ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf86m13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK101285:Os03g0360500 289 2e-78
2AK059166:Os03g0360500 289 2e-78
3AK100101:Os08g0492100 36 0.036
4AK071432:Os04g0508000 30 2.6
5AK120193:Os06g0234100 25 5.4
6Os02g0460000:Os02g0460000 29 5.7
7Os08g0400200:Os08g0400200 28 9.7
8Os03g0353600:Os03g0353600 28 9.7

>AK101285:Os03g0360500 |
          Length = 178
 Score =  289 bits (739), Expect = 2e-78
 Identities = 144/177 (81%), Positives = 151/177 (85%), Gaps = 1/177 (0%)
 Frame = +1

Query: 76  MEKGKGLARRWAVELHDVXXXXXX-PAFPDPPGFTRSAPEADDAASARQRKETEAAWKGQ 252
           MEKGKGLARRWAVELHD         + PDPPGFTRSAP+ADDAA ARQRK++E AWK Q
Sbjct: 1   MEKGKGLARRWAVELHDASSSSSSHSSIPDPPGFTRSAPDADDAAGARQRKDSETAWKAQ 60

Query: 253 KAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGIVFSALWQPFNALRSVGKVFEPFKDPR 432
           KAWEVAQAPFKNL         AGSTVHLFSIGI FSALWQP +ALRSVGKVFEPFKDPR
Sbjct: 61  KAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALRSVGKVFEPFKDPR 120

Query: 433 VDTLAPKLLFTALNLAAMGLGVWKLNTLGLLPTNASDWVSSLSPAREVEYAGGGIPL 603
           VDTLAPKL+F ALNLAAMGLGVWKLNTLGLLPTNASDWV SL+PAREVEYAGGGIPL
Sbjct: 121 VDTLAPKLVFIALNLAAMGLGVWKLNTLGLLPTNASDWVFSLAPAREVEYAGGGIPL 177



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>AK059166:Os03g0360500 |
          Length = 178

 Score =  289 bits (739), Expect = 2e-78
 Identities = 144/177 (81%), Positives = 151/177 (85%), Gaps = 1/177 (0%)
 Frame = +1

Query: 76  MEKGKGLARRWAVELHDVXXXXXX-PAFPDPPGFTRSAPEADDAASARQRKETEAAWKGQ 252
           MEKGKGLARRWAVELHD         + PDPPGFTRSAP+ADDAA ARQRK++E AWK Q
Sbjct: 1   MEKGKGLARRWAVELHDASSSSSSHSSIPDPPGFTRSAPDADDAAGARQRKDSETAWKAQ 60

Query: 253 KAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGIVFSALWQPFNALRSVGKVFEPFKDPR 432
           KAWEVAQAPFKNL         AGSTVHLFSIGI FSALWQP +ALRSVGKVFEPFKDPR
Sbjct: 61  KAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALRSVGKVFEPFKDPR 120

Query: 433 VDTLAPKLLFTALNLAAMGLGVWKLNTLGLLPTNASDWVSSLSPAREVEYAGGGIPL 603
           VDTLAPKL+F ALNLAAMGLGVWKLNTLGLLPTNASDWV SL+PAREVEYAGGGIPL
Sbjct: 121 VDTLAPKLVFIALNLAAMGLGVWKLNTLGLLPTNASDWVFSLAPAREVEYAGGGIPL 177



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>AK100101:Os08g0492100 |
          Length = 436

 Score = 36.2 bits (82), Expect = 0.036
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -2

Query: 616 RGITSRGSLHQHIQPPEQETVKIPSLMHLSEEDP 515
           RG TS+G++  H+QPP  + +  P L H   EDP
Sbjct: 204 RGATSQGAVVVHLQPPPVDAIDAPRLQHGVREDP 237



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>AK071432:Os04g0508000 |
          Length = 711

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 24/88 (27%), Positives = 38/88 (43%)
 Frame = -1

Query: 596 IPPPAYSTSRAGDSEDTQSDAFVGRRPNVLSFQTPKPIAAKLRAVKSNLGASVSTLGSLN 417
           IPP          +  TQS A     P   + QT KP  + LR+     GA  +T+G ++
Sbjct: 141 IPPAGGGADLRNTARRTQSGAEGSGLPAPAAEQTAKPRVSDLRS-----GAGNATVGDVD 195

Query: 416 GSKTFPTDRSALKGCQRAEKTIPMLNRW 333
           G +      +  +  Q+ E+T   + RW
Sbjct: 196 GDQRV---GNGTRSRQQREETATPMPRW 220



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>AK120193:Os06g0234100 |
          Length = 628

 Score = 25.0 bits (53), Expect(2) = 5.4
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 12  QSSKNQTKPEPVDPSVAAAAGDGEGQGSRP 101
           Q  K   KP+P   + AAA+ DG    S P
Sbjct: 51  QKRKRGRKPKPPAAAAAAASSDGHHHPSSP 80



 Score = 22.3 bits (46), Expect(2) = 5.4
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 157 PDPPGFTRSAPEADDAASARQRKETEAAWKGQKAWEV 267
           P+PP    +AP A  +   R  K+  AA   + A EV
Sbjct: 111 PEPPSDAGAAPHAPPSPPRRGAKKGAAANAKKAAAEV 147



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>Os02g0460000:Os02g0460000 |
          Length = 1246

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
 Frame = +3

Query: 42   PVDPSVAAAAGDGEGQGSRPTLGSGAPRRIFLL------LLACLP 158
            P  P+ AA    G G+G R  +G G+  R+ LL        ACLP
Sbjct: 1166 PPFPAGAACGEGGRGRGGRREMGDGSGGRLVLLTASYCCFRACLP 1210



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>Os08g0400200:Os08g0400200 |
          Length = 1292

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 3   RKVQSSKNQTKPE-PVDPSVAAAAGDGEGQGSRPTLGSGAPRRIFL 137
           R+V S+K Q  P+   D +V    G G G G RP+   GAP R  L
Sbjct: 248 RRVVSAKRQFPPDFGRDSAVPLGRGRGRGGGVRPS--DGAPARAVL 291



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>Os03g0353600:Os03g0353600 |
          Length = 2574

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 784  QSEFGTRETKNITNPNKISPTNPNKISPFTRV*IS 680
            +S   TRE K   +PN++  T P K+  F  + IS
Sbjct: 2356 RSARSTREEKKNMDPNEVKQTRPQKMMDFRNINIS 2390


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 27,247,685
Number of extensions: 633372
Number of successful extensions: 2201
Number of sequences better than 10.0: 8
Number of HSP's gapped: 2191
Number of HSP's successfully gapped: 9
Length of query: 324
Length of database: 15,399,855
Length adjustment: 101
Effective length of query: 223
Effective length of database: 11,355,714
Effective search space: 2532324222
Effective search space used: 2532324222
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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