ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf86k05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK104076.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-C08, full insert sequence Length = 1325 Score = 1221 bits (616), Expect = 0.0 Identities = 844/920 (91%) Strand = Plus / Plus Query: 124 ggagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggt 183 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 138 ggagatggacgtggtgaaggcggcgcagctctcggggcggacgctggagaaggtggtggt 197 Query: 184 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 257 Query: 244 gaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaa 303 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 258 caagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaa 317 Query: 304 ctcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgacca 363 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 318 ctcctacgccgtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatca 377 Query: 364 taattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggagcatgttgt 423 ||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 378 taattaccacgaatcgatgttttccatgttcaagaggatcaacgccaaggagcatgttgt 437 Query: 424 tggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcatgcattgtt 483 ||||||||||||||| ||||||||||| | |||||||||||||||| | || ||| | || Sbjct: 438 tggctggtacagcaccggtccaaaactcagggagaacgacttggatatacacgcactatt 497 Query: 484 taccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaaggagttggg 543 | |||||||||||||| ||||| ||||||||||| |||||||||||||||||||| || Sbjct: 498 caataactatgttcctaaccctgtcctggtgattattgatgttcaacccaaggagttagg 557 Query: 544 aatacccaccaaagcatattatgctgttgaagaggttaaagagaatgctactcagaaaag 603 |||||||||||||||||| |||||||| || ||||||||||||||||||||||| ||||| Sbjct: 558 aatacccaccaaagcatactatgctgtggaggaggttaaagagaatgctactcaaaaaag 617 Query: 604 tcaaaaggtgttcgtccacgtgccatcagaaattgctgctcatgaagttgaggaaatcgg 663 |||||||||||| || || || || |||||||| ||||| || || |||||||||||||| Sbjct: 618 tcaaaaggtgtttgttcatgttccttcagaaatagctgcccacgaggttgaggaaatcgg 677 Query: 664 agttgagcaccttctgagggatgtgaaagacacaacaataagcacacttgcaacagaggt 723 ||||||||| |||||||||||||| || ||||||||||||||||| ||||| |||||||| Sbjct: 678 agttgagcatcttctgagggatgtcaaggacacaacaataagcacgcttgcgacagaggt 737 Query: 724 cagcagcaagcttgctgccctgaagggacttgatgcgaggcttacggagatccggggtta 783 | |||||||||||| ||| |||| ||||| || || ||||| | ||||||||| || || Sbjct: 738 aaccagcaagcttgcagccttgaaaggactggacgcaaggctcagggagatccgtgggta 797 Query: 784 tctagatcttgtaattgaagggaagctcccactgaaccacgagattttgtaccacttgca 843 |||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 798 cttagatcttgtaattgaagggaagctcccactgaatcatgagattttgtaccacttgca 857 Query: 844 ggatgtgtttaatctgctccccaatctcaacgtaaatgagctcattaaagcctttgcagt 903 |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 858 ggatgtgtttaatctgctccccaatctcaatgtaaacgagcttattaaagcctttgcagt 917 Query: 904 gaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgtcatcgc 963 |||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 918 taaaacaaacgatatgatgttggtcatatacttgtcttctcttatccggagtgtcatcgc 977 Query: 964 tctccacaatttgatcaacaacaagatgctaaacaaggagcatgagaaggccgaggattc 1023 ||||| || |||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 978 actccataacttgatcaataacaagatgctaaacaaggagcatgagaaagccgaggattc 1037 Query: 1024 gaagccagccgccataccta 1043 ||||||| |||||||||||| Sbjct: 1038 gaagccaaccgccataccta 1057 Score = 52.0 bits (26), Expect = 0.005 Identities = 58/66 (87%), Gaps = 2/66 (3%) Strand = Plus / Plus Query: 1174 tttacacttt-gatgtttacttcatgtgcgacgaggtcaacgacaaaaccttacattctg 1232 |||||||||| |||||||| ||||||| ||| ||||||||| |||| | |||||||||| Sbjct: 1174 tttacactttcgatgtttatttcatgtacgataaggtcaacggcaaa-ctttacattctg 1232 Query: 1233 tgagct 1238 |||||| Sbjct: 1233 tgagct 1238
>dbj|AK242618.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090017I19, full insert sequence Length = 5304 Score = 1213 bits (612), Expect = 0.0 Identities = 843/920 (91%) Strand = Plus / Plus Query: 124 ggagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggt 183 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 163 ggagatggacgtggtgaaggcggcgcagctctcggggcggacgctggagaaggtggtggt 222 Query: 184 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 282 Query: 244 gaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaa 303 ||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 283 caagcgcgccgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaa 342 Query: 304 ctcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgacca 363 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 343 ctcctacgccgtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatca 402 Query: 364 taattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggagcatgttgt 423 ||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 403 taattaccacgaatcgatgttttccatgttcaagaggatcaacgccaaggagcatgttgt 462 Query: 424 tggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcatgcattgtt 483 ||||||||||||||| ||||||||||| | |||||||||||||||| | || ||| | || Sbjct: 463 tggctggtacagcaccggtccaaaactcagggagaacgacttggatatacacgcactatt 522 Query: 484 taccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaaggagttggg 543 | |||||||||||||| ||||| ||||||||||| |||||||||||||||||||| || Sbjct: 523 caataactatgttcctaaccctgtcctggtgattattgatgttcaacccaaggagttagg 582 Query: 544 aatacccaccaaagcatattatgctgttgaagaggttaaagagaatgctactcagaaaag 603 |||||||||||||||||| |||||||| || ||||||||||||||||||||||| ||||| Sbjct: 583 aatacccaccaaagcatactatgctgtggaggaggttaaagagaatgctactcaaaaaag 642 Query: 604 tcaaaaggtgttcgtccacgtgccatcagaaattgctgctcatgaagttgaggaaatcgg 663 |||||||||||| || || || || |||||||| ||||| || || |||||||||||||| Sbjct: 643 tcaaaaggtgtttgttcatgttccttcagaaatagctgcccacgaggttgaggaaatcgg 702 Query: 664 agttgagcaccttctgagggatgtgaaagacacaacaataagcacacttgcaacagaggt 723 ||||||||| |||||||||||||| || ||||||||||||||||| ||||| |||||||| Sbjct: 703 agttgagcatcttctgagggatgtcaaggacacaacaataagcacgcttgcgacagaggt 762 Query: 724 cagcagcaagcttgctgccctgaagggacttgatgcgaggcttacggagatccggggtta 783 | |||||||||||| ||| |||| ||||| || || ||||| | ||||||||| || || Sbjct: 763 aaccagcaagcttgcagccttgaaaggactggacgcaaggctcagggagatccgtgggta 822 Query: 784 tctagatcttgtaattgaagggaagctcccactgaaccacgagattttgtaccacttgca 843 |||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 823 cttagatcttgtaattgaagggaagctcccactgaatcatgagattttgtaccacttgca 882 Query: 844 ggatgtgtttaatctgctccccaatctcaacgtaaatgagctcattaaagcctttgcagt 903 |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 883 ggatgtgtttaatctgctccccaatctcaatgtaaacgagcttattaaagcctttgcagt 942 Query: 904 gaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgtcatcgc 963 |||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 943 taaaacaaacgatatgatgttggtcatatacttgtcttctcttatccggagtgtcatcgc 1002 Query: 964 tctccacaatttgatcaacaacaagatgctaaacaaggagcatgagaaggccgaggattc 1023 ||||| || |||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1003 actccataacttgatcaataacaagatgctaaacaaggagcatgagaaagccgaggattc 1062 Query: 1024 gaagccagccgccataccta 1043 ||||||| |||||||||||| Sbjct: 1063 gaagccaaccgccataccta 1082 Score = 52.0 bits (26), Expect = 0.005 Identities = 58/66 (87%), Gaps = 2/66 (3%) Strand = Plus / Plus Query: 1174 tttacacttt-gatgtttacttcatgtgcgacgaggtcaacgacaaaaccttacattctg 1232 |||||||||| |||||||| ||||||| ||| ||||||||| |||| | |||||||||| Sbjct: 1199 tttacactttcgatgtttatttcatgtacgataaggtcaacggcaaa-ctttacattctg 1257 Query: 1233 tgagct 1238 |||||| Sbjct: 1258 tgagct 1263
>dbj|AK103551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132F12, full insert sequence Length = 1431 Score = 1213 bits (612), Expect = 0.0 Identities = 843/920 (91%) Strand = Plus / Plus Query: 124 ggagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggt 183 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 211 ggagatggacgtggtgaaggcggcgcagctctcggggcggacgctggagaaggtggtggt 270 Query: 184 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 271 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 330 Query: 244 gaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaa 303 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 331 caagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaa 390 Query: 304 ctcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgacca 363 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 391 ctcctacgccgtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatca 450 Query: 364 taattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggagcatgttgt 423 ||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 451 taattaccacgaatcgatgttttccatgttcaagaggatcaacgccaaggagcatgttgt 510 Query: 424 tggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcatgcattgtt 483 ||||||||||||||| ||||||||||| | |||||||||||||||| | || ||| | || Sbjct: 511 tggctggtacagcaccggtccaaaactcagggagaacgacttggatatacacgcactatt 570 Query: 484 taccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaaggagttggg 543 | |||||||||||||| ||||| ||||||||||| |||||||||||||||||||| || Sbjct: 571 caataactatgttcctaaccctgtcctggtgattattgatgttcaacccaaggagttagg 630 Query: 544 aatacccaccaaagcatattatgctgttgaagaggttaaagagaatgctactcagaaaag 603 |||||||||||||||||| ||||||| || ||||||||||||||||||||||| ||||| Sbjct: 631 aatacccaccaaagcatactatgctgcggaggaggttaaagagaatgctactcaaaaaag 690 Query: 604 tcaaaaggtgttcgtccacgtgccatcagaaattgctgctcatgaagttgaggaaatcgg 663 |||||||||||| || || || || |||||||| ||||| || || |||||||||||||| Sbjct: 691 tcaaaaggtgtttgttcatgttccttcagaaatagctgcccacgaggttgaggaaatcgg 750 Query: 664 agttgagcaccttctgagggatgtgaaagacacaacaataagcacacttgcaacagaggt 723 ||||||||| |||||||||||||| || ||||||||||||||||| ||||| |||||||| Sbjct: 751 agttgagcatcttctgagggatgtcaaggacacaacaataagcacgcttgcgacagaggt 810 Query: 724 cagcagcaagcttgctgccctgaagggacttgatgcgaggcttacggagatccggggtta 783 | |||||||||||| ||| |||| ||||| || || ||||| | ||||||||| || || Sbjct: 811 aaccagcaagcttgcagccttgaaaggactggacgcaaggctcagggagatccgtgggta 870 Query: 784 tctagatcttgtaattgaagggaagctcccactgaaccacgagattttgtaccacttgca 843 |||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 871 cttagatcttgtaattgaagggaagctcccactgaatcatgagattttgtaccacttgca 930 Query: 844 ggatgtgtttaatctgctccccaatctcaacgtaaatgagctcattaaagcctttgcagt 903 |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 931 ggatgtgtttaatctgctccccaatctcaatgtaaacgagcttattaaagcctttgcagt 990 Query: 904 gaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgtcatcgc 963 |||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 991 taaaacaaacgatatgatgttggtcatatacttgtcttctcttatccggagtgtcatcgc 1050 Query: 964 tctccacaatttgatcaacaacaagatgctaaacaaggagcatgagaaggccgaggattc 1023 ||||| || |||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1051 actccataacttgatcaataacaagatgctaaacaaggagcatgagaaagccgaggattc 1110 Query: 1024 gaagccagccgccataccta 1043 ||||||| |||||||||||| Sbjct: 1111 gaagccaaccgccataccta 1130 Score = 52.0 bits (26), Expect = 0.005 Identities = 58/66 (87%), Gaps = 2/66 (3%) Strand = Plus / Plus Query: 1174 tttacacttt-gatgtttacttcatgtgcgacgaggtcaacgacaaaaccttacattctg 1232 |||||||||| |||||||| ||||||| ||| ||||||||| |||| | |||||||||| Sbjct: 1247 tttacactttcgatgtttatttcatgtacgataaggtcaacggcaaa-ctttacattctg 1305 Query: 1233 tgagct 1238 |||||| Sbjct: 1306 tgagct 1311
>dbj|AK061835.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-D07, full insert sequence Length = 1373 Score = 1207 bits (609), Expect = 0.0 Identities = 844/921 (91%), Gaps = 1/921 (0%) Strand = Plus / Plus Query: 124 ggagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggt 183 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 152 ggagatggacgtggtgaaggcggcgcagctctcggggcggacgctggagaaggtggtggt 211 Query: 184 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 271 Query: 244 gaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaa 303 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 272 caagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaa 331 Query: 304 ctcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgacca 363 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 332 ctcctacgccgtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatca 391 Query: 364 taattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggagcatgttgt 423 ||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 392 taattaccacgaatcgatgttttccatgttcaagaggatcaacgccaaggagcatgttgt 451 Query: 424 tggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcatgcattgtt 483 ||||||||||||||| ||||||||||| | |||||||||||||||| | || ||| | || Sbjct: 452 tggctggtacagcaccggtccaaaactcagggagaacgacttggatatacacgcactatt 511 Query: 484 taccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaaggagttggg 543 | |||||||||||||| ||||| ||||||||||| |||||||||||||||||||| || Sbjct: 512 caataactatgttcctaaccctgtcctggtgattattgatgttcaacccaaggagttagg 571 Query: 544 aatacccaccaaagcatattatgctgttgaagaggttaaagagaatgctactc-agaaaa 602 |||||||||||||||||| |||||||| || |||||||||||||||||||||| | |||| Sbjct: 572 aatacccaccaaagcatactatgctgtggaggaggttaaagagaatgctactcaaaaaaa 631 Query: 603 gtcaaaaggtgttcgtccacgtgccatcagaaattgctgctcatgaagttgaggaaatcg 662 ||||||||||||| || || || || |||||||| ||||| || || ||||||||||||| Sbjct: 632 gtcaaaaggtgtttgttcatgttccttcagaaatagctgcccacgaggttgaggaaatcg 691 Query: 663 gagttgagcaccttctgagggatgtgaaagacacaacaataagcacacttgcaacagagg 722 |||||||||| |||||||||||||| || ||||||||||||||||| ||||| ||||||| Sbjct: 692 gagttgagcatcttctgagggatgtcaaggacacaacaataagcacgcttgcgacagagg 751 Query: 723 tcagcagcaagcttgctgccctgaagggacttgatgcgaggcttacggagatccggggtt 782 | | |||||||||||| ||| |||| ||||| || || ||||| | ||||||||| || | Sbjct: 752 taaccagcaagcttgcagccttgaaaggactggacgcaaggctcagggagatccgtgggt 811 Query: 783 atctagatcttgtaattgaagggaagctcccactgaaccacgagattttgtaccacttgc 842 | |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 812 acttagatcttgtaattgaagggaagctcccactgaatcatgagattttgtaccacttgc 871 Query: 843 aggatgtgtttaatctgctccccaatctcaacgtaaatgagctcattaaagcctttgcag 902 ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||| Sbjct: 872 aggatgtgtttaatctgctccccaatctcaatgtaaacgagcttattaaagcctttgcag 931 Query: 903 tgaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgtcatcg 962 | |||||||| ||||||||| ||||||||||| ||||||| ||||||||||||||||||| Sbjct: 932 ttaaaacaaacgatatgatgttggtcatatacttgtcttctcttatccggagtgtcatcg 991 Query: 963 ctctccacaatttgatcaacaacaagatgctaaacaaggagcatgagaaggccgaggatt 1022 | ||||| || |||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 992 cactccataacttgatcaataacaagatgctaaacaaggagcatgagaaagccgaggatt 1051 Query: 1023 cgaagccagccgccataccta 1043 |||||||| |||||||||||| Sbjct: 1052 cgaagccaaccgccataccta 1072 Score = 52.0 bits (26), Expect = 0.005 Identities = 58/66 (87%), Gaps = 2/66 (3%) Strand = Plus / Plus Query: 1174 tttacacttt-gatgtttacttcatgtgcgacgaggtcaacgacaaaaccttacattctg 1232 |||||||||| |||||||| ||||||| ||| ||||||||| |||| | |||||||||| Sbjct: 1189 tttacactttcgatgtttatttcatgtacgataaggtcaacggcaaa-ctttacattctg 1247 Query: 1233 tgagct 1238 |||||| Sbjct: 1248 tgagct 1253
>dbj|AB037150.1| Oryza sativa (japonica cultivar-group) OsRPN8 mRNA for 26S proteasome regulatory particle non-ATPase subunit8, complete cds Length = 1308 Score = 1205 bits (608), Expect = 0.0 Identities = 842/920 (91%) Strand = Plus / Plus Query: 124 ggagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggt 183 ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 123 ggagatggacgtggtgaaggcggcgcacgtctcggggcggacgctggagaaggtggtggt 182 Query: 184 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 242 Query: 244 gaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaa 303 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 243 caagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaa 302 Query: 304 ctcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgacca 363 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 303 ctcctacgccgtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatca 362 Query: 364 taattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggagcatgttgt 423 ||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 363 taattaccacgaatcgatgttttccatgttcaagaggatcaacgccaaggagcatgttgt 422 Query: 424 tggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcatgcattgtt 483 ||||||||||||||| ||||||||||| | |||||||||||||||| | || ||| | || Sbjct: 423 tggctggtacagcaccggtccaaaactcagggagaacgacttggatatacacgcactatt 482 Query: 484 taccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaaggagttggg 543 | |||||||||||||| ||||| ||||||||||| |||||||||||||||||||| || Sbjct: 483 caataactatgttcctaaccctgtcctggtgattattgatgttcaacccaaggagttagg 542 Query: 544 aatacccaccaaagcatattatgctgttgaagaggttaaagagaatgctactcagaaaag 603 |||||||||||||||||| |||||||| || ||||||||||||||||||||||| ||||| Sbjct: 543 aatacccaccaaagcatactatgctgtggaggaggttaaagagaatgctactcaaaaaag 602 Query: 604 tcaaaaggtgttcgtccacgtgccatcagaaattgctgctcatgaagttgaggaaatcgg 663 |||||||||||| || || || || |||||||| ||||| || || |||||||||||||| Sbjct: 603 tcaaaaggtgtttgttcatgttccttcagaaatagctgcccacgaggttgaggaaatcgg 662 Query: 664 agttgagcaccttctgagggatgtgaaagacacaacaataagcacacttgcaacagaggt 723 ||||||||| |||||||||||||| || ||||||||||||||||| ||||| |||||||| Sbjct: 663 agttgagcatcttctgagggatgtcaaggacacaacaataagcacgcttgcgacagaggt 722 Query: 724 cagcagcaagcttgctgccctgaagggacttgatgcgaggcttacggagatccggggtta 783 | |||||||||||| ||| |||| ||||| || || ||||| | ||||||||| || || Sbjct: 723 aaccagcaagcttgcagccttgaaaggactggacgcaaggctcagggagatccgtgggta 782 Query: 784 tctagatcttgtaattgaagggaagctcccactgaaccacgagattttgtaccacttgca 843 |||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 783 cttagatcttgtaattgaagggaagctcccactgaatcatgagattttgtaccacttgca 842 Query: 844 ggatgtgtttaatctgctccccaatctcaacgtaaatgagctcattaaagcctttgcagt 903 |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 843 ggatgtgtttaatctgctccccaatctcaatgtaaacgagcttattaaagcctttgcagt 902 Query: 904 gaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgtcatcgc 963 |||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 903 taaaacaaacgatatgatgttggtcatatacttgtcttctcttatccggagtgtcatcgc 962 Query: 964 tctccacaatttgatcaacaacaagatgctaaacaaggagcatgagaaggccgaggattc 1023 ||||| || |||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 963 actccataacttgatcaataacaagatgctaaacaaggagcatgagaaagccgaggattc 1022 Query: 1024 gaagccagccgccataccta 1043 ||||||| |||||||||||| Sbjct: 1023 gaagccaaccgccataccta 1042 Score = 52.0 bits (26), Expect = 0.005 Identities = 58/66 (87%), Gaps = 2/66 (3%) Strand = Plus / Plus Query: 1174 tttacacttt-gatgtttacttcatgtgcgacgaggtcaacgacaaaaccttacattctg 1232 |||||||||| |||||||| ||||||| ||| ||||||||| |||| | |||||||||| Sbjct: 1159 tttacactttcgatgtttatttcatgtacgataaggtcaacggcaaa-ctttacattctg 1217 Query: 1233 tgagct 1238 |||||| Sbjct: 1218 tgagct 1223
>ref|NM_001060687.1| Oryza sativa (japonica cultivar-group) Os04g0661900 (Os04g0661900) mRNA, partial cds Length = 1435 Score = 1152 bits (581), Expect = 0.0 Identities = 844/925 (91%), Gaps = 5/925 (0%) Strand = Plus / Plus Query: 124 ggagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggt 183 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 210 ggagatggacgtggtgaaggcggcgcagctctcggggcggacgctggagaaggtggtggt 269 Query: 184 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 329 Query: 244 gaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaa 303 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 330 caagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaa 389 Query: 304 ctcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgacca 363 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 390 ctcctacgccgtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatca 449 Query: 364 taattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggagcatgttgt 423 ||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 450 taattaccacgaatcgatgttttccatgttcaagaggatcaacgccaaggagcatgttgt 509 Query: 424 tggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcatgcattgtt 483 ||||||||||||||| ||||||||||| | |||||||||||||||| | || ||| | || Sbjct: 510 tggctggtacagcaccggtccaaaactcagggagaacgacttggatatacacgcactatt 569 Query: 484 taccaactatgttcct-aatcctgtgctggtgattatcg-atgttcaacccaaggagttg 541 | |||||||||||| || ||||| ||||||||||| | ||||||||||||||||||| Sbjct: 570 caataactatgttcctcaaccctgtcctggtgattattgaatgttcaacccaaggagtta 629 Query: 542 ggaatacccaccaaagcatattatgctgttg-aagaggttaaagagaatgctactcagaa 600 |||||||||||||||||||| |||||||| | | ||||||||||||||||||||||| || Sbjct: 630 ggaatacccaccaaagcatactatgctgtggcaggaggttaaagagaatgctactcaaaa 689 Query: 601 a-agtcaaaaggtgttcgtccacgtgccatcag-aaattgctgctcatgaagttgaggaa 658 | |||||||||||||| || || || || |||| |||| ||||| || || ||||||||| Sbjct: 690 acagtcaaaaggtgtttgttcatgttccttcagcaaatagctgcccacgaggttgaggaa 749 Query: 659 atcggagttgagcaccttctgagggatgtgaaagacacaacaataagcacacttgcaaca 718 |||||||||||||| |||||||||||||| || ||||||||||||||||| ||||| ||| Sbjct: 750 atcggagttgagcatcttctgagggatgtcaaggacacaacaataagcacgcttgcgaca 809 Query: 719 gaggtcagcagcaagcttgctgccctgaagggacttgatgcgaggcttacggagatccgg 778 ||||| | |||||||||||| ||| |||| ||||| || || ||||| | ||||||||| Sbjct: 810 gaggtaaccagcaagcttgcagccttgaaaggactggacgcaaggctcagggagatccgt 869 Query: 779 ggttatctagatcttgtaattgaagggaagctcccactgaaccacgagattttgtaccac 838 || || |||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 870 gggtacttagatcttgtaattgaagggaagctcccactgaatcatgagattttgtaccac 929 Query: 839 ttgcaggatgtgtttaatctgctccccaatctcaacgtaaatgagctcattaaagccttt 898 ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| Sbjct: 930 ttgcaggatgtgtttaatctgctccccaatctcaatgtaaacgagcttattaaagccttt 989 Query: 899 gcagtgaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgtc 958 ||||| |||||||| ||||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct: 990 gcagttaaaacaaacgatatgatgttggtcatatacttgtcttctcttatccggagtgtc 1049 Query: 959 atcgctctccacaatttgatcaacaacaagatgctaaacaaggagcatgagaaggccgag 1018 ||||| ||||| || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1050 atcgcactccataacttgatcaataacaagatgctaaacaaggagcatgagaaagccgag 1109 Query: 1019 gattcgaagccagccgccataccta 1043 |||||||||||| |||||||||||| Sbjct: 1110 gattcgaagccaaccgccataccta 1134 Score = 52.0 bits (26), Expect = 0.005 Identities = 58/66 (87%), Gaps = 2/66 (3%) Strand = Plus / Plus Query: 1174 tttacacttt-gatgtttacttcatgtgcgacgaggtcaacgacaaaaccttacattctg 1232 |||||||||| |||||||| ||||||| ||| ||||||||| |||| | |||||||||| Sbjct: 1251 tttacactttcgatgtttatttcatgtacgataaggtcaacggcaaa-ctttacattctg 1309 Query: 1233 tgagct 1238 |||||| Sbjct: 1310 tgagct 1315
>gb|AY109022.1| Zea mays PCO082032 mRNA sequence Length = 1409 Score = 1061 bits (535), Expect = 0.0 Identities = 838/939 (89%) Strand = Plus / Plus Query: 125 gagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggtg 184 ||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||| Sbjct: 131 gagatggacgtggtgaaggcggcgcagttgtcggggcggacgctggaacgggtagtggtg 190 Query: 185 cacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccgg 244 || || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 catcccttggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccgc 250 Query: 245 aagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaac 304 ||||||||||||||||| |||||||||||||| |||||||| |||||| ||||||||| Sbjct: 251 aagcgcgtcgtcggcgtcctcctcggcacctcatcccgcgggtccgtcgatgtcaccaac 310 Query: 305 tcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccat 364 ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 311 tcctacgccgtgccgtttgaggaggatgacaaggatcctaggatctggttccttgaccac 370 Query: 365 aattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggagcatgttgtt 424 |||||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 371 aattaccacgagtcaatgttctccatgttcaagaggattaatgccaaggagcatgttgtt 430 Query: 425 ggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcatgcattgttt 484 ||||||||||||||||| |||||||||| |||||||||||||||||| |||||||| || Sbjct: 431 ggctggtacagcactggcccaaaactaagggagaacgacttggatgtccatgcattattc 490 Query: 485 accaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaaggagttggga 544 | || |||||||||||||| || |||||||||| ||||| |||||||||||| |||| Sbjct: 491 aacagttatgttcctaatccagtcttggtgattattgatgtccaacccaaggagctgggt 550 Query: 545 atacccaccaaagcatattatgctgttgaagaggttaaagagaatgctactcagaaaagt 604 ||||| |||||||| || || ||||| || ||||||||||||||||| |||||||||||| Sbjct: 551 ataccgaccaaagcgtactacgctgtggaggaggttaaagagaatgcaactcagaaaagt 610 Query: 605 caaaaggtgttcgtccacgtgccatcagaaattgctgctcatgaagttgaggaaatcgga 664 || ||||| || ||||| || || ||||||||||| |||||||||||||||||||| ||| Sbjct: 611 cagaaggtatttgtccatgttccttcagaaattgcagctcatgaagttgaggaaattgga 670 Query: 665 gttgagcaccttctgagggatgtgaaagacacaacaataagcacacttgcaacagaggtc 724 ||||| |||||||| |||||||| || ||||||||||||||||||||||| ||||||||| Sbjct: 671 gttgaacaccttctaagggatgtcaaggacacaacaataagcacacttgctacagaggtc 730 Query: 725 agcagcaagcttgctgccctgaagggacttgatgcgaggcttacggagatccggggttat 784 | ||||||||||| ||| | |||||||| ||||| ||||||| ||||||||| | ||| Sbjct: 731 actagcaagcttgcagccttaaagggactcgatgcaaggcttagggagatccgaagctat 790 Query: 785 ctagatcttgtaattgaagggaagctcccactgaaccacgagattttgtaccacttgcag 844 | |||||||||||||| ||||||||||||||||| ||||| ||||||||||| |||||| Sbjct: 791 ttggatcttgtaattgacgggaagctcccactgaatcacgaaattttgtaccatttgcag 850 Query: 845 gatgtgtttaatctgctccccaatctcaacgtaaatgagctcattaaagcctttgcagtg 904 ||||| |||||||| || || ||| | |||||||||||||| |||||||||||||||||| Sbjct: 851 gatgtctttaatctccttccaaatttgaacgtaaatgagctaattaaagcctttgcagtg 910 Query: 905 aaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgtcatcgct 964 |||||||| || |||||| |||| |||||||||||||| || |||||||| ||||| || Sbjct: 911 aaaacaaacgacatgatgttggtgatatacctgtcttctctgatccggagcgtcattgcg 970 Query: 965 ctccacaatttgatcaacaacaagatgctaaacaaggagcatgagaaggccgaggattcg 1024 || |||||||| |||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 971 cttcacaatttaatcaacaataagatgctaaacaaggagcacgagaaggccgaggattcg 1030 Query: 1025 aagccagccgccatacctacggcagccgggagctaaacg 1063 || ||| ||||||| ||||| || ||||| ||||||||| Sbjct: 1031 aaaccaaccgccattcctactgctgccggaagctaaacg 1069
>gb|AY111094.1| Zea mays CL9802_1 mRNA sequence Length = 747 Score = 391 bits (197), Expect = e-105 Identities = 366/423 (86%) Strand = Plus / Minus Query: 641 gctcatgaagttgaggaaatcggagttgagcaccttctgagggatgtgaaagacacaaca 700 |||||||||||||||||||| |||||||| | | | | |||||||| || |||||| || Sbjct: 745 gctcatgaagttgaggaaattggagttgaacccttnntaagggatgtcaaggacacacca 686 Query: 701 ataagcacacttgcaacagaggtcagcagcaagcttgctgccctgaagggacttgatgcg 760 ||||| || ||||| ||||||||| ||||||||||| ||| | |||||||| ||||| Sbjct: 685 ataagaacccttgctacagaggtccctagcaagcttgcagccttaaagggactcgatgca 626 Query: 761 aggcttacggagatccggggttatctagatcttgtaattgaagggaagctcccactgaac 820 ||||||| ||||||||| | ||| | |||||||||||||| ||||||||||||||||| Sbjct: 625 aggcttagggagatccgaagctatttggatcttgtaattgacgggaagctcccactgaat 566 Query: 821 cacgagattttgtaccacttgcaggatgtgtttaatctgctccccaatctcaacgtaaat 880 ||||| ||||||||||| ||||||||||| |||||||| || || ||| | ||||||||| Sbjct: 565 cacgaaattttgtaccatttgcaggatgtctttaatctccttccaaatttgaacgtaaat 506 Query: 881 gagctcattaaagcctttgcagtgaaaacaaatgatatgatgctggtcatatacctgtct 940 ||||| |||||||||||||||||||||||||| || |||||| |||| |||||||||||| Sbjct: 505 gagctaattaaagcctttgcagtgaaaacaaacgacatgatgttggtgatatacctgtct 446 Query: 941 tcccttatccggagtgtcatcgctctccacaatttgatcaacaacaagatgctaaacaag 1000 || || |||||||| ||||| || || |||||||| |||||||| ||||||||||||||| Sbjct: 445 tctctgatccggagcgtcattgcgcttcacaatttaatcaacaataagatgctaaacaag 386 Query: 1001 gagcatgagaaggccgaggattcgaagccagccgccatacctacggcagccgggagctaa 1060 ||||| |||||||||||||||||||| ||| ||||||| ||||| || ||||| |||||| Sbjct: 385 gagcacgagaaggccgaggattcgaaaccaaccgccattcctactgctgccggaagctaa 326 Query: 1061 acg 1063 ||| Sbjct: 325 acg 323
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 331 bits (167), Expect = 4e-87 Identities = 185/191 (96%) Strand = Plus / Plus Query: 124 ggagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggt 183 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 33811467 ggagatggacgtggtgaaggcggcgcagctctcggggcggacgctggagaaggtggtggt 33811526 Query: 184 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33811527 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 33811586 Query: 244 gaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaa 303 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 33811587 caagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaa 33811646 Query: 304 ctcctacgccg 314 ||||||||||| Sbjct: 33811647 ctcctacgccg 33811657 Score = 131 bits (66), Expect = 7e-27 Identities = 87/94 (92%) Strand = Plus / Plus Query: 314 gtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataattaccat 373 ||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 33811887 gtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatcataattaccac 33811946 Query: 374 gagtctatgttctccatgttcaagaggatcaacg 407 || || ||||| |||||||||||||||||||||| Sbjct: 33811947 gaatcgatgttttccatgttcaagaggatcaacg 33811980 Score = 125 bits (63), Expect = 4e-25 Identities = 105/119 (88%) Strand = Plus / Plus Query: 727 cagcaagcttgctgccctgaagggacttgatgcgaggcttacggagatccggggttatct 786 |||||||||||| ||| |||| ||||| || || ||||| | ||||||||| || || | Sbjct: 33813527 cagcaagcttgcagccttgaaaggactggacgcaaggctcagggagatccgtgggtactt 33813586 Query: 787 agatcttgtaattgaagggaagctcccactgaaccacgagattttgtaccacttgcagg 845 ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 33813587 agatcttgtaattgaagggaagctcccactgaatcatgagattttgtaccacttgcagg 33813645 Score = 109 bits (55), Expect = 3e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 898 tgcagtgaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgt 957 |||||| |||||||| ||||||||| ||||||||||| ||||||| |||||||||||||| Sbjct: 33814378 tgcagttaaaacaaacgatatgatgttggtcatatacttgtcttctcttatccggagtgt 33814437 Query: 958 catcgctctccacaatttgatcaacaacaag 988 |||||| ||||| || |||||||| |||||| Sbjct: 33814438 catcgcactccataacttgatcaataacaag 33814468 Score = 101 bits (51), Expect = 6e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 407 gccaaggagcatgttgttggctggtacagcactggtccaaaactaaaggagaacgacttg 466 |||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||| Sbjct: 33812063 gccaaggagcatgttgttggctggtacagcaccggtccaaaactcagggagaacgacttg 33812122 Query: 467 gat 469 ||| Sbjct: 33812123 gat 33812125 Score = 97.6 bits (49), Expect = 1e-16 Identities = 58/61 (95%) Strand = Plus / Plus Query: 842 caggatgtgtttaatctgctccccaatctcaacgtaaatgagctcattaaagcctttgca 901 |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 33814222 caggatgtgtttaatctgctccccaatctcaatgtaaacgagcttattaaagcctttgca 33814281 Query: 902 g 902 | Sbjct: 33814282 g 33814282 Score = 97.6 bits (49), Expect = 1e-16 Identities = 55/57 (96%) Strand = Plus / Plus Query: 987 agatgctaaacaaggagcatgagaaggccgaggattcgaagccagccgccataccta 1043 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 33814562 agatgctaaacaaggagcatgagaaagccgaggattcgaagccaaccgccataccta 33814618 Score = 95.6 bits (48), Expect = 4e-16 Identities = 90/100 (90%), Gaps = 3/100 (3%) Strand = Plus / Plus Query: 490 ctatgttcct-aatcctgtgctggtgattatcga-tgttcaacccaaggagttgggaata 547 |||||||||| || ||||| ||||||||||| || |||||||||||||||||| |||||| Sbjct: 33812899 ctatgttcctcaaccctgtcctggtgattattgaatgttcaacccaaggagttaggaata 33812958 Query: 548 cccaccaaagcatattatgctgttg-aagaggttaaagag 586 |||||||||||||| |||||||| | | |||||||||||| Sbjct: 33812959 cccaccaaagcatactatgctgtggcaggaggttaaagag 33812998 Score = 83.8 bits (42), Expect = 2e-12 Identities = 57/62 (91%) Strand = Plus / Plus Query: 662 ggagttgagcaccttctgagggatgtgaaagacacaacaataagcacacttgcaacagag 721 ||||||||||| |||||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 33813376 ggagttgagcatcttctgagggatgtcaaggacacaacaataagcacgcttgcgacagag 33813435 Query: 722 gt 723 || Sbjct: 33813436 gt 33813437 Score = 52.0 bits (26), Expect = 0.005 Identities = 58/66 (87%), Gaps = 2/66 (3%) Strand = Plus / Plus Query: 1174 tttacacttt-gatgtttacttcatgtgcgacgaggtcaacgacaaaaccttacattctg 1232 |||||||||| |||||||| ||||||| ||| ||||||||| |||| | |||||||||| Sbjct: 33814735 tttacactttcgatgtttatttcatgtacgataaggtcaacggcaaa-ctttacattctg 33814793 Query: 1233 tgagct 1238 |||||| Sbjct: 33814794 tgagct 33814799 Score = 50.1 bits (25), Expect = 0.021 Identities = 69/81 (85%), Gaps = 2/81 (2%) Strand = Plus / Plus Query: 585 agaatgctactcagaaa-agtcaaaaggtgttcgtccacgtgccatcag-aaattgctgc 642 ||||||||||||| ||| |||||||||||||| || || || || |||| |||| ||||| Sbjct: 33813087 agaatgctactcaaaaacagtcaaaaggtgtttgttcatgttccttcagcaaatagctgc 33813146 Query: 643 tcatgaagttgaggaaatcgg 663 || || |||||||||||||| Sbjct: 33813147 ccacgaggttgaggaaatcgg 33813167
>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01, complete sequence Length = 163448 Score = 331 bits (167), Expect = 4e-87 Identities = 185/191 (96%) Strand = Plus / Plus Query: 124 ggagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggt 183 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 23366 ggagatggacgtggtgaaggcggcgcagctctcggggcggacgctggagaaggtggtggt 23425 Query: 184 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23426 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 23485 Query: 244 gaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaa 303 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 23486 caagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaa 23545 Query: 304 ctcctacgccg 314 ||||||||||| Sbjct: 23546 ctcctacgccg 23556 Score = 131 bits (66), Expect = 7e-27 Identities = 87/94 (92%) Strand = Plus / Plus Query: 314 gtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataattaccat 373 ||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 23786 gtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatcataattaccac 23845 Query: 374 gagtctatgttctccatgttcaagaggatcaacg 407 || || ||||| |||||||||||||||||||||| Sbjct: 23846 gaatcgatgttttccatgttcaagaggatcaacg 23879 Score = 125 bits (63), Expect = 4e-25 Identities = 105/119 (88%) Strand = Plus / Plus Query: 727 cagcaagcttgctgccctgaagggacttgatgcgaggcttacggagatccggggttatct 786 |||||||||||| ||| |||| ||||| || || ||||| | ||||||||| || || | Sbjct: 25426 cagcaagcttgcagccttgaaaggactggacgcaaggctcagggagatccgtgggtactt 25485 Query: 787 agatcttgtaattgaagggaagctcccactgaaccacgagattttgtaccacttgcagg 845 ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 25486 agatcttgtaattgaagggaagctcccactgaatcatgagattttgtaccacttgcagg 25544 Score = 109 bits (55), Expect = 3e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 898 tgcagtgaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgt 957 |||||| |||||||| ||||||||| ||||||||||| ||||||| |||||||||||||| Sbjct: 26277 tgcagttaaaacaaacgatatgatgttggtcatatacttgtcttctcttatccggagtgt 26336 Query: 958 catcgctctccacaatttgatcaacaacaag 988 |||||| ||||| || |||||||| |||||| Sbjct: 26337 catcgcactccataacttgatcaataacaag 26367 Score = 101 bits (51), Expect = 6e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 407 gccaaggagcatgttgttggctggtacagcactggtccaaaactaaaggagaacgacttg 466 |||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||| Sbjct: 23962 gccaaggagcatgttgttggctggtacagcaccggtccaaaactcagggagaacgacttg 24021 Query: 467 gat 469 ||| Sbjct: 24022 gat 24024 Score = 97.6 bits (49), Expect = 1e-16 Identities = 58/61 (95%) Strand = Plus / Plus Query: 842 caggatgtgtttaatctgctccccaatctcaacgtaaatgagctcattaaagcctttgca 901 |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 26121 caggatgtgtttaatctgctccccaatctcaatgtaaacgagcttattaaagcctttgca 26180 Query: 902 g 902 | Sbjct: 26181 g 26181 Score = 97.6 bits (49), Expect = 1e-16 Identities = 55/57 (96%) Strand = Plus / Plus Query: 987 agatgctaaacaaggagcatgagaaggccgaggattcgaagccagccgccataccta 1043 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 26461 agatgctaaacaaggagcatgagaaagccgaggattcgaagccaaccgccataccta 26517 Score = 95.6 bits (48), Expect = 4e-16 Identities = 90/100 (90%), Gaps = 3/100 (3%) Strand = Plus / Plus Query: 490 ctatgttcct-aatcctgtgctggtgattatcga-tgttcaacccaaggagttgggaata 547 |||||||||| || ||||| ||||||||||| || |||||||||||||||||| |||||| Sbjct: 24798 ctatgttcctcaaccctgtcctggtgattattgaatgttcaacccaaggagttaggaata 24857 Query: 548 cccaccaaagcatattatgctgttg-aagaggttaaagag 586 |||||||||||||| |||||||| | | |||||||||||| Sbjct: 24858 cccaccaaagcatactatgctgtggcaggaggttaaagag 24897 Score = 83.8 bits (42), Expect = 2e-12 Identities = 57/62 (91%) Strand = Plus / Plus Query: 662 ggagttgagcaccttctgagggatgtgaaagacacaacaataagcacacttgcaacagag 721 ||||||||||| |||||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 25275 ggagttgagcatcttctgagggatgtcaaggacacaacaataagcacgcttgcgacagag 25334 Query: 722 gt 723 || Sbjct: 25335 gt 25336 Score = 52.0 bits (26), Expect = 0.005 Identities = 58/66 (87%), Gaps = 2/66 (3%) Strand = Plus / Plus Query: 1174 tttacacttt-gatgtttacttcatgtgcgacgaggtcaacgacaaaaccttacattctg 1232 |||||||||| |||||||| ||||||| ||| ||||||||| |||| | |||||||||| Sbjct: 26634 tttacactttcgatgtttatttcatgtacgataaggtcaacggcaaa-ctttacattctg 26692 Query: 1233 tgagct 1238 |||||| Sbjct: 26693 tgagct 26698 Score = 50.1 bits (25), Expect = 0.021 Identities = 69/81 (85%), Gaps = 2/81 (2%) Strand = Plus / Plus Query: 585 agaatgctactcagaaa-agtcaaaaggtgttcgtccacgtgccatcag-aaattgctgc 642 ||||||||||||| ||| |||||||||||||| || || || || |||| |||| ||||| Sbjct: 24986 agaatgctactcaaaaacagtcaaaaggtgtttgttcatgttccttcagcaaatagctgc 25045 Query: 643 tcatgaagttgaggaaatcgg 663 || || |||||||||||||| Sbjct: 25046 ccacgaggttgaggaaatcgg 25066
>emb|CR855168.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0112G12, complete sequence Length = 103646 Score = 325 bits (164), Expect = 2e-85 Identities = 186/192 (96%), Gaps = 1/192 (0%) Strand = Plus / Plus Query: 124 ggagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggt 183 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 103323 ggagatggacgtggtgaaggcggcgcagctctcggggcggacgctggagaaggtggtggt 103382 Query: 184 gca-cccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacaccc 242 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103383 gcaacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacaccc 103442 Query: 243 ggaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcacca 302 | |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 103443 gcaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggctccgtcgatgtcacca 103502 Query: 303 actcctacgccg 314 |||||||||||| Sbjct: 103503 actcctacgccg 103514
>ref|NM_120660.2| Arabidopsis thaliana ATHMOV34 (ATHMOV34) mRNA, complete cds Length = 1372 Score = 260 bits (131), Expect = 1e-65 Identities = 442/543 (81%), Gaps = 2/543 (0%) Strand = Plus / Plus Query: 296 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 355 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 298 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 357 Query: 356 ctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggag 415 || || || || ||||||||||| |||||| |||||||||||| || || ||||||||| Sbjct: 358 cttgatcacaactaccatgagtcaatgttccacatgttcaagagaattaatgccaaggag 417 Query: 416 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 475 |||||||| || ||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 418 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggatgttcac 477 Query: 476 gcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaag 535 || ||||| | ||||||||| ||||| || ||||| ||||| ||||| || || || Sbjct: 478 gcgttgttcaatggctatgttccaaatccagtcctggtcattattgatgtccagcctaaa 537 Query: 536 gagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgctact 595 || | ||||| || ||||||||||| ||||| || || |||||||| |||||||||||| Sbjct: 538 gaacttggaatccctaccaaagcatactatgcagtggaggaggttaaggagaatgctact 597 Query: 596 cagaaaagtcaaaaggtgttcgtccacgtgccatcagaaattgctgctcatgaagttgag 655 |||||||| || || || ||||| || ||| | |||||||||||||||||||||||||| Sbjct: 598 cagaaaagccagaaagttttcgttcatgtgtctacagaaattgctgctcatgaagttgag 657 Query: 656 gaaatcggagttgagcaccttctgagggatgtgaaagacacaacaataagcacacttgca 715 |||||||| || ||||| | || ||||||||||||||||||||||| || || || || Sbjct: 658 gaaatcggcgtggagcatttgctcagggatgtgaaagacacaacaatcagtaccctcgcg 717 Query: 716 acagaggtcagcagc-aagcttgctgccctgaagggacttgatgcgaggcttacggagat 774 || ||||||| | || || ||| |||| ||||||| | ||||| | ||| |||||| Sbjct: 718 actgaggtca-ctgcaaaacttactgctttgaaggggttggatgcacgtcttcgggagat 776 Query: 775 ccggggttatctagatcttgtaattgaagggaagctcccactgaaccacgagattttgta 834 |||| ||||||| || |||||||| ||||| |||||||| || ||||| |||||||| || Sbjct: 777 ccggagttatcttgaccttgtaatcgaaggaaagctccctctaaaccatgagattttata 836 Query: 835 cca 837 ||| Sbjct: 837 cca 839 Score = 81.8 bits (41), Expect = 6e-12 Identities = 116/141 (82%) Strand = Plus / Plus Query: 902 gtgaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgtcatc 961 |||||||||||||| |||||||| || || || || || ||||| || |||||||| || Sbjct: 904 gtgaaaacaaatgacatgatgctcgttatctatctatcatccctcattcggagtgtaatt 963 Query: 962 gctctccacaatttgatcaacaacaagatgctaaacaaggagcatgagaaggccgaggat 1021 || |||||||| ||||||||||||||| | || |||||||| ||||| || || ||||| Sbjct: 964 gcgctccacaacttgatcaacaacaagttactgaacaaggaacatgaaaaagcagaggac 1023 Query: 1022 tcgaagccagccgccatacct 1042 || ||||| | ||||||||| Sbjct: 1024 tcaaagcctgtggccatacct 1044
>gb|AY230840.1| Arabidopsis thaliana 26S proteasome subunit RPN8a (RPN8a) mRNA, RPN8a-2 allele, complete cds Length = 932 Score = 260 bits (131), Expect = 1e-65 Identities = 442/543 (81%), Gaps = 2/543 (0%) Strand = Plus / Plus Query: 296 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 355 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 169 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 228 Query: 356 ctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggag 415 || || || || ||||||||||| |||||| |||||||||||| || || ||||||||| Sbjct: 229 cttgatcacaactaccatgagtcaatgttccacatgttcaagagaattaatgccaaggag 288 Query: 416 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 475 |||||||| || ||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 289 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggatgttcac 348 Query: 476 gcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaag 535 || ||||| | ||||||||| ||||| || ||||| ||||| ||||| || || || Sbjct: 349 gcgttgttcaatggctatgttccaaatccagtcctggtcattattgatgtccagcctaaa 408 Query: 536 gagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgctact 595 || | ||||| || ||||||||||| ||||| || || |||||||| |||||||||||| Sbjct: 409 gaacttggaatccctaccaaagcatactatgcagtggaggaggttaaggagaatgctact 468 Query: 596 cagaaaagtcaaaaggtgttcgtccacgtgccatcagaaattgctgctcatgaagttgag 655 |||||||| || || || ||||| || ||| | |||||||||||||||||||||||||| Sbjct: 469 cagaaaagccagaaagttttcgttcatgtgtctacagaaattgctgctcatgaagttgag 528 Query: 656 gaaatcggagttgagcaccttctgagggatgtgaaagacacaacaataagcacacttgca 715 |||||||| || ||||| | || ||||||||||||||||||||||| || || || || Sbjct: 529 gaaatcggcgtggagcatttgctcagggatgtgaaagacacaacaatcagtaccctcgcg 588 Query: 716 acagaggtcagcagc-aagcttgctgccctgaagggacttgatgcgaggcttacggagat 774 || ||||||| | || || ||| |||| ||||||| | ||||| | ||| |||||| Sbjct: 589 actgaggtca-ctgcaaaacttactgctttgaaggggttggatgcacgtcttcgggagat 647 Query: 775 ccggggttatctagatcttgtaattgaagggaagctcccactgaaccacgagattttgta 834 |||| ||||||| || |||||||| ||||| |||||||| || ||||| |||||||| || Sbjct: 648 ccggagttatcttgaccttgtaatcgaaggaaagctccctctaaaccatgagattttata 707 Query: 835 cca 837 ||| Sbjct: 708 cca 710 Score = 81.8 bits (41), Expect = 6e-12 Identities = 116/141 (82%) Strand = Plus / Plus Query: 902 gtgaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgtcatc 961 |||||||||||||| |||||||| || || || || || ||||| || |||||||| || Sbjct: 775 gtgaaaacaaatgacatgatgctcgttatctatctatcatccctcattcggagtgtaatt 834 Query: 962 gctctccacaatttgatcaacaacaagatgctaaacaaggagcatgagaaggccgaggat 1021 || |||||||| ||||||||||||||| | || |||||||| ||||| || || ||||| Sbjct: 835 gcgctccacaacttgatcaacaacaagttactgaacaaggaacatgaaaaagcagaggac 894 Query: 1022 tcgaagccagccgccatacct 1042 || ||||| | ||||||||| Sbjct: 895 tcaaagcctgtggccatacct 915
>gb|AF378878.1|AF378878 Arabidopsis thaliana AT5g05780/MJJ3_19 mRNA, complete cds Length = 1367 Score = 260 bits (131), Expect = 1e-65 Identities = 442/543 (81%), Gaps = 2/543 (0%) Strand = Plus / Plus Query: 296 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 355 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 297 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 356 Query: 356 ctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggag 415 || || || || ||||||||||| |||||| |||||||||||| || || ||||||||| Sbjct: 357 cttgatcacaactaccatgagtcaatgttccacatgttcaagagaattaatgccaaggag 416 Query: 416 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 475 |||||||| || ||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 417 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggatgttcac 476 Query: 476 gcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaag 535 || ||||| | ||||||||| ||||| || ||||| ||||| ||||| || || || Sbjct: 477 gcgttgttcaatggctatgttccaaatccagtcctggtcattattgatgtccagcctaaa 536 Query: 536 gagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgctact 595 || | ||||| || ||||||||||| ||||| || || |||||||| |||||||||||| Sbjct: 537 gaacttggaatccctaccaaagcatactatgcagtggaggaggttaaggagaatgctact 596 Query: 596 cagaaaagtcaaaaggtgttcgtccacgtgccatcagaaattgctgctcatgaagttgag 655 |||||||| || || || ||||| || ||| | |||||||||||||||||||||||||| Sbjct: 597 cagaaaagccagaaagttttcgttcatgtgtctacagaaattgctgctcatgaagttgag 656 Query: 656 gaaatcggagttgagcaccttctgagggatgtgaaagacacaacaataagcacacttgca 715 |||||||| || ||||| | || ||||||||||||||||||||||| || || || || Sbjct: 657 gaaatcggcgtggagcatttgctcagggatgtgaaagacacaacaatcagtaccctcgcg 716 Query: 716 acagaggtcagcagc-aagcttgctgccctgaagggacttgatgcgaggcttacggagat 774 || ||||||| | || || ||| |||| ||||||| | ||||| | ||| |||||| Sbjct: 717 actgaggtca-ctgcaaaacttactgctttgaaggggttggatgcacgtcttcgggagat 775 Query: 775 ccggggttatctagatcttgtaattgaagggaagctcccactgaaccacgagattttgta 834 |||| ||||||| || |||||||| ||||| |||||||| || ||||| |||||||| || Sbjct: 776 ccggagttatcttgaccttgtaatcgaaggaaagctccctctaaaccatgagattttata 835 Query: 835 cca 837 ||| Sbjct: 836 cca 838 Score = 81.8 bits (41), Expect = 6e-12 Identities = 116/141 (82%) Strand = Plus / Plus Query: 902 gtgaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgtcatc 961 |||||||||||||| |||||||| || || || || || ||||| || |||||||| || Sbjct: 903 gtgaaaacaaatgacatgatgctcgttatctatctatcatccctcattcggagtgtaatt 962 Query: 962 gctctccacaatttgatcaacaacaagatgctaaacaaggagcatgagaaggccgaggat 1021 || |||||||| ||||||||||||||| | || |||||||| ||||| || || ||||| Sbjct: 963 gcgctccacaacttgatcaacaacaagttactgaacaaggaacatgaaaaagcagaggac 1022 Query: 1022 tcgaagccagccgccatacct 1042 || ||||| | ||||||||| Sbjct: 1023 tcaaagcctgtggccatacct 1043
>gb|BT002610.1| Arabidopsis thaliana At5g05780/MJJ3_19 mRNA, complete cds Length = 927 Score = 260 bits (131), Expect = 1e-65 Identities = 442/543 (81%), Gaps = 2/543 (0%) Strand = Plus / Plus Query: 296 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 355 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 169 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 228 Query: 356 ctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggag 415 || || || || ||||||||||| |||||| |||||||||||| || || ||||||||| Sbjct: 229 cttgatcacaactaccatgagtcaatgttccacatgttcaagagaattaatgccaaggag 288 Query: 416 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 475 |||||||| || ||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 289 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggatgttcac 348 Query: 476 gcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaag 535 || ||||| | ||||||||| ||||| || ||||| ||||| ||||| || || || Sbjct: 349 gcgttgttcaatggctatgttccaaatccagtcctggtcattattgatgtccagcctaaa 408 Query: 536 gagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgctact 595 || | ||||| || ||||||||||| ||||| || || |||||||| |||||||||||| Sbjct: 409 gaacttggaatccctaccaaagcatactatgcagtggaggaggttaaggagaatgctact 468 Query: 596 cagaaaagtcaaaaggtgttcgtccacgtgccatcagaaattgctgctcatgaagttgag 655 |||||||| || || || ||||| || ||| | |||||||||||||||||||||||||| Sbjct: 469 cagaaaagccagaaagttttcgttcatgtgtctacagaaattgctgctcatgaagttgag 528 Query: 656 gaaatcggagttgagcaccttctgagggatgtgaaagacacaacaataagcacacttgca 715 |||||||| || ||||| | || ||||||||||||||||||||||| || || || || Sbjct: 529 gaaatcggcgtggagcatttgctcagggatgtgaaagacacaacaatcagtaccctcgcg 588 Query: 716 acagaggtcagcagc-aagcttgctgccctgaagggacttgatgcgaggcttacggagat 774 || ||||||| | || || ||| |||| ||||||| | ||||| | ||| |||||| Sbjct: 589 actgaggtca-ctgcaaaacttactgctttgaaggggttggatgcacgtcttcgggagat 647 Query: 775 ccggggttatctagatcttgtaattgaagggaagctcccactgaaccacgagattttgta 834 |||| ||||||| || |||||||| ||||| |||||||| || ||||| |||||||| || Sbjct: 648 ccggagttatcttgaccttgtaatcgaaggaaagctccctctaaaccatgagattttata 707 Query: 835 cca 837 ||| Sbjct: 708 cca 710 Score = 81.8 bits (41), Expect = 6e-12 Identities = 116/141 (82%) Strand = Plus / Plus Query: 902 gtgaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgtcatc 961 |||||||||||||| |||||||| || || || || || ||||| || |||||||| || Sbjct: 775 gtgaaaacaaatgacatgatgctcgttatctatctatcatccctcattcggagtgtaatt 834 Query: 962 gctctccacaatttgatcaacaacaagatgctaaacaaggagcatgagaaggccgaggat 1021 || |||||||| ||||||||||||||| | || |||||||| ||||| || || ||||| Sbjct: 835 gcgctccacaacttgatcaacaacaagttactgaacaaggaacatgaaaaagcagaggac 894 Query: 1022 tcgaagccagccgccatacct 1042 || ||||| | ||||||||| Sbjct: 895 tcaaagcctgtggccatacct 915
>emb|BX830010.1|CNS0A09A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB52ZG12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1302 Score = 244 bits (123), Expect = 7e-61 Identities = 336/407 (82%) Strand = Plus / Plus Query: 296 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 355 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 277 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 336 Query: 356 ctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggag 415 || || || || ||||||||||| |||||| |||||||||||| || || ||||||||| Sbjct: 337 cttgatcacaactaccatgagtcaatgttccacatgttcaagagaattaatgccaaggag 396 Query: 416 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 475 |||||||| || ||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 397 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggatgttcac 456 Query: 476 gcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaag 535 || ||||| | ||||||||| ||||| || ||||| ||||| ||||| || || || Sbjct: 457 gcgttgttcaatggctatgttccaaatccagtcctggtcattattgatgtccagcctaaa 516 Query: 536 gagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgctact 595 || | ||||| || ||||||||||| ||||| || || |||||||| |||||||||||| Sbjct: 517 gaacttggaatccctaccaaagcatactatgcagtggaggaggttaaggagaatgctact 576 Query: 596 cagaaaagtcaaaaggtgttcgtccacgtgccatcagaaattgctgctcatgaagttgag 655 |||||||| || || || ||||| || ||| | |||||||||||||||||||||||||| Sbjct: 577 cagaaaagccagaaagttttcgttcatgtgtctacagaaattgctgctcatgaagttgag 636 Query: 656 gaaatcggagttgagcaccttctgagggatgtgaaagacacaacaat 702 |||||||| || ||||| | || ||||||||||||||||||||||| Sbjct: 637 gaaatcggcgtggagcatttgctcagggatgtgaaagacacaacaat 683 Score = 81.8 bits (41), Expect = 6e-12 Identities = 116/141 (82%) Strand = Plus / Plus Query: 902 gtgaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgtcatc 961 |||||||||||||| |||||||| || || || || || ||||| || |||||||| || Sbjct: 883 gtgaaaacaaatgacatgatgctcgttatctatctatcatccctcattcggagtgtaatt 942 Query: 962 gctctccacaatttgatcaacaacaagatgctaaacaaggagcatgagaaggccgaggat 1021 || |||||||| ||||||||||||||| | || |||||||| ||||| || || ||||| Sbjct: 943 gcgctccacaacttgatcaacaacaagttactgaacaaggaacatgaaaaagcagaggac 1002 Query: 1022 tcgaagccagccgccatacct 1042 || ||||| | ||||||||| Sbjct: 1003 tcaaagcctgtggccatacct 1023
>gb|AY230839.1| Arabidopsis thaliana 26S proteasome subunit RPN8a (RPN8a) mRNA, RPN8a-1 allele, complete cds Length = 1314 Score = 236 bits (119), Expect = 2e-58 Identities = 439/543 (80%), Gaps = 2/543 (0%) Strand = Plus / Plus Query: 296 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 355 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 229 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 288 Query: 356 ctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggag 415 || ||||| || || |||||||| |||||| |||||||||||| || || ||||||||| Sbjct: 289 cttgaccacaactatcatgagtcaatgttccacatgttcaagagaattaatgccaaggag 348 Query: 416 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 475 |||||||| || ||||||||||| || || ||||| ||||| || ||||| || ||| Sbjct: 349 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggacgtccat 408 Query: 476 gcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaag 535 || ||||| | ||||||||| ||||| ||| |||| ||||| ||||| ||||| || Sbjct: 409 gcgttgttcaatggctatgttccaaatccagtgttggtcattattgatgtccaacctaaa 468 Query: 536 gagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgctact 595 || | ||||| ||||| ||||| || ||||| || || ||||| || |||||||||||| Sbjct: 469 gaacttggaatccccacaaaagcttactatgcagtggaggaggtcaaggagaatgctact 528 Query: 596 cagaaaagtcaaaaggtgttcgtccacgtgccatcagaaattgctgctcatgaagttgag 655 |||||||| || || || ||||| |||||| | |||||||||||||||||||||| ||| Sbjct: 529 cagaaaagccagaaagttttcgttcacgtgtctacagaaattgctgctcatgaagtcgag 588 Query: 656 gaaatcggagttgagcaccttctgagggatgtgaaagacacaacaataagcacacttgca 715 |||||||| || ||||| | || |||||||||||||| |||||||| || || || || Sbjct: 589 gaaatcggcgtggagcatttgctcagggatgtgaaagatacaacaatcagtaccctagcg 648 Query: 716 acagaggtcagcagc-aagcttgctgccctgaagggacttgatgcgaggcttacggagat 774 || ||||||| | || || ||| |||| ||||||| | ||||| | ||| |||||| Sbjct: 649 actgaggtca-ctgcaaaacttactgctttgaaggggttggatgcacgtcttcgggagat 707 Query: 775 ccggggttatctagatcttgtaattgaagggaagctcccactgaaccacgagattttgta 834 |||| ||||||| || |||||||| ||||| |||||||| || ||||| |||||||| || Sbjct: 708 ccggagttatcttgaccttgtaatcgaaggaaagctccctctaaaccatgagattttata 767 Query: 835 cca 837 ||| Sbjct: 768 cca 770 Score = 93.7 bits (47), Expect = 2e-15 Identities = 119/143 (83%) Strand = Plus / Plus Query: 900 cagtgaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgtca 959 |||||||||||||||| |||||||| || || || || || ||||| ||||||||||| | Sbjct: 833 cagtgaaaacaaatgacatgatgctcgttatctatctatcatccctcatccggagtgtaa 892 Query: 960 tcgctctccacaatttgatcaacaacaagatgctaaacaaggagcatgagaaggccgagg 1019 | || |||||||| ||||||||||||||| | || |||||||| ||||| || || |||| Sbjct: 893 ttgcgctccacaacttgatcaacaacaagttactgaacaaggaacatgaaaaagcagagg 952 Query: 1020 attcgaagccagccgccatacct 1042 | || ||||| | ||||||||| Sbjct: 953 actcaaagcctgtggccatacct 975
>gb|AY087393.1| Arabidopsis thaliana clone 34868 mRNA, complete sequence Length = 1368 Score = 236 bits (119), Expect = 2e-58 Identities = 439/543 (80%), Gaps = 2/543 (0%) Strand = Plus / Plus Query: 296 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 355 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 298 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 357 Query: 356 ctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggag 415 || ||||| || || |||||||| |||||| |||||||||||| || || ||||||||| Sbjct: 358 cttgaccacaactatcatgagtcaatgttccacatgttcaagagaattaatgccaaggag 417 Query: 416 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 475 |||||||| || ||||||||||| || || ||||| ||||| || ||||| || ||| Sbjct: 418 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggacgtccat 477 Query: 476 gcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaag 535 || ||||| | ||||||||| ||||| ||| |||| ||||| ||||| ||||| || Sbjct: 478 gcgttgttcaatggctatgttccaaatccagtgttggtcattattgatgtccaacctaaa 537 Query: 536 gagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgctact 595 || | ||||| ||||| ||||| || ||||| || || ||||| || |||||||||||| Sbjct: 538 gaacttggaatccccacaaaagcttactatgcagtggaggaggtcaaggagaatgctact 597 Query: 596 cagaaaagtcaaaaggtgttcgtccacgtgccatcagaaattgctgctcatgaagttgag 655 |||||||| || || || ||||| |||||| | |||||||||||||||||||||| ||| Sbjct: 598 cagaaaagccagaaagttttcgttcacgtgtctacagaaattgctgctcatgaagtcgag 657 Query: 656 gaaatcggagttgagcaccttctgagggatgtgaaagacacaacaataagcacacttgca 715 |||||||| || ||||| | || |||||||||||||| |||||||| || || || || Sbjct: 658 gaaatcggcgtggagcatttgctcagggatgtgaaagatacaacaatcagtaccctagcg 717 Query: 716 acagaggtcagcagc-aagcttgctgccctgaagggacttgatgcgaggcttacggagat 774 || ||||||| | || || ||| |||| ||||||| | ||||| | ||| |||||| Sbjct: 718 actgaggtca-ctgcaaaacttactgctttgaaggggttggatgcacgtcttcgggagat 776 Query: 775 ccggggttatctagatcttgtaattgaagggaagctcccactgaaccacgagattttgta 834 |||| ||||||| || |||||||| ||||| |||||||| || ||||| |||||||| || Sbjct: 777 ccggagttatcttgaccttgtaatcgaaggaaagctccctctaaaccatgagattttata 836 Query: 835 cca 837 ||| Sbjct: 837 cca 839 Score = 93.7 bits (47), Expect = 2e-15 Identities = 119/143 (83%) Strand = Plus / Plus Query: 900 cagtgaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgtca 959 |||||||||||||||| |||||||| || || || || || ||||| ||||||||||| | Sbjct: 902 cagtgaaaacaaatgacatgatgctcgttatctatctatcatccctcatccggagtgtaa 961 Query: 960 tcgctctccacaatttgatcaacaacaagatgctaaacaaggagcatgagaaggccgagg 1019 | || |||||||| ||||||||||||||| | || |||||||| ||||| || || |||| Sbjct: 962 ttgcgctccacaacttgatcaacaacaagttactgaacaaggaacatgaaaaagcagagg 1021 Query: 1020 attcgaagccagccgccatacct 1042 | || ||||| | ||||||||| Sbjct: 1022 actcaaagcctgtggccatacct 1044
>gb|U54560.1|ATU54560 Arabidopsis thaliana putative 26S proteasome subunit athMOV34 mRNA, complete cds Length = 1357 Score = 236 bits (119), Expect = 2e-58 Identities = 439/543 (80%), Gaps = 2/543 (0%) Strand = Plus / Plus Query: 296 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 355 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 260 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 319 Query: 356 ctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggag 415 || ||||| || || |||||||| |||||| |||||||||||| || || ||||||||| Sbjct: 320 cttgaccacaactatcatgagtcaatgttccacatgttcaagagaattaatgccaaggag 379 Query: 416 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 475 |||||||| || ||||||||||| || || ||||| ||||| || ||||| || ||| Sbjct: 380 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggacgtccat 439 Query: 476 gcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaag 535 || ||||| | ||||||||| ||||| ||| |||| ||||| ||||| ||||| || Sbjct: 440 gcgttgttcaatggctatgttccaaatccagtgttggtcattattgatgtccaacctaaa 499 Query: 536 gagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgctact 595 || | ||||| ||||| ||||| || ||||| || || ||||| || |||||||||||| Sbjct: 500 gaacttggaatccccacaaaagcttactatgcagtggaggaggtcaaggagaatgctact 559 Query: 596 cagaaaagtcaaaaggtgttcgtccacgtgccatcagaaattgctgctcatgaagttgag 655 |||||||| || || || ||||| |||||| | |||||||||||||||||||||| ||| Sbjct: 560 cagaaaagccagaaagttttcgttcacgtgtctacagaaattgctgctcatgaagtcgag 619 Query: 656 gaaatcggagttgagcaccttctgagggatgtgaaagacacaacaataagcacacttgca 715 |||||||| || ||||| | || |||||||||||||| |||||||| || || || || Sbjct: 620 gaaatcggcgtggagcatttgctcagggatgtgaaagatacaacaatcagtaccctagcg 679 Query: 716 acagaggtcagcagc-aagcttgctgccctgaagggacttgatgcgaggcttacggagat 774 || ||||||| | || || ||| |||| ||||||| | ||||| | ||| |||||| Sbjct: 680 actgaggtca-ctgcaaaacttactgctttgaaggggttggatgcacgtcttcgggagat 738 Query: 775 ccggggttatctagatcttgtaattgaagggaagctcccactgaaccacgagattttgta 834 |||| ||||||| || |||||||| ||||| |||||||| || ||||| |||||||| || Sbjct: 739 ccggagttatcttgaccttgtaatcgaaggaaagctccctctaaaccatgagattttata 798 Query: 835 cca 837 ||| Sbjct: 799 cca 801 Score = 93.7 bits (47), Expect = 2e-15 Identities = 119/143 (83%) Strand = Plus / Plus Query: 900 cagtgaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgtca 959 |||||||||||||||| |||||||| || || || || || ||||| ||||||||||| | Sbjct: 864 cagtgaaaacaaatgacatgatgctcgttatctatctatcatccctcatccggagtgtaa 923 Query: 960 tcgctctccacaatttgatcaacaacaagatgctaaacaaggagcatgagaaggccgagg 1019 | || |||||||| ||||||||||||||| | || |||||||| ||||| || || |||| Sbjct: 924 ttgcgctccacaacttgatcaacaacaagttactgaacaaggaacatgaaaaagcagagg 983 Query: 1020 attcgaagccagccgccatacct 1042 | || ||||| | ||||||||| Sbjct: 984 actcaaagcctgtggccatacct 1006
>emb|BX833880.1|CNS09Z77 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL81ZD09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1265 Score = 220 bits (111), Expect = 1e-53 Identities = 333/407 (81%) Strand = Plus / Plus Query: 296 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 355 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 274 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 333 Query: 356 ctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggag 415 || || || || ||||||||||| |||||| |||||||||||| || || ||||||||| Sbjct: 334 cttgatcacaactaccatgagtcaatgttccacatgttcaagagaattaatgccaaggag 393 Query: 416 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 475 |||||||| || ||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 394 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggatgttcac 453 Query: 476 gcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaag 535 || ||||| | ||||||||| ||||| || ||||| ||||| ||||| || || || Sbjct: 454 gcgttgttcaatggctatgttccaaatccagtcctggtcattattgatgtccagcctaaa 513 Query: 536 gagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgctact 595 || | ||||| || ||||||||||| ||||| || || |||||||| |||||||||||| Sbjct: 514 gaacttggaatccctaccaaagcatactatgcagtggaggaggttaaggagaatgctact 573 Query: 596 cagaaaagtcaaaaggtgttcgtccacgtgccatcagaaattgctgctcatgaagttgag 655 |||||||| || || || ||||| || || |||||||||||||||||||||||||| Sbjct: 574 cagaaaagccagaaagttttcgttcatgtttttacagaaattgctgctcatgaagttgag 633 Query: 656 gaaatcggagttgagcaccttctgagggatgtgaaagacacaacaat 702 |||||||| || ||||| | || |||||||||||||| |||||||| Sbjct: 634 gaaatcggcgtggagcatttgctcagggatgtgaaagaaacaacaat 680 Score = 77.8 bits (39), Expect = 9e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 902 gtgaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgtcatc 961 |||||||||||||| |||||||| || || || || || ||||| || |||||||| || Sbjct: 880 gtgaaaacaaatgacatgatgctcgttatctatctatcatccctcattcggagtgtaatt 939 Query: 962 gctctccacaatttgatcaacaacaagatgctaaacaaggagcatga 1008 || |||||||| ||||||||||||||| | || |||||||| ||||| Sbjct: 940 gcgctccacaacttgatcaacaacaagttactgaacaaggaacatga 986
>gb|DQ226995.1| Nicotiana benthamiana RPN8 mRNA, partial cds Length = 689 Score = 198 bits (100), Expect = 4e-47 Identities = 373/464 (80%) Strand = Plus / Plus Query: 530 cccaaggagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaat 589 ||||||||| | |||||||| || || ||||| ||||| ||||| || |||||||||||| Sbjct: 224 cccaaggagctaggaatacctacaaaggcatactatgcagttgaggaagttaaagagaat 283 Query: 590 gctactcagaaaagtcaaaaggtgttcgtccacgtgccatcagaaattgctgctcatgaa 649 || ||||| ||||| || |||||||| | || || || ||||||||||||||||| ||| Sbjct: 284 gcaactcaaaaaagccagaaggtgtttgcgcatgtaccttcagaaattgctgctcacgaa 343 Query: 650 gttgaggaaatcggagttgagcaccttctgagggatgtgaaagacacaacaataagcaca 709 ||||| | |||||| ||||||||| | || |||||||||||||| || ||||| || || Sbjct: 344 gttgaagtaatcggtgttgagcacttgctaagggatgtgaaagatactacaatcagtact 403 Query: 710 cttgcaacagaggtcagcagcaagcttgctgccctgaagggacttgatgcgaggcttacg 769 |||||||| ||||| | | | || || || || |||||||| | ||||| | ||| Sbjct: 404 cttgcaactgaggtaaccgggaaactggcagctttgaagggattggatgctcgacttcaa 463 Query: 770 gagatccggggttatctagatcttgtaattgaagggaagctcccactgaaccacgagatt 829 ||||| || ||| |||||||||||| ||||| |||||||| || ||||||| |||||| Sbjct: 464 gagatacgaagttgtctagatcttgtcattgatgggaagcttcctttgaaccatgagatt 523 Query: 830 ttgtaccacttgcaggatgtgtttaatctgctccccaatctcaacgtaaatgagctcatt 889 | ||||| || |||||||| || || || || || ||||| || || ||| | || Sbjct: 524 ctataccatttacaggatgtcttcaacctactgccaaatctaaatgttgctgaattagtt 583 Query: 890 aaagcctttgcagtgaaaacaaatgatatgatgctggtcatatacctgtcttcccttatc 949 ||||| ||| |||||||||| |||||||||||| ||||||||||| | ||||| |||||| Sbjct: 584 aaagcattttcagtgaaaacgaatgatatgatgttggtcatatacttatcttcacttatc 643 Query: 950 cggagtgtcatcgctctccacaatttgatcaacaacaagatgct 993 || ||||| || ||||| || || |||||||||||||||||||| Sbjct: 644 cgaagtgtaattgctcttcataacttgatcaacaacaagatgct 687 Score = 129 bits (65), Expect = 3e-26 Identities = 119/137 (86%) Strand = Plus / Plus Query: 314 gtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataattaccat 373 ||||| |||||||||||||||| |||||| || |||||||| || |||||||| || ||| Sbjct: 8 gtgccctttgaggaggatgacagggacccaagtatctggtttcttgaccataactatcat 67 Query: 374 gagtctatgttctccatgttcaagaggatcaacgccaaggagcatgttgttggctggtac 433 || || ||||| ||||||||| ||||| |||||||| |||||||||||||||||||| Sbjct: 68 gaatcaatgttttccatgttccgtaggataaacgccaaagagcatgttgttggctggtat 127 Query: 434 agcactggtccaaaact 450 ||||| ||||||||||| Sbjct: 128 agcaccggtccaaaact 144
>dbj|AK228032.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-54-G14 Length = 1252 Score = 188 bits (95), Expect = 4e-44 Identities = 329/407 (80%) Strand = Plus / Plus Query: 293 gacgtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctgg 352 |||||||||||| |||||| ||||| ||||||||||||||||| ||| | || || ||| Sbjct: 265 gacgtcaccaacagctacgcagtgccttttgaggaggatgacaaagacacaagcatatgg 324 Query: 353 ttcctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaag 412 || || || || || ||||| ||||| ||||| |||||||||||| || || || ||| Sbjct: 325 tttcttgatcacaactaccacgagtcgatgtttcacatgttcaagagaattaatgctaag 384 Query: 413 gagcatgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgtt 472 |||||| |||| || ||||||||||| ||||| ||||| ||||| || ||||||||| Sbjct: 385 gagcatattgtgggttggtacagcacaggtcctaaacttcgagagaatgatttggatgtt 444 Query: 473 catgcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaaccc 532 || || || || | ||| ||||| ||||| ||| |||| ||||| ||||| ||||| Sbjct: 445 cacgctttattcaatggctacgttccaaatccagtgttggtcattattgatgtccaacct 504 Query: 533 aaggagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgct 592 || || | ||||| ||||| |||||||| ||||| ||||| ||||| |||||||||||| Sbjct: 505 aaagaacttggaatccccacaaaagcatactatgcggttgaggaggtgaaagagaatgct 564 Query: 593 actcagaaaagtcaaaaggtgttcgtccacgtgccatcagaaattgctgctcatgaagtt 652 || |||||||| ||| |||| || || |||||||| |||||||||| |||||||||||| Sbjct: 565 acccagaaaagccaacaggtttttgtacacgtgcctacagaaattgcagctcatgaagtt 624 Query: 653 gaggaaatcggagttgagcaccttctgagggatgtgaaagacacaac 699 |||||||| || || || || | || |||||||| ||||||||||| Sbjct: 625 gaggaaattggtgtggaacatttgctcagggatgtaaaagacacaac 671 Score = 115 bits (58), Expect = 4e-22 Identities = 121/142 (85%) Strand = Plus / Plus Query: 888 ttaaagcctttgcagtgaaaacaaatgatatgatgctggtcatatacctgtcttccctta 947 |||||||||||||||| ||||||||||| |||||||| || || ||||| ||||| |||| Sbjct: 860 ttaaagcctttgcagtaaaaacaaatgacatgatgctcgtaatctacctttcttcgctta 919 Query: 948 tccggagtgtcatcgctctccacaatttgatcaacaacaagatgctaaacaaggagcatg 1007 |||| ||||| ||||| ||||||| |||||||||||||||| || | || ||||| |||| Sbjct: 920 tccgaagtgtaatcgccctccacagtttgatcaacaacaagttgttgaataaggaacatg 979 Query: 1008 agaaggccgaggattcgaagcc 1029 | || || ||||| || ||||| Sbjct: 980 aaaaagcagaggactcaaagcc 1001
>ref|NM_111962.3| Arabidopsis thaliana unknown protein (AT3G11270) mRNA, complete cds Length = 1417 Score = 188 bits (95), Expect = 4e-44 Identities = 329/407 (80%) Strand = Plus / Plus Query: 293 gacgtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctgg 352 |||||||||||| |||||| ||||| ||||||||||||||||| ||| | || || ||| Sbjct: 265 gacgtcaccaacagctacgcagtgccttttgaggaggatgacaaagacacaagcatatgg 324 Query: 353 ttcctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaag 412 || || || || || ||||| ||||| ||||| |||||||||||| || || || ||| Sbjct: 325 tttcttgatcacaactaccacgagtcgatgtttcacatgttcaagagaattaatgctaag 384 Query: 413 gagcatgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgtt 472 |||||| |||| || ||||||||||| ||||| ||||| ||||| || ||||||||| Sbjct: 385 gagcatattgtgggttggtacagcacaggtcctaaacttcgagagaatgatttggatgtt 444 Query: 473 catgcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaaccc 532 || || || || | ||| ||||| ||||| ||| |||| ||||| ||||| ||||| Sbjct: 445 cacgctttattcaatggctacgttccaaatccagtgttggtcattattgatgtccaacct 504 Query: 533 aaggagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgct 592 || || | ||||| ||||| |||||||| ||||| ||||| ||||| |||||||||||| Sbjct: 505 aaagaacttggaatccccacaaaagcatactatgcggttgaggaggtgaaagagaatgct 564 Query: 593 actcagaaaagtcaaaaggtgttcgtccacgtgccatcagaaattgctgctcatgaagtt 652 || |||||||| ||| |||| || || |||||||| |||||||||| |||||||||||| Sbjct: 565 acccagaaaagccaacaggtttttgtacacgtgcctacagaaattgcagctcatgaagtt 624 Query: 653 gaggaaatcggagttgagcaccttctgagggatgtgaaagacacaac 699 |||||||| || || || || | || |||||||| ||||||||||| Sbjct: 625 gaggaaattggtgtggaacatttgctcagggatgtaaaagacacaac 671 Score = 115 bits (58), Expect = 4e-22 Identities = 121/142 (85%) Strand = Plus / Plus Query: 888 ttaaagcctttgcagtgaaaacaaatgatatgatgctggtcatatacctgtcttccctta 947 |||||||||||||||| ||||||||||| |||||||| || || ||||| ||||| |||| Sbjct: 860 ttaaagcctttgcagtaaaaacaaatgacatgatgctcgtaatctacctttcttcgctta 919 Query: 948 tccggagtgtcatcgctctccacaatttgatcaacaacaagatgctaaacaaggagcatg 1007 |||| ||||| ||||| ||||||| |||||||||||||||| || | || ||||| |||| Sbjct: 920 tccgaagtgtaatcgccctccacagtttgatcaacaacaagttgttgaataaggaacatg 979 Query: 1008 agaaggccgaggattcgaagcc 1029 | || || ||||| || ||||| Sbjct: 980 aaaaagcagaggactcaaagcc 1001
>gb|AY258412.1| Arabidopsis thaliana 26S proteasome subunit RPN8b (RPN8b) mRNA, partial cds Length = 930 Score = 188 bits (95), Expect = 4e-44 Identities = 329/407 (80%) Strand = Plus / Plus Query: 293 gacgtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctgg 352 |||||||||||| |||||| ||||| ||||||||||||||||| ||| | || || ||| Sbjct: 166 gacgtcaccaacagctacgcagtgccttttgaggaggatgacaaagacacaagcatatgg 225 Query: 353 ttcctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaag 412 || || || || || ||||| ||||| ||||| |||||||||||| || || || ||| Sbjct: 226 tttcttgatcacaactaccacgagtcgatgtttcacatgttcaagagaattaatgctaag 285 Query: 413 gagcatgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgtt 472 |||||| |||| || ||||||||||| ||||| ||||| ||||| || ||||||||| Sbjct: 286 gagcatattgtgggttggtacagcacaggtcctaaacttcgagagaatgatttggatgtt 345 Query: 473 catgcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaaccc 532 || || || || | ||| ||||| ||||| ||| |||| ||||| ||||| ||||| Sbjct: 346 cacgctttattcaatggctacgttccaaatccagtgttggtcattattgatgtccaacct 405 Query: 533 aaggagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgct 592 || || | ||||| ||||| |||||||| ||||| ||||| ||||| |||||||||||| Sbjct: 406 aaagaacttggaatccccacaaaagcatactatgcggttgaggaggtgaaagagaatgct 465 Query: 593 actcagaaaagtcaaaaggtgttcgtccacgtgccatcagaaattgctgctcatgaagtt 652 || |||||||| ||| |||| || || |||||||| |||||||||| |||||||||||| Sbjct: 466 acccagaaaagccaacaggtttttgtacacgtgcctacagaaattgcagctcatgaagtt 525 Query: 653 gaggaaatcggagttgagcaccttctgagggatgtgaaagacacaac 699 |||||||| || || || || | || |||||||| ||||||||||| Sbjct: 526 gaggaaattggtgtggaacatttgctcagggatgtaaaagacacaac 572 Score = 115 bits (58), Expect = 4e-22 Identities = 121/142 (85%) Strand = Plus / Plus Query: 888 ttaaagcctttgcagtgaaaacaaatgatatgatgctggtcatatacctgtcttccctta 947 |||||||||||||||| ||||||||||| |||||||| || || ||||| ||||| |||| Sbjct: 761 ttaaagcctttgcagtaaaaacaaatgacatgatgctcgtaatctacctttcttcgctta 820 Query: 948 tccggagtgtcatcgctctccacaatttgatcaacaacaagatgctaaacaaggagcatg 1007 |||| ||||| ||||| ||||||| |||||||||||||||| || | || ||||| |||| Sbjct: 821 tccgaagtgtaatcgccctccacagtttgatcaacaacaagttgttgaataaggaacatg 880 Query: 1008 agaaggccgaggattcgaagcc 1029 | || || ||||| || ||||| Sbjct: 881 aaaaagcagaggactcaaagcc 902
>gb|DQ222517.1| Solanum tuberosum clone 119G03 unknown mRNA Length = 1191 Score = 151 bits (76), Expect = 8e-33 Identities = 214/260 (82%) Strand = Plus / Plus Query: 770 gagatccggggttatctagatcttgtaattgaagggaagctcccactgaaccacgagatt 829 ||||| ||| ||||| | ||| |||| ||||| ||||||||||| ||||||| |||||| Sbjct: 643 gagatacggagttatttggatgttgtcattgatgggaagctccccttgaaccatgagatt 702 Query: 830 ttgtaccacttgcaggatgtgtttaatctgctccccaatctcaacgtaaatgagctcatt 889 | ||||| ||||||||||| || ||||| | |||||||| || || ||| | | Sbjct: 703 ctataccatttgcaggatgttttcaatctattacccaatctaaatgttgctgaattagta 762 Query: 890 aaagcctttgcagtgaaaacaaatgatatgatgctggtcatatacctgtcttcccttatc 949 ||| | ||| |||||||||| |||||||||||| |||||||||| || ||||| |||||| Sbjct: 763 aaatcattttcagtgaaaacgaatgatatgatgttggtcatatatctatcttcacttatc 822 Query: 950 cggagtgtcatcgctctccacaatttgatcaacaacaagatgctaaacaaggagcatgag 1009 || ||||| || |||||||| || |||||||||||||||||||| |||||||| || || Sbjct: 823 cgaagtgtaattgctctccataacttgatcaacaacaagatgcttaacaaggaacacgaa 882 Query: 1010 aaggccgaggattcgaagcc 1029 ||||| |||||||||||||| Sbjct: 883 aaggctgaggattcgaagcc 902 Score = 141 bits (71), Expect = 7e-30 Identities = 161/191 (84%) Strand = Plus / Plus Query: 533 aaggagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgct 592 |||||| | |||||||| || || ||||| ||||| ||||| || |||||||||||||| Sbjct: 406 aaggagctaggaataccaactaaggcatactatgcagttgaggaagttaaagagaatgca 465 Query: 593 actcagaaaagtcaaaaggtgttcgtccacgtgccatcagaaattgctgctcatgaagtt 652 ||||||||||| || || ||||| || || || || |||||||| ||||||||||||||| Sbjct: 466 actcagaaaagccagaatgtgtttgtgcatgtaccttcagaaatcgctgctcatgaagtt 525 Query: 653 gaggaaatcggagttgagcaccttctgagggatgtgaaagacacaacaataagcacactt 712 || |||||||| ||||||||| | || |||||||||||||| ||||| || || || ||| Sbjct: 526 gaagaaatcggtgttgagcacttgctaagggatgtgaaagatacaactatcagtaccctt 585 Query: 713 gcaacagaggt 723 ||||| ||||| Sbjct: 586 gcaactgaggt 596 Score = 105 bits (53), Expect = 4e-19 Identities = 116/137 (84%) Strand = Plus / Plus Query: 314 gtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataattaccat 373 ||||| ||||||||||| |||| |||||| || || ||||| || |||||||| || ||| Sbjct: 187 gtgccctttgaggaggaggacagggaccctagtatttggtttcttgaccataactatcat 246 Query: 374 gagtctatgttctccatgttcaagaggatcaacgccaaggagcatgttgttggctggtac 433 || || ||||| ||||||||| ||||| ||||| ||||||||||||||||| ||||| Sbjct: 247 gaatcaatgttttccatgttccgtaggataaacgcaaaggagcatgttgttggttggtat 306 Query: 434 agcactggtccaaaact 450 ||||||||||| ||||| Sbjct: 307 agcactggtcccaaact 323
>gb|AY639600.1| Lycopersicon pimpinellifolium orion Hcr9 gene cluster, complete sequence Length = 28951 Score = 103 bits (52), Expect = 2e-18 Identities = 82/92 (89%) Strand = Plus / Plus Query: 897 ttgcagtgaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtg 956 ||||||||||||| |||||||||||| |||||||||| || ||||| |||||||| |||| Sbjct: 28032 ttgcagtgaaaacgaatgatatgatgttggtcatatatctatcttcacttatccgaagtg 28091 Query: 957 tcatcgctctccacaatttgatcaacaacaag 988 | || |||||||| || ||||||||||||||| Sbjct: 28092 taattgctctccataacttgatcaacaacaag 28123 Score = 63.9 bits (32), Expect = 1e-06 Identities = 65/76 (85%) Strand = Plus / Plus Query: 585 agaatgctactcagaaaagtcaaaaggtgttcgtccacgtgccatcagaaattgctgctc 644 ||||||| ||||||||||| || || ||||| || || || || |||||||| ||||||| Sbjct: 26721 agaatgcaactcagaaaagccagaatgtgtttgtgcatgtaccttcagaaatcgctgctc 26780 Query: 645 atgaagttgaggaaat 660 |||||||||| ||||| Sbjct: 26781 atgaagttgaagaaat 26796 Score = 63.9 bits (32), Expect = 1e-06 Identities = 65/76 (85%) Strand = Plus / Plus Query: 770 gagatccggggttatctagatcttgtaattgaagggaagctcccactgaaccacgagatt 829 ||||| ||| ||||| |||||||||| ||||| ||||||||||| ||||||| |||||| Sbjct: 27191 gagatacggagttatttagatcttgtcattgatgggaagctccccttgaaccatgagatt 27250 Query: 830 ttgtaccacttgcagg 845 | ||||| ||||||| Sbjct: 27251 ctataccatttgcagg 27266 Score = 58.0 bits (29), Expect = 9e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 410 aaggagcatgttgttggctggtacagcactggtccaaaact 450 ||||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 24806 aaggagcatgttgttggttggtatagcactggtcccaaact 24846 Score = 50.1 bits (25), Expect = 0.021 Identities = 67/81 (82%) Strand = Plus / Plus Query: 314 gtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataattaccat 373 ||||| ||||||||||| || | |||||| | |||||||| || |||||||| || ||| Sbjct: 24615 gtgccctttgaggaggaggagagggaccctggtatctggtttcttgaccataactatcat 24674 Query: 374 gagtctatgttctccatgttc 394 || || ||||| ||||||||| Sbjct: 24675 gaatcgatgttttccatgttc 24695
>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete sequence Length = 103517 Score = 89.7 bits (45), Expect = 2e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 900 cagtgaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgtca 959 |||| ||||||||||| |||||||| || || ||||| ||||| |||||||| ||||| | Sbjct: 68221 cagtaaaaacaaatgacatgatgctcgtaatctacctttcttcgcttatccgaagtgtaa 68280 Query: 960 tcgctctccacaatttgatcaacaacaag 988 |||| ||||||| |||||||||||||||| Sbjct: 68281 tcgccctccacagtttgatcaacaacaag 68309 Score = 79.8 bits (40), Expect = 2e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 585 agaatgctactcagaaaagtcaaaaggtgttcgtccacgtgccatcagaaattgctgctc 644 |||||||||| |||||||| ||| |||| || || |||||||| |||||||||| |||| Sbjct: 67393 agaatgctacccagaaaagccaacaggtttttgtacacgtgcctacagaaattgcagctc 67452 Query: 645 atgaagttgaggaaat 660 |||||||||||||||| Sbjct: 67453 atgaagttgaggaaat 67468 Score = 44.1 bits (22), Expect = 1.3 Identities = 70/86 (81%) Strand = Plus / Plus Query: 314 gtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataattaccat 373 ||||| ||||||||||||||||| ||| | || || ||||| || || || || ||||| Sbjct: 66731 gtgccttttgaggaggatgacaaagacacaagcatatggtttcttgatcacaactaccac 66790 Query: 374 gagtctatgttctccatgttcaagag 399 ||||| ||||| |||||||||||| Sbjct: 66791 gagtcgatgtttcacatgttcaagag 66816 Score = 42.1 bits (21), Expect = 5.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 410 aaggagcatgttgttggctggtacagcactggtccaaaact 450 ||||||||| |||| || ||||||||||| ||||| ||||| Sbjct: 66907 aaggagcatattgtgggttggtacagcacaggtcctaaact 66947
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 85.7 bits (43), Expect = 4e-13 Identities = 100/119 (84%) Strand = Plus / Minus Query: 727 cagcaagcttgctgccctgaagggacttgatgcgaggcttacggagatccggggttatct 786 |||||||||||| ||| |||| ||||| || |||||||| | |||||||| | || | Sbjct: 9599540 cagcaagcttgcagccttgaaaggactggacgcgaggctcagagagatccgtaggtactt 9599481 Query: 787 agatcttgtaattgaagggaagctcccactgaaccacgagattttgtaccacttgcagg 845 ||||||||||||| ||||| ||||| |||||| || |||||||||||||||||||||| Sbjct: 9599480 agatcttgtaatttaagggcagctcggactgaatcatgagattttgtaccacttgcagg 9599422 Score = 83.8 bits (42), Expect = 2e-12 Identities = 57/62 (91%) Strand = Plus / Minus Query: 662 ggagttgagcaccttctgagggatgtgaaagacacaacaataagcacacttgcaacagag 721 ||||||||||||||||||| |||||| || |||||||||||| |||| |||||||||||| Sbjct: 9599691 ggagttgagcaccttctgatggatgtcaaggacacaacaataggcacgcttgcaacagag 9599632 Query: 722 gt 723 || Sbjct: 9599631 gt 9599630 Score = 69.9 bits (35), Expect = 2e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 490 ctatgttcctaatcctgtgctggtgattatcgatgttcaacccaaggagtt 540 |||||||||||| ||||| ||||||||||| ||||||||||| |||||||| Sbjct: 9600143 ctatgttcctaaccctgtcctggtgattattgatgttcaaccgaaggagtt 9600093 Score = 63.9 bits (32), Expect = 1e-06 Identities = 65/76 (85%) Strand = Plus / Minus Query: 585 agaatgctactcagaaaagtcaaaaggtgttcgtccacgtgccatcagaaattgctgctc 644 |||||||||||||||||||| |||||||||| || || || || |||||||| ||||| | Sbjct: 9599979 agaatgctactcagaaaagttaaaaggtgtttgttcatgttccttcagaaatagctgccc 9599920 Query: 645 atgaagttgaggaaat 660 | | ||||||||||| Sbjct: 9599919 actaggttgaggaaat 9599904
>dbj|AP006465.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1059D01 Length = 158792 Score = 85.7 bits (43), Expect = 4e-13 Identities = 100/119 (84%) Strand = Plus / Minus Query: 727 cagcaagcttgctgccctgaagggacttgatgcgaggcttacggagatccggggttatct 786 |||||||||||| ||| |||| ||||| || |||||||| | |||||||| | || | Sbjct: 107270 cagcaagcttgcagccttgaaaggactggacgcgaggctcagagagatccgtaggtactt 107211 Query: 787 agatcttgtaattgaagggaagctcccactgaaccacgagattttgtaccacttgcagg 845 ||||||||||||| ||||| ||||| |||||| || |||||||||||||||||||||| Sbjct: 107210 agatcttgtaatttaagggcagctcggactgaatcatgagattttgtaccacttgcagg 107152 Score = 83.8 bits (42), Expect = 2e-12 Identities = 57/62 (91%) Strand = Plus / Minus Query: 662 ggagttgagcaccttctgagggatgtgaaagacacaacaataagcacacttgcaacagag 721 ||||||||||||||||||| |||||| || |||||||||||| |||| |||||||||||| Sbjct: 107421 ggagttgagcaccttctgatggatgtcaaggacacaacaataggcacgcttgcaacagag 107362 Query: 722 gt 723 || Sbjct: 107361 gt 107360 Score = 69.9 bits (35), Expect = 2e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 490 ctatgttcctaatcctgtgctggtgattatcgatgttcaacccaaggagtt 540 |||||||||||| ||||| ||||||||||| ||||||||||| |||||||| Sbjct: 107873 ctatgttcctaaccctgtcctggtgattattgatgttcaaccgaaggagtt 107823 Score = 63.9 bits (32), Expect = 1e-06 Identities = 65/76 (85%) Strand = Plus / Minus Query: 585 agaatgctactcagaaaagtcaaaaggtgttcgtccacgtgccatcagaaattgctgctc 644 |||||||||||||||||||| |||||||||| || || || || |||||||| ||||| | Sbjct: 107709 agaatgctactcagaaaagttaaaaggtgtttgttcatgttccttcagaaatagctgccc 107650 Query: 645 atgaagttgaggaaat 660 | | ||||||||||| Sbjct: 107649 actaggttgaggaaat 107634
>dbj|AB005237.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJJ3 Length = 87835 Score = 85.7 bits (43), Expect = 4e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 585 agaatgctactcagaaaagtcaaaaggtgttcgtccacgtgccatcagaaattgctgctc 644 ||||||||||||||||||| || || || ||||| || ||| | ||||||||||||||| Sbjct: 57800 agaatgctactcagaaaagccagaaagttttcgttcatgtgtctacagaaattgctgctc 57859 Query: 645 atgaagttgaggaaatcgg 663 ||||||||||||||||||| Sbjct: 57860 atgaagttgaggaaatcgg 57878 Score = 77.8 bits (39), Expect = 9e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 898 tgcagtgaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgt 957 |||||||||||||||||| |||||||| || || || || || ||||| || |||||||| Sbjct: 58662 tgcagtgaaaacaaatgacatgatgctcgttatctatctatcatccctcattcggagtgt 58721 Query: 958 catcgctctccacaatttgatcaacaacaag 988 || || |||||||| ||||||||||||||| Sbjct: 58722 aattgcgctccacaacttgatcaacaacaag 58752 Score = 75.8 bits (38), Expect = 4e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 314 gtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataattaccat 373 ||||| ||||||||||||||||| ||||| || |||||||| || || || || |||||| Sbjct: 57169 gtgccctttgaggaggatgacaaagacccaagcatctggtttcttgatcacaactaccat 57228 Query: 374 gagtctatgttctccatgttcaagag 399 ||||| |||||| |||||||||||| Sbjct: 57229 gagtcaatgttccacatgttcaagag 57254 Score = 50.1 bits (25), Expect = 0.021 Identities = 64/77 (83%) Strand = Plus / Plus Query: 407 gccaaggagcatgttgttggctggtacagcactggtccaaaactaaaggagaacgacttg 466 ||||||||||||||||| || ||||||||||| || || ||||| ||||| || ||| Sbjct: 57345 gccaaggagcatgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttg 57404 Query: 467 gatgttcatgcattgtt 483 |||||||| || ||||| Sbjct: 57405 gatgttcacgcgttgtt 57421 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 680 agggatgtgaaagacacaacaat 702 ||||||||||||||||||||||| Sbjct: 58026 agggatgtgaaagacacaacaat 58048 Score = 42.1 bits (21), Expect = 5.1 Identities = 75/93 (80%) Strand = Plus / Plus Query: 490 ctatgttcctaatcctgtgctggtgattatcgatgttcaacccaaggagttgggaatacc 549 ||||||||| ||||| || ||||| ||||| ||||| || || || || | ||||| || Sbjct: 57612 ctatgttccaaatccagtcctggtcattattgatgtccagcctaaagaacttggaatccc 57671 Query: 550 caccaaagcatattatgctgttgaagaggttaa 582 ||||||||||| ||||| || || |||||||| Sbjct: 57672 taccaaagcatactatgcagtggaggaggttaa 57704
>gb|AC189201.1| Brassica rapa subsp. pekinensis clone KBrB005N03, complete sequence Length = 166828 Score = 83.8 bits (42), Expect = 2e-12 Identities = 75/86 (87%) Strand = Plus / Plus Query: 314 gtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataattaccat 373 ||||| ||||||||||||||||||||||| || |||||||| || || || || |||||| Sbjct: 74114 gtgccttttgaggaggatgacaaggacccaagtatctggtttcttgatcacaactaccat 74173 Query: 374 gagtctatgttctccatgttcaagag 399 ||||| |||||| |||||||||||| Sbjct: 74174 gagtcaatgttccacatgttcaagag 74199 Score = 69.9 bits (35), Expect = 2e-08 Identities = 89/107 (83%) Strand = Plus / Plus Query: 198 tgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccggaagcgcgtcgtcg 257 |||| |||||||||||||| |||||||||||||| ||| | || ||||||||||||| Sbjct: 73781 tgcttagcatcgtcgaccattacaaccgcgtcgctaaggactcgcgcaagcgcgtcgtcg 73840 Query: 258 gcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaac 304 |||| |||||||| | | ||| || || ||||| |||||||||||| Sbjct: 73841 gcgttctcctcgggagcagctctcgtggtgtcgttgacgtcaccaac 73887 Score = 63.9 bits (32), Expect = 1e-06 Identities = 65/76 (85%) Strand = Plus / Plus Query: 585 agaatgctactcagaaaagtcaaaaggtgttcgtccacgtgccatcagaaattgctgctc 644 ||||||||||||| ||||| || || || || || |||||| | ||||||||||||||| Sbjct: 74734 agaatgctactcaaaaaagccagaaagtctttgttcacgtgtcgacagaaattgctgctc 74793 Query: 645 atgaagttgaggaaat 660 ||||||| |||||||| Sbjct: 74794 atgaagtcgaggaaat 74809 Score = 60.0 bits (30), Expect = 2e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 899 gcagtgaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgtc 958 ||||||||||||||||| |||||||| || || || || || || || ||| ||||||| Sbjct: 75545 gcagtgaaaacaaatgacatgatgctcgttatctatctatcgtcactcatcaggagtgta 75604 Query: 959 atcgctctccacaatttgatcaacaacaag 988 || || || ||||| ||||||||||||||| Sbjct: 75605 attgcgcttcacaacttgatcaacaacaag 75634 Score = 58.0 bits (29), Expect = 9e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 407 gccaaggagcatgttgttggctggtacagcactggtccaaaactaaaggagaacgacttg 466 ||||||||||||||||| || |||||||| || ||||| ||||| |||||||| ||| Sbjct: 74292 gccaaggagcatgttgtaggttggtacagtacaggtcctaaacttcgtgagaacgatttg 74351 Query: 467 gatgttcatgcattgtt 483 || |||||||| ||||| Sbjct: 74352 gacgttcatgctttgtt 74368
>dbj|AP005834.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0005C24 Length = 168151 Score = 83.8 bits (42), Expect = 2e-12 Identities = 57/62 (91%) Strand = Plus / Minus Query: 662 ggagttgagcaccttctgagggatgtgaaagacacaacaataagcacacttgcaacagag 721 ||||||||||||||||||| |||||| || |||||||||||| |||| |||||||||||| Sbjct: 154 ggagttgagcaccttctgatggatgtcaaggacacaacaataggcacgcttgcaacagag 95 Query: 722 gt 723 || Sbjct: 94 gt 93 Score = 69.9 bits (35), Expect = 2e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 490 ctatgttcctaatcctgtgctggtgattatcgatgttcaacccaaggagtt 540 |||||||||||| ||||| ||||||||||| ||||||||||| |||||||| Sbjct: 606 ctatgttcctaaccctgtcctggtgattattgatgttcaaccgaaggagtt 556 Score = 63.9 bits (32), Expect = 1e-06 Identities = 65/76 (85%) Strand = Plus / Minus Query: 585 agaatgctactcagaaaagtcaaaaggtgttcgtccacgtgccatcagaaattgctgctc 644 |||||||||||||||||||| |||||||||| || || || || |||||||| ||||| | Sbjct: 442 agaatgctactcagaaaagttaaaaggtgtttgttcatgttccttcagaaatagctgccc 383 Query: 645 atgaagttgaggaaat 660 | | ||||||||||| Sbjct: 382 actaggttgaggaaat 367
>emb|CT961056.6| M.truncatula DNA sequence from clone MTH2-16N8 on chromosome 3, complete sequence Length = 132908 Score = 81.8 bits (41), Expect = 6e-12 Identities = 83/97 (85%) Strand = Plus / Minus Query: 490 ctatgttcctaatcctgtgctggtgattatcgatgttcaacccaaggagttgggaatacc 549 ||||||||| ||||| || |||| || || |||||| |||| |||||||||||||| || Sbjct: 109054 ctatgttccaaatcccgttttggttataattgatgttgaacctaaggagttgggaattcc 108995 Query: 550 caccaaagcatattatgctgttgaagaggttaaagag 586 || |||||||| ||||||||||| |||||||||||| Sbjct: 108994 aacaaaagcatactatgctgttgaggaggttaaagag 108958 Score = 79.8 bits (40), Expect = 2e-11 Identities = 67/76 (88%) Strand = Plus / Minus Query: 585 agaatgctactcagaaaagtcaaaaggtgttcgtccacgtgccatcagaaattgctgctc 644 ||||||||||||||||||| |||||||| || || || |||| |||||| || ||||||| Sbjct: 108820 agaatgctactcagaaaagccaaaaggtctttgtgcatgtgcaatcagagatcgctgctc 108761 Query: 645 atgaagttgaggaaat 660 |||| ||||||||||| Sbjct: 108760 atgaggttgaggaaat 108745 Score = 63.9 bits (32), Expect = 1e-06 Identities = 74/88 (84%) Strand = Plus / Minus Query: 901 agtgaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgtcat 960 ||||||||| ||||||||||||||||| |||||||| || || || || | ||||| || Sbjct: 107902 agtgaaaacgaatgatatgatgctggtaatatacctatcgtctctcattagaagtgtaat 107843 Query: 961 cgctctccacaatttgatcaacaacaag 988 || |||||||| ||||| ||||||||| Sbjct: 107842 tgcactccacaacttgattaacaacaag 107815 Score = 52.0 bits (26), Expect = 0.005 Identities = 71/86 (82%) Strand = Plus / Minus Query: 314 gtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataattaccat 373 ||||| ||||| || |||||||||||||| || || ||||| |||||||| ||||| || Sbjct: 109593 gtgccttttgaagaagatgacaaggaccccagcatttggtttctcgaccacaattatcac 109534 Query: 374 gagtctatgttctccatgttcaagag 399 || | ||||| |||||||| ||||| Sbjct: 109533 gaagcaatgttttccatgtttaagag 109508 Score = 44.1 bits (22), Expect = 1.3 Identities = 34/38 (89%) Strand = Plus / Minus Query: 410 aaggagcatgttgttggctggtacagcactggtccaaa 447 ||||||||||| || || ||||| |||||||||||||| Sbjct: 109419 aaggagcatgtggtggggtggtatagcactggtccaaa 109382
>dbj|AK222016.1| Arabidopsis thaliana mRNA for 26S proteasome regulatory subunit S12, complete cds, clone: RAFL22-69-D21 Length = 531 Score = 81.8 bits (41), Expect = 6e-12 Identities = 116/141 (82%) Strand = Plus / Plus Query: 902 gtgaaaacaaatgatatgatgctggtcatatacctgtcttcccttatccggagtgtcatc 961 |||||||||||||| |||||||| || || || || || ||||| || |||||||| || Sbjct: 182 gtgaaaacaaatgacatgatgctcgttatctatctatcatccctcattcggagtgtaatt 241 Query: 962 gctctccacaatttgatcaacaacaagatgctaaacaaggagcatgagaaggccgaggat 1021 || |||||||| ||||||||||||||| | || |||||||| ||||| || || ||||| Sbjct: 242 gcgctccacaacttgatcaacaacaagttactgaacaaggaacatgaaaaagcagaggac 301 Query: 1022 tcgaagccagccgccatacct 1042 || ||||| | ||||||||| Sbjct: 302 tcaaagcctgtggccatacct 322
>emb|AJ719835.1| Gallus gallus partial mRNA for hypothetical protein, clone 7b3 Length = 1038 Score = 71.9 bits (36), Expect = 6e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 176 gtggtggtgcacccgctggtgctgctcagcatcgtcgaccactacaac 223 |||||||||||||||||||||||||||||| ||||||| |||| |||| Sbjct: 96 gtggtggtgcacccgctggtgctgctcagcgtcgtcgatcacttcaac 143
>gb|DQ216029.1| Taeniopygia guttata clone 0064P0001A12 proteasome 26S non-ATPase subunit 7-like mRNA, complete sequence Length = 1062 Score = 65.9 bits (33), Expect = 4e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 175 ggtggtggtgcacccgctggtgctgctcagcatcgtcgaccactacaac 223 ||||||||||||||||||||||||||||||| |||| || |||| |||| Sbjct: 58 ggtggtggtgcacccgctggtgctgctcagcgtcgtggatcacttcaac 106
>gb|DQ216028.1| Taeniopygia guttata clone 0058P0011D07 proteasome 26S non-ATPase subunit 7-like mRNA, complete sequence Length = 1121 Score = 65.9 bits (33), Expect = 4e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 175 ggtggtggtgcacccgctggtgctgctcagcatcgtcgaccactacaac 223 ||||||||||||||||||||||||||||||| |||| || |||| |||| Sbjct: 117 ggtggtggtgcacccgctggtgctgctcagcgtcgtggatcacttcaac 165
>gb|DQ216027.1| Taeniopygia guttata clone 0063P0033E11 proteasome 26S non-ATPase subunit 7-like mRNA, complete sequence Length = 1068 Score = 65.9 bits (33), Expect = 4e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 175 ggtggtggtgcacccgctggtgctgctcagcatcgtcgaccactacaac 223 ||||||||||||||||||||||||||||||| |||| || |||| |||| Sbjct: 65 ggtggtggtgcacccgctggtgctgctcagcgtcgtggatcacttcaac 113
>gb|DQ216026.1| Taeniopygia guttata clone 0061P0027A07 proteasome 26S non-ATPase subunit 7-like mRNA, complete sequence Length = 1090 Score = 65.9 bits (33), Expect = 4e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 175 ggtggtggtgcacccgctggtgctgctcagcatcgtcgaccactacaac 223 ||||||||||||||||||||||||||||||| |||| || |||| |||| Sbjct: 73 ggtggtggtgcacccgctggtgctgctcagcgtcgtggatcacttcaac 121
>ref|XM_320392.2| Anopheles gambiae str. PEST ENSANGP00000013949 (ENSANGG00000011460), partial mRNA Length = 977 Score = 58.0 bits (29), Expect = 9e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 173 aaggtggtggtgcacccgctggtgctgctcagcatcgtcgaccactacaaccg 225 |||||| | |||||||||||||||||||||||| | || ||||||| |||||| Sbjct: 150 aaggtgatcgtgcacccgctggtgctgctcagcgtggtggaccacttcaaccg 202
>dbj|AB225523.1| Aspergillus oryzae cDNA, contig sequence: AoEST2376 Length = 579 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 500 aatcctgtgctggtgattatcgatgttcaacccaaggag 538 |||||| ||||||||||| ||||||||||||| |||||| Sbjct: 502 aatcctttgctggtgattgtcgatgttcaaccaaaggag 540
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 500 aatcctgtgctggtgattatcgatgttcaacccaaggag 538 |||||| ||||||||||| ||||||||||||| |||||| Sbjct: 2599584 aatcctttgctggtgattgtcgatgttcaaccaaaggag 2599622 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 653 gaggaaatcggagttgagcaccttct 678 ||||||||||| |||||||||||||| Sbjct: 2599820 gaggaaatcggtgttgagcaccttct 2599845
>ref|XM_511103.2| PREDICTED: Pan troglodytes proteasome 26S non-ATPase subunit 7, transcript variant 2 (PSMD7), mRNA Length = 5617 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 160 agaaggtggtggtccaccccctggtgctgctcag 193
>ref|XM_001134967.1| PREDICTED: Pan troglodytes proteasome 26S non-ATPase subunit 7, transcript variant 1 (PSMD7), mRNA Length = 5578 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 121 agaaggtggtggtccaccccctggtgctgctcag 154
>ref|NM_002811.3| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog) (PSMD7), mRNA Length = 1678 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 152 agaaggtggtggtccaccccctggtgctgctcag 185
>gb|BC013513.1| Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 7, mRNA (cDNA clone IMAGE:4235236), with apparent retained intron Length = 1036 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 132 agaaggtggtggttcaccccctggtgctgctcag 165
>gb|AY126304.1| Mus musculus isolate 0126.HH59 M-MuLV retroviral integration site Length = 453 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Minus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 172 agaaggtggtggttcaccccctggtgctgctcag 139
>gb|BC000338.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog), mRNA (cDNA clone IMAGE:2822691), partial cds Length = 1107 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 147 agaaggtggtggtccaccccctggtgctgctcag 180
>gb|BC012606.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog), mRNA (cDNA clone MGC:13607 IMAGE:4334058), complete cds Length = 1175 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 141 agaaggtggtggtccaccccctggtgctgctcag 174
>dbj|AK146128.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730007F24 product:Warning: possibly chimeric clone, full insert sequence Length = 2324 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 98 agaaggtggtggttcaccccctggtgctgctcag 131
>dbj|AK159825.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420032C16 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 7, full insert sequence Length = 1090 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 102 agaaggtggtggttcaccccctggtgctgctcag 135
>dbj|AK158379.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930111J18 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 7, full insert sequence Length = 861 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 127 agaaggtggtggttcaccccctggtgctgctcag 160
>ref|NM_001034423.1| Bos taurus proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog) (PSMD7), mRNA gb|BC103437.1| Bos taurus proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog), mRNA (cDNA clone MGC:128537 IMAGE:7985023), complete cds Length = 1135 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 128 agaaggtggtggtccaccccctggtgctgctcag 161
>dbj|AK012463.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700060P05 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 7, full insert sequence Length = 850 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 115 agaaggtggtggttcaccccctggtgctgctcag 148
>dbj|AK031013.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830490F08 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 7, full insert sequence Length = 1017 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 101 agaaggtggtggttcaccccctggtgctgctcag 134
>gb|AC009120.8|AC009120 Homo sapiens chromosome 16 clone RP11-484E3, complete sequence Length = 195342 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 166162 agaaggtggtggtccaccccctggtgctgctcag 166195
>emb|CR601507.1| full-length cDNA clone CS0DI083YB17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 994 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 80 agaaggtggtggtccaccccctggtgctgctcag 113
>emb|CR620737.1| full-length cDNA clone CS0DF037YG19 of Fetal brain of Homo sapiens (human) Length = 1568 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 104 agaaggtggtggtccaccccctggtgctgctcag 137
>emb|CR599542.1| full-length cDNA clone CS0DA004YM20 of Neuroblastoma of Homo sapiens (human) Length = 1597 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 102 agaaggtggtggtccaccccctggtgctgctcag 135
>emb|CR616820.1| full-length cDNA clone CS0DG002YN14 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1599 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 93 agaaggtggtggtccaccccctggtgctgctcag 126
>emb|CR600117.1| full-length cDNA clone CS0DH004YP16 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1588 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 88 agaaggtggtggtccaccccctggtgctgctcag 121
>emb|CR597005.1| full-length cDNA clone CS0DA004YG14 of Neuroblastoma of Homo sapiens (human) Length = 1585 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 91 agaaggtggtggtccaccccctggtgctgctcag 124
>emb|CR595724.1| full-length cDNA clone CS0DJ012YF02 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1584 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 91 agaaggtggtggtccaccccctggtgctgctcag 124
>dbj|D50063.1|HUMP40MOV Homo sapiens mRNA for proteasome subunit p40 / Mov34 protein, complete cds Length = 1602 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 103 agaaggtggtggtccaccccctggtgctgctcag 136
>ref|NM_010817.1| Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Psmd7), mRNA Length = 1599 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 150 agaaggtggtggttcaccccctggtgctgctcag 183
>gb|AC134855.5| Mus musculus BAC clone RP24-301M10 from 8, complete sequence Length = 142427 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 79152 agaaggtggtggttcaccccctggtgctgctcag 79185
>gb|M64634.1|MUSMOV341 Mouse Mov-34 36 kD protein gene, exon 1 Length = 852 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 441 agaaggtggtggttcaccccctggtgctgctcag 474
>gb|M64641.1|MUSMOV34 Mouse Mov-34 protein mRNA, complete cds Length = 1547 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||||||||||| Sbjct: 98 agaaggtggtggttcaccccctggtgctgctcag 131
>dbj|AP004970.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT30P03, TM0148, complete sequence Length = 106000 Score = 50.1 bits (25), Expect = 0.021 Identities = 28/29 (96%) Strand = Plus / Minus Query: 170 gagaaggtggtggtgcacccgctggtgct 198 |||||||||||||| |||||||||||||| Sbjct: 66609 gagaaggtggtggttcacccgctggtgct 66581
>dbj|AK239568.1| Sus scrofa mRNA, clone:THY010113C12, expressed in thymus Length = 1617 Score = 46.1 bits (23), Expect = 0.33 Identities = 29/31 (93%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgct 201 ||||||||||||| ||||| ||||||||||| Sbjct: 118 agaaggtggtggtccaccccctggtgctgct 148
>ref|XM_503049.1| Yarrowia lipolytica CLIB122, YALI0D19910g predicted mRNA Length = 1014 Score = 46.1 bits (23), Expect = 0.33 Identities = 26/27 (96%) Strand = Plus / Plus Query: 388 catgttcaagaggatcaacgccaagga 414 ||||||||||| ||||||||||||||| Sbjct: 294 catgttcaagaagatcaacgccaagga 320
>gb|AY609436.1| Sus scrofa clone Clu_11484.scr.msk.p1.Contig1, mRNA sequence Length = 1608 Score = 46.1 bits (23), Expect = 0.33 Identities = 29/31 (93%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgct 201 ||||||||||||| ||||| ||||||||||| Sbjct: 105 agaaggtggtggtccaccccctggtgctgct 135
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 46.1 bits (23), Expect = 0.33 Identities = 26/27 (96%) Strand = Plus / Plus Query: 388 catgttcaagaggatcaacgccaagga 414 ||||||||||| ||||||||||||||| Sbjct: 2516688 catgttcaagaagatcaacgccaagga 2516714
>emb|CT837576.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA123E07, full insert sequence Length = 1427 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 gtcgtcggcgtgctcctcggcacctcctcc 280 ||||||||||| ||||||||| |||||||| Sbjct: 1375 gtcgtcggcgtcctcctcggctcctcctcc 1346
>ref|NM_001056903.1| Oryza sativa (japonica cultivar-group) Os03g0416400 (Os03g0416400) mRNA, complete cds Length = 1503 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 gtcgtcggcgtgctcctcggcacctcctcc 280 ||||||||||| ||||||||| |||||||| Sbjct: 1461 gtcgtcggcgtcctcctcggctcctcctcc 1432
>ref|XR_024593.1| PREDICTED: Pan troglodytes hypothetical LOC466495 (LOC466495), mRNA Length = 2646 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 gctggagaaggtggtggtgcac 187 |||||||||||||||||||||| Sbjct: 2282 gctggagaaggtggtggtgcac 2261
>gb|AC186988.2| Canis Familiaris chromosome 29, clone XX-319E23, complete sequence Length = 185140 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 586 gaatgctactcagaaaagtcaa 607 |||||||||||||||||||||| Sbjct: 117686 gaatgctactcagaaaagtcaa 117707
>ref|XR_016003.1| PREDICTED: Homo sapiens similar to SEC14-like protein 1 (LOC732095), mRNA Length = 2583 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 gctggagaaggtggtggtgcac 187 |||||||||||||||||||||| Sbjct: 2224 gctggagaaggtggtggtgcac 2203
>ref|XR_015983.1| PREDICTED: Homo sapiens similar to SEC14-like protein 1 (LOC729799), mRNA Length = 2586 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 gctggagaaggtggtggtgcac 187 |||||||||||||||||||||| Sbjct: 2227 gctggagaaggtggtggtgcac 2206
>gb|DQ826744.1| Consortium cosmid clone pGZ1 biotin synthase, hypothetical protein, endoribonuclease, ABC-transporter substrate-binding protein, 4-chlorobenzoyl-CoA ligase (fcbA), 4-chlorobenzoyl-CoA dehalogenase (fcbB), transcriptional regulator tetR family, acetoin dehydrogenase alpha-subunit, pyruvate dehydrogenase beta-subunit, asparaginase, phospholipase, istB-like ATP-binding protein, molybdopterin dehydrogenase, carbon monooxide dehydrogenase, ferredoxin, hypothetical protein, ABC-transporter, hypothetical protein, glycosyl transferase, oxidoreductase, histidinol phosphatase, glycosyl transferase, ADP-heptose:LPS heptocyltransferase, and glycosyl transferase genes, complete cds; and unknown gene Length = 33768 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 accgcgtcgcccgcgacacccg 243 |||||||||||||||||||||| Sbjct: 12902 accgcgtcgcccgcgacacccg 12881
>ref|XM_001076658.1| PREDICTED: Rattus norvegicus proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (predicted) (Psmd7_predicted), mRNA Length = 1590 Score = 44.1 bits (22), Expect = 1.3 Identities = 31/34 (91%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 |||| |||||||| ||||| |||||||||||||| Sbjct: 150 agaaagtggtggtccaccccctggtgctgctcag 183
>ref|XM_226439.4| PREDICTED: Rattus norvegicus proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (predicted) (Psmd7_predicted), mRNA Length = 1590 Score = 44.1 bits (22), Expect = 1.3 Identities = 31/34 (91%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 |||| |||||||| ||||| |||||||||||||| Sbjct: 150 agaaagtggtggtccaccccctggtgctgctcag 183
>ref|XM_001102147.1| PREDICTED: Macaca mulatta proteasome 26S non-ATPase subunit 7 (PSMD7), mRNA Length = 2150 Score = 44.1 bits (22), Expect = 1.3 Identities = 31/34 (91%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 ||||||||||||| ||||| |||||| ||||||| Sbjct: 152 agaaggtggtggtccaccccctggtgttgctcag 185
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 gtcgtcggcgtgctcctcggcacctcctcc 280 ||||||||||| ||||||||| |||||||| Sbjct: 65894 gtcgtcggcgtcctcctcggctcctcctcc 65865
>gb|DQ196343.1| Homo sapiens prostate cancer antigen-1 (DEPC1) gene, complete cds Length = 43337 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 gctggagaaggtggtggtgcac 187 |||||||||||||||||||||| Sbjct: 20626 gctggagaaggtggtggtgcac 20605
>gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genomic sequence, complete sequence Length = 157662 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 gtcgtcggcgtgctcctcggcacctcctcc 280 ||||||||||| ||||||||| |||||||| Sbjct: 130242 gtcgtcggcgtcctcctcggctcctcctcc 130213
>ref|XM_858060.1| PREDICTED: Canis familiaris similar to 26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein), transcript variant 2 (LOC479671), mRNA Length = 525 Score = 44.1 bits (22), Expect = 1.3 Identities = 31/34 (91%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 |||||||||| || ||||| |||||||||||||| Sbjct: 67 agaaggtggtcgttcaccccctggtgctgctcag 100
>ref|XM_536802.2| PREDICTED: Canis familiaris similar to 26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein), transcript variant 1 (LOC479671), mRNA Length = 1547 Score = 44.1 bits (22), Expect = 1.3 Identities = 31/34 (91%) Strand = Plus / Plus Query: 171 agaaggtggtggtgcacccgctggtgctgctcag 204 |||||||||| || ||||| |||||||||||||| Sbjct: 91 agaaggtggtcgttcaccccctggtgctgctcag 124
>ref|XM_381155.1| Gibberella zeae PH-1 chromosome 1 conserved hypothetical protein (FG00979.1) partial mRNA Length = 1479 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Minus Query: 153 tgtcggggcggacgctggagaaggtggtgg 182 |||||||||||||| |||||||| |||||| Sbjct: 1165 tgtcggggcggacgttggagaagatggtgg 1136
>ref|XM_458621.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D04235g) partial mRNA Length = 963 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 464 ttggatgttcatgcattgtttaccaa 489 ||||| |||||||||||||||||||| Sbjct: 801 ttggaggttcatgcattgtttaccaa 826
>gb|AC087521.10| Homo sapiens chromosome 11, clone RP11-613D13, complete sequence Length = 188967 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 gctggagaaggtggtggtgcac 187 |||||||||||||||||||||| Sbjct: 64198 gctggagaaggtggtggtgcac 64219
>gb|AC083943.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0044A10, from chromosome 10, complete sequence Length = 169270 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 111 ggaggagaggggaggagatgga 132 |||||||||||||||||||||| Sbjct: 4590 ggaggagaggggaggagatgga 4569
>ref|XM_811105.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506127.150) partial mRNA Length = 2574 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 993 taaacaaggagcatgagaaggc 1014 |||||||||||||||||||||| Sbjct: 971 taaacaaggagcatgagaaggc 992
>ref|XM_804367.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503593.30) partial mRNA Length = 2574 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 993 taaacaaggagcatgagaaggc 1014 |||||||||||||||||||||| Sbjct: 971 taaacaaggagcatgagaaggc 992
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 111 ggaggagaggggaggagatgga 132 |||||||||||||||||||||| Sbjct: 13049071 ggaggagaggggaggagatgga 13049050
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 gtcgtcggcgtgctcctcggcacctcctcc 280 ||||||||||| ||||||||| |||||||| Sbjct: 17093065 gtcgtcggcgtcctcctcggctcctcctcc 17093036
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 gtcgtcggcgtgctcctcggcacctcctcc 280 ||||||||||| ||||||||| |||||||| Sbjct: 37294022 gtcgtcggcgtcctcctcggctcctcctcc 37293993 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ggaggagaggggaggagatgg 131 ||||||||||||||||||||| Sbjct: 22238451 ggaggagaggggaggagatgg 22238471
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii Length = 1602771 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 464 ttggatgttcatgcattgtttaccaa 489 ||||| |||||||||||||||||||| Sbjct: 302320 ttggaggttcatgcattgtttaccaa 302295
>dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423B08 Length = 151490 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 gtcgtcggcgtgctcctcggcacctcctcc 280 ||||||||||| ||||||||| |||||||| Sbjct: 6056 gtcgtcggcgtcctcctcggctcctcctcc 6027
>dbj|AP003287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0679C12 Length = 153666 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 gtcgtcggcgtgctcctcggcacctcctcc 280 ||||||||||| ||||||||| |||||||| Sbjct: 131011 gtcgtcggcgtcctcctcggctcctcctcc 130982
>gb|AC146788.13| Medicago truncatula clone mth2-11a6, complete sequence Length = 116349 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 169 ggagaaggtggtggtgcacccgctg 193 ||||||||||||||||||| ||||| Sbjct: 81958 ggagaaggtggtggtgcacgcgctg 81934
>gb|AC132249.3| Mus musculus BAC clone RP24-434O21 from chromosome 6, complete sequence Length = 180332 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ggaggagaggggaggagatgg 131 ||||||||||||||||||||| Sbjct: 166233 ggaggagaggggaggagatgg 166253
>ref|XM_749538.1| Aspergillus fumigatus Af293 nuclear exosome complex 3'-5' exonuclease subunit (Afu3g09880) partial mRNA Length = 2295 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1200 gcgacgaggtcaacgacaaaa 1220 ||||||||||||||||||||| Sbjct: 181 gcgacgaggtcaacgacaaaa 161
>gb|AC156639.2| Mus musculus BAC clone RP23-301M11 from chromosome 9, complete sequence Length = 188292 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 accttctgagggatgtgaaag 692 ||||||||||||||||||||| Sbjct: 4140 accttctgagggatgtgaaag 4160
>gb|AC139525.3| Medicago truncatula clone mth2-26o22, complete sequence Length = 103039 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 169 ggagaaggtggtggtgcacccgctg 193 ||||||||||||||||||| ||||| Sbjct: 37788 ggagaaggtggtggtgcacgcgctg 37812
>gb|AC109327.10| Homo sapiens chromosome 17, clone RP11-93C20, complete sequence Length = 113000 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ggaggagaggggaggagatgg 131 ||||||||||||||||||||| Sbjct: 20403 ggaggagaggggaggagatgg 20423
>dbj|AP003310.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0022F12 Length = 137716 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ggaggagaggggaggagatgg 131 ||||||||||||||||||||| Sbjct: 20930 ggaggagaggggaggagatgg 20950
>gb|AC133638.7| Homo sapiens chromosome 17, clone CTD-2125J20, complete sequence Length = 139560 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 ggaggagaggggaggagatgg 131 ||||||||||||||||||||| Sbjct: 30172 ggaggagaggggaggagatgg 30152
>gb|AC154024.2| Mus musculus 6 BAC RP24-137K15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173257 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ggaggagaggggaggagatgg 131 ||||||||||||||||||||| Sbjct: 32722 ggaggagaggggaggagatgg 32742
>gb|AY106142.1| Zea mays PCO072430 mRNA sequence Length = 554 Score = 42.1 bits (21), Expect = 5.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1153 accaagtgtcttgaccttcaatttacactttgatgtttacttcat 1197 ||||| |||||||||||| ||| ||| ||||||||||| ||||| Sbjct: 327 accaattgtcttgaccttgaatggacattttgatgtttatttcat 371
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 134 gtggtgaaggcggcgcagctgtcgg 158 ||||||| ||||||||||||||||| Sbjct: 172371 gtggtgacggcggcgcagctgtcgg 172347
>emb|AL806521.9| Mouse DNA sequence from clone RP23-385N7 on chromosome 4, complete sequence Length = 187066 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 cgccggaggagaggggaggag 127 ||||||||||||||||||||| Sbjct: 159337 cgccggaggagaggggaggag 159317 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 205,487,941 Number of extensions: 10775085 Number of successful extensions: 223711 Number of sequences better than 10.0: 112 Number of HSP's gapped: 223684 Number of HSP's successfully gapped: 193 Length of query: 1345 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1322 Effective length of database: 18,503,978,556 Effective search space: 24462259651032 Effective search space used: 24462259651032 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
