| Clone Name | FLbaf86m13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK101285:Os03g0360500 | 289 | 2e-78 | 2 | AK059166:Os03g0360500 | 289 | 2e-78 | 3 | AK100101:Os08g0492100 | 36 | 0.036 | 4 | AK071432:Os04g0508000 | 30 | 2.6 | 5 | AK120193:Os06g0234100 | 25 | 5.4 | 6 | Os02g0460000:Os02g0460000 | 29 | 5.7 | 7 | Os08g0400200:Os08g0400200 | 28 | 9.7 | 8 | Os03g0353600:Os03g0353600 | 28 | 9.7 |
|---|
>AK101285:Os03g0360500 | Length = 178 Score = 289 bits (739), Expect = 2e-78 Identities = 144/177 (81%), Positives = 151/177 (85%), Gaps = 1/177 (0%) Frame = +1 Query: 76 MEKGKGLARRWAVELHDVXXXXXX-PAFPDPPGFTRSAPEADDAASARQRKETEAAWKGQ 252 MEKGKGLARRWAVELHD + PDPPGFTRSAP+ADDAA ARQRK++E AWK Q Sbjct: 1 MEKGKGLARRWAVELHDASSSSSSHSSIPDPPGFTRSAPDADDAAGARQRKDSETAWKAQ 60 Query: 253 KAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGIVFSALWQPFNALRSVGKVFEPFKDPR 432 KAWEVAQAPFKNL AGSTVHLFSIGI FSALWQP +ALRSVGKVFEPFKDPR Sbjct: 61 KAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALRSVGKVFEPFKDPR 120 Query: 433 VDTLAPKLLFTALNLAAMGLGVWKLNTLGLLPTNASDWVSSLSPAREVEYAGGGIPL 603 VDTLAPKL+F ALNLAAMGLGVWKLNTLGLLPTNASDWV SL+PAREVEYAGGGIPL Sbjct: 121 VDTLAPKLVFIALNLAAMGLGVWKLNTLGLLPTNASDWVFSLAPAREVEYAGGGIPL 177
>AK059166:Os03g0360500 | Length = 178 Score = 289 bits (739), Expect = 2e-78 Identities = 144/177 (81%), Positives = 151/177 (85%), Gaps = 1/177 (0%) Frame = +1 Query: 76 MEKGKGLARRWAVELHDVXXXXXX-PAFPDPPGFTRSAPEADDAASARQRKETEAAWKGQ 252 MEKGKGLARRWAVELHD + PDPPGFTRSAP+ADDAA ARQRK++E AWK Q Sbjct: 1 MEKGKGLARRWAVELHDASSSSSSHSSIPDPPGFTRSAPDADDAAGARQRKDSETAWKAQ 60 Query: 253 KAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGIVFSALWQPFNALRSVGKVFEPFKDPR 432 KAWEVAQAPFKNL AGSTVHLFSIGI FSALWQP +ALRSVGKVFEPFKDPR Sbjct: 61 KAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALRSVGKVFEPFKDPR 120 Query: 433 VDTLAPKLLFTALNLAAMGLGVWKLNTLGLLPTNASDWVSSLSPAREVEYAGGGIPL 603 VDTLAPKL+F ALNLAAMGLGVWKLNTLGLLPTNASDWV SL+PAREVEYAGGGIPL Sbjct: 121 VDTLAPKLVFIALNLAAMGLGVWKLNTLGLLPTNASDWVFSLAPAREVEYAGGGIPL 177
>AK100101:Os08g0492100 | Length = 436 Score = 36.2 bits (82), Expect = 0.036 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = -2 Query: 616 RGITSRGSLHQHIQPPEQETVKIPSLMHLSEEDP 515 RG TS+G++ H+QPP + + P L H EDP Sbjct: 204 RGATSQGAVVVHLQPPPVDAIDAPRLQHGVREDP 237
>AK071432:Os04g0508000 | Length = 711 Score = 30.0 bits (66), Expect = 2.6 Identities = 24/88 (27%), Positives = 38/88 (43%) Frame = -1 Query: 596 IPPPAYSTSRAGDSEDTQSDAFVGRRPNVLSFQTPKPIAAKLRAVKSNLGASVSTLGSLN 417 IPP + TQS A P + QT KP + LR+ GA +T+G ++ Sbjct: 141 IPPAGGGADLRNTARRTQSGAEGSGLPAPAAEQTAKPRVSDLRS-----GAGNATVGDVD 195 Query: 416 GSKTFPTDRSALKGCQRAEKTIPMLNRW 333 G + + + Q+ E+T + RW Sbjct: 196 GDQRV---GNGTRSRQQREETATPMPRW 220
>AK120193:Os06g0234100 | Length = 628 Score = 25.0 bits (53), Expect(2) = 5.4 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = +3 Query: 12 QSSKNQTKPEPVDPSVAAAAGDGEGQGSRP 101 Q K KP+P + AAA+ DG S P Sbjct: 51 QKRKRGRKPKPPAAAAAAASSDGHHHPSSP 80 Score = 22.3 bits (46), Expect(2) = 5.4 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +1 Query: 157 PDPPGFTRSAPEADDAASARQRKETEAAWKGQKAWEV 267 P+PP +AP A + R K+ AA + A EV Sbjct: 111 PEPPSDAGAAPHAPPSPPRRGAKKGAAANAKKAAAEV 147
>Os02g0460000:Os02g0460000 | Length = 1246 Score = 28.9 bits (63), Expect = 5.7 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 6/45 (13%) Frame = +3 Query: 42 PVDPSVAAAAGDGEGQGSRPTLGSGAPRRIFLL------LLACLP 158 P P+ AA G G+G R +G G+ R+ LL ACLP Sbjct: 1166 PPFPAGAACGEGGRGRGGRREMGDGSGGRLVLLTASYCCFRACLP 1210
>Os08g0400200:Os08g0400200 | Length = 1292 Score = 28.1 bits (61), Expect = 9.7 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = +3 Query: 3 RKVQSSKNQTKPE-PVDPSVAAAAGDGEGQGSRPTLGSGAPRRIFL 137 R+V S+K Q P+ D +V G G G G RP+ GAP R L Sbjct: 248 RRVVSAKRQFPPDFGRDSAVPLGRGRGRGGGVRPS--DGAPARAVL 291
>Os03g0353600:Os03g0353600 | Length = 2574 Score = 28.1 bits (61), Expect = 9.7 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -2 Query: 784 QSEFGTRETKNITNPNKISPTNPNKISPFTRV*IS 680 +S TRE K +PN++ T P K+ F + IS Sbjct: 2356 RSARSTREEKKNMDPNEVKQTRPQKMMDFRNINIS 2390 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 27,247,685 Number of extensions: 633372 Number of successful extensions: 2201 Number of sequences better than 10.0: 8 Number of HSP's gapped: 2191 Number of HSP's successfully gapped: 9 Length of query: 324 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 223 Effective length of database: 11,355,714 Effective search space: 2532324222 Effective search space used: 2532324222 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)