgacgcggtcgagcg 42785
>gb|AC119952.12| Mus musculus chromosome 14, clone RP24-448F1, complete sequence Length = 181695 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 396 acttcttctttaccaatttgt 416 ||||||||||||||||||||| Sbjct: 149277 acttcttctttaccaatttgt 149297
>gb|AE009202.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 228 of 256 of the complete sequence Length = 10941 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 agttccggctctacgcgctcgacga 253 ||||||||||| ||||||||||||| Sbjct: 1606 agttccggctccacgcgctcgacga 1582
>gb|AF354167.1| Uncultured delta proteobacterium isolate Eel-36e1D6 16S ribosomal RNA gene, partial sequence Length = 1454 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 ccggcggcgaaggcggcctcc 156 ||||||||||||||||||||| Sbjct: 659 ccggcggcgaaggcggcctcc 679
>gb|AF424403.1| Uncultured Nitrospira group bacterium MERTZ_2CM_68 16S ribosomal RNA gene, partial sequence Length = 997 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 ccggcggcgaaggcggcctcc 156 ||||||||||||||||||||| Sbjct: 201 ccggcggcgaaggcggcctcc 221
>gb|AF424315.1| Uncultured bacterium MERTZ_0CM_292 16S ribosomal RNA gene, partial sequence Length = 1001 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 ccggcggcgaaggcggcctcc 156 ||||||||||||||||||||| Sbjct: 201 ccggcggcgaaggcggcctcc 221
>gb|AC107531.8| Rattus norvegicus 1 BAC CH230-158N3 (Children's Hospital Oakland Research Institute) complete sequence Length = 173190 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 acttcttctttaccaatttgt 416 ||||||||||||||||||||| Sbjct: 103232 acttcttctttaccaatttgt 103212
>gb|AF507897.3| Uncultured Verrucomicrobia bacterium clone ML623J-33 16S ribosomal RNA gene, partial sequence Length = 514 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 aacgccggcggcgaaggcggc 152 ||||||||||||||||||||| Sbjct: 230 aacgccggcggcgaaggcggc 250
>gb|AC131116.3| Mus musculus BAC clone RP24-344M21 from chromosome 7, complete sequence Length = 190325 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 acttcttctttaccaatttgt 416 ||||||||||||||||||||| Sbjct: 109868 acttcttctttaccaatttgt 109848
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 agttccggctctacgcgctcgacga 253 ||||||||||| ||||||||||||| Sbjct: 2528406 agttccggctccacgcgctcgacga 2528382
>gb|AC163356.2| Mus musculus BAC clone RP23-13A21 from chromosome 6, complete sequence Length = 212612 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 ttcttctttaccaatttgtgt 418 ||||||||||||||||||||| Sbjct: 94696 ttcttctttaccaatttgtgt 94716
>gb|AC105162.11| Mus musculus chromosome 1, clone RP24-92O11, complete sequence Length = 177420 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 396 acttcttctttaccaatttgt 416 ||||||||||||||||||||| Sbjct: 87974 acttcttctttaccaatttgt 87994 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 462 agcctttgtaattttcatccaata 485 |||||||||||||||| ||||||| Sbjct: 65786 agcctttgtaattttcttccaata 65809
>emb|CT027571.7| Mouse DNA sequence from clone RP24-354E11 on chromosome 16, complete sequence Length = 200541 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 tacttcttctttaccaatttg 415 ||||||||||||||||||||| Sbjct: 103623 tacttcttctttaccaatttg 103643
>gb|AC105749.2| Homo sapiens chromosome 3 clone RP11-640L9, complete sequence Length = 200450 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 gctggtggtgcaggacatcga 31 ||||||||||||||||||||| Sbjct: 195116 gctggtggtgcaggacatcga 195096
>gb|AC097360.2| Homo sapiens chromosome 3 clone RP11-344C13, complete sequence Length = 166349 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 gctggtggtgcaggacatcga 31 ||||||||||||||||||||| Sbjct: 137586 gctggtggtgcaggacatcga 137566
>emb|AL672296.5| Human DNA sequence from clone XX-60 on chromosome 1 Contains a novel pseudogene, complete sequence Length = 40673 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 tacttcttctttaccaatttg 415 ||||||||||||||||||||| Sbjct: 36498 tacttcttctttaccaatttg 36518
>gb|AC162376.2| Mus musculus BAC clone RP24-490H13 from chromosome 12, complete sequence Length = 147631 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 398 ttcttctttaccaatttgtgt 418 ||||||||||||||||||||| Sbjct: 139035 ttcttctttaccaatttgtgt 139015
>gb|AC154181.2| Mus musculus BAC clone RP24-471B11 from chromosome 16, complete sequence Length = 147226 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 tacttcttctttaccaatttg 415 ||||||||||||||||||||| Sbjct: 57505 tacttcttctttaccaatttg 57485
>gb|AC102038.9| Mus musculus chromosome 19, clone RP23-248G20, complete sequence Length = 159945 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 acttcttctttaccaatttgt 416 ||||||||||||||||||||| Sbjct: 53925 acttcttctttaccaatttgt 53905
>emb|AL807244.7| Zebrafish DNA sequence from clone CH211-215I13 in linkage group 19 Contains a novel gene similar to Spir-2, the first exon of a novel gene simialr to BAALC (brain and acute leukemia, cytoplasmic), the atp6v1c1l gene for ATPase, H+ transporting, lysosomal, V1 subunit C, isoform 1 like protein, the oazin gene for ornithine decarboxylase antizyme inhibitor, a novel gene similar to rrm2 (ribonucleotide reductase protein r2 class I), a novel gene remotely similar to LYRIC, a novel gene similar to LAPTM4B (lysosomal associated protein transmembrane 4 beta) and a CpG island, complete sequence Length = 201745 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 481 caataaatgaagtaacttgtt 501 ||||||||||||||||||||| Sbjct: 121056 caataaatgaagtaacttgtt 121036
>gb|AF177860.1|AF177860 Agrobacterium tumefaciens NodT homolog, elongation factor P (chvH), and lysyl-tRNA synthetase homolog genes, complete cds Length = 4388 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 agttccggctctacgcgctcgacga 253 ||||||||||| ||||||||||||| Sbjct: 3861 agttccggctccacgcgctcgacga 3837
>gb|AF133300.2|AF133300 Mus musculus MOR 3'Beta1, MOR 3'Beta2, MOR 3'Beta3, and MOR 3'Beta4 genes, complete cds; Cbx3 pseudogene, complete sequence; and MOR 3'Beta5 and MOR 3'Beta6 genes, complete cds Length = 92000 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 396 acttcttctttaccaatttgt 416 ||||||||||||||||||||| Sbjct: 14825 acttcttctttaccaatttgt 14845
>gb|AY179507.1| Streptomyces hygroscopicus strain NRRL 3602 geldanamycin biosynthesis gene cluster, partial sequence Length = 69644 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 19 tgcaggacatcgacgcggacgagcg 43 |||||||||||||||||| |||||| Sbjct: 18534 tgcaggacatcgacgcggtcgagcg 18510
>emb|BX284622.3| Zebrafish DNA sequence from clone DKEY-174P10 in linkage group 19, complete sequence Length = 126451 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 481 caataaatgaagtaacttgtt 501 ||||||||||||||||||||| Sbjct: 96912 caataaatgaagtaacttgtt 96932
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 233 ccggctctacgcgctcgacgacgtg 257 ||||||| ||||||||||||||||| Sbjct: 1435426 ccggctcgacgcgctcgacgacgtg 1435402
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 134 cgccggcggcgaaggcggcctccag 158 |||||||||||| |||||||||||| Sbjct: 1191473 cgccggcggcgacggcggcctccag 1191449
>gb|AC159642.2| Mus musculus BAC clone RP23-415N22 from chromosome 12, complete sequence Length = 197100 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 398 ttcttctttaccaatttgtgt 418 ||||||||||||||||||||| Sbjct: 202 ttcttctttaccaatttgtgt 182
>emb|AL929417.11| Mouse DNA sequence from clone RP23-25M5 on chromosome 2, complete sequence Length = 215389 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 acttcttctttaccaatttgt 416 ||||||||||||||||||||| Sbjct: 1865 acttcttctttaccaatttgt 1845
>emb|BX284685.8| Mouse DNA sequence from clone RP23-114J1 on chromosome 2, complete sequence Length = 69833 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 acttcttctttaccaatttgt 416 ||||||||||||||||||||| Sbjct: 69698 acttcttctttaccaatttgt 69678
>gb|AC148326.2| Mus musculus BAC clone RP24-377D18 from 6, complete sequence Length = 177503 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 398 ttcttctttaccaatttgtgt 418 ||||||||||||||||||||| Sbjct: 176283 ttcttctttaccaatttgtgt 176263
>emb|AL844893.9| Mouse DNA sequence from clone RP23-355H24 on chromosome 2, complete sequence Length = 175570 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 398 ttcttctttaccaatttgtgt 418 ||||||||||||||||||||| Sbjct: 147680 ttcttctttaccaatttgtgt 147660
>emb|AL672091.4| Mouse DNA sequence from clone RP23-185L10 on chromosome X, complete sequence Length = 206291 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 ttcttctttaccaatttgtgt 418 ||||||||||||||||||||| Sbjct: 17507 ttcttctttaccaatttgtgt 17527
>dbj|AB002340.3| Homo sapiens mRNA for KIAA0342 protein, partial cds Length = 8859 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 gctggtggtgcaggacatcga 31 ||||||||||||||||||||| Sbjct: 7053 gctggtggtgcaggacatcga 7073
>emb|AL732545.10| Mouse DNA sequence from clone RP23-258D11 on chromosome 4, complete sequence Length = 116754 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 398 ttcttctttaccaatttgtgt 418 ||||||||||||||||||||| Sbjct: 78185 ttcttctttaccaatttgtgt 78165
>gb|CP000478.1| Syntrophobacter fumaroxidans MPOB, complete genome Length = 4990251 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 98 gcccgaggggttctccggcgccgggggc 125 |||||| ||||| ||||||||||||||| Sbjct: 333820 gcccgatgggttatccggcgccgggggc 333847
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tccggctctacgcgctcgac 251 |||||||||||||||||||| Sbjct: 740941 tccggctctacgcgctcgac 740922
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 ccagttccggctctacgcgc 246 |||||||||||||||||||| Sbjct: 2431298 ccagttccggctctacgcgc 2431317
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 236 gctctacgcgctcgacgacgtgctcagc 263 |||| |||||||||||| |||||||||| Sbjct: 122460 gctcgacgcgctcgacggcgtgctcagc 122487
>gb|AC116461.13| Mus musculus chromosome 10, clone RP23-463P8, complete sequence Length = 203737 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 ccaggagggggtcaacgactggaa 178 ||||||||||| |||||||||||| Sbjct: 84229 ccaggaggggggcaacgactggaa 84206
>gb|AE009422.1| Agrobacterium tumefaciens str. C58 Ti plasmid, section 5 of 21 of the complete sequence Length = 11903 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 cgccggcggcgaaggcggcc 153 |||||||||||||||||||| Sbjct: 5031 cgccggcggcgaaggcggcc 5050
>gb|AE007930.1| Agrobacterium tumefaciens str. C58 plasmid Ti, section 8 of 20 of the complete sequence Length = 11864 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 cgccggcggcgaaggcggcc 153 |||||||||||||||||||| Sbjct: 5001 cgccggcggcgaaggcggcc 5020
>gb|AC164080.7| Mus musculus chromosome 1, clone RP23-212E14, complete sequence Length = 205823 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 462 agcctttgtaattttcatccaata 485 |||||||||||||||| ||||||| Sbjct: 11496 agcctttgtaattttcttccaata 11473
>gb|AC123810.4| Mus musculus BAC clone RP24-178B17 from chromosome 8, complete sequence Length = 161521 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 145929 acttcttctttaccaatttg 145910
>gb|AC092350.4| Homo sapiens chromosome 16 clone RP11-29G3, complete sequence Length = 174387 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 60669 acttcttctttaccaatttg 60650
>gb|AC123073.4| Mus musculus BAC clone RP23-111E4 from 6, complete sequence Length = 191693 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 398 ttcttctttaccaatttgtgtgtg 421 ||||||||||||||||||| |||| Sbjct: 38115 ttcttctttaccaatttgtatgtg 38092 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 398 ttcttctttaccaatttgtgtgtg 421 ||||||||||||||||||| |||| Sbjct: 108161 ttcttctttaccaatttgtatgtg 108138
>gb|AC131663.3| Mus musculus BAC clone RP23-258B18 from 6, complete sequence Length = 191685 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 398 ttcttctttaccaatttgtgtgtg 421 ||||||||||||||||||| |||| Sbjct: 158298 ttcttctttaccaatttgtatgtg 158321
>gb|AC006481.3| Homo sapiens BAC clone RP11-174K5 from 7, complete sequence Length = 150052 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 118285 acttcttctttaccaatttg 118266
>dbj|AK095450.1| Homo sapiens cDNA FLJ38131 fis, clone D6OST2000507 Length = 3509 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 2814 acttcttctttaccaatttg 2833
>dbj|AB016260.1| Agrobacterium tumefaciens plasmid pTi-SAKURA, complete sequence Length = 206479 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 cgccggcggcgaaggcggcc 153 |||||||||||||||||||| Sbjct: 10946 cgccggcggcgaaggcggcc 10965
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 caacgccggcggcgaaggcg 150 |||||||||||||||||||| Sbjct: 1639542 caacgccggcggcgaaggcg 1639523
>gb|AC069366.8| Homo sapiens chromosome 17, clone RP11-720N19, complete sequence Length = 180754 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 cagcctcggcaacaaggtga 279 |||||||||||||||||||| Sbjct: 32555 cagcctcggcaacaaggtga 32574
>gb|AC015688.11| Homo sapiens chromosome 17, clone RP11-19P22, complete sequence Length = 152351 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 cagcctcggcaacaaggtga 279 |||||||||||||||||||| Sbjct: 139780 cagcctcggcaacaaggtga 139799
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 acgccggcggcgaaggcggcctcc 156 ||||||||||||| |||||||||| Sbjct: 1773883 acgccggcggcgatggcggcctcc 1773906
>gb|AC104662.3| Homo sapiens BAC clone RP11-660M5 from 4, complete sequence Length = 122457 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 47959 acttcttctttaccaatttg 47978
>emb|AL356384.9| Human DNA sequence from clone RP11-436I5 on chromosome 13, complete sequence Length = 95896 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 91863 acttcttctttaccaatttg 91844
>gb|AC159022.2| Pan troglodytes BAC clone CH251-510P23 from chromosome unknown, complete sequence Length = 185833 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 cagcctcggcaacaaggtga 279 |||||||||||||||||||| Sbjct: 119166 cagcctcggcaacaaggtga 119185
>gb|AC093599.6| Homo sapiens BAC clone RP11-285C1 from 4, complete sequence Length = 187937 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 168153 acttcttctttaccaatttg 168172
>gb|AC087429.2| Homo sapiens chromosome 3 clone 2063K18 map 3p, complete sequence Length = 88688 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 tacttcttctttaccaattt 414 |||||||||||||||||||| Sbjct: 1749 tacttcttctttaccaattt 1768
>gb|AC105753.2| Homo sapiens chromosome 3 clone RP11-189A1, complete sequence Length = 146753 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 9584 acttcttctttaccaatttg 9565
>gb|AC098680.3| Homo sapiens BAC clone RP11-600L4 from 4, complete sequence Length = 180918 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 cagcctcggcaacaaggtga 279 |||||||||||||||||||| Sbjct: 63772 cagcctcggcaacaaggtga 63753
>gb|AC099775.2| Homo sapiens chromosome 3 clone RP11-169G24, complete sequence Length = 181443 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 48673 acttcttctttaccaatttg 48654
>gb|AC008411.5| Homo sapiens chromosome 5 clone CTC-281B15, complete sequence Length = 108098 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 5380 acttcttctttaccaatttg 5361
>emb|Z82975.1|HS36J3 Human DNA sequence from clone RP1-36J3 on chromosome X Contains a CpG island, complete sequence Length = 105580 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 88627 acttcttctttaccaatttg 88646
>emb|AL589789.7| Human DNA sequence from clone RP11-478P15 on chromosome 1, complete sequence Length = 180785 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 60072 acttcttctttaccaatttg 60091
>emb|AL590426.6| Human DNA sequence from clone RP11-354K4 on chromosome 6 Contains novel pseudogene, complete sequence Length = 204235 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 198433 acttcttctttaccaatttg 198452
>emb|AL442647.18| Human DNA sequence from clone RP11-72I18 on chromosome X Contains the 5' end of a RuvB-like 2 (E. coli) (RUVBL2) pseudogene and part of a novel gene, complete sequence Length = 60994 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 5972 acttcttctttaccaatttg 5953
>emb|AL158840.14| Human DNA sequence from clone RP11-181B18 on chromosome 1 Contains part of gene KIAA1365 and a novel gene, complete sequence Length = 87665 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 8220 acttcttctttaccaatttg 8201
>gb|AC163035.2| Mus musculus BAC clone RP23-301L2 from chromosome 6, complete sequence Length = 196798 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 398 ttcttctttaccaatttgtgtgtg 421 ||||||||||||||||||| |||| Sbjct: 41668 ttcttctttaccaatttgtatgtg 41645 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 398 ttcttctttaccaatttgtgtgtg 421 ||||||||||||||||||| |||| Sbjct: 144286 ttcttctttaccaatttgtatgtg 144263
>emb|AL022401.2|HS93L7 Human DNA sequence from clone RP1-93L7 on chromosome Xq21 Contains a novel pseudogene similar to RIKEN cDNA 6330577E15Rik, a pseudogene similar to ring finger protein 34 (RNF34) and the 3' end of the CHM gene for choroideremia (Rab escort protein 1), complete sequence Length = 206784 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 118680 acttcttctttaccaatttg 118661
>ref|XM_643089.1| Entamoeba histolytica HM-1:IMSS 19S cap proteasome S2 subunit (524.t00001) partial mRNA Length = 2532 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 478 atccaataaatgaagtaacttgtt 501 |||||||||||||||||| ||||| Sbjct: 1177 atccaataaatgaagtaaattgtt 1154
>gb|AC026436.4| Homo sapiens chromosome 5 clone CTD-2248H3, complete sequence Length = 100899 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 52705 acttcttctttaccaatttg 52724
>emb|X96947.1|MSBACS2GE Musa acuminata bacs2 gene for 1-aminocyclopropane-1-carboxylate synthase Length = 1372 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gtcatggaggccatcgaggg 310 |||||||||||||||||||| Sbjct: 884 gtcatggaggccatcgaggg 903
>emb|X96946.1|MSBACS1GE M.acuminata bacs1 gene Length = 1812 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gtcatggaggccatcgaggg 310 |||||||||||||||||||| Sbjct: 1324 gtcatggaggccatcgaggg 1343
>gb|AC007326.28| Homo sapiens chromosome 22 clone p423 map 22q11, complete sequence Length = 102898 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 cagcctcggcaacaaggtga 279 |||||||||||||||||||| Sbjct: 97076 cagcctcggcaacaaggtga 97057
>gb|AC000069.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 103a2 In DGCR Region, complete sequence Length = 39859 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 cagcctcggcaacaaggtga 279 |||||||||||||||||||| Sbjct: 32394 cagcctcggcaacaaggtga 32375
>emb|CR555307.1| Azoarcus sp. EbN1 plasmid 1 Length = 207355 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 215 cggccaccgcatccagttccggctctac 242 ||||||||| ||||||||||||||||| Sbjct: 109822 cggccaccggctccagttccggctctac 109795 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 215 cggccaccgcatccagttccggctctac 242 ||||||||| ||||||||||||||||| Sbjct: 144212 cggccaccggctccagttccggctctac 144185
>gb|AC016902.4|AC016902 Homo sapiens BAC clone RP11-217B19 from 11, complete sequence Length = 184841 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 gtaattttcatccaataaat 488 |||||||||||||||||||| Sbjct: 143975 gtaattttcatccaataaat 143956
>emb|CR932799.1| Mus musculus chromosome 2, clone RPCI-22-207E02 strain 129/Sv, complete sequence Length = 151675 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 tacttcttctttaccaattt 414 |||||||||||||||||||| Sbjct: 119468 tacttcttctttaccaattt 119487
>emb|CR932797.1| Mus musculus chromosome 2, clone RPCI-22-255I01 and RPCI-22-91F12 strain 129/Sv, complete sequence Length = 122877 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 tacttcttctttaccaattt 414 |||||||||||||||||||| Sbjct: 28471 tacttcttctttaccaattt 28490
>gb|AC011487.5|AC011487 Homo sapiens chromosome 19 clone CTB-167G5, complete sequence Length = 138579 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 cagcctcggcaacaaggtga 279 |||||||||||||||||||| Sbjct: 45486 cagcctcggcaacaaggtga 45467
>gb|AC012512.7| Homo sapiens BAC clone RP11-561O7 from 2, complete sequence Length = 179460 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 87407 acttcttctttaccaatttg 87388
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gaaggcggcctccaggaggg 163 |||||||||||||||||||| Sbjct: 15246 gaaggcggcctccaggaggg 15227
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gccggcggcgaaggcggcct 154 |||||||||||||||||||| Sbjct: 3435003 gccggcggcgaaggcggcct 3434984
>gb|AC019178.7| Homo sapiens BAC clone RP11-235L22 from 2, complete sequence Length = 107330 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 97141 acttcttctttaccaatttg 97160
>gb|AC069410.10| Homo sapiens 3 BAC RP11-32M21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 176924 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 3474 acttcttctttaccaatttg 3455
>dbj|D87817.1| Thermus thermophilus DNA for geranylgeranyl diphosphate synthetase, complete cds Length = 1035 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gaaggcggcctccaggaggg 163 |||||||||||||||||||| Sbjct: 891 gaaggcggcctccaggaggg 872
>dbj|AK106250.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-E02, full insert sequence Length = 1733 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 caacgccaacgccggcggcg 144 |||||||||||||||||||| Sbjct: 588 caacgccaacgccggcggcg 607
>gb|AE005137.1| Halobacterium sp. NRC-1 section 168 of 170 of the complete genome Length = 10467 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 gacatcgacgcggacgagcg 43 |||||||||||||||||||| Sbjct: 3021 gacatcgacgcggacgagcg 3002
>gb|AC153611.12| Mus musculus 6 BAC RP23-110P14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174538 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 tacttcttctttaccaatttgtgt 418 |||||||||||| ||||||||||| Sbjct: 43867 tacttcttcttttccaatttgtgt 43890
>emb|BX571892.9| Mouse DNA sequence from clone RP23-207B21 on chromosome 2, complete sequence Length = 170046 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 tacttcttctttaccaattt 414 |||||||||||||||||||| Sbjct: 149789 tacttcttctttaccaattt 149808
>emb|AL773561.7| Mouse DNA sequence from clone RP23-71D9 on chromosome X, complete sequence Length = 174072 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 tcttctttaccaatttgtgt 418 |||||||||||||||||||| Sbjct: 34769 tcttctttaccaatttgtgt 34788
>emb|X15870.1|TAWIS1 Wheat middle repetitive insertion sequence WIS1 Length = 1601 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ggcgctggtggtgcaggaca 27 |||||||||||||||||||| Sbjct: 1374 ggcgctggtggtgcaggaca 1393
>dbj|AP000802.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-629G13, complete sequence Length = 183165 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 gtaattttcatccaataaat 488 |||||||||||||||||||| Sbjct: 49582 gtaattttcatccaataaat 49563
>dbj|AP001836.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-693I21, complete sequence Length = 145782 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 cagcctcggcaacaaggtga 279 |||||||||||||||||||| Sbjct: 21444 cagcctcggcaacaaggtga 21425
>dbj|AB112361.1| Thermus thermophilus gene for geranylgeranyl diphosphate synthetase, complete cds Length = 993 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gaaggcggcctccaggaggg 163 |||||||||||||||||||| Sbjct: 918 gaaggcggcctccaggaggg 899
>dbj|D32120.1|HALHEFL Halobacterium halobium genes for elongation factor 1alpha, ribosomal protein S10 and tRNA-Ala, complete cds Length = 2015 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 gacatcgacgcggacgagcg 43 |||||||||||||||||||| Sbjct: 1623 gacatcgacgcggacgagcg 1642
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 cttcttctttaccaatttgt 416 |||||||||||||||||||| Sbjct: 1522483 cttcttctttaccaatttgt 1522464
>gb|AC006502.2|AC006502 Homo sapiens, clone hRPK.36_A_1, complete sequence Length = 156736 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 96665 acttcttctttaccaatttg 96646
>gb|AF057718.1|AF057718 Agrobacterium tumefaciens plasmid pTiC58 autoinducer synthase (traI) gene, complete cds; mating pair formation locus, complete sequence; and unknown gene Length = 11003 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 cgccggcggcgaaggcggcc 153 |||||||||||||||||||| Sbjct: 6823 cgccggcggcgaaggcggcc 6804
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 gaaggcggcctccaggaggg 163 |||||||||||||||||||| Sbjct: 1888833 gaaggcggcctccaggaggg 1888852
>gb|AC149051.4| Mus musculus BAC clone RP24-325F10 from 8, complete sequence Length = 184939 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 109304 acttcttctttaccaatttg 109285
>gb|AF060817.1|AF060817 Entamoeba histolytica 19S cap proteasome S2 subunit mRNA, complete cds Length = 2560 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 478 atccaataaatgaagtaacttgtt 501 |||||||||||||||||| ||||| Sbjct: 1177 atccaataaatgaagtaaattgtt 1154
>gb|AC147235.3| Mus musculus BAC clone RP23-353B7 from 6, complete sequence Length = 193668 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 398 ttcttctttaccaatttgtgtgtg 421 ||||||||||||||||||| |||| Sbjct: 51087 ttcttctttaccaatttgtatgtg 51110 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 398 ttcttctttaccaatttgtgtgtg 421 ||||||||||||||||||| |||| Sbjct: 156907 ttcttctttaccaatttgtatgtg 156930
>gb|AC147617.3| Mus musculus BAC clone RP23-442G17 from 6, complete sequence Length = 192625 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 398 ttcttctttaccaatttgtgtgtg 421 ||||||||||||||||||| |||| Sbjct: 53543 ttcttctttaccaatttgtatgtg 53566
>emb|AL732498.15| Mouse DNA sequence from clone RP23-323E6 on chromosome 4, complete sequence Length = 145881 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 ccaggagggggtcaacgactggaa 178 ||||||||||||||| |||||||| Sbjct: 70339 ccaggagggggtcaatgactggaa 70316
>gb|AC087431.3| Homo sapiens chromosome 3 clone RP11-775C23 map 3p, complete sequence Length = 196745 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 tacttcttctttaccaattt 414 |||||||||||||||||||| Sbjct: 128884 tacttcttctttaccaattt 128903
>gb|AC154512.2| Mus musculus BAC clone RP24-70L20 from chromosome 16, complete sequence Length = 166329 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 tcttctttaccaatttgtgt 418 |||||||||||||||||||| Sbjct: 97225 tcttctttaccaatttgtgt 97244
>emb|AL163613.2|CNS01RIJ Human chromosome 14 DNA sequence BAC R-25I19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 150312 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 cagcctcggcaacaaggtga 279 |||||||||||||||||||| Sbjct: 90312 cagcctcggcaacaaggtga 90293
>dbj|AP001198.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-794M8, complete sequence Length = 54513 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 acttcttctttaccaatttg 415 |||||||||||||||||||| Sbjct: 12661 acttcttctttaccaatttg 12642
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 gccaacgccggcggcgaaggcggc 152 |||||| ||||||||||||||||| Sbjct: 1036506 gccaaccccggcggcgaaggcggc 1036529 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 83,143,844 Number of extensions: 4863406 Number of successful extensions: 129801 Number of sequences better than 10.0: 148 Number of HSP's gapped: 129787 Number of HSP's successfully gapped: 180 Length of query: 539 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 517 Effective length of database: 18,508,616,841 Effective search space: 9568954906797 Effective search space used: 9568954906797 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
