ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf84c08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY770627.1| Hordeum vulgare subsp. vulgare outward-rectifying potassium channel (KCO1) mRNA, complete cds Length = 1385 Score = 2631 bits (1327), Expect = 0.0 Identities = 1336/1339 (99%) Strand = Plus / Plus Query: 367 aggtttttgattgtgacggcaattcgcaacctaaaccaatgtctgacaacagtattcaac 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33 aggtttttgattgtgacggcaattcgcaacctaaaccaatgtctgacaacagtattcaac 92 Query: 427 gagcattggtacctgataaccacaacgccgacgtgctccaaaggaagccgttagaaggag 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93 gagcattggtacctgataaccacaacgccgacgtgctccaaaggaagccgttagaaggag 152 Query: 487 ctaaacggttccgaagaagcaggtcagctcccagatcagagaccgatcagaaaccagaag 546 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 153 ctaaacggttccgaagaagcaggtcagctcccagatcagaggccgatcagaaaccagaag 212 Query: 547 aaaacggctcgtcgcctccagccaaggagttgctcagcgtgatacggccgagctttagac 606 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 aaaacggctcgtcgcctccagccaaggagttgctcagcgtgatacggccgagctttagac 272 Query: 607 tagcagggctcctcctatttctctacctgctagcgggcgtcgtcgtcttttaccttgtca 666 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 tagcagggctcctcctatttctctacctgctagcgggcgtcgtcgtcttttaccttgtca 332 Query: 667 tggatcagttatctggcaagagaaccaacagggtgcttgacgccctgtacttctgcattg 726 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 333 tggatcagttatctggcaagagaaccaacagggtgcttgacgccctgtacttctgcattg 392 Query: 727 tcacgatgacatcggttggttacggagaccttgtccctaacagcgacacggcaaagctgc 786 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 393 tcacgatgacatcggttggctacggagaccttgtccctaacagcgacacggcaaagctgc 452 Query: 787 tcgcttgtgtgttcgtcttcacaggcatggcgattattgctctctttgtgagcaagtcgg 846 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 tcgcttgtgtgttcgtcttcacaggcatggcgattattgctctctttgtgagcaagtcgg 512 Query: 847 cggattatctcgtggagaagcaggaggtgctgttcttcaaggcactgcacatgaacatga 906 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 513 cggattatctcgtggagaagcaggaggtgctgttcttcaaggcactgcacatgaacatga 572 Query: 907 agtgtagcgaggccaaaatgctcaggcaaattgagacaaacaagacaaagtacaaattct 966 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 agtgtagcgaggccaaaatgctcaggcaaattgagacaaacaagacaaagtacaaattct 632 Query: 967 acacggctgccctgcttcttatgacaaccattgttgtagggactatttttctctggaagg 1026 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 633 acacggctgccctgcttcttatgacaaccattgttgtagggactgtttttctctggaagg 692 Query: 1027 ttgaaaagctgagccttgtcgattccttttattgtgtctgtgccacaataactaccctgg 1086 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 ttgaaaagctgagccttgtcgattccttttattgtgtctgtgccacaataactaccctgg 752 Query: 1087 gctatggggataaaagcttctcgtccaaattggggcgcactttcgcggtattttggataa 1146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 gctatggggataaaagcttctcgtccaaattggggcgcactttcgcggtattttggataa 812 Query: 1147 ttacgagcaccataatcctggcgctgttcttcatgtaccttgctgagatctacaccgagc 1206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 ttacgagcaccataatcctggcgctgttcttcatgtaccttgctgagatctacaccgagc 872 Query: 1207 gacggcagaaaatgctggccaaatgggttctcacacggagaataacaaacatggatcttg 1266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 873 gacggcagaaaatgctggccaaatgggttctcacacggagaataacaaacatggatcttg 932 Query: 1267 aagcagctgatctggataatgatcgaaaagtgggtgctgctgaatttgtcgtgtacaagc 1326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 933 aagcagctgatctggataatgatcgaaaagtgggtgctgctgaatttgtcgtgtacaagc 992 Query: 1327 tcaaagaactggggaagatcagccaagaagacatatcttgtttcctagaggagtttgaga 1386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 tcaaagaactggggaagatcagccaagaagacatatcttgtttcctagaggagtttgaga 1052 Query: 1387 aactcgatgttgaccagtccggcacactctccacctatgaccttactcaggcacaatccg 1446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1053 aactcgatgttgaccagtccggcacactctccacctatgaccttactcaggcacaatccg 1112 Query: 1447 gtcagtgatgaacatatgggcttgtacttaattctacagcttaaatactatagttgaatg 1506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1113 gtcagtgatgaacatatgggcttgtacttaattctacagcttaaatactatagttgaatg 1172 Query: 1507 gtcggttaatgctgttaattagttctgtaatcttgtaaagtgtcaaaagatacgaccttg 1566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1173 gtcggttaatgctgttaattagttctgtaatcttgtaaagtgtcaaaagatacgaccttg 1232 Query: 1567 ttgagctcctacatgtatttaacacaatggatctgctcatatgcacccggacatgtgtaa 1626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1233 ttgagctcctacatgtatttaacacaatggatctgctcatatgcacccggacatgtgtaa 1292 Query: 1627 gaaagaggtatttggtgatgctttgataagcttgtgtacctgtgtaaatgaaatttgtta 1686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1293 gaaagaggtatttggtgatgctttgataagcttgtgtacctgtgtaaatgaaatttgtta 1352 Query: 1687 agctattgttttccagtca 1705 ||||||||||||||||||| Sbjct: 1353 agctattgttttccagtca 1371
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 1582 bits (798), Expect = 0.0 Identities = 900/934 (96%) Strand = Plus / Minus Query: 367 aggtttttgattgtgacggcaattcgcaacctaaaccaatgtctgacaacagtattcaac 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93782 aggtttttgattgtgacggcaattcgcaacctaaaccaatgtctgacaacagtattcaac 93723 Query: 427 gagcattggtacctgataaccacaacgccgacgtgctccaaaggaagccgttagaaggag 486 |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 93722 gagcattgctacctgataaccacaacgccgacgtgctccaaaggaagccgtcagaaggag 93663 Query: 487 ctaaacggttccgaagaagcaggtcagctcccagatcagagaccgatcagaaaccagaag 546 ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 93662 ctaaacggttccgaagaagcaggtcggctcccagatcagaggccgatcagaaaccagaag 93603 Query: 547 aaaacggctcgtcgcctccagccaaggagttgctcagcgtgatacggccgagctttagac 606 |||| |||||| ||| ||||| |||||||||| ||||||||||||| ||||||||||||| Sbjct: 93602 aaaatggctcgccgcttccagacaaggagttgttcagcgtgatacgaccgagctttagac 93543 Query: 607 tagcagggctcctcctatttctctacctgctagcgggcgtcgtcgtcttttaccttgtca 666 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93542 tagcagggctcctcctatttctctacctgctagcgggcgtcgtcgtcttttaccttgtca 93483 Query: 667 tggatcagttatctggcaagagaaccaacagggtgcttgacgccctgtacttctgcattg 726 ||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||| Sbjct: 93482 tggatcagttatctggcaagagaaccaacagggtgcttgacgcactctacttctgtattg 93423 Query: 727 tcacgatgacatcggttggttacggagaccttgtccctaacagcgacacggcaaagctgc 786 |||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||| | Sbjct: 93422 tcacgatgacatcggttggttacggagaccttgtccctcacagtgacacggcgaagctcc 93363 Query: 787 tcgcttgtgtgttcgtcttcacaggcatggcgattattgctctctttgtgagcaagtcgg 846 |||| ||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 93362 tcgcctgtgttttcgtcttcactggcatggcgtttattgctctctttgtgagcaagtcgg 93303 Query: 847 cggattatctcgtggagaagcaggaggtgctgttcttcaaggcactgcacatgaacatga 906 | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93302 cagattatctcgtcgagaagcaggaggtgctgttcttcaaggcactgcacatgaacatga 93243 Query: 907 agtgtagcgaggccaaaatgctcaggcaaattgagacaaacaagacaaagtacaaattct 966 ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93242 agtttagcaaggccaaaatgctcaggcaaattgagacaaacaagacaaagtacaaattct 93183 Query: 967 acacggctgccctgcttcttatgacaaccattgttgtagggactatttttctctggaagg 1026 |||| |||||||| |||||| |||||||||||||||| |||||| ||||||||||||||| Sbjct: 93182 acactgctgccctacttcttgtgacaaccattgttgtggggactgtttttctctggaagg 93123 Query: 1027 ttgaaaagctgagccttgtcgattccttttattgtgtctgtgccacaataactaccctgg 1086 |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 93122 ttgagaagctgagccttgtcgattccttttattgtgtctgtgccacaataactgccctgg 93063 Query: 1087 gctatggggataaaagcttctcgtccaaattggggcgcactttcgcggtattttggataa 1146 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 93062 gctatggggataaaagcttctcgtccgaattggggcgcactttcgcggtattttggataa 93003 Query: 1147 ttacgagcaccataatcctggcgctgttcttcatgtaccttgctgagatctacaccgagc 1206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 93002 ttacgagcaccataatcctggcgctgttcttcatgtaccttgctgagatctacacccagc 92943 Query: 1207 gacggcagaaaatgctggccaaatgggttctcacacggagaataacaaacatggatcttg 1266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92942 gacggcagaaaatgctggccaaatgggttctcacacggagaataacaaacatggatcttg 92883 Query: 1267 aagcagctgatctggataatgatcgaaaagtggg 1300 |||||||||||||||||||||||||||||||||| Sbjct: 92882 aagcagctgatctggataatgatcgaaaagtggg 92849 Score = 787 bits (397), Expect = 0.0 Identities = 418/425 (98%) Strand = Plus / Minus Query: 1300 gtgctgctgaatttgtcgtgtacaagctcaaagaactggggaagatcagccaagaagaca 1359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92745 gtgctgctgaatttgtcgtgtacaagctcaaagaactggggaagatcagccaagaagaca 92686 Query: 1360 tatcttgtttcctagaggagtttgagaaactcgatgttgaccagtccggcacactctcca 1419 |||||| ||| ||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 92685 tatcttcttttctagaggagtttgagaaactcgacgttgaccagtccggcacgctctcca 92626 Query: 1420 cctatgaccttactcaggcacaatccggtcagtgatgaacatatgggcttgtacttaatt 1479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92625 cctatgaccttactcaggcacaatccggtcagtgatgaacatatgggcttgtacttaatt 92566 Query: 1480 ctacagcttaaatactatagttgaatggtcggttaatgctgttaattagttctgtaatct 1539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92565 ctacagcttaaatactatagttgaatggtcggttaatgctgttaattagttctgtaatct 92506 Query: 1540 tgtaaagtgtcaaaagatacgaccttgttgagctcctacatgtatttaacacaatggatc 1599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92505 tgtaaagtgtcaaaagatacgaccttgttgagctcctacatgtatttaacacaatggatc 92446 Query: 1600 tgctcatatgcacccggacatgtgtaagaaagaggtatttggtgatgctttgataagctt 1659 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92445 tgctcatatgcacctggacatgtgtaagaaagaggtatttggtgatgctttgataagctt 92386 Query: 1660 gtgtacctgtgtaaatgaaatttgttaagctattgttttccagtcatgaaatatttccag 1719 ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 92385 gtgtacctgtgtaaatgaagtttgctaagctattgttttccagtcatgaaatatttccag 92326 Query: 1720 cttcc 1724 ||||| Sbjct: 92325 cttcc 92321 Score = 117 bits (59), Expect = 1e-22 Identities = 68/71 (95%) Strand = Plus / Minus Query: 76 gccggccacgtcaaagcggcgggacctctacagctcaacccacgcggcgccaacacgtag 135 ||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 94643 gccggccacgtcaaagccgcgggacctccacagctcaacccacgcgacgccaacacgtag 94584 Query: 136 agagatccggc 146 ||||||||||| Sbjct: 94583 agagatccggc 94573 Score = 71.9 bits (36), Expect = 7e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 205 ggtcgcagctcgggtcgacaaaaagcgagccaacgcggag 244 |||| ||||||||||||||||||||||||||||||||||| Sbjct: 94566 ggtctcagctcgggtcgacaaaaagcgagccaacgcggag 94527 Score = 60.0 bits (30), Expect = 3e-05 Identities = 33/34 (97%) Strand = Plus / Minus Query: 333 ccaaagcgtcgcccagcttccgtcggccggaggg 366 ||||||||||||| |||||||||||||||||||| Sbjct: 94522 ccaaagcgtcgcctagcttccgtcggccggaggg 94489
>ref|NM_001057833.1| Oryza sativa (japonica cultivar-group) Os03g0752300 (Os03g0752300) mRNA, complete cds Length = 1672 Score = 507 bits (256), Expect = e-140 Identities = 703/852 (82%) Strand = Plus / Plus Query: 603 agactagcagggctcctcctatttctctacctgctagcgggcgtcgtcgtcttttacctt 662 ||||||| ||| || ||||| ||| |||| || |||| ||||||| | | |||||| | Sbjct: 576 agactagtaggacttctcctttttatctatcttctagtgggcgtcctggccttttatgct 635 Query: 663 gtcatggatcagttatctggcaagagaaccaacagggtgcttgacgccctgtacttctgc 722 ||||||||| || |||| |||||| |||| || || |||||||||||| |||||||||| Sbjct: 636 gtcatggatgagatatcaggcaagcgaacaaatagagtgcttgacgccttgtacttctgt 695 Query: 723 attgtcacgatgacatcggttggttacggagaccttgtccctaacagcgacacggcaaag 782 ||||||| ||||| | || || || |||||||| ||||| |||| ||||| |||| Sbjct: 696 gttgtcacaatgaccaccgtcggctatggagacctcgtcccaaacaatgacacaacaaaa 755 Query: 783 ctgctcgcttgtgtgttcgtcttcacaggcatggcgattattgctctctttgtgagcaag 842 ||||| ||||||| |||||||||| || ||||| || ||||||||||||| ||||| Sbjct: 756 ctgcttgcttgtgctttcgtcttcatgggtatggcagttgttgctctctttgtcagcaaa 815 Query: 843 tcggcggattatctcgtggagaagcaggaggtgctgttcttcaaggcactgcacatgaac 902 || |||||||| || |||||||||||||||||||||||||| ||| |||||| ||| Sbjct: 816 gtagcagattatcttgttgagaagcaggaggtgctgttcttcaaagcattgcacacgaat 875 Query: 903 atgaagtgtagcgaggccaaaatgctcaggcaaattgagacaaacaagacaaagtacaaa 962 ||||| || | ||| |||| ||||| || ||| |||||||||| || |||||||||| Sbjct: 876 ctgaagggtggtgagaccaagatgcttagagcaatcgagacaaacaggataaagtacaaa 935 Query: 963 ttctacacggctgccctgcttcttatgacaaccattgttgtagggactatttttctctgg 1022 || ||||| ||| |||||||| || | ||||| || ||||| | ||||| ||| Sbjct: 936 ttttacacaaatgcactgcttctggtgctatccattatttctgggaccgtatttctgtgg 995 Query: 1023 aaggttgaaaagctgagccttgtcgattccttttattgtgtctgtgccacaataactacc 1082 || || || || ||||| ||||| |||||||| || ||||| ||||||||||| |||||| Sbjct: 996 aaagtggagaaactgagtcttgttgattccttctactgtgtatgtgccacaatcactacc 1055 Query: 1083 ctgggctatggggataaaagcttctcgtccaaattggggcgcactttcgcggtattttgg 1142 ||||| |||||||||||||||||||| |||||| |||| || ||||||||| |||||| Sbjct: 1056 ctgggttatggggataaaagcttctcatccaaactgggacgtgttttcgcggtcttttgg 1115 Query: 1143 ataattacgagcaccataatcctggcgctgttcttcatgtaccttgctgagatctacacc 1202 || || |||||||| || ||| |||| | |||||||||||||||||||||||||||||| Sbjct: 1116 attatcacgagcactatcatcatggcacaattcttcatgtaccttgctgagatctacacc 1175 Query: 1203 gagcgacggcagaaaatgctggccaaatgggttctcacacggagaataacaaacatggat 1262 |||||||||||||||||||||||||| |||||||||||||||| ||| ||||| |||||| Sbjct: 1176 gagcgacggcagaaaatgctggccaattgggttctcacacggaaaatgacaaagatggat 1235 Query: 1263 cttgaagcagctgatctggataatgatcgaaaagtgggtgctgctgaatttgtcgtgtac 1322 ||||| ||||| ||||||||| |||||||| |||| |||||||| |||||||| |||||| Sbjct: 1236 cttgaggcagccgatctggatgatgatcgacaagttggtgctgcagaatttgttgtgtac 1295 Query: 1323 aagctcaaagaactggggaagatcagccaagaagacatatcttgtttcctagaggagttt 1382 ||||||||||||||||| ||||||| |||||| || || |||| ||| || ||||||||| Sbjct: 1296 aagctcaaagaactgggtaagatcaaccaagaggagatttcttcttttctggaggagttt 1355 Query: 1383 gagaaactcgatgttgaccagtccggcacactctccacctatgaccttactcaggcacaa 1442 || || |||||||| ||||| || ||||| |||||| | |||||||| || | |||||| Sbjct: 1356 gaaaagctcgatgtcgaccactctggcactctctccccatatgacctgaccctagcacaa 1415 Query: 1443 tccggtcagtga 1454 || | ||||||| Sbjct: 1416 tctgctcagtga 1427
>dbj|AK069303.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012L24, full insert sequence Length = 1674 Score = 507 bits (256), Expect = e-140 Identities = 703/852 (82%) Strand = Plus / Plus Query: 603 agactagcagggctcctcctatttctctacctgctagcgggcgtcgtcgtcttttacctt 662 ||||||| ||| || ||||| ||| |||| || |||| ||||||| | | |||||| | Sbjct: 578 agactagtaggacttctcctttttatctatcttctagtgggcgtcctggccttttatgct 637 Query: 663 gtcatggatcagttatctggcaagagaaccaacagggtgcttgacgccctgtacttctgc 722 ||||||||| || |||| |||||| |||| || || |||||||||||| |||||||||| Sbjct: 638 gtcatggatgagatatcaggcaagcgaacaaatagagtgcttgacgccttgtacttctgt 697 Query: 723 attgtcacgatgacatcggttggttacggagaccttgtccctaacagcgacacggcaaag 782 ||||||| ||||| | || || || |||||||| ||||| |||| ||||| |||| Sbjct: 698 gttgtcacaatgaccaccgtcggctatggagacctcgtcccaaacaatgacacaacaaaa 757 Query: 783 ctgctcgcttgtgtgttcgtcttcacaggcatggcgattattgctctctttgtgagcaag 842 ||||| ||||||| |||||||||| || ||||| || ||||||||||||| ||||| Sbjct: 758 ctgcttgcttgtgctttcgtcttcatgggtatggcagttgttgctctctttgtcagcaaa 817 Query: 843 tcggcggattatctcgtggagaagcaggaggtgctgttcttcaaggcactgcacatgaac 902 || |||||||| || |||||||||||||||||||||||||| ||| |||||| ||| Sbjct: 818 gtagcagattatcttgttgagaagcaggaggtgctgttcttcaaagcattgcacacgaat 877 Query: 903 atgaagtgtagcgaggccaaaatgctcaggcaaattgagacaaacaagacaaagtacaaa 962 ||||| || | ||| |||| ||||| || ||| |||||||||| || |||||||||| Sbjct: 878 ctgaagggtggtgagaccaagatgcttagagcaatcgagacaaacaggataaagtacaaa 937 Query: 963 ttctacacggctgccctgcttcttatgacaaccattgttgtagggactatttttctctgg 1022 || ||||| ||| |||||||| || | ||||| || ||||| | ||||| ||| Sbjct: 938 ttttacacaaatgcactgcttctggtgctatccattatttctgggaccgtatttctgtgg 997 Query: 1023 aaggttgaaaagctgagccttgtcgattccttttattgtgtctgtgccacaataactacc 1082 || || || || ||||| ||||| |||||||| || ||||| ||||||||||| |||||| Sbjct: 998 aaagtggagaaactgagtcttgttgattccttctactgtgtatgtgccacaatcactacc 1057 Query: 1083 ctgggctatggggataaaagcttctcgtccaaattggggcgcactttcgcggtattttgg 1142 ||||| |||||||||||||||||||| |||||| |||| || ||||||||| |||||| Sbjct: 1058 ctgggttatggggataaaagcttctcatccaaactgggacgtgttttcgcggtcttttgg 1117 Query: 1143 ataattacgagcaccataatcctggcgctgttcttcatgtaccttgctgagatctacacc 1202 || || |||||||| || ||| |||| | |||||||||||||||||||||||||||||| Sbjct: 1118 attatcacgagcactatcatcatggcacaattcttcatgtaccttgctgagatctacacc 1177 Query: 1203 gagcgacggcagaaaatgctggccaaatgggttctcacacggagaataacaaacatggat 1262 |||||||||||||||||||||||||| |||||||||||||||| ||| ||||| |||||| Sbjct: 1178 gagcgacggcagaaaatgctggccaattgggttctcacacggaaaatgacaaagatggat 1237 Query: 1263 cttgaagcagctgatctggataatgatcgaaaagtgggtgctgctgaatttgtcgtgtac 1322 ||||| ||||| ||||||||| |||||||| |||| |||||||| |||||||| |||||| Sbjct: 1238 cttgaggcagccgatctggatgatgatcgacaagttggtgctgcagaatttgttgtgtac 1297 Query: 1323 aagctcaaagaactggggaagatcagccaagaagacatatcttgtttcctagaggagttt 1382 ||||||||||||||||| ||||||| |||||| || || |||| ||| || ||||||||| Sbjct: 1298 aagctcaaagaactgggtaagatcaaccaagaggagatttcttcttttctggaggagttt 1357 Query: 1383 gagaaactcgatgttgaccagtccggcacactctccacctatgaccttactcaggcacaa 1442 || || |||||||| ||||| || ||||| |||||| | |||||||| || | |||||| Sbjct: 1358 gaaaagctcgatgtcgaccactctggcactctctccccatatgacctgaccctagcacaa 1417 Query: 1443 tccggtcagtga 1454 || | ||||||| Sbjct: 1418 tctgctcagtga 1429
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0032E21, complete sequence Length = 137580 Score = 394 bits (199), Expect = e-106 Identities = 571/695 (82%) Strand = Plus / Plus Query: 603 agactagcagggctcctcctatttctctacctgctagcgggcgtcgtcgtcttttacctt 662 ||||||| ||| || ||||| ||| |||| || |||| ||||||| | | |||||| | Sbjct: 80233 agactagtaggacttctcctttttatctatcttctagtgggcgtcctggccttttatgct 80292 Query: 663 gtcatggatcagttatctggcaagagaaccaacagggtgcttgacgccctgtacttctgc 722 ||||||||| || |||| |||||| |||| || || |||||||||||| |||||||||| Sbjct: 80293 gtcatggatgagatatcaggcaagcgaacaaatagagtgcttgacgccttgtacttctgt 80352 Query: 723 attgtcacgatgacatcggttggttacggagaccttgtccctaacagcgacacggcaaag 782 ||||||| ||||| | || || || |||||||| ||||| |||| ||||| |||| Sbjct: 80353 gttgtcacaatgaccaccgtcggctatggagacctcgtcccaaacaatgacacaacaaaa 80412 Query: 783 ctgctcgcttgtgtgttcgtcttcacaggcatggcgattattgctctctttgtgagcaag 842 ||||| ||||||| |||||||||| || ||||| || ||||||||||||| ||||| Sbjct: 80413 ctgcttgcttgtgctttcgtcttcatgggtatggcagttgttgctctctttgtcagcaaa 80472 Query: 843 tcggcggattatctcgtggagaagcaggaggtgctgttcttcaaggcactgcacatgaac 902 || |||||||| || |||||||||||||||||||||||||| ||| |||||| ||| Sbjct: 80473 gtagcagattatcttgttgagaagcaggaggtgctgttcttcaaagcattgcacacgaat 80532 Query: 903 atgaagtgtagcgaggccaaaatgctcaggcaaattgagacaaacaagacaaagtacaaa 962 ||||| || | ||| |||| ||||| || ||| |||||||||| || |||||||||| Sbjct: 80533 ctgaagggtggtgagaccaagatgcttagagcaatcgagacaaacaggataaagtacaaa 80592 Query: 963 ttctacacggctgccctgcttcttatgacaaccattgttgtagggactatttttctctgg 1022 || ||||| ||| |||||||| || | ||||| || ||||| | ||||| ||| Sbjct: 80593 ttttacacaaatgcactgcttctggtgctatccattatttctgggaccgtatttctgtgg 80652 Query: 1023 aaggttgaaaagctgagccttgtcgattccttttattgtgtctgtgccacaataactacc 1082 || || || || ||||| ||||| |||||||| || ||||| ||||||||||| |||||| Sbjct: 80653 aaagtggagaaactgagtcttgttgattccttctactgtgtatgtgccacaatcactacc 80712 Query: 1083 ctgggctatggggataaaagcttctcgtccaaattggggcgcactttcgcggtattttgg 1142 ||||| |||||||||||||||||||| |||||| |||| || ||||||||| |||||| Sbjct: 80713 ctgggttatggggataaaagcttctcatccaaactgggacgtgttttcgcggtcttttgg 80772 Query: 1143 ataattacgagcaccataatcctggcgctgttcttcatgtaccttgctgagatctacacc 1202 || || |||||||| || ||| |||| | |||||||||||||||||||||||||||||| Sbjct: 80773 attatcacgagcactatcatcatggcacaattcttcatgtaccttgctgagatctacacc 80832 Query: 1203 gagcgacggcagaaaatgctggccaaatgggttctcacacggagaataacaaacatggat 1262 |||||||||||||||||||||||||| |||||||||||||||| ||| ||||| |||||| Sbjct: 80833 gagcgacggcagaaaatgctggccaattgggttctcacacggaaaatgacaaagatggat 80892 Query: 1263 cttgaagcagctgatctggataatgatcgaaaagt 1297 ||||| ||||| ||||||||| |||||||| |||| Sbjct: 80893 cttgaggcagccgatctggatgatgatcgacaagt 80927 Score = 117 bits (59), Expect = 1e-22 Identities = 131/155 (84%) Strand = Plus / Plus Query: 1300 gtgctgctgaatttgtcgtgtacaagctcaaagaactggggaagatcagccaagaagaca 1359 ||||||| |||||||| ||||||||||||||||||||||| ||||||| |||||| || | Sbjct: 81016 gtgctgcagaatttgttgtgtacaagctcaaagaactgggtaagatcaaccaagaggaga 81075 Query: 1360 tatcttgtttcctagaggagtttgagaaactcgatgttgaccagtccggcacactctcca 1419 | |||| ||| || ||||||||||| || |||||||| ||||| || ||||| |||||| Sbjct: 81076 tttcttcttttctggaggagtttgaaaagctcgatgtcgaccactctggcactctctccc 81135 Query: 1420 cctatgaccttactcaggcacaatccggtcagtga 1454 | |||||||| || | |||||||| | ||||||| Sbjct: 81136 catatgacctgaccctagcacaatctgctcagtga 81170
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 394 bits (199), Expect = e-106 Identities = 571/695 (82%) Strand = Plus / Plus Query: 603 agactagcagggctcctcctatttctctacctgctagcgggcgtcgtcgtcttttacctt 662 ||||||| ||| || ||||| ||| |||| || |||| ||||||| | | |||||| | Sbjct: 38840 agactagtaggacttctcctttttatctatcttctagtgggcgtcctggccttttatgct 38899 Query: 663 gtcatggatcagttatctggcaagagaaccaacagggtgcttgacgccctgtacttctgc 722 ||||||||| || |||| |||||| |||| || || |||||||||||| |||||||||| Sbjct: 38900 gtcatggatgagatatcaggcaagcgaacaaatagagtgcttgacgccttgtacttctgt 38959 Query: 723 attgtcacgatgacatcggttggttacggagaccttgtccctaacagcgacacggcaaag 782 ||||||| ||||| | || || || |||||||| ||||| |||| ||||| |||| Sbjct: 38960 gttgtcacaatgaccaccgtcggctatggagacctcgtcccaaacaatgacacaacaaaa 39019 Query: 783 ctgctcgcttgtgtgttcgtcttcacaggcatggcgattattgctctctttgtgagcaag 842 ||||| ||||||| |||||||||| || ||||| || ||||||||||||| ||||| Sbjct: 39020 ctgcttgcttgtgctttcgtcttcatgggtatggcagttgttgctctctttgtcagcaaa 39079 Query: 843 tcggcggattatctcgtggagaagcaggaggtgctgttcttcaaggcactgcacatgaac 902 || |||||||| || |||||||||||||||||||||||||| ||| |||||| ||| Sbjct: 39080 gtagcagattatcttgttgagaagcaggaggtgctgttcttcaaagcattgcacacgaat 39139 Query: 903 atgaagtgtagcgaggccaaaatgctcaggcaaattgagacaaacaagacaaagtacaaa 962 ||||| || | ||| |||| ||||| || ||| |||||||||| || |||||||||| Sbjct: 39140 ctgaagggtggtgagaccaagatgcttagagcaatcgagacaaacaggataaagtacaaa 39199 Query: 963 ttctacacggctgccctgcttcttatgacaaccattgttgtagggactatttttctctgg 1022 || ||||| ||| |||||||| || | ||||| || ||||| | ||||| ||| Sbjct: 39200 ttttacacaaatgcactgcttctggtgctatccattatttctgggaccgtatttctgtgg 39259 Query: 1023 aaggttgaaaagctgagccttgtcgattccttttattgtgtctgtgccacaataactacc 1082 || || || || ||||| ||||| |||||||| || ||||| ||||||||||| |||||| Sbjct: 39260 aaagtggagaaactgagtcttgttgattccttctactgtgtatgtgccacaatcactacc 39319 Query: 1083 ctgggctatggggataaaagcttctcgtccaaattggggcgcactttcgcggtattttgg 1142 ||||| |||||||||||||||||||| |||||| |||| || ||||||||| |||||| Sbjct: 39320 ctgggttatggggataaaagcttctcatccaaactgggacgtgttttcgcggtcttttgg 39379 Query: 1143 ataattacgagcaccataatcctggcgctgttcttcatgtaccttgctgagatctacacc 1202 || || |||||||| || ||| |||| | |||||||||||||||||||||||||||||| Sbjct: 39380 attatcacgagcactatcatcatggcacaattcttcatgtaccttgctgagatctacacc 39439 Query: 1203 gagcgacggcagaaaatgctggccaaatgggttctcacacggagaataacaaacatggat 1262 |||||||||||||||||||||||||| |||||||||||||||| ||| ||||| |||||| Sbjct: 39440 gagcgacggcagaaaatgctggccaattgggttctcacacggaaaatgacaaagatggat 39499 Query: 1263 cttgaagcagctgatctggataatgatcgaaaagt 1297 ||||| ||||| ||||||||| |||||||| |||| Sbjct: 39500 cttgaggcagccgatctggatgatgatcgacaagt 39534 Score = 117 bits (59), Expect = 1e-22 Identities = 131/155 (84%) Strand = Plus / Plus Query: 1300 gtgctgctgaatttgtcgtgtacaagctcaaagaactggggaagatcagccaagaagaca 1359 ||||||| |||||||| ||||||||||||||||||||||| ||||||| |||||| || | Sbjct: 39623 gtgctgcagaatttgttgtgtacaagctcaaagaactgggtaagatcaaccaagaggaga 39682 Query: 1360 tatcttgtttcctagaggagtttgagaaactcgatgttgaccagtccggcacactctcca 1419 | |||| ||| || ||||||||||| || |||||||| ||||| || ||||| |||||| Sbjct: 39683 tttcttcttttctggaggagtttgaaaagctcgatgtcgaccactctggcactctctccc 39742 Query: 1420 cctatgaccttactcaggcacaatccggtcagtga 1454 | |||||||| || | |||||||| | ||||||| Sbjct: 39743 catatgacctgaccctagcacaatctgctcagtga 39777
>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete sequence Length = 128294 Score = 394 bits (199), Expect = e-106 Identities = 571/695 (82%) Strand = Plus / Minus Query: 603 agactagcagggctcctcctatttctctacctgctagcgggcgtcgtcgtcttttacctt 662 ||||||| ||| || ||||| ||| |||| || |||| ||||||| | | |||||| | Sbjct: 32251 agactagtaggacttctcctttttatctatcttctagtgggcgtcctggccttttatgct 32192 Query: 663 gtcatggatcagttatctggcaagagaaccaacagggtgcttgacgccctgtacttctgc 722 ||||||||| || |||| |||||| |||| || || |||||||||||| |||||||||| Sbjct: 32191 gtcatggatgagatatcaggcaagcgaacaaatagagtgcttgacgccttgtacttctgt 32132 Query: 723 attgtcacgatgacatcggttggttacggagaccttgtccctaacagcgacacggcaaag 782 ||||||| ||||| | || || || |||||||| ||||| |||| ||||| |||| Sbjct: 32131 gttgtcacaatgaccaccgtcggctatggagacctcgtcccaaacaatgacacaacaaaa 32072 Query: 783 ctgctcgcttgtgtgttcgtcttcacaggcatggcgattattgctctctttgtgagcaag 842 ||||| ||||||| |||||||||| || ||||| || ||||||||||||| ||||| Sbjct: 32071 ctgcttgcttgtgctttcgtcttcatgggtatggcagttgttgctctctttgtcagcaaa 32012 Query: 843 tcggcggattatctcgtggagaagcaggaggtgctgttcttcaaggcactgcacatgaac 902 || |||||||| || |||||||||||||||||||||||||| ||| |||||| ||| Sbjct: 32011 gtagcagattatcttgttgagaagcaggaggtgctgttcttcaaagcattgcacacgaat 31952 Query: 903 atgaagtgtagcgaggccaaaatgctcaggcaaattgagacaaacaagacaaagtacaaa 962 ||||| || | ||| |||| ||||| || ||| |||||||||| || |||||||||| Sbjct: 31951 ctgaagggtggtgagaccaagatgcttagagcaatcgagacaaacaggataaagtacaaa 31892 Query: 963 ttctacacggctgccctgcttcttatgacaaccattgttgtagggactatttttctctgg 1022 || ||||| ||| |||||||| || | ||||| || ||||| | ||||| ||| Sbjct: 31891 ttttacacaaatgcactgcttctggtgctatccattatttctgggaccgtatttctgtgg 31832 Query: 1023 aaggttgaaaagctgagccttgtcgattccttttattgtgtctgtgccacaataactacc 1082 || || || || ||||| ||||| |||||||| || ||||| ||||||||||| |||||| Sbjct: 31831 aaagtggagaaactgagtcttgttgattccttctactgtgtatgtgccacaatcactacc 31772 Query: 1083 ctgggctatggggataaaagcttctcgtccaaattggggcgcactttcgcggtattttgg 1142 ||||| |||||||||||||||||||| |||||| |||| || ||||||||| |||||| Sbjct: 31771 ctgggttatggggataaaagcttctcatccaaactgggacgtgttttcgcggtcttttgg 31712 Query: 1143 ataattacgagcaccataatcctggcgctgttcttcatgtaccttgctgagatctacacc 1202 || || |||||||| || ||| |||| | |||||||||||||||||||||||||||||| Sbjct: 31711 attatcacgagcactatcatcatggcacaattcttcatgtaccttgctgagatctacacc 31652 Query: 1203 gagcgacggcagaaaatgctggccaaatgggttctcacacggagaataacaaacatggat 1262 |||||||||||||||||||||||||| |||||||||||||||| ||| ||||| |||||| Sbjct: 31651 gagcgacggcagaaaatgctggccaattgggttctcacacggaaaatgacaaagatggat 31592 Query: 1263 cttgaagcagctgatctggataatgatcgaaaagt 1297 ||||| ||||| ||||||||| |||||||| |||| Sbjct: 31591 cttgaggcagccgatctggatgatgatcgacaagt 31557 Score = 117 bits (59), Expect = 1e-22 Identities = 131/155 (84%) Strand = Plus / Minus Query: 1300 gtgctgctgaatttgtcgtgtacaagctcaaagaactggggaagatcagccaagaagaca 1359 ||||||| |||||||| ||||||||||||||||||||||| ||||||| |||||| || | Sbjct: 31468 gtgctgcagaatttgttgtgtacaagctcaaagaactgggtaagatcaaccaagaggaga 31409 Query: 1360 tatcttgtttcctagaggagtttgagaaactcgatgttgaccagtccggcacactctcca 1419 | |||| ||| || ||||||||||| || |||||||| ||||| || ||||| |||||| Sbjct: 31408 tttcttcttttctggaggagtttgaaaagctcgatgtcgaccactctggcactctctccc 31349 Query: 1420 cctatgaccttactcaggcacaatccggtcagtga 1454 | |||||||| || | |||||||| | ||||||| Sbjct: 31348 catatgacctgaccctagcacaatctgctcagtga 31314
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 394 bits (199), Expect = e-106 Identities = 571/695 (82%) Strand = Plus / Minus Query: 603 agactagcagggctcctcctatttctctacctgctagcgggcgtcgtcgtcttttacctt 662 ||||||| ||| || ||||| ||| |||| || |||| ||||||| | | |||||| | Sbjct: 30814974 agactagtaggacttctcctttttatctatcttctagtgggcgtcctggccttttatgct 30814915 Query: 663 gtcatggatcagttatctggcaagagaaccaacagggtgcttgacgccctgtacttctgc 722 ||||||||| || |||| |||||| |||| || || |||||||||||| |||||||||| Sbjct: 30814914 gtcatggatgagatatcaggcaagcgaacaaatagagtgcttgacgccttgtacttctgt 30814855 Query: 723 attgtcacgatgacatcggttggttacggagaccttgtccctaacagcgacacggcaaag 782 ||||||| ||||| | || || || |||||||| ||||| |||| ||||| |||| Sbjct: 30814854 gttgtcacaatgaccaccgtcggctatggagacctcgtcccaaacaatgacacaacaaaa 30814795 Query: 783 ctgctcgcttgtgtgttcgtcttcacaggcatggcgattattgctctctttgtgagcaag 842 ||||| ||||||| |||||||||| || ||||| || ||||||||||||| ||||| Sbjct: 30814794 ctgcttgcttgtgctttcgtcttcatgggtatggcagttgttgctctctttgtcagcaaa 30814735 Query: 843 tcggcggattatctcgtggagaagcaggaggtgctgttcttcaaggcactgcacatgaac 902 || |||||||| || |||||||||||||||||||||||||| ||| |||||| ||| Sbjct: 30814734 gtagcagattatcttgttgagaagcaggaggtgctgttcttcaaagcattgcacacgaat 30814675 Query: 903 atgaagtgtagcgaggccaaaatgctcaggcaaattgagacaaacaagacaaagtacaaa 962 ||||| || | ||| |||| ||||| || ||| |||||||||| || |||||||||| Sbjct: 30814674 ctgaagggtggtgagaccaagatgcttagagcaatcgagacaaacaggataaagtacaaa 30814615 Query: 963 ttctacacggctgccctgcttcttatgacaaccattgttgtagggactatttttctctgg 1022 || ||||| ||| |||||||| || | ||||| || ||||| | ||||| ||| Sbjct: 30814614 ttttacacaaatgcactgcttctggtgctatccattatttctgggaccgtatttctgtgg 30814555 Query: 1023 aaggttgaaaagctgagccttgtcgattccttttattgtgtctgtgccacaataactacc 1082 || || || || ||||| ||||| |||||||| || ||||| ||||||||||| |||||| Sbjct: 30814554 aaagtggagaaactgagtcttgttgattccttctactgtgtatgtgccacaatcactacc 30814495 Query: 1083 ctgggctatggggataaaagcttctcgtccaaattggggcgcactttcgcggtattttgg 1142 ||||| |||||||||||||||||||| |||||| |||| || ||||||||| |||||| Sbjct: 30814494 ctgggttatggggataaaagcttctcatccaaactgggacgtgttttcgcggtcttttgg 30814435 Query: 1143 ataattacgagcaccataatcctggcgctgttcttcatgtaccttgctgagatctacacc 1202 || || |||||||| || ||| |||| | |||||||||||||||||||||||||||||| Sbjct: 30814434 attatcacgagcactatcatcatggcacaattcttcatgtaccttgctgagatctacacc 30814375 Query: 1203 gagcgacggcagaaaatgctggccaaatgggttctcacacggagaataacaaacatggat 1262 |||||||||||||||||||||||||| |||||||||||||||| ||| ||||| |||||| Sbjct: 30814374 gagcgacggcagaaaatgctggccaattgggttctcacacggaaaatgacaaagatggat 30814315 Query: 1263 cttgaagcagctgatctggataatgatcgaaaagt 1297 ||||| ||||| ||||||||| |||||||| |||| Sbjct: 30814314 cttgaggcagccgatctggatgatgatcgacaagt 30814280 Score = 117 bits (59), Expect = 1e-22 Identities = 131/155 (84%) Strand = Plus / Minus Query: 1300 gtgctgctgaatttgtcgtgtacaagctcaaagaactggggaagatcagccaagaagaca 1359 ||||||| |||||||| ||||||||||||||||||||||| ||||||| |||||| || | Sbjct: 30814191 gtgctgcagaatttgttgtgtacaagctcaaagaactgggtaagatcaaccaagaggaga 30814132 Query: 1360 tatcttgtttcctagaggagtttgagaaactcgatgttgaccagtccggcacactctcca 1419 | |||| ||| || ||||||||||| || |||||||| ||||| || ||||| |||||| Sbjct: 30814131 tttcttcttttctggaggagtttgaaaagctcgatgtcgaccactctggcactctctccc 30814072 Query: 1420 cctatgaccttactcaggcacaatccggtcagtga 1454 | |||||||| || | |||||||| | ||||||| Sbjct: 30814071 catatgacctgaccctagcacaatctgctcagtga 30814037
>emb|CT832713.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN049G05, full insert sequence Length = 542 Score = 317 bits (160), Expect = 7e-83 Identities = 286/328 (87%) Strand = Plus / Plus Query: 1127 tttcgcggtattttggataattacgagcaccataatcctggcgctgttcttcatgtacct 1186 ||||||||| |||||||| || |||||||| || ||| |||| | |||||||||||||| Sbjct: 2 tttcgcggtcttttggattatcacgagcactatcatcatggcacaattcttcatgtacct 61 Query: 1187 tgctgagatctacaccgagcgacggcagaaaatgctggccaaatgggttctcacacggag 1246 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 62 tgctgagatctacaccgagcgacggcagaaaatgctggccaattgggttctcacacggaa 121 Query: 1247 aataacaaacatggatcttgaagcagctgatctggataatgatcgaaaagtgggtgctgc 1306 ||| ||||| ||||||||||| ||||| ||||||||| |||||||| |||| |||||||| Sbjct: 122 aatgacaaagatggatcttgaggcagccgatctggatgatgatcgacaagttggtgctgc 181 Query: 1307 tgaatttgtcgtgtacaagctcaaagaactggggaagatcagccaagaagacatatcttg 1366 |||||||| ||||||||||||||||||||||| ||||||| |||||| || || |||| Sbjct: 182 agaatttgttgtgtacaagctcaaagaactgggtaagatcaaccaagaggagatttcttc 241 Query: 1367 tttcctagaggagtttgagaaactcgatgttgaccagtccggcacactctccacctatga 1426 ||| || ||||||||||| || |||||||| ||||| || ||||| |||||| | ||||| Sbjct: 242 ttttctggaggagtttgaaaagctcgatgtcgaccactctggcactctctccccatatga 301 Query: 1427 ccttactcaggcacaatccggtcagtga 1454 ||| || | |||||||| | ||||||| Sbjct: 302 cctgaccctagcacaatctgctcagtga 329
>gb|AC122165.40| Medicago truncatula clone mth2-32m22, complete sequence Length = 148588 Score = 48.1 bits (24), Expect = 0.11 Identities = 48/56 (85%) Strand = Plus / Plus Query: 1302 gctgctgaatttgtcgtgtacaagctcaaagaactggggaagatcagccaagaaga 1357 |||||||||||||| | || ||||||||||| |||||||||| || |||||||| Sbjct: 57116 gctgctgaatttgttatttataagctcaaagagatggggaagattagtcaagaaga 57171
>gb|AC068775.52| Homo sapiens 12 BAC RP11-291B21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161001 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1048 attccttttattgtgtctgtgcca 1071 |||||||||||||||||||||||| Sbjct: 59305 attccttttattgtgtctgtgcca 59328
>ref|NM_001065254.1| Oryza sativa (japonica cultivar-group) Os07g0108800 (Os07g0108800) mRNA, complete cds Length = 1468 Score = 44.1 bits (22), Expect = 1.7 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1318 tgtacaagctcaaagaactggggaagatcagccaagaagacatatc 1363 ||||||||||||| || || || ||||||||||| || |||||||| Sbjct: 1023 tgtacaagctcaaggagctcggcaagatcagccaggaggacatatc 1068
>dbj|AK229302.1| Arabidopsis thaliana mRNA for outward rectifying potassium channel KCO, complete cds, clone: RAFL16-57-C09 Length = 1435 Score = 44.1 bits (22), Expect = 1.7 Identities = 34/38 (89%) Strand = Plus / Plus Query: 729 acgatgacatcggttggttacggagaccttgtccctaa 766 ||||||||| | ||||| ||||| |||||||||||||| Sbjct: 463 acgatgacaactgttggatacggtgaccttgtccctaa 500 Score = 42.1 bits (21), Expect = 6.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1227 aaatgggttctcacacggagaataacaaacatggatcttgaagcagctgatct 1279 ||||||||| | || || ||||| ||||||| ||||| |||||||||||||| Sbjct: 961 aaatgggttttaacgcgaagaatcacaaacaatgatctcgaagcagctgatct 1013
>ref|NM_180865.1| Arabidopsis thaliana KCO1; calcium-activated potassium channel/ outward rectifier potassium channel (KCO1) mRNA, complete cds Length = 1635 Score = 44.1 bits (22), Expect = 1.7 Identities = 34/38 (89%) Strand = Plus / Plus Query: 729 acgatgacatcggttggttacggagaccttgtccctaa 766 ||||||||| | ||||| ||||| |||||||||||||| Sbjct: 673 acgatgacaactgttggatacggtgaccttgtccctaa 710 Score = 42.1 bits (21), Expect = 6.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1227 aaatgggttctcacacggagaataacaaacatggatcttgaagcagctgatct 1279 ||||||||| | || || ||||| ||||||| ||||| |||||||||||||| Sbjct: 1171 aaatgggttttaacgcgaagaatcacaaacaatgatctcgaagcagctgatct 1223
>ref|NM_124945.3| Arabidopsis thaliana KCO1; calcium-activated potassium channel/ outward rectifier potassium channel (KCO1) mRNA, complete cds Length = 1427 Score = 44.1 bits (22), Expect = 1.7 Identities = 34/38 (89%) Strand = Plus / Plus Query: 729 acgatgacatcggttggttacggagaccttgtccctaa 766 ||||||||| | ||||| ||||| |||||||||||||| Sbjct: 465 acgatgacaactgttggatacggtgaccttgtccctaa 502 Score = 42.1 bits (21), Expect = 6.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1227 aaatgggttctcacacggagaataacaaacatggatcttgaagcagctgatct 1279 ||||||||| | || || ||||| ||||||| ||||| |||||||||||||| Sbjct: 963 aaatgggttttaacgcgaagaatcacaaacaatgatctcgaagcagctgatct 1015
>gb|AC122827.3| Mus musculus BAC clone RP23-211N23 from chromosome 18, complete sequence Length = 194843 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1616 gacatgtgtaagaaagaggtat 1637 |||||||||||||||||||||| Sbjct: 33121 gacatgtgtaagaaagaggtat 33100
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 1.7 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1318 tgtacaagctcaaagaactggggaagatcagccaagaagacatatc 1363 ||||||||||||| || || || ||||||||||| || |||||||| Sbjct: 467308 tgtacaagctcaaggagctcggcaagatcagccaggaggacatatc 467353
>gb|AY087147.1| Arabidopsis thaliana clone 32253 mRNA, complete sequence Length = 1624 Score = 44.1 bits (22), Expect = 1.7 Identities = 34/38 (89%) Strand = Plus / Plus Query: 729 acgatgacatcggttggttacggagaccttgtccctaa 766 ||||||||| | ||||| ||||| |||||||||||||| Sbjct: 673 acgatgacaactgttggatacggtgaccttgtccctaa 710 Score = 42.1 bits (21), Expect = 6.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1227 aaatgggttctcacacggagaataacaaacatggatcttgaagcagctgatct 1279 ||||||||| | || || ||||| ||||||| ||||| |||||||||||||| Sbjct: 1171 aaatgggttttaacgcgaagaatcacaaacaatgatctcgaagcagctgatct 1223
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 44.1 bits (22), Expect = 1.7 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1318 tgtacaagctcaaagaactggggaagatcagccaagaagacatatc 1363 ||||||||||||| || || || ||||||||||| || |||||||| Sbjct: 69472 tgtacaagctcaaggagctcggcaagatcagccaggaggacatatc 69517
>dbj|AB009050.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDF20 Length = 86699 Score = 44.1 bits (22), Expect = 1.7 Identities = 34/38 (89%) Strand = Plus / Plus Query: 729 acgatgacatcggttggttacggagaccttgtccctaa 766 ||||||||| | ||||| ||||| |||||||||||||| Sbjct: 23654 acgatgacaactgttggatacggtgaccttgtccctaa 23691 Score = 42.1 bits (21), Expect = 6.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1227 aaatgggttctcacacggagaataacaaacatggatcttgaagcagctgatct 1279 ||||||||| | || || ||||| ||||||| ||||| |||||||||||||| Sbjct: 24152 aaatgggttttaacgcgaagaatcacaaacaatgatctcgaagcagctgatct 24204
>dbj|AK109604.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-F01, full insert sequence Length = 1468 Score = 44.1 bits (22), Expect = 1.7 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1318 tgtacaagctcaaagaactggggaagatcagccaagaagacatatc 1363 ||||||||||||| || || || ||||||||||| || |||||||| Sbjct: 1023 tgtacaagctcaaggagctcggcaagatcagccaggaggacatatc 1068
>emb|BX832754.1|CNS09ZRK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH95ZG06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1517 Score = 44.1 bits (22), Expect = 1.7 Identities = 34/38 (89%) Strand = Plus / Plus Query: 729 acgatgacatcggttggttacggagaccttgtccctaa 766 ||||||||| | ||||| ||||| |||||||||||||| Sbjct: 628 acgatgacaactgttggatacggtgaccttgtccctaa 665
>emb|BX832523.1|CNS09YN2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH78ZG02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1337 Score = 44.1 bits (22), Expect = 1.7 Identities = 34/38 (89%) Strand = Plus / Plus Query: 729 acgatgacatcggttggttacggagaccttgtccctaa 766 ||||||||| | ||||| ||||| |||||||||||||| Sbjct: 417 acgatgacaactgttggatacggtgaccttgtccctaa 454 Score = 42.1 bits (21), Expect = 6.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1227 aaatgggttctcacacggagaataacaaacatggatcttgaagcagctgatct 1279 ||||||||| | || || ||||| ||||||| ||||| |||||||||||||| Sbjct: 915 aaatgggttttaacgcgaagaatcacaaacaatgatctcgaagcagctgatct 967
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 44.1 bits (22), Expect = 1.7 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1318 tgtacaagctcaaagaactggggaagatcagccaagaagacatatc 1363 ||||||||||||| || || || ||||||||||| || |||||||| Sbjct: 21220 tgtacaagctcaaggagctcggcaagatcagccaggaggacatatc 21265
>emb|AJ308597.1|STU308597 Solanum tuberosum kco1b gene for K+ channel protein Length = 1666 Score = 44.1 bits (22), Expect = 1.7 Identities = 52/62 (83%) Strand = Plus / Plus Query: 1302 gctgctgaatttgtcgtgtacaagctcaaagaactggggaagatcagccaagaagacata 1361 |||||||||||||| ||||| || || || || |||| |||||||||||||| ||| || Sbjct: 1506 gctgctgaatttgtggtgtataaacttaaggagatgggaaagatcagccaagacgacgta 1565 Query: 1362 tc 1363 || Sbjct: 1566 tc 1567
>emb|Y07825.1|ATKCO1 A.thaliana kco1 gene Length = 2851 Score = 44.1 bits (22), Expect = 1.7 Identities = 34/38 (89%) Strand = Plus / Plus Query: 729 acgatgacatcggttggttacggagaccttgtccctaa 766 ||||||||| | ||||| ||||| |||||||||||||| Sbjct: 1579 acgatgacaactgttggatacggtgaccttgtccctaa 1616 Score = 42.1 bits (21), Expect = 6.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1227 aaatgggttctcacacggagaataacaaacatggatcttgaagcagctgatct 1279 ||||||||| | || || ||||| ||||||| ||||| |||||||||||||| Sbjct: 2077 aaatgggttttaacgcgaagaatcacaaacaatgatctcgaagcagctgatct 2129
>emb|AJ224926.1|STA224926 Solanum tuberosum mRNA for K+ channel protein (kco1b gene) Length = 1659 Score = 44.1 bits (22), Expect = 1.7 Identities = 52/62 (83%) Strand = Plus / Plus Query: 1302 gctgctgaatttgtcgtgtacaagctcaaagaactggggaagatcagccaagaagacata 1361 |||||||||||||| ||||| || || || || |||| |||||||||||||| ||| || Sbjct: 1032 gctgctgaatttgtggtgtataaacttaaggagatgggaaagatcagccaagacgacgta 1091 Query: 1362 tc 1363 || Sbjct: 1092 tc 1093
>emb|X97323.1|ATORPC A.thaliana mRNA for outward rectifying potassium channel KCO1 Length = 1340 Score = 44.1 bits (22), Expect = 1.7 Identities = 34/38 (89%) Strand = Plus / Plus Query: 729 acgatgacatcggttggttacggagaccttgtccctaa 766 ||||||||| | ||||| ||||| |||||||||||||| Sbjct: 395 acgatgacaactgttggatacggtgaccttgtccctaa 432 Score = 42.1 bits (21), Expect = 6.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1227 aaatgggttctcacacggagaataacaaacatggatcttgaagcagctgatct 1279 ||||||||| | || || ||||| ||||||| ||||| |||||||||||||| Sbjct: 893 aaatgggttttaacgcgaagaatcacaaacaatgatctcgaagcagctgatct 945
>gb|AF099096.1|AF099096 Samanea saman pulvinus outward-rectifying channel for potassium SPOCK1 mRNA, complete cds Length = 1487 Score = 44.1 bits (22), Expect = 1.7 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1071 acaataactaccctgggctatggggataaaagcttctc 1108 |||||||| || ||||| ||||| |||||||||||||| Sbjct: 739 acaataacaactctgggttatggtgataaaagcttctc 776
>gb|CP000481.1| Acidothermus cellulolyticus 11B, complete genome Length = 2443540 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 gcccagcttccgtcggccgga 363 ||||||||||||||||||||| Sbjct: 1286110 gcccagcttccgtcggccgga 1286130
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 532 atcagaaaccagaagaaaacg 552 ||||||||||||||||||||| Sbjct: 8804341 atcagaaaccagaagaaaacg 8804361
>gb|AC188093.1| Pongo pygmaeus abelii chromosome UNK clone CH276-104H12, complete sequence Length = 206635 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1250 aacaaacatggatcttgaagc 1270 ||||||||||||||||||||| Sbjct: 3575 aacaaacatggatcttgaagc 3595
>gb|AC102361.13| Mus musculus chromosome 18, clone RP23-37I2, complete sequence Length = 213628 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1258 tggatcttgaagcagctgatc 1278 ||||||||||||||||||||| Sbjct: 117671 tggatcttgaagcagctgatc 117651
>gb|AC098799.2| Homo sapiens BAC clone RP11-642E20 from 4, complete sequence Length = 160712 Score = 42.1 bits (21), Expect = 6.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1667 tgtgtaaatgaaatttgttaagcta 1691 ||||| ||||||||||||||||||| Sbjct: 30335 tgtgttaatgaaatttgttaagcta 30311
>gb|AC087482.9| Homo sapiens chromosome 15, clone RP11-540N15, complete sequence Length = 194546 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1250 aacaaacatggatcttgaagc 1270 ||||||||||||||||||||| Sbjct: 21880 aacaaacatggatcttgaagc 21860
>gb|AC093334.4| Homo sapiens chromosome 15, clone RP11-798K3, complete sequence Length = 220807 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1250 aacaaacatggatcttgaagc 1270 ||||||||||||||||||||| Sbjct: 92908 aacaaacatggatcttgaagc 92928
>gb|AC021802.6| Homo sapiens, clone RP11-28C3, complete sequence Length = 140334 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1250 aacaaacatggatcttgaagc 1270 ||||||||||||||||||||| Sbjct: 99563 aacaaacatggatcttgaagc 99583
>emb|AL138773.5| Human DNA sequence from clone RP4-660B20 on chromosome 10 Contains a novel gene and a CpG island, complete sequence Length = 125661 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1674 atgaaatttgttaagctattg 1694 ||||||||||||||||||||| Sbjct: 16540 atgaaatttgttaagctattg 16560
>gb|AC093045.1| Drosophila melanogaster, chromosome 2L, region 29E-29E, BAC clone BACR01O16, complete sequence Length = 189904 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 532 atcagaaaccagaagaaaacg 552 ||||||||||||||||||||| Sbjct: 45117 atcagaaaccagaagaaaacg 45137
>emb|BX830855.1|CNS09ZF3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS31ZC03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1367 Score = 42.1 bits (21), Expect = 6.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1227 aaatgggttctcacacggagaataacaaacatggatcttgaagcagctgatct 1279 ||||||||| | || || ||||| ||||||| ||||| |||||||||||||| Sbjct: 962 aaatgggttttaacgcgaagaatcacaaacaatgatctcgaagcagctgatct 1014
>emb|BX511240.5| Zebrafish DNA sequence from clone CH211-113H10, complete sequence Length = 175187 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 938 tgagacaaacaagacaaagta 958 ||||||||||||||||||||| Sbjct: 73799 tgagacaaacaagacaaagta 73819
>gb|AC004725.1|AC004725 Drosophila melanogaster, chromosome 2L, region 29F2-29F3, P1 clone DS08760, complete sequence Length = 49649 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 532 atcagaaaccagaagaaaacg 552 ||||||||||||||||||||| Sbjct: 43798 atcagaaaccagaagaaaacg 43818 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 285,112,574 Number of extensions: 14436126 Number of successful extensions: 262140 Number of sequences better than 10.0: 42 Number of HSP's gapped: 262134 Number of HSP's successfully gapped: 64 Length of query: 1738 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1715 Effective length of database: 18,503,978,556 Effective search space: 31734323223540 Effective search space used: 31734323223540 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
