>Q2FLQ6:Y543_METHJ UPF0316 protein Mhun_0543 - Methanospirillum hungatei (strain JF-1|
           / DSM 864)
          Length = 200
 Score = 33.9 bits (76), Expect = 0.99
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
 Frame = +2

Query: 722 YTFGAVHVPLFAHRICELGACRIRYVGVLSRLAQFC-----FSVLSRWVLCLGSVVLCFA 886
           +TFG + V +F  RIC++    IRY+ ++SR  +F      F  ++ W+L +G V+    
Sbjct: 11  FTFGLIPVLIFLARICDVSIGTIRYI-MISRGFKFIAPVFGFFEVTIWLLAIGQVMANIT 69

Query: 887 TENC 898
              C
Sbjct: 70  NPIC 73

>P29466:CASP1_HUMAN Caspase-1 precursor - Homo sapiens (Human)|
          Length = 404

 Score = 33.9 bits (76), Expect = 0.99
 Identities = 27/93 (29%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
 Frame = -2

Query: 429 TDEEKETTKCFKKHCQSD-----DSLDINVWHSHPNAGRRLLHKEVELWLQRLCCWASIG 265
           T EE E     K H + D      S   NV   HP  G   + + +E  +Q   C   + 
Sbjct: 309 TTEEFEDDAIKKAHIEKDFIAFCSSTPDNVSWRHPTMGSVFIGRLIE-HMQEYACSCDVE 367

Query: 264 PKFTELLVGGEEEDGREQHPPDEGDEAHRCWPL 166
             F ++    E+ DGR Q P  E     RC+ L
Sbjct: 368 EIFRKVRFSFEQPDGRAQMPTTERVTLTRCFYL 400

>Q04779:RCO1_YEAST Transcriptional regulatory protein RCO1 - Saccharomyces cerevisiae|
           (Baker's yeast)
          Length = 684

 Score = 30.8 bits (68), Expect = 8.4
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
 Frame = -2

Query: 408 TKCFKK--HCQSDDSLDINVWHSHPNAGRRLLHKEVELWLQRL 286
           TK +KK  HCQ D+S++  VW       +RL++K+ +L+ + L
Sbjct: 472 TKVYKKIHHCQEDNSVNYKVWKK-----QRLINKKNQLYYEPL 509


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 130,346,733
Number of extensions: 2549116
Number of successful extensions: 7039
Number of sequences better than 10.0: 3
Number of HSP's gapped: 7039
Number of HSP's successfully gapped: 3
Length of query: 316
Length of database: 100,686,439
Length adjustment: 113
Effective length of query: 203
Effective length of database: 69,691,104
Effective search space: 14147294112
Effective search space used: 14147294112
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)